View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17300_high_7 (Length: 202)
Name: NF17300_high_7
Description: NF17300
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17300_high_7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 23 - 202
Target Start/End: Original strand, 1807202 - 1807383
Alignment:
| Q |
23 |
aatctaaaaaacctta---atgtaagatatataacaccatatcaatgaaaaacaatgaatggtcacgacagagtagtcaaaataaaattgtagtgcataa |
119 |
Q |
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| T |
1807202 |
aatctaaaaaaccttattaatataagatatataacaccatatcaatgaaaaacaatgaacggtcacgacagagtagtgaaaataaaattgtagtgcataa |
1807301 |
T |
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| Q |
120 |
gttttaactaaatgaaaaagaaaatgcaatcaactccatcgaaaaatttcatctctacataatcaaaggcagcggcttcgaat |
202 |
Q |
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| T |
1807302 |
gttt-aactaaataaaaaagaaaatgcaatcaactccatcgaaaaatttcatctctacataatcaaaggcagcggcttcgaat |
1807383 |
T |
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