View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17302_high_45 (Length: 253)
Name: NF17302_high_45
Description: NF17302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17302_high_45 |
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Alignment Details
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 31085431 - 31085673
Alignment:
| Q |
1 |
tagcaatcaattattattttcaacgataaaattttacgatttttgataggatagaaccatgcatttatcttttaactgatgtgtacatgtgtgtgtacaa |
100 |
Q |
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| T |
31085431 |
tagcaatcaattattattttcaacgataaaattttacgatttttgataggatagaaccatgcatctatcttttaactgatgtgtacatgtgtgtgtacaa |
31085530 |
T |
|
| Q |
101 |
atataccatgcatgttccttgataagcctatagtgctgggtgtaggaggtatttggattctctacggtgttgtcgatgacccatgacaagaatatggggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31085531 |
atataccatgcatgttccttgataagcctatagtgctgggtgtaggaggtatttggattctctacggtgttgtcgatgacccatgacaagaatatggggg |
31085630 |
T |
|
| Q |
201 |
aaggccaaaaatccgcagcacaaacagaccactgcggcctatg |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31085631 |
aaggccaaaaatccgcagcacaaacagaccactgcggcctatg |
31085673 |
T |
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