View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17302_high_40 (Length: 268)
Name: NF17302_high_40
Description: NF17302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17302_high_40 |
 |  |
|
| [»] scaffold0008 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 236; Significance: 1e-130; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 19 - 258
Target Start/End: Complemental strand, 25096191 - 25095952
Alignment:
| Q |
19 |
acaatggtccttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactcacctccgcagctttaggagtacatcaggctacttacttttc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25096191 |
acaatggtccttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactcacctccgcagctttaggagtacatcaggctacttacttttc |
25096092 |
T |
 |
| Q |
119 |
cgtgttataaagcaaaatctgtaattaattttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgttatt |
218 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25096091 |
cgtgttataaagcaaaatccgtaattaattttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgttatt |
25095992 |
T |
 |
| Q |
219 |
tatgttgaactactgatgtaaataattgctatatcctttg |
258 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25095991 |
tatgttgaactactgatgtaaataattgctatatcctttg |
25095952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 19 - 258
Target Start/End: Complemental strand, 25154161 - 25153922
Alignment:
| Q |
19 |
acaatggtccttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactcacctccgcagctttaggagtacatcaggctacttacttttc |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25154161 |
acaatggtccttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactcacctccgcagctttaggagtacatcaggctacttacttttc |
25154062 |
T |
 |
| Q |
119 |
cgtgttataaagcaaaatctgtaattaattttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgttatt |
218 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25154061 |
cgtgttataaagcaaaatccgtaattaattttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgttatt |
25153962 |
T |
 |
| Q |
219 |
tatgttgaactactgatgtaaataattgctatatcctttg |
258 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25153961 |
tatgttgaactactgatgtaaataattgctatatcctttg |
25153922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 29 - 242
Target Start/End: Complemental strand, 25098955 - 25098745
Alignment:
| Q |
29 |
ttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactcacctccgcagctttaggagtacatcaggctacttacttttccgtgttataa |
128 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||||||||||||| || | ||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
25098955 |
ttattttgaaggaaaggaatgatagacttttccaaaccaaagaaaactcatcttcacagcttttggagtacatcaggctacttacttttccgtgttataa |
25098856 |
T |
 |
| Q |
129 |
agcaaaatctgtaattaattttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgttatttatgttgaac |
228 |
Q |
| |
|
||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
25098855 |
agcaaaatctgtaat---tttttattataagttttatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgttatttctgttgaac |
25098759 |
T |
 |
| Q |
229 |
tactgatgtaaata |
242 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
25098758 |
tactaatgtaaata |
25098745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 29 - 242
Target Start/End: Complemental strand, 25158045 - 25157835
Alignment:
| Q |
29 |
ttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactcacctccgcagctttaggagtacatcaggctacttacttttccgtgttataa |
128 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||||||||||||| || | ||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
25158045 |
ttattttgaaggaaaggaatgatagacttttccaaaccaaagaaaactcatcttcacagcttttggagtacatcaggctacttacttttccgtgttataa |
25157946 |
T |
 |
| Q |
129 |
agcaaaatctgtaattaattttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgttatttatgttgaac |
228 |
Q |
| |
|
||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
25157945 |
agcaaaatctgtaat---tttttattataagttttatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgttatttctgttgaac |
25157849 |
T |
 |
| Q |
229 |
tactgatgtaaata |
242 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
25157848 |
tactaatgtaaata |
25157835 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 208
Target Start/End: Original strand, 31250794 - 31250970
Alignment:
| Q |
29 |
ttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactcacctccgcagctttaggagtacatcaggctacttacttttccgtgttataa |
128 |
Q |
| |
|
|||| |||||||||||||| || |||||||||||||||||||||||||| | ||||||| |||| |||| ||||| ||| ||||| |||| |||| |
|
|
| T |
31250794 |
ttatatggaaggaaaggaacgaaagacttttccgaaccaaagaaaactcctttgttcagcttttggagaacattaggcttctttctttttcgtggcataa |
31250893 |
T |
 |
| Q |
129 |
agcaaaatctgtaattaattttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaat |
208 |
Q |
| |
|
|||||||| |||| | || ||| ||||| ||||||||||||||| ||||| ||||||||||||||||| ||||||| |
|
|
| T |
31250894 |
agcaaaatttgta---acttcctattttaagtatcatgattggtgccataaccctttcttatgtttgggtatgggctaat |
31250970 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 147 - 176
Target Start/End: Original strand, 32200143 - 32200172
Alignment:
| Q |
147 |
ttttcattataagtttcatgattggtgcca |
176 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
32200143 |
ttttcattataagtttcatgattggtgcca |
32200172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 29 - 219
Target Start/End: Complemental strand, 26857917 - 26857730
Alignment:
| Q |
29 |
ttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactcacctccgcagctttaggagtacatcaggctacttacttttccgtgttataa |
128 |
Q |
| |
|
||||||||||||||||||| |||| |||||| ||||||||||||||||||||| |||| |||| |||||||||||| |||||| ||| |||||| |||| |
|
|
| T |
26857917 |
ttatttggaaggaaaggaacgataaactttttcgaaccaaagaaaactcaccttcgcaacttttggagtacatcagtctactttcttatccgtggcataa |
26857818 |
T |
 |
| Q |
129 |
agcaaaatctgtaattaattttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgttattt |
219 |
Q |
| |
|
|||||||| |||||| |||||||||||||||| ||||||||||| ||||||| || ||| |||||||||| |||||||||||||||||| |
|
|
| T |
26857817 |
agcaaaatttgtaat---ttttcattataagttttatgattggtgctagaacccgtttttaagtttgggtatgggctaatcattgttattt |
26857730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 210
Target Start/End: Complemental strand, 3330590 - 3330527
Alignment:
| Q |
147 |
ttttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatca |
210 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||| | || || ||||||||||||||||||||| |
|
|
| T |
3330590 |
ttttaattataagtttcatgattggtgccaaaactcgtttttgtgtttgggtataggctaatca |
3330527 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 29 - 215
Target Start/End: Original strand, 18001937 - 18002120
Alignment:
| Q |
29 |
ttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactcacctccgcagctttaggagtacatcaggctacttacttttccgtgttataa |
128 |
Q |
| |
|
||||||||||||||| ||| |||||||||||| |||||||||||| |||| || ||| ||| |||| || ||||||| ||| ||||| | || |||| |
|
|
| T |
18001937 |
ttatttggaaggaaatgaacgatagacttttctgaaccaaagaaagctcatgtcgtcagattttggagaacctcaggctcctttctttttcttggcataa |
18002036 |
T |
 |
| Q |
129 |
agcaaaatctgtaattaattttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgtt |
215 |
Q |
| |
|
|||||||| || ||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
18002037 |
agcaaaatttgc---taatttttattataagtttcatgattggtgccagaacctgttcttatatttgggtataggctaatcattgtt |
18002120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 207
Target Start/End: Original strand, 10383237 - 10383411
Alignment:
| Q |
29 |
ttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactcacctccgcagctttaggagtacatcaggctacttacttttccgtgttataa |
128 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||| ||||||||||| ||||| | |||| |||| |||||| ||| ||| ||| | |||| ||||| |
|
|
| T |
10383237 |
ttatttgaaaggaaaggaatgctagacttttccgagccaaagaaaacacaccttctt-gcttctggagaacatcatgcttctttcttattcgtggtataa |
10383335 |
T |
 |
| Q |
129 |
agcaaaatctgtaattaattttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaa |
207 |
Q |
| |
|
||| |||| ||||||| || |||||||||||||||||||||||||| |||| |||| ||||||||| ||||||||| |
|
|
| T |
10383336 |
agctaaatttgtaatttat---cattataagtttcatgattggtgccaaaacctgttctcatgtttgggaataggctaa |
10383411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 29 - 215
Target Start/End: Original strand, 7635687 - 7635870
Alignment:
| Q |
29 |
ttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactcacctccgcagctttaggagtacatcaggctacttacttttccgtgttataa |
128 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||| |||| ||| | | |||| ||| ||||||| |||| |||| |||||||| ||||| || |||| |
|
|
| T |
7635687 |
ttatttggaaggaaaggaatgacagactcttcagaacaaaacagagctcatttcctcagcttttggagaacattaggctactctctttttattggcataa |
7635786 |
T |
 |
| Q |
129 |
agcaaaatctgtaattaattttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgtt |
215 |
Q |
| |
|
|||||||| || || |||| |||||||||||||||||||||| |||||| | ||||| |||||||||||||||||||||||||| |
|
|
| T |
7635787 |
agcaaaatgtgc---tagttttaattataagtttcatgattggtgtcagaactcgttcttgtgtttgggtataggctaatcattgtt |
7635870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 50371716 - 50371648
Alignment:
| Q |
147 |
ttttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgtt |
215 |
Q |
| |
|
|||| ||||||||||||||||||||||||| || || ||||| |||||||||||||||||||||||||| |
|
|
| T |
50371716 |
ttttaattataagtttcatgattggtgccataatccgttcttgtgtttgggtataggctaatcattgtt |
50371648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 205
Target Start/End: Complemental strand, 5883252 - 5883078
Alignment:
| Q |
29 |
ttatttggaaggaaaggaatgatagacttttccgaaccaaag-aaaactcacctccgcagctttaggagtacatcaggctacttacttttccgtgttata |
127 |
Q |
| |
|
||||||||||||||| || ||||||| ||||| || |||| ||||||| ||| ||||||| |||| |||| |||||||| ||||| || ||| |
|
|
| T |
5883252 |
ttatttggaaggaaatgattgatagaattttcaaaaacaaaacaaaactcctttccccagcttttggagaacattaggctactctctttttattggcata |
5883153 |
T |
 |
| Q |
128 |
aagcaaaatctgtaattaattttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggct |
205 |
Q |
| |
|
||||||||| || || |||| |||||||||| |||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
5883152 |
aagcaaaatttgc---tagttttaattataagttacatgattggtgccagaacccgttcttgtgtttgggtataggct |
5883078 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Original strand, 19719208 - 19719276
Alignment:
| Q |
147 |
ttttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgtt |
215 |
Q |
| |
|
|||| ||||||||||| |||||||||||| ||||| ||||| ||||||||||||| |||||||||||| |
|
|
| T |
19719208 |
ttttaattataagttttatgattggtgcccgaacctgttcttgtgtttgggtatagactaatcattgtt |
19719276 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 52; Significance: 7e-21; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 214
Target Start/End: Complemental strand, 30376059 - 30375877
Alignment:
| Q |
29 |
ttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactcacctccgcagctttaggagtacatcaggctacttacttttccgtgttataa |
128 |
Q |
| |
|
||||||||||||||| |||||||||| |||| | ||||||| ||| ||| | | || |||| |||| |||| |||||||| ||||| | || |||| |
|
|
| T |
30376059 |
ttatttggaaggaaatgaatgatagaatttttcaaaccaaacaaagctccttttctcaacttttggagaacattaggctactctctttttcatggcataa |
30375960 |
T |
 |
| Q |
129 |
agcaaaatctgtaattaattttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgt |
214 |
Q |
| |
|
|||||||| || || |||| ||||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||| |
|
|
| T |
30375959 |
agcaaaatttgc---tagttttaattataagttttttgattggtgccagaacccgttcttgtgtttggatataggctaatcattgt |
30375877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 30406185 - 30406136
Alignment:
| Q |
147 |
ttttcattataagtttcatgattggtgccagaaccccttcttatgtttgg |
196 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || | |||||||| |
|
|
| T |
30406185 |
ttttcattataagtttcatgattggtgccagaaccctttttcatgtttgg |
30406136 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 44121450 - 44121369
Alignment:
| Q |
147 |
ttttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgtt-atttatgttgaa |
227 |
Q |
| |
|
|||| ||| |||||||||||||| |||| |||||| ||||||||||| ||||||| |||||||||||| |||| ||||||| |
|
|
| T |
44121450 |
ttttaattttaagtttcatgattagtgctagaacctgttcttatgtttaggtatagtctaatcattgttcatttttgttgaa |
44121369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 25131850 - 25131802
Alignment:
| Q |
29 |
ttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactc |
77 |
Q |
| |
|
||||||||||||||||||| || ||||||||| |||||||||||||||| |
|
|
| T |
25131850 |
ttatttggaaggaaaggaacgacagacttttctgaaccaaagaaaactc |
25131802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 4555754 - 4555795
Alignment:
| Q |
150 |
tcattataagtttcatgattggtgccagaaccccttcttatg |
191 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||| |||||||| |
|
|
| T |
4555754 |
tcattatatgtttcatgattggtgccataaccctttcttatg |
4555795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 213
Target Start/End: Complemental strand, 33879883 - 33879817
Alignment:
| Q |
147 |
ttttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattg |
213 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||| || ||||| ||||| |||||||||||||||||| |
|
|
| T |
33879883 |
ttttaattataagtttcatgattggtggcagaatccgttcttgtgtttaggtataggctaatcattg |
33879817 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 8914746 - 8914678
Alignment:
| Q |
147 |
ttttcattataagtttcatgattggtgccagaaccccttcttatgtttgggtataggctaatcattgtt |
215 |
Q |
| |
|
|||| ||||||||||| |||||||||| |||||| | ||||| |||||||||||||| ||||||||||| |
|
|
| T |
8914746 |
ttttaattataagttttatgattggtgtcagaactcgttcttgtgtttgggtataggttaatcattgtt |
8914678 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 200
Target Start/End: Complemental strand, 9083676 - 9083628
Alignment:
| Q |
152 |
attataagtttcatgattggtgccagaaccccttcttatgtttgggtat |
200 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||| | ||||||||||| |
|
|
| T |
9083676 |
attataattttcatgattggtgccataaccccttttgttgtttgggtat |
9083628 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 42171 - 42212
Alignment:
| Q |
156 |
taagtttcatgattggtgccagaaccccttcttatgtttggg |
197 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
42171 |
taagtttcatgattggtgtcagaaccctttcttatgtttggg |
42212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 77
Target Start/End: Original strand, 42047 - 42095
Alignment:
| Q |
29 |
ttatttggaaggaaaggaatgatagacttttccgaaccaaagaaaactc |
77 |
Q |
| |
|
|||||||||| |||| ||| ||||||||||||||| |||||||||||| |
|
|
| T |
42047 |
ttatttggaaagaaaagaacaatagacttttccgaagcaaagaaaactc |
42095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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