View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17302_high_10 (Length: 445)

Name: NF17302_high_10
Description: NF17302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17302_high_10
NF17302_high_10
[»] chr1 (43 HSPs)
chr1 (19-394)||(34714291-34714666)
chr1 (19-314)||(34710595-34710889)
chr1 (327-393)||(8197019-8197085)
chr1 (327-393)||(34725212-34725278)
chr1 (328-393)||(20004208-20004273)
chr1 (328-393)||(46991781-46991846)
chr1 (328-393)||(22930183-22930248)
chr1 (328-393)||(32632672-32632737)
chr1 (328-393)||(47214488-47214553)
chr1 (328-391)||(18944620-18944683)
chr1 (330-393)||(40424721-40424784)
chr1 (327-393)||(14617014-14617080)
chr1 (327-393)||(27201623-27201689)
chr1 (332-393)||(19414420-19414481)
chr1 (327-392)||(19932869-19932934)
chr1 (328-393)||(38478396-38478461)
chr1 (328-393)||(45812651-45812716)
chr1 (328-393)||(46248069-46248134)
chr1 (349-393)||(20036218-20036262)
chr1 (350-393)||(18724661-18724704)
chr1 (346-393)||(27474276-27474323)
chr1 (347-393)||(6925096-6925142)
chr1 (331-393)||(25290143-25290205)
chr1 (91-176)||(40690062-40690150)
chr1 (328-393)||(4430142-4430207)
chr1 (333-390)||(18742080-18742137)
chr1 (346-394)||(23768435-23768483)
chr1 (350-393)||(2435903-2435946)
chr1 (350-393)||(2436009-2436052)
chr1 (346-393)||(30395844-30395891)
chr1 (350-393)||(35117884-35117927)
chr1 (346-393)||(41319922-41319969)
chr1 (328-393)||(10668197-10668267)
chr1 (336-394)||(33222969-33223027)
chr1 (349-393)||(6983925-6983969)
chr1 (353-393)||(9939463-9939503)
chr1 (353-393)||(22327101-22327141)
chr1 (350-390)||(52910216-52910256)
chr1 (350-393)||(10378841-10378884)
chr1 (350-393)||(50760342-50760385)
chr1 (351-393)||(25468379-25468421)
chr1 (351-387)||(44485231-44485267)
chr1 (333-393)||(45402077-45402136)
[»] chr5 (25 HSPs)
chr5 (326-393)||(37024670-37024737)
chr5 (327-393)||(38879534-38879600)
chr5 (325-393)||(22600405-22600473)
chr5 (327-393)||(41014272-41014338)
chr5 (331-393)||(43334159-43334221)
chr5 (328-393)||(1565385-1565450)
chr5 (328-393)||(24448844-24448909)
chr5 (328-393)||(35710267-35710332)
chr5 (331-393)||(4619222-4619284)
chr5 (328-393)||(8170098-8170163)
chr5 (326-393)||(23974733-23974799)
chr5 (349-393)||(27328727-27328771)
chr5 (346-393)||(22861782-22861829)
chr5 (350-393)||(39079882-39079925)
chr5 (350-393)||(39301099-39301142)
chr5 (331-393)||(17419871-17419933)
chr5 (333-393)||(31299591-31299651)
chr5 (358-393)||(1850624-1850659)
chr5 (326-393)||(22187237-22187304)
chr5 (350-393)||(28516550-28516593)
chr5 (363-393)||(32703413-32703443)
chr5 (329-393)||(2838733-2838798)
chr5 (349-390)||(31362454-31362495)
chr5 (354-393)||(12006445-12006485)
chr5 (328-384)||(19438703-19438759)
[»] chr8 (31 HSPs)
chr8 (321-393)||(17823523-17823595)
chr8 (326-393)||(28817742-28817809)
chr8 (326-393)||(30454211-30454278)
chr8 (326-393)||(36720748-36720815)
chr8 (328-393)||(12670364-12670429)
chr8 (328-393)||(24245405-24245470)
chr8 (326-393)||(18164875-18164942)
chr8 (327-393)||(39461112-39461178)
chr8 (328-393)||(20869612-20869677)
chr8 (328-391)||(35261633-35261696)
chr8 (327-393)||(2626472-2626538)
chr8 (327-393)||(13160655-13160721)
chr8 (328-393)||(7136645-7136710)
chr8 (350-393)||(20284189-20284232)
chr8 (350-393)||(21070818-21070861)
chr8 (346-393)||(28407388-28407435)
chr8 (328-393)||(29521801-29521866)
chr8 (328-393)||(44530103-44530168)
chr8 (329-393)||(11748254-11748318)
chr8 (328-392)||(45071219-45071283)
chr8 (327-393)||(6760776-6760841)
chr8 (328-393)||(26954086-26954151)
chr8 (346-393)||(8897880-8897927)
chr8 (346-393)||(25250494-25250541)
chr8 (350-393)||(42083815-42083858)
chr8 (350-393)||(44781622-44781665)
chr8 (356-393)||(31457155-31457192)
chr8 (350-390)||(11001069-11001109)
chr8 (350-390)||(22598133-22598173)
chr8 (351-391)||(24365178-24365218)
chr8 (353-393)||(35105902-35105942)
[»] chr4 (42 HSPs)
chr4 (326-394)||(6430740-6430808)
chr4 (328-395)||(23501747-23501814)
chr4 (327-393)||(48598939-48599005)
chr4 (328-393)||(47528644-47528709)
chr4 (326-393)||(20224936-20225003)
chr4 (327-393)||(5306779-5306845)
chr4 (327-393)||(5648212-5648278)
chr4 (328-393)||(11054262-11054327)
chr4 (331-390)||(5313113-5313172)
chr4 (319-393)||(13256513-13256587)
chr4 (327-393)||(14590790-14590856)
chr4 (331-393)||(16911519-16911581)
chr4 (327-393)||(30639333-30639399)
chr4 (328-393)||(37494805-37494870)
chr4 (350-393)||(487251-487294)
chr4 (346-393)||(16408719-16408766)
chr4 (331-390)||(17315417-17315476)
chr4 (347-393)||(44363248-44363294)
chr4 (328-393)||(10660358-10660423)
chr4 (328-393)||(10874503-10874568)
chr4 (328-393)||(21646918-21646983)
chr4 (350-393)||(42164264-42164307)
chr4 (350-393)||(43035224-43035267)
chr4 (347-393)||(40915802-40915848)
chr4 (328-385)||(20405047-20405104)
chr4 (349-393)||(19027823-19027867)
chr4 (352-392)||(23580325-23580365)
chr4 (350-393)||(35567146-35567189)
chr4 (350-393)||(47441646-47441689)
chr4 (350-393)||(54730225-54730268)
chr4 (351-393)||(3580952-3580994)
chr4 (357-391)||(7385594-7385628)
chr4 (363-393)||(25463111-25463141)
chr4 (333-387)||(30352713-30352767)
chr4 (355-393)||(39077910-39077948)
chr4 (350-392)||(54966997-54967039)
chr4 (353-394)||(30496435-30496476)
chr4 (352-393)||(30690299-30690340)
chr4 (328-385)||(55766590-55766647)
chr4 (350-390)||(12257712-12257752)
chr4 (357-393)||(41018909-41018945)
chr4 (353-393)||(49938706-49938746)
[»] chr2 (40 HSPs)
chr2 (326-393)||(14530270-14530337)
chr2 (327-393)||(23397719-23397785)
chr2 (328-393)||(12024034-12024099)
chr2 (320-393)||(25079834-25079907)
chr2 (327-393)||(21779375-21779441)
chr2 (328-393)||(8455432-8455497)
chr2 (328-393)||(17705449-17705514)
chr2 (329-393)||(10543653-10543717)
chr2 (329-393)||(24200741-24200805)
chr2 (328-393)||(5840982-5841047)
chr2 (330-390)||(11514392-11514452)
chr2 (346-393)||(7214506-7214553)
chr2 (346-393)||(17667974-17668021)
chr2 (331-394)||(25249852-25249915)
chr2 (330-392)||(19977831-19977893)
chr2 (327-393)||(22371010-22371076)
chr2 (349-394)||(40416986-40417031)
chr2 (346-393)||(17623536-17623583)
chr2 (346-393)||(17896231-17896278)
chr2 (346-393)||(27573593-27573640)
chr2 (349-392)||(44643497-44643540)
chr2 (351-393)||(99379-99421)
chr2 (352-390)||(5450263-5450301)
chr2 (339-393)||(45235934-45235988)
chr2 (350-394)||(21377188-21377232)
chr2 (326-374)||(39189556-39189604)
chr2 (348-392)||(39914423-39914467)
chr2 (350-390)||(44521492-44521532)
chr2 (345-393)||(44604825-44604873)
chr2 (328-390)||(9671134-9671197)
chr2 (354-393)||(17380352-17380391)
chr2 (350-393)||(33795261-33795304)
chr2 (329-379)||(14544018-14544068)
chr2 (363-393)||(19614981-19615011)
chr2 (363-393)||(25641491-25641521)
chr2 (352-393)||(31158557-31158598)
chr2 (351-392)||(34752779-34752820)
chr2 (333-370)||(39499353-39499390)
chr2 (365-393)||(10546153-10546181)
chr2 (350-393)||(35017793-35017837)
[»] chr7 (47 HSPs)
chr7 (327-393)||(42805477-42805543)
chr7 (327-393)||(48735237-48735303)
chr7 (328-393)||(7193039-7193104)
chr7 (328-393)||(47077969-47078034)
chr7 (326-393)||(32758213-32758280)
chr7 (327-393)||(42495951-42496017)
chr7 (328-393)||(21172123-21172188)
chr7 (328-393)||(42798623-42798688)
chr7 (326-393)||(2541135-2541203)
chr7 (327-392)||(42476826-42476891)
chr7 (328-393)||(43557426-43557491)
chr7 (328-393)||(46354148-46354213)
chr7 (329-393)||(18326989-18327053)
chr7 (346-393)||(10693187-10693234)
chr7 (346-393)||(11617704-11617751)
chr7 (346-393)||(19427005-19427052)
chr7 (327-393)||(35334930-35334996)
chr7 (329-390)||(5180276-5180337)
chr7 (332-393)||(14732938-14732999)
chr7 (328-393)||(22699086-22699151)
chr7 (348-393)||(33872025-33872070)
chr7 (349-393)||(13805077-13805121)
chr7 (350-394)||(40463853-40463897)
chr7 (346-393)||(7794622-7794669)
chr7 (350-393)||(19265791-19265834)
chr7 (346-393)||(27629606-27629653)
chr7 (331-382)||(29140487-29140538)
chr7 (350-393)||(48123600-48123643)
chr7 (351-393)||(6736867-6736909)
chr7 (327-393)||(28078247-28078313)
chr7 (350-393)||(29907393-29907438)
chr7 (356-393)||(42391214-42391251)
chr7 (328-393)||(47716413-47716478)
chr7 (353-393)||(11741774-11741814)
chr7 (349-393)||(39123865-39123909)
chr7 (350-393)||(14099122-14099165)
chr7 (350-393)||(14409139-14409182)
chr7 (350-393)||(19266426-19266469)
chr7 (331-390)||(25198679-25198738)
chr7 (350-393)||(28362261-28362304)
chr7 (327-393)||(12473257-12473323)
chr7 (350-392)||(16341254-16341296)
chr7 (327-393)||(34626323-34626389)
chr7 (346-390)||(1424029-1424073)
chr7 (350-382)||(3469306-3469338)
chr7 (349-393)||(7644931-7644975)
chr7 (329-393)||(8149062-8149126)
[»] chr3 (31 HSPs)
chr3 (327-393)||(8247805-8247871)
chr3 (328-393)||(10870067-10870132)
chr3 (325-393)||(7697001-7697069)
chr3 (329-393)||(29366838-29366902)
chr3 (328-393)||(13730720-13730785)
chr3 (328-393)||(46421153-46421218)
chr3 (328-393)||(52926326-52926391)
chr3 (326-393)||(16735415-16735482)
chr3 (327-393)||(1217065-1217131)
chr3 (327-393)||(40272928-40272994)
chr3 (328-393)||(4495780-4495845)
chr3 (326-393)||(5173836-5173904)
chr3 (327-393)||(13628908-13628975)
chr3 (346-393)||(26869701-26869748)
chr3 (327-393)||(9607178-9607244)
chr3 (327-393)||(39203491-39203557)
chr3 (326-393)||(22609741-22609807)
chr3 (350-393)||(26573125-26573168)
chr3 (350-393)||(53062036-53062079)
chr3 (347-393)||(22123031-22123077)
chr3 (351-393)||(34420760-34420802)
chr3 (350-392)||(45620946-45620988)
chr3 (328-393)||(6411937-6412002)
chr3 (328-393)||(12914151-12914216)
chr3 (350-390)||(35417914-35417954)
chr3 (354-393)||(30928263-30928302)
chr3 (363-393)||(516420-516450)
chr3 (351-393)||(25944468-25944510)
chr3 (329-382)||(25517300-25517353)
chr3 (363-392)||(45139595-45139624)
chr3 (327-393)||(12525385-12525448)
[»] chr6 (22 HSPs)
chr6 (328-393)||(1346918-1346983)
chr6 (331-393)||(12063424-12063486)
chr6 (328-393)||(1354871-1354936)
chr6 (330-393)||(3815193-3815256)
chr6 (346-393)||(12222033-12222080)
chr6 (327-393)||(8409196-8409262)
chr6 (346-393)||(2166528-2166575)
chr6 (346-393)||(2178161-2178208)
chr6 (350-393)||(9161099-9161142)
chr6 (350-393)||(13905095-13905138)
chr6 (327-393)||(29355973-29356040)
chr6 (328-394)||(1941809-1941875)
chr6 (339-393)||(14553477-14553530)
chr6 (327-393)||(14975196-14975262)
chr6 (331-392)||(32728273-32728334)
chr6 (328-393)||(33922944-33923009)
chr6 (346-394)||(8417444-8417492)
chr6 (332-392)||(20400625-20400685)
chr6 (346-381)||(24734605-24734640)
chr6 (328-390)||(6024187-6024249)
chr6 (328-390)||(15866156-15866218)
chr6 (327-384)||(19649292-19649349)
[»] scaffold0057 (3 HSPs)
scaffold0057 (327-394)||(24882-24949)
scaffold0057 (349-392)||(46806-46849)
scaffold0057 (351-393)||(46999-47041)
[»] scaffold0024 (1 HSPs)
scaffold0024 (327-393)||(83828-83894)
[»] scaffold0168 (1 HSPs)
scaffold0168 (328-393)||(30533-30598)
[»] scaffold0187 (4 HSPs)
scaffold0187 (346-393)||(10164-10211)
scaffold0187 (346-393)||(20492-20539)
scaffold0187 (326-394)||(8897-8965)
scaffold0187 (326-394)||(19225-19293)
[»] scaffold0005 (1 HSPs)
scaffold0005 (327-393)||(226522-226588)
[»] scaffold0311 (1 HSPs)
scaffold0311 (338-391)||(10774-10827)
[»] scaffold0258 (1 HSPs)
scaffold0258 (330-393)||(13139-13202)
[»] scaffold1176 (1 HSPs)
scaffold1176 (349-393)||(1701-1745)
[»] scaffold0049 (1 HSPs)
scaffold0049 (333-393)||(58936-58996)
[»] scaffold0254 (1 HSPs)
scaffold0254 (346-393)||(4129-4176)
[»] scaffold0223 (1 HSPs)
scaffold0223 (346-393)||(11104-11150)
[»] scaffold0036 (1 HSPs)
scaffold0036 (339-393)||(35134-35189)
[»] scaffold0116 (1 HSPs)
scaffold0116 (348-390)||(8865-8907)
[»] scaffold0194 (1 HSPs)
scaffold0194 (352-393)||(24642-24683)


Alignment Details
Target: chr1 (Bit Score: 332; Significance: 0; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 19 - 394
Target Start/End: Original strand, 34714291 - 34714666
Alignment:
Q  19 caccatgcacctgtggagacaacctcatcgacaccaatggctttgcaaccagatgaagaagatgaagaaccgcctagaaagaaaatgaatgtctctttgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  34714291 caccatgcacctgtggagacaacctcatcgacaccaatggctttgcaaccagacgaagaagatgaagaaccacctagaaagaaaatgaatgtctctttgg 34714390  T
Q  119 atttggatctcaaccttcctgcagcttaagaagatcaaagagagttcaagtttgccttgtcattcaagcaacaacaaacaagtcttgttttctctacacc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34714391 atttggatctcaaccttcctgcagcttaagaagatcaaagagagttcaagtttgccttgtcattcaagcaacaacaaacaagtcttgttttctctacacc 34714490  T
Q  219 gtctttgatggattggcattaaagataggtgacaaggttttagtttgggattcacaaaactggatttacattcagttctcaaatatatttgctgtattat 318  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||    
T  34714491 gtctttgatggattggcattaatgataggtgacaaggttttagtttgggattcacaaaactggatttacattcagttctcaaatatatttgttgtactat 34714590  T
Q  319 tttgttcttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
     ||||||||||||||||| ||||| | |||||||||||||||| |||||||| |||||||||||||||||||||||    
T  34714591 cttgttcttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtca 34714666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 19 - 314
Target Start/End: Original strand, 34710595 - 34710889
Alignment:
Q  19 caccatgcacctgtggagacaacctcatcgacaccaatggctttgcaaccagatgaagaagatgaagaaccgcctagaaagaaaatgaatgtctctttgg 118  Q
    ||||||||||| ||||||  ||||||||||||||||||||||| | ||||||| ||||||||||||||||| |||  |||||||||||||||| ||||||    
T  34710595 caccatgcaccggtggaggaaacctcatcgacaccaatggcttcggaaccagacgaagaagatgaagaaccacctgcaaagaaaatgaatgtccctttgg 34710694  T
Q  119 atttggatctcaaccttcctgcagcttaagaagatcaaagagagttcaagtttgccttgtcattcaagcaacaacaaacaagtcttgttttctctacacc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | |||||| ||| |||| |||||| |||||||||||||||||||||| | ||||    
T  34710695 atttggatctcaaccttcctgcagcttaagaagatcaaagagaatcctagtttgtcttatcatccaagcatcaacaaacaagtcttgttttctgtgcacc 34710794  T
Q  219 gtctttgatggattggcattaaagataggtgacaaggttttagtttgggattcacaaaactggatttacattcagttctcaaatatatttgctgta 314  Q
      ||| | ||||||| |||||  || | ||||||| ||||||||||||||||||| ||||||| |||||| ||| |||| ||||||||||| ||||    
T  34710795 tgcttgggtggattgtcattactgacaagtgacaaagttttagtttgggattcaccaaactgggtttaca-tcatttcttaaatatatttgttgta 34710889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 8197019 - 8197085
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||    
T  8197019 tgaggggtaaccttggtgcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 8197085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 34725278 - 34725212
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  34725278 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 34725212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 20004273 - 20004208
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  20004273 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 20004208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 46991781 - 46991846
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  46991781 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 46991846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 22930248 - 22930183
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  22930248 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 22930183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 32632737 - 32632672
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||| ||||||||||||||||||||||||||    
T  32632737 gaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtc 32632672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 47214488 - 47214553
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||  |||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  47214488 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 47214553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 391
Target Start/End: Original strand, 18944620 - 18944683
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaag 391  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||| ||||||||    
T  18944620 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaag 18944683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 40424721 - 40424784
Alignment:
Q  330 ggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||| ||||| | |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  40424721 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttcaagtc 40424784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 14617014 - 14617080
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | ||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  14617014 tgaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtc 14617080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 27201623 - 27201689
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||| | |||| ||||||||||||| ||||||||||||||||||| |||||||||||    
T  27201623 tgaggggtaaccttagcgtaaatggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 27201689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 393
Target Start/End: Original strand, 19414420 - 19414481
Alignment:
Q  332 ggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||| ||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  19414420 ggtaaccttggcgtaattggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtc 19414481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 392
Target Start/End: Complemental strand, 19932934 - 19932869
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    |||||||| | ||||| | |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  19932934 tgaggggttaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt 19932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 38478461 - 38478396
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||| ||||| ||||| |||||||||||||||||||||||||||||||    
T  38478461 gaggggtaaccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtc 38478396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 45812716 - 45812651
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | ||||| |||||||||| |||||||||||||||||||| ||||||||||    
T  45812716 gaggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 45812651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 46248134 - 46248069
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| |||||   |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  46248134 gaggggtaaccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtc 46248069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 349 - 393
Target Start/End: Original strand, 20036218 - 20036262
Alignment:
Q  349 tggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  20036218 tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 20036262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 18724704 - 18724661
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  18724704 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 18724661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 27474276 - 27474323
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  27474276 aactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 27474323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 393
Target Start/End: Original strand, 6925096 - 6925142
Alignment:
Q  347 actggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  6925096 actggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 6925142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 25290143 - 25290205
Alignment:
Q  331 gggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| ||||| | ||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  25290143 gggtaaccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtc 25290205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 40690062 - 40690150
Alignment:
Q  91 cctagaaagaaaatgaatgtct---ctttggatttggatctcaaccttcctgcagcttaagaagatcaaagagagttcaagtttgcctt 176  Q
    ||||||||||||| |||||| |   ||||||||||||||||||||||||||||| || |||| ||||| ||||| |  |||||||||||    
T  40690062 cctagaaagaaaaggaatgttttgtctttggatttggatctcaaccttcctgcacctgaagatgatcatagagaatctaagtttgcctt 40690150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 4430207 - 4430142
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||| ||||||||| | | |||||||||||||| ||||||||||| ||||||||||||| |||||    
T  4430207 gagggttaatcttggcgcagctggtaaagttgttgtcatgtgactggaaggtcacgggtttaagtc 4430142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 390
Target Start/End: Complemental strand, 18742137 - 18742080
Alignment:
Q  333 gtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||| ||||| | |||||||||||||||| ||||||||||||||||||| ||||||||    
T  18742137 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaa 18742080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 394
Target Start/End: Complemental strand, 23768483 - 23768435
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||||||    
T  23768483 aactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtca 23768435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 2435946 - 2435903
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||| |||||||||||||||||||||||||||    
T  2435946 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtc 2435903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 2436052 - 2436009
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||| |||||||||||||||||||||||||||    
T  2436052 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtc 2436009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 30395891 - 30395844
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| ||||||||||  |||||||||||||||||||    
T  30395891 aactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtc 30395844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 35117927 - 35117884
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||| |||||||||||||||||||||||||||    
T  35117927 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtc 35117884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 41319969 - 41319922
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| |||||||||||||||||||| |||| |||||    
T  41319969 aactggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtc 41319922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 10668197 - 10668267
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatc-----atgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| ||     |||||||||||||||||||||||||||||    
T  10668197 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtc 10668267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 394
Target Start/End: Original strand, 33222969 - 33223027
Alignment:
Q  336 atcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
    ||||||| | ||| |||||||||||| |||||||||||||||||||||| || ||||||    
T  33222969 atcttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtca 33223027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 393
Target Start/End: Complemental strand, 6983969 - 6983925
Alignment:
Q  349 tggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||    
T  6983969 tggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtc 6983925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 393
Target Start/End: Original strand, 9939463 - 9939503
Alignment:
Q  353 aaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  9939463 aaagttgttgtcatgtgactgaaaggtcacgagttcaagtc 9939503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 393
Target Start/End: Original strand, 22327101 - 22327141
Alignment:
Q  353 aaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  22327101 aaagttgttgtcatgtgactgaaaggtcgcgggttcaagtc 22327141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 52910216 - 52910256
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||||||||||| |||||||||||||||||||| |||||||    
T  52910216 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaa 52910256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 10378884 - 10378841
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||    
T  10378884 ggtaaagttgttgtcacgtgactgaaaggttacgggttcaagtc 10378841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 50760385 - 50760342
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||    
T  50760385 ggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtc 50760342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 393
Target Start/End: Complemental strand, 25468421 - 25468379
Alignment:
Q  351 gtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| |||||||| |||||||||| |||||||||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtc 25468379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 44485267 - 44485231
Alignment:
Q  351 gtaaagttgttatcatgtgactgaaaggtcacgggtt 387  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  44485267 gtaaagttgttgtcatgtgattgaaaggtcacgggtt 44485231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 45402077 - 45402136
Alignment:
Q  333 gtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||| ||||| | |||||||||||||||| |||||||| || ||||| |||||||||||||    
T  45402077 gtaaccttggcgcaactggtaaagttgttgtcatgtga-tggaaggtaacgggttcaagtc 45402136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 326 - 393
Target Start/End: Complemental strand, 37024737 - 37024670
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  37024737 ttgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 37024670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 38879534 - 38879600
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  38879534 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 38879600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 325 - 393
Target Start/End: Original strand, 22600405 - 22600473
Alignment:
Q  325 cttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||||  |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  22600405 cttgaggggtaaccttgacgtaactggtaaagttgttatcatgtgactggaaggttacgggttcaagtc 22600473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 41014272 - 41014338
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  41014272 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 41014338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 43334159 - 43334221
Alignment:
Q  331 gggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  43334159 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 43334221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 1565385 - 1565450
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  1565385 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtc 1565450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 24448844 - 24448909
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  24448844 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 24448909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 35710267 - 35710332
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  35710267 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtc 35710332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 393
Target Start/End: Complemental strand, 4619284 - 4619222
Alignment:
Q  331 gggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| ||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  4619284 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 4619222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 8170163 - 8170098
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||| ||| ||||| | |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  8170163 gagggctaaccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtc 8170098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 393
Target Start/End: Original strand, 23974733 - 23974799
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||||| | ||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  23974733 ttgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 23974799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 393
Target Start/End: Original strand, 27328727 - 27328771
Alignment:
Q  349 tggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  27328727 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 27328771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 22861829 - 22861782
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  22861829 aactgataaagttgttgtcatgtgactgaaaggtcacggattcaagtc 22861782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 39079925 - 39079882
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||||||||| |||||||||||||||||||||    
T  39079925 ggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtc 39079882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 39301099 - 39301142
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| |||||| ||||||||||||||||||||||||    
T  39301099 ggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtc 39301142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 17419871 - 17419933
Alignment:
Q  331 gggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||| |||| |||||||||||| ||||| | ||||||||||||||| ||| |||||||||    
T  17419871 gggtaattttggcgtaactggtaaaattgttgtaatgtgactgaaaggttacgagttcaagtc 17419933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 31299591 - 31299651
Alignment:
Q  333 gtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||| ||||||| |||||||||||||||| |||||||||| | |||||||  |||||||||    
T  31299591 gtaaccttggtgcaactggtaaagttgttgtcatgtgacttacaggtcactagttcaagtc 31299651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 358 - 393
Target Start/End: Original strand, 1850624 - 1850659
Alignment:
Q  358 tgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||| |||||||||||||||||||||||||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtc 1850659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 393
Target Start/End: Original strand, 22187237 - 22187304
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||  |||| | |||| ||||||||||| |||| ||||||||||||||| |||| |||||    
T  22187237 ttgaggggtaactttggcgcaactagtaaagttgttgtcatttgactgaaaggtcaccggtttaagtc 22187304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 28516593 - 28516550
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||| ||| |||||||||||||||||||||||    
T  28516593 ggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtc 28516550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 393
Target Start/End: Original strand, 32703413 - 32703443
Alignment:
Q  363 tcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||||||||||||||||||    
T  32703413 tcatgtgactgaaaggtcacgggttcaagtc 32703443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 393
Target Start/End: Original strand, 2838733 - 2838798
Alignment:
Q  329 aggggtaatcttggtgtaactggtaaagttgttatcatgtgactg-aaaggtcacgggttcaagtc 393  Q
    |||||||| ||||| | ||| |||||||||||| ||||||||||| |||||||||| | |||||||    
T  2838733 aggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtc 2838798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 390
Target Start/End: Complemental strand, 31362495 - 31362454
Alignment:
Q  349 tggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    ||||||||||||| |||||||| || ||||||||||||||||    
T  31362495 tggtaaagttgttgtcatgtgattggaaggtcacgggttcaa 31362454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 393
Target Start/End: Complemental strand, 12006485 - 12006445
Alignment:
Q  354 aagttgttatcatgtgactgaaaggtcac-gggttcaagtc 393  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  12006485 aagttgttgtcatgtgactgaaaggtcacggggttcaagtc 12006445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 384
Target Start/End: Original strand, 19438703 - 19438759
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgg 384  Q
    ||||||||| ||||| | |||||||||||||||| |||| ||||| |||| ||||||    
T  19438703 gaggggtaaccttggcgcaactggtaaagttgttgtcatatgactaaaagatcacgg 19438759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 321 - 393
Target Start/End: Original strand, 17823523 - 17823595
Alignment:
Q  321 tgttcttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||| ||||||||||||||||| | |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  17823523 tgtttttgaggggtaatcttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtc 17823595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 393
Target Start/End: Complemental strand, 28817809 - 28817742
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  28817809 ttgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 28817742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 393
Target Start/End: Complemental strand, 30454278 - 30454211
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  30454278 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 30454211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 393
Target Start/End: Original strand, 36720748 - 36720815
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  36720748 ttgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 36720815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 12670429 - 12670364
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  12670429 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 12670364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 24245405 - 24245470
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  24245405 gaggggtaaccttggggcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 24245470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 393
Target Start/End: Complemental strand, 18164942 - 18164875
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||||||||| | ||| ||| |||||||| |||||||||||||||||||||||||||||||    
T  18164942 ttgaggggtaatcttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 18164875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 39461178 - 39461112
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||| ||||| |||||||||||||||||||||||||    
T  39461178 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtc 39461112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 20869677 - 20869612
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||| ||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  20869677 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 20869612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 328 - 391
Target Start/End: Original strand, 35261633 - 35261696
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaag 391  Q
    ||||||||| ||||| | |||||||||||||||| ||||||||||| |||||||||||||||||    
T  35261633 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaag 35261696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 2626472 - 2626538
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | || ||||||||||||| ||||||||| |||||||||||||||||||||    
T  2626472 tgaggggtaaccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtc 2626538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 13160655 - 13160721
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| || || | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  13160655 tgaggggtaacctcggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtc 13160721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 7136710 - 7136645
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| ||||||||||| ||||||| |||||||||||    
T  7136710 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtc 7136645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 20284232 - 20284189
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  20284232 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 20284189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 21070861 - 21070818
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  21070861 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 21070818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 28407388 - 28407435
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  28407388 aactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 28407435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 29521866 - 29521801
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | ||||| |||||||||| || |||||||| |||||||||||||||||||    
T  29521866 gaggggtaaccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtc 29521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 44530103 - 44530168
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||| | ||||||||||  |||||||||||||||||||    
T  44530103 gaggggtaaccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtc 44530168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 329 - 393
Target Start/End: Original strand, 11748254 - 11748318
Alignment:
Q  329 aggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||  |||||| ||||||| || ||||| |||||||||||||| ||||||||||||||||    
T  11748254 aggggtaactttggtgcaactggtgaaattgttgtcatgtgactgaaatgtcacgggttcaagtc 11748318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 45071219 - 45071283
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    ||||||||| ||||| |  ||||||||||||||| |||||||| || ||||||||||||||||||    
T  45071219 gaggggtaaccttggcgatactggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagt 45071283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 6760776 - 6760841
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||| |||| |||||  |||||||||||||||||||    
T  6760776 tgaggggtaa-cttggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtc 6760841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 26954086 - 26954151
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||  |||| |||| ||||||||||||| |||||||| |  |||||||||||||||||||    
T  26954086 gaggggtaactttggcgtaattggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtc 26954151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 8897927 - 8897880
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| ||||||||| | ||||||||||||| |||||    
T  8897927 aactggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtc 8897880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 25250494 - 25250541
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| ||||||||||| ||||||||  |||||||||    
T  25250494 aactggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtc 25250541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 42083858 - 42083815
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| ||||| ||| |||||||||||||||||||||||||||    
T  42083858 ggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtc 42083815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 44781665 - 44781622
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||| ||||||||||| |||||||||||||||    
T  44781665 ggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtc 44781622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 393
Target Start/End: Original strand, 31457155 - 31457192
Alignment:
Q  356 gttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtc 31457192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 11001109 - 11001069
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||||||||||| |||||||| ||||||||| |||||||||    
T  11001109 ggtaaagttgttgtcatgtgattgaaaggtcgcgggttcaa 11001069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 22598133 - 22598173
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||||||||||| |||  |||||||||||||||||||||||    
T  22598133 ggtaaagttgttgtcacatgactgaaaggtcacgggttcaa 22598173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 391
Target Start/End: Complemental strand, 24365218 - 24365178
Alignment:
Q  351 gtaaagttgttatcatgtgactgaaaggtcacgggttcaag 391  Q
    ||||||||||| |||||||||| ||| ||||||||||||||    
T  24365218 gtaaagttgttgtcatgtgactaaaatgtcacgggttcaag 24365178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 393
Target Start/End: Original strand, 35105902 - 35105942
Alignment:
Q  353 aaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||| ||| |||||||||||||||||||||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtc 35105942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 394
Target Start/End: Complemental strand, 6430808 - 6430740
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
    ||||||||||| ||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6430808 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtca 6430740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 395
Target Start/End: Original strand, 23501747 - 23501814
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtcac 395  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23501747 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcac 23501814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 48599005 - 48598939
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  48599005 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 48598939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 47528709 - 47528644
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  47528709 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 47528644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 393
Target Start/End: Original strand, 20224936 - 20225003
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||||| | |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  20224936 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 20225003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 5306845 - 5306779
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||| | |||||||||||||||||||||||||||||||    
T  5306845 tgaggggtaaccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtc 5306779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 5648212 - 5648278
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  5648212 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtc 5648278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 11054327 - 11054262
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||  |||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  11054327 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 11054262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 5313172 - 5313113
Alignment:
Q  331 gggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||||||||    
T  5313172 gggtaaccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaa 5313113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 393
Target Start/End: Complemental strand, 13256587 - 13256513
Alignment:
Q  319 tttgttcttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| | ||||||||| ||||||| |||||||||||||||| ||||||||||| |||||||  ||||||||||    
T  13256587 tttgttttagaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcataggttcaagtc 13256513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 14590790 - 14590856
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||| ||||| ||||| | |||||||||||||||| |||||||||||||||||||||| ||||||||    
T  14590790 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 14590856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 16911519 - 16911581
Alignment:
Q  331 gggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| ||||| | |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  16911519 gggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtc 16911581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 30639333 - 30639399
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||| || ||||||||||||||||| ||||||||||    
T  30639333 tgaggggtaaccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtc 30639399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 37494805 - 37494870
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||||| ||||||||||||||||  |||| |||||||||||||| ||||||||||    
T  37494805 gaggggtaaccttggtgcaactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtc 37494870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 487294 - 487251
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  487294 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 487251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 16408766 - 16408719
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  16408766 aactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 16408719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 390
Target Start/End: Complemental strand, 17315476 - 17315417
Alignment:
Q  331 gggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||||| ||||| | ||| |||||||||||| ||||||||||||||||||||||||||||    
T  17315476 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaa 17315417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 347 - 393
Target Start/End: Complemental strand, 44363294 - 44363248
Alignment:
Q  347 actggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  44363294 actggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtc 44363248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 10660358 - 10660423
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| ||||||||||||||||| ||  |||||||||    
T  10660358 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtc 10660423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 10874503 - 10874568
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| ||||||||||||||||| ||  |||||||||    
T  10874503 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtc 10874568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 21646918 - 21646983
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||| ||| ||||| | |||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  21646918 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtc 21646983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 42164307 - 42164264
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| ||||| |||||||||||||||||||||||||||||||    
T  42164307 ggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtc 42164264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 43035224 - 43035267
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||| |||||||||||||||||||||||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtc 43035267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 393
Target Start/End: Original strand, 40915802 - 40915848
Alignment:
Q  347 actggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||||    
T  40915802 actggtaaagttgttgtcatgtgactataaggtcacgggttcaagtc 40915848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 20405047 - 20405104
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacggg 385  Q
    ||||||||| ||||  | |||||||||||||||| ||||||||||| |||||||||||    
T  20405047 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactggaaggtcacggg 20405104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 393
Target Start/End: Original strand, 19027823 - 19027867
Alignment:
Q  349 tggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||||    
T  19027823 tggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtc 19027867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 352 - 392
Target Start/End: Complemental strand, 23580365 - 23580325
Alignment:
Q  352 taaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  23580365 taaagttgttgtcacgtgactgaaaggtcacgggttcaagt 23580325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 35567146 - 35567189
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| |||||| |||||||||||| |||||||||||    
T  35567146 ggtaaagttgttgtcatgtaactgaaaggtcatgggttcaagtc 35567189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 47441689 - 47441646
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||| |||||||||||||||| ||||||||||    
T  47441689 ggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtc 47441646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 54730225 - 54730268
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| |||||||||  ||||||||||||||||||||    
T  54730225 ggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtc 54730268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 393
Target Start/End: Complemental strand, 3580994 - 3580952
Alignment:
Q  351 gtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| |||||||||||||| |||||| |||||||||    
T  3580994 gtaaagttgttgtcatgtgactgaaaagtcacgagttcaagtc 3580952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 391
Target Start/End: Complemental strand, 7385628 - 7385594
Alignment:
Q  357 ttgttatcatgtgactgaaaggtcacgggttcaag 391  Q
    ||||| |||||||||||||||||||||||||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaag 7385594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 393
Target Start/End: Original strand, 25463111 - 25463141
Alignment:
Q  363 tcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||||||||||||||||||    
T  25463111 tcatgtgactgaaaggtcacgggttcaagtc 25463141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 30352767 - 30352713
Alignment:
Q  333 gtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggtt 387  Q
    |||| ||||| | |||||||||||||||| ||| ||||| |||||||||||||||    
T  30352767 gtaaccttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggtt 30352713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 393
Target Start/End: Complemental strand, 39077948 - 39077910
Alignment:
Q  355 agttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtc 39077910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 54966997 - 54967039
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    |||||||||||| ||||||||||||||||||||  ||||||||    
T  54966997 ggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagt 54967039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 394
Target Start/End: Complemental strand, 30496476 - 30496435
Alignment:
Q  353 aaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||    
T  30496476 aaagttgttgtcacgtgactgaaaggtcacgtgttcaagtca 30496435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 393
Target Start/End: Complemental strand, 30690340 - 30690299
Alignment:
Q  352 taaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| ||| ||| |||||||||||||||||||||||||||    
T  30690340 taaagtggttgtcaagtgactgaaaggtcacgggttcaagtc 30690299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 55766647 - 55766590
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacggg 385  Q
    ||||||||| ||||  | |||||||||||||||| ||||||||| | |||||||||||    
T  55766647 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccggaaggtcacggg 55766590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 12257752 - 12257712
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||||||||||| ||| |||| |||||||||||||||||||    
T  12257752 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaa 12257712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 393
Target Start/End: Complemental strand, 41018945 - 41018909
Alignment:
Q  357 ttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtc 41018909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 393
Target Start/End: Complemental strand, 49938746 - 49938706
Alignment:
Q  353 aaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||| |||||||||||||||| ||||||||||    
T  49938746 aaagttgttgtcacgtgactgaaaggtcacaggttcaagtc 49938706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 326 - 393
Target Start/End: Original strand, 14530270 - 14530337
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  14530270 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 14530337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 23397719 - 23397785
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  23397719 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 23397785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 12024099 - 12024034
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  12024099 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 12024034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 393
Target Start/End: Complemental strand, 25079907 - 25079834
Alignment:
Q  320 ttgttcttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||| ||||||||||| ||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  25079907 ttgttgttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 25079834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 21779441 - 21779375
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | ||||||| |||||||| |||||||||||||||||||||||||||||||    
T  21779441 tgaggggtaaccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 21779375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 8455497 - 8455432
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  8455497 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 8455432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 17705449 - 17705514
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||||| |||||||||||||||| ||||||||||  |||||||||||||||||||    
T  17705449 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtc 17705514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 393
Target Start/End: Original strand, 10543653 - 10543717
Alignment:
Q  329 aggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||| ||||| | ||||| |||||||||| |||||||||||||||||||||||||||||||    
T  10543653 aggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 10543717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 329 - 393
Target Start/End: Complemental strand, 24200805 - 24200741
Alignment:
Q  329 aggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||| |||| || |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  24200805 aggggtaaccttgatgcaactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtc 24200741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 5840982 - 5841047
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||||| || || |||||||||| ||||||||||| |||||||||||||||||||    
T  5840982 gaggggtaaccttggtgcaaatgataaagttgttgtcatgtgactggaaggtcacgggttcaagtc 5841047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 390
Target Start/End: Original strand, 11514392 - 11514452
Alignment:
Q  330 ggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    ||||||| ||||| | |||||||||||||||| ||||||||||| ||||||||||||||||    
T  11514392 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaa 11514452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 7214506 - 7214553
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  7214506 aactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 7214553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 17667974 - 17668021
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  17667974 aactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 17668021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 331 - 394
Target Start/End: Complemental strand, 25249915 - 25249852
Alignment:
Q  331 gggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
    |||||| ||||| | || ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  25249915 gggtaaccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtca 25249852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 330 - 392
Target Start/End: Complemental strand, 19977893 - 19977831
Alignment:
Q  330 ggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    ||||||| ||||| | ||||||| |||||||| ||||||||| ||||||||||||||||||||    
T  19977893 ggggtaaccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagt 19977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 22371010 - 22371076
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| |||||   |||||||||||||||| |||||||||||  ||||||||||||||||||    
T  22371010 tgaggggtaaccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtc 22371076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 394
Target Start/End: Complemental strand, 40417031 - 40416986
Alignment:
Q  349 tggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||    
T  40417031 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtca 40416986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 17623536 - 17623583
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  17623536 aactggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtc 17623583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 17896231 - 17896278
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||||||    
T  17896231 aactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtc 17896278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 27573593 - 27573640
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| |||||||||||||||||||  ||||||||||    
T  27573593 aactggtaaagttgttgtcatgtgactgaaaggtcattggttcaagtc 27573640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 349 - 392
Target Start/End: Original strand, 44643497 - 44643540
Alignment:
Q  349 tggtaaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    |||||||||||| |||||||||||||||||||||| ||||||||    
T  44643497 tggtaaagttgtcatcatgtgactgaaaggtcacgtgttcaagt 44643540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 393
Target Start/End: Complemental strand, 99421 - 99379
Alignment:
Q  351 gtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||| |||||||||||||||||||||||||||    
T  99421 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtc 99379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 390
Target Start/End: Original strand, 5450263 - 5450301
Alignment:
Q  352 taaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaa 5450301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 45235988 - 45235934
Alignment:
Q  339 ttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||  ||||||||||| ||||||||||||||| ||||| |||||||||    
T  45235988 ttggtgtaaccagtaaagttgttctcatgtgactgaaagatcacgagttcaagtc 45235934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 394
Target Start/End: Complemental strand, 21377232 - 21377188
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||    
T  21377232 ggtaaagttgttgtcatgtgactgaaaggttacgagttcaagtca 21377188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 374
Target Start/End: Complemental strand, 39189604 - 39189556
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactga 374  Q
    ||||||||||| ||||| | |||||||||||||||| ||||||||||||    
T  39189604 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactga 39189556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 39914467 - 39914423
Alignment:
Q  348 ctggtaaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    |||||||||||||| ||||||||||| ||||||||||| ||||||    
T  39914467 ctggtaaagttgttgtcatgtgactggaaggtcacgggatcaagt 39914423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 390
Target Start/End: Complemental strand, 44521532 - 44521492
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  44521532 ggtaaagttgttatcacgtgactgaaaggtcacgcgttcaa 44521492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 393
Target Start/End: Original strand, 44604825 - 44604873
Alignment:
Q  345 taactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| |||||||||| ||||||||||| |||||||| ||||||||||    
T  44604825 taactgctaaagttgttgtcatgtgactggaaggtcacaggttcaagtc 44604873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 390
Target Start/End: Original strand, 9671134 - 9671197
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgact-gaaaggtcacgggttcaa 390  Q
    ||||||||| ||||| | ||| |||||||||||| |||||||||| |||| |||||||||||||    
T  9671134 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaa 9671197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 393
Target Start/End: Complemental strand, 17380391 - 17380352
Alignment:
Q  354 aagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  17380391 aagttgttgtcatgtgaccgaaaggtcacgggttcaagtc 17380352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 33795261 - 33795304
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||    
T  33795261 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtc 33795304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 14544018 - 14544068
Alignment:
Q  329 aggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggt 379  Q
    |||||||| ||||| | || ||||||||||||| |||||||||||||||||    
T  14544018 aggggtaaccttggcgcaattggtaaagttgttgtcatgtgactgaaaggt 14544068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 393
Target Start/End: Original strand, 19614981 - 19615011
Alignment:
Q  363 tcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||||||||||||||||||    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtc 19615011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 393
Target Start/End: Original strand, 25641491 - 25641521
Alignment:
Q  363 tcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||||||||||||||||||    
T  25641491 tcatgtgactgaaaggtcacgggttcaagtc 25641521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 393
Target Start/End: Complemental strand, 31158598 - 31158557
Alignment:
Q  352 taaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||||||||||||||||| ||||| |||||    
T  31158598 taaagttgttgtcatgtgactgaaaggtcaagggttaaagtc 31158557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 392
Target Start/End: Complemental strand, 34752820 - 34752779
Alignment:
Q  351 gtaaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    ||||| |||||||||||||||||||||||||||  |||||||    
T  34752820 gtaaacttgttatcatgtgactgaaaggtcacgaattcaagt 34752779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 370
Target Start/End: Complemental strand, 39499390 - 39499353
Alignment:
Q  333 gtaatcttggtgtaactggtaaagttgttatcatgtga 370  Q
    |||||||||| | |||||||||||||||||||||||||    
T  39499390 gtaatcttggcgcaactggtaaagttgttatcatgtga 39499353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 393
Target Start/End: Original strand, 10546153 - 10546181
Alignment:
Q  365 atgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||||||||||||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtc 10546181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 35017793 - 35017837
Alignment:
Q  350 ggtaaagttgttatcatgtgac-tgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||||||||| |||||||||||||||| |||||    
T  35017793 ggtaaagttgttgtcatgtgacttgaaaggtcacgggtttaagtc 35017837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 5e-20; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 42805477 - 42805543
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  42805477 tgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 42805543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 48735303 - 48735237
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  48735303 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 48735237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 7193039 - 7193104
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  7193039 gaggggtaaccttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 7193104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 47078034 - 47077969
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  47078034 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 47077969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 326 - 393
Target Start/End: Original strand, 32758213 - 32758280
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||||| | |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  32758213 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 32758280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 42496017 - 42495951
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||| |||| ||||||||||||||||||||||||||    
T  42496017 tgaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtc 42495951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 21172188 - 21172123
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||||| ||||||||||||||||||||||||    
T  21172188 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtc 21172123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 42798623 - 42798688
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  42798623 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 42798688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 326 - 393
Target Start/End: Complemental strand, 2541203 - 2541135
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgact-gaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||||| | |||||||||||||||| |||||||||| |||||||||||||||||||||    
T  2541203 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtc 2541135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 327 - 392
Target Start/End: Original strand, 42476826 - 42476891
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    ||||||||||  |||| |||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  42476826 tgaggggtaacattggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacggattcaagt 42476891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 43557426 - 43557491
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||  | |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  43557426 gaggggtaaccttgccgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 43557491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 46354148 - 46354213
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||||||| || |||||||||||||||||||    
T  46354148 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtc 46354213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 329 - 393
Target Start/End: Original strand, 18326989 - 18327053
Alignment:
Q  329 aggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||| ||||| | |||||||||||||||| ||||||||||  |||||||||||||||||||    
T  18326989 aggggtaaccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtc 18327053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 10693234 - 10693187
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||    
T  10693234 aactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 10693187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 11617751 - 11617704
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  11617751 aactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 11617704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 19427052 - 19427005
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||    
T  19427052 aactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtc 19427005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 35334996 - 35334930
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| ||| ||||| | |||||||||||||||| ||||||||||| ||||||||| |||||||||    
T  35334996 tgagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtc 35334930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 390
Target Start/End: Complemental strand, 5180337 - 5180276
Alignment:
Q  329 aggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||||||| ||||  | |||||||||||||||| ||||||||||||||||||| ||||||||    
T  5180337 aggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaa 5180276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 393
Target Start/End: Complemental strand, 14732999 - 14732938
Alignment:
Q  332 ggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||| ||||| | |||||||||||||||| |||||||||||||| |||| |||||||||||    
T  14732999 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtc 14732938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 22699151 - 22699086
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||  | |||||||||||||||| ||||||||||||||||| | |||||||||||    
T  22699151 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtc 22699086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 393
Target Start/End: Complemental strand, 33872070 - 33872025
Alignment:
Q  348 ctggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||    
T  33872070 ctggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtc 33872025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 393
Target Start/End: Original strand, 13805077 - 13805121
Alignment:
Q  349 tggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||    
T  13805077 tggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtc 13805121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 394
Target Start/End: Original strand, 40463853 - 40463897
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||    
T  40463853 ggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtca 40463897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 7794669 - 7794622
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||    
T  7794669 aactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtc 7794622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 19265791 - 19265834
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||| |||||||||||||||||||||||||||    
T  19265791 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtc 19265834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 27629606 - 27629653
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||    
T  27629606 aactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtc 27629653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 382
Target Start/End: Complemental strand, 29140538 - 29140487
Alignment:
Q  331 gggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcac 382  Q
    |||||||||||| | |||||||||||||||| |||||| |||||||||||||    
T  29140538 gggtaatcttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcac 29140487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 48123643 - 48123600
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||||||| ||||||||||| |||||||||||    
T  48123643 ggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtc 48123600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 393
Target Start/End: Original strand, 6736867 - 6736909
Alignment:
Q  351 gtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||||| |||||||||||||||||||||||||    
T  6736867 gtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtc 6736909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 28078313 - 28078247
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| | ||| | |||| || |||||||| ||||||||||| |||||||||||||||||||    
T  28078313 tgaggggtaaccctggcgcaactcgtgaagttgttgtcatgtgactgtaaggtcacgggttcaagtc 28078247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 29907393 - 29907438
Alignment:
Q  350 ggtaaagttgtt--atcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||    
T  29907393 ggtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtc 29907438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 356 - 393
Target Start/End: Complemental strand, 42391251 - 42391214
Alignment:
Q  356 gttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| |||||||||||||||||||||||||||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtc 42391214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 47716413 - 47716478
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| |||||   |||||| |||||||||  |||||||||| |||||||||||||||||||    
T  47716413 gaggggtaaccttggcacaactggaaaagttgttgccatgtgactggaaggtcacgggttcaagtc 47716478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 393
Target Start/End: Original strand, 11741774 - 11741814
Alignment:
Q  353 aaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 11741814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 393
Target Start/End: Original strand, 39123865 - 39123909
Alignment:
Q  349 tggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||    
T  39123865 tggtaaagttgttgtcatgtgactgaaacgacacgggttcaagtc 39123909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 14099165 - 14099122
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||    
T  14099165 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtc 14099122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 14409182 - 14409139
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||||||||||||||||||| ||||| |||||    
T  14409182 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtc 14409139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 19266426 - 19266469
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||||||||||||||||||  |||||||||||    
T  19266426 ggtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtc 19266469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 25198679 - 25198738
Alignment:
Q  331 gggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||||| ||||| |||||||||||||||||| |||| |||||||||| ||| ||| ||||    
T  25198679 gggtaaccttggcgtaactggtaaagttgttgtcatatgactgaaagatcatgggatcaa 25198738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 28362304 - 28362261
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||||||| |||||||||||| ||||||||||    
T  28362304 ggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtc 28362261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 12473257 - 12473323
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||  ||||| | ||| |||||||||||| ||||||  ||||||||||| |||||||||||    
T  12473257 tgaggggtagccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtc 12473323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 16341254 - 16341296
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    |||||||||||||||||||   |||||||||||||||||||||    
T  16341254 ggtaaagttgttatcatgtatttgaaaggtcacgggttcaagt 16341296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 34626389 - 34626323
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||| | | |||||||||||||||| |||||||| ||||||| ||| | ||||||||    
T  34626389 tgaggggtaaccttagcgcaactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtc 34626323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 390
Target Start/End: Complemental strand, 1424073 - 1424029
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||||||||||||||| | ||||||||| |||||||||| |||||    
T  1424073 aactggtaaagttgttgttatgtgactggaaggtcacggattcaa 1424029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 382
Target Start/End: Complemental strand, 3469338 - 3469306
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcac 382  Q
    |||||||||||| ||||||||||||||||||||    
T  3469338 ggtaaagttgttgtcatgtgactgaaaggtcac 3469306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 393
Target Start/End: Original strand, 7644931 - 7644975
Alignment:
Q  349 tggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||| ||||| | | |||||||||||||||||||||||||||    
T  7644931 tggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtc 7644975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 393
Target Start/End: Complemental strand, 8149126 - 8149062
Alignment:
Q  329 aggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||| |||||   ||||||||| |||||| ||||||||||| || |||||| |||||||||    
T  8149126 aggggtaaccttggcacaactggtaatgttgttgtcatgtgactgcaaagtcacgagttcaagtc 8149062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 5e-20; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 8247871 - 8247805
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  8247871 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 8247805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 10870132 - 10870067
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10870132 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 10870067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 325 - 393
Target Start/End: Complemental strand, 7697069 - 7697001
Alignment:
Q  325 cttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||||| | |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  7697069 cttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtc 7697001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 329 - 393
Target Start/End: Complemental strand, 29366902 - 29366838
Alignment:
Q  329 aggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||| ||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  29366902 aggggtaaccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtc 29366838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 13730785 - 13730720
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  13730785 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 13730720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 46421218 - 46421153
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  46421218 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtc 46421153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 52926391 - 52926326
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  52926391 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 52926326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 326 - 393
Target Start/End: Original strand, 16735415 - 16735482
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||||| | |||||||||||||||| ||||||||||| || ||||||||||||||||    
T  16735415 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtc 16735482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 1217065 - 1217131
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||  |||||| ||||||||||||||||||||||||    
T  1217065 tgaggggtaaccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtc 1217131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 40272994 - 40272928
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||| ||||||||||| ||||||| |||||||||||    
T  40272994 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtc 40272928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 4495845 - 4495780
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||| | | |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  4495845 gaggggtaaccttcgcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtc 4495780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 393
Target Start/End: Complemental strand, 5173904 - 5173836
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaa-gttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||||| | |||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  5173904 ttgaggggtaaccttggcgcaactcgtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 5173836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 13628975 - 13628908
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaa-gttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| |||||   |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  13628975 tgaggggtaaccttggcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 13628908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 26869701 - 26869748
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  26869701 aactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 26869748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 9607178 - 9607244
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||| ||||||||||| |||||||||||||||||||  ||||||||||    
T  9607178 tgaggggtaaccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtc 9607244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 39203491 - 39203557
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| |||||   |||| ||||||||||| |||||||||||||||||||| ||||||||||    
T  39203491 tgaggggtaaccttggcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 39203557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 393
Target Start/End: Original strand, 22609741 - 22609807
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||||| | ||| |||||||||||| ||||||||||| ||||| |||||||||||||    
T  22609741 ttgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtc 22609807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 26573125 - 26573168
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||| |||||||||||||||||||||||||||    
T  26573125 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtc 26573168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 53062036 - 53062079
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||||||||||||||||||||| |||||||||    
T  53062036 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtc 53062079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 393
Target Start/End: Complemental strand, 22123077 - 22123031
Alignment:
Q  347 actggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| |||||||||||||||||| ||||||||||||    
T  22123077 actggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtc 22123031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 393
Target Start/End: Complemental strand, 34420802 - 34420760
Alignment:
Q  351 gtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||| |||||||||||||||||||||||||||    
T  34420802 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtc 34420760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 392
Target Start/End: Complemental strand, 45620988 - 45620946
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    |||||||||||| ||| ||||||||||||||||||||||||||    
T  45620988 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagt 45620946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 6412002 - 6411937
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||  | |||||||||||||||| |||||| ||||| |||||| |||||||||||    
T  6412002 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtc 6411937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 12914216 - 12914151
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| | ||||||| ||||||||||  |||||||||    
T  12914216 gaggggtaaccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtc 12914151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 390
Target Start/End: Original strand, 35417914 - 35417954
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  35417914 ggtaaagttgttatcatgtgactgagaggtcacgagttcaa 35417954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 393
Target Start/End: Complemental strand, 30928302 - 30928263
Alignment:
Q  354 aagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtc 30928263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 393
Target Start/End: Original strand, 516420 - 516450
Alignment:
Q  363 tcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||||||||||||||||||    
T  516420 tcatgtgactgaaaggtcacgggttcaagtc 516450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 393
Target Start/End: Original strand, 25944468 - 25944510
Alignment:
Q  351 gtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||    
T  25944468 gtaaagttgttgtcacgtgactgaaaggtcatgggttcaagtc 25944510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 25517353 - 25517300
Alignment:
Q  329 aggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcac 382  Q
    |||| ||| ||||| | |||||||||||||||| ||||||||||| ||||||||    
T  25517353 agggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcac 25517300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 392
Target Start/End: Complemental strand, 45139624 - 45139595
Alignment:
Q  363 tcatgtgactgaaaggtcacgggttcaagt 392  Q
    ||||||||||||||||||||||||||||||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagt 45139595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 12525385 - 12525448
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | ||||||||||||||   |||| ||||||||||||||| ||||| ||||    
T  12525385 tgaggggtaaccttggcgcaactggtaaagttg---tcatatgactgaaaggtcacaggttcgagtc 12525448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 1346918 - 1346983
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  1346918 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 1346983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 393
Target Start/End: Original strand, 12063424 - 12063486
Alignment:
Q  331 gggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| ||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||    
T  12063424 gggtaaccttggtgcaactgataaagttgttatcatgagactgaaaggtcacgggttcaagtc 12063486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 1354936 - 1354871
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  1354936 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtc 1354871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 3815256 - 3815193
Alignment:
Q  330 ggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||| ||||| | |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  3815256 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtc 3815193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 12222080 - 12222033
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  12222080 aactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 12222033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 8409196 - 8409262
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||||||||||||||| | |||||||||||||||||||| ||||||||    
T  8409196 tgaggggtaaccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtc 8409262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 2166575 - 2166528
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||| ||||||||||| | |||||||||||||||||||||||||||||    
T  2166575 aactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtc 2166528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 2178208 - 2178161
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||| ||||||||||| | |||||||||||||||||||||||||||||    
T  2178208 aactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtc 2178161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 393
Target Start/End: Original strand, 9161099 - 9161142
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| |||||||||||||||||||| ||||||||||    
T  9161099 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtc 9161142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 393
Target Start/End: Complemental strand, 13905138 - 13905095
Alignment:
Q  350 ggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||| ||||||||||||||||||||||| |||||||    
T  13905138 ggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtc 13905095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 29356040 - 29355973
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaag-ttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| |||||   ||||||||||  ||||| |||||||||||||||||||||||||||||||    
T  29356040 tgaggggtaaccttggcacaactggtaaaaattgttgtcatgtgactgaaaggtcacgggttcaagtc 29355973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 394
Target Start/End: Original strand, 1941809 - 1941875
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
    ||||||||| ||||||| |||||||||||||||| |||| |||||| |||||| ||| || ||||||    
T  1941809 gaggggtaaccttggtgcaactggtaaagttgttgtcatctgactggaaggtcgcggattgaagtca 1941875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 393
Target Start/End: Original strand, 14553477 - 14553530
Alignment:
Q  339 ttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| |||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  14553477 ttggtgcaactggtaaagttgttgtcatgtgact-aaaggtcacaggttcaagtc 14553530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 14975262 - 14975196
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| ||| ||||| | ||| |||||||||||| ||||||||||| |||||||||| ||||||||    
T  14975262 tgagggataaccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtc 14975196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 392
Target Start/End: Complemental strand, 32728334 - 32728273
Alignment:
Q  331 gggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    |||||| ||||||| |||  ||||||||||| |||||||||||||||||||| | |||||||    
T  32728334 gggtaaccttggtggaacgagtaaagttgttgtcatgtgactgaaaggtcacagattcaagt 32728273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 393
Target Start/End: Complemental strand, 33923009 - 33922944
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | ||| |||||||||||| |||| ||||||||| ||||| ||||||||||    
T  33923009 gaggggtaaccttggcgcaaccggtaaagttgttgtcatttgactgaaaagtcacaggttcaagtc 33922944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 394
Target Start/End: Original strand, 8417444 - 8417492
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
    |||||||||||||||| |||||||||||||| |||||| ||||| ||||    
T  8417444 aactggtaaagttgttgtcatgtgactgaaatgtcacgagttcaggtca 8417492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 392
Target Start/End: Original strand, 20400625 - 20400685
Alignment:
Q  332 ggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    ||||| ||||| | || ||||| ||||||| |||||||||||||||||||| |||||||||    
T  20400625 ggtaaccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagt 20400685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 381
Target Start/End: Original strand, 24734605 - 24734640
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtca 381  Q
    |||||||||||||||| |||||||||||||||||||    
T  24734605 aactggtaaagttgttgtcatgtgactgaaaggtca 24734640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 390
Target Start/End: Original strand, 6024187 - 6024249
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||||||||| |||  | |||||||||||||||| |||||||| || |||||||||| |||||    
T  6024187 gaggggtaattttgacgcaactggtaaagttgttgtcatgtgattggaaggtcacggtttcaa 6024249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 390
Target Start/End: Complemental strand, 15866218 - 15866156
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    ||||||||| |||||   ||||||||||||||||  ||||||| |||||||||| ||||||||    
T  15866218 gaggggtaaccttggcccaactggtaaagttgttggcatgtgattgaaaggtcatgggttcaa 15866156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Complemental strand, 19649349 - 19649292
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgg 384  Q
    |||||| | ||||||| | ||||| |||||||||| ||||||||||||||| ||||||    
T  19649349 tgagggatgatcttggcgcaactgataaagttgttgtcatgtgactgaaagatcacgg 19649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 327 - 394
Target Start/End: Complemental strand, 24949 - 24882
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
    |||||||||| ||||| | |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  24949 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtca 24882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 392
Target Start/End: Original strand, 46806 - 46849
Alignment:
Q  349 tggtaaagttgttatcatgtgactgaaaggtcacgggttcaagt 392  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||    
T  46806 tggtaaagttgttgtcatgtgactagaaggtcacgggttcaagt 46849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 393
Target Start/End: Complemental strand, 47041 - 46999
Alignment:
Q  351 gtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||| ||| ||||||||||||||||| |||||||||    
T  47041 gtaaagttgttgtcaggtgactgaaaggtcacgagttcaagtc 46999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 327 - 393
Target Start/End: Original strand, 83828 - 83894
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||||| | |||| ||||||||||| |||||||||||||||||||||||||||||||    
T  83828 tgaggggtaaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 83894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 393
Target Start/End: Original strand, 30533 - 30598
Alignment:
Q  328 gaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||| ||||| | |||||||||||||||| |||||||||||||||||||| ||||||||||    
T  30533 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtc 30598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 44; Significance: 7e-16; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 10211 - 10164
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10211 aactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 10164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 346 - 393
Target Start/End: Complemental strand, 20539 - 20492
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  20539 aactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 20492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 8897 - 8965
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
    ||||||||||| ||||| | ||| ||| |||||||| |||||||||||||| ||||| |||||||||||    
T  8897 ttgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtca 8965  T

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Target: scaffold0187; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 394
Target Start/End: Original strand, 19225 - 19293
Alignment:
Q  326 ttgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtca 394  Q
    ||||||||||| ||||| | ||| ||| |||||||| |||||||||||||| ||||| |||||||||||    
T  19225 ttgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtca 19293  T

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Target: scaffold0005 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 327 - 393
Target Start/End: Complemental strand, 226588 - 226522
Alignment:
Q  327 tgaggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||| ||||| ||||| | |||||||||||||||| |||||||||||||||||||||| ||||||||    
T  226588 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtc 226522  T

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Target: scaffold0311 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 391
Target Start/End: Original strand, 10774 - 10827
Alignment:
Q  338 cttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaag 391  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  10774 cttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaag 10827  T

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Target: scaffold0258 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 13202 - 13139
Alignment:
Q  330 ggggtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||| ||||| | ||| |||||||||||| |||||||||||||||||||| ||||||||||    
T  13202 ggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtc 13139  T

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Target: scaffold1176 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 393
Target Start/End: Complemental strand, 1745 - 1701
Alignment:
Q  349 tggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||    
T  1745 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 1701  T

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Target: scaffold0049 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 393
Target Start/End: Original strand, 58936 - 58996
Alignment:
Q  333 gtaatcttggtgtaactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||| ||||| | |||||||||| || || |||||||||||||||||||||||||||||||    
T  58936 gtaaccttggagcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtc 58996  T

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Target: scaffold0254 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 4129 - 4176
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||| ||||||||||| | |||||||||||||||||||||||||||||    
T  4129 aactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtc 4176  T

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Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 393
Target Start/End: Original strand, 11104 - 11150
Alignment:
Q  346 aactggtaaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||    
T  11104 aactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtc 11150  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 393
Target Start/End: Complemental strand, 35189 - 35134
Alignment:
Q  339 ttggtgtaactggtaaagttg-ttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||| |||||||||||||  || ||||||||||| |||||||||||||||||||    
T  35189 ttggtgcaactggtaaagtttattgtcatgtgactgtaaggtcacgggttcaagtc 35134  T

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Target: scaffold0116 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 390
Target Start/End: Original strand, 8865 - 8907
Alignment:
Q  348 ctggtaaagttgttatcatgtgactgaaaggtcacgggttcaa 390  Q
    |||||||||||||| ||||||||||| |||||||| |||||||    
T  8865 ctggtaaagttgttgtcatgtgactgtaaggtcacaggttcaa 8907  T

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Target: scaffold0194 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 393
Target Start/End: Original strand, 24642 - 24683
Alignment:
Q  352 taaagttgttatcatgtgactgaaaggtcacgggttcaagtc 393  Q
    |||||||||| ||| ||||||| |||||||||||||||||||    
T  24642 taaagttgttgtcaagtgactgtaaggtcacgggttcaagtc 24683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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