View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17302_high_51 (Length: 238)

Name: NF17302_high_51
Description: NF17302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17302_high_51
NF17302_high_51
[»] chr4 (36 HSPs)
chr4 (67-221)||(16295728-16295882)
chr4 (74-221)||(37017733-37017880)
chr4 (74-221)||(27995224-27995371)
chr4 (76-221)||(13042452-13042597)
chr4 (67-221)||(19436428-19436582)
chr4 (74-216)||(25089781-25089923)
chr4 (79-216)||(14547740-14547877)
chr4 (79-216)||(16996656-16996793)
chr4 (74-220)||(19735957-19736101)
chr4 (75-211)||(4859523-4859660)
chr4 (74-216)||(9871955-9872097)
chr4 (74-216)||(40228732-40228866)
chr4 (79-221)||(8710044-8710186)
chr4 (78-221)||(26012609-26012753)
chr4 (74-221)||(3484122-3484268)
chr4 (74-163)||(14971491-14971580)
chr4 (74-163)||(50159522-50159611)
chr4 (81-221)||(15012151-15012289)
chr4 (78-221)||(9637045-9637186)
chr4 (74-191)||(15343500-15343618)
chr4 (74-221)||(38106457-38106604)
chr4 (81-161)||(14943176-14943256)
chr4 (74-221)||(4616572-4616716)
chr4 (90-161)||(10704078-10704149)
chr4 (90-161)||(10917848-10917919)
chr4 (74-141)||(33245659-33245726)
chr4 (82-140)||(40906059-40906117)
chr4 (67-131)||(26045947-26046010)
chr4 (67-131)||(26051128-26051191)
chr4 (74-151)||(14650081-14650160)
chr4 (74-151)||(14700900-14700979)
chr4 (74-131)||(8582067-8582125)
chr4 (81-163)||(15042737-15042819)
chr4 (81-163)||(15111605-15111687)
chr4 (74-131)||(20159079-20159135)
chr4 (185-218)||(33245721-33245754)
[»] scaffold0001 (1 HSPs)
scaffold0001 (74-221)||(443059-443206)
[»] scaffold0420 (1 HSPs)
scaffold0420 (74-221)||(14972-15119)
[»] scaffold0630 (2 HSPs)
scaffold0630 (74-221)||(869-1016)
scaffold0630 (74-221)||(7035-7182)
[»] chr1 (18 HSPs)
chr1 (74-221)||(7053792-7053939)
chr1 (74-216)||(48300057-48300199)
chr1 (74-210)||(20635403-20635540)
chr1 (74-212)||(4597764-4597902)
chr1 (74-216)||(38888838-38888980)
chr1 (74-214)||(16060080-16060220)
chr1 (74-209)||(42911090-42911226)
chr1 (74-221)||(38058324-38058470)
chr1 (63-216)||(8277783-8277926)
chr1 (74-153)||(41230119-41230198)
chr1 (74-221)||(51082201-51082347)
chr1 (74-219)||(14239313-14239457)
chr1 (67-191)||(45917773-45917898)
chr1 (79-221)||(20043278-20043419)
chr1 (80-218)||(31207387-31207521)
chr1 (74-161)||(44823592-44823682)
chr1 (83-122)||(52982716-52982755)
chr1 (74-131)||(21043973-21044028)
[»] scaffold0107 (1 HSPs)
scaffold0107 (74-216)||(35607-35749)
[»] chr8 (20 HSPs)
chr8 (74-221)||(18303557-18303705)
chr8 (74-221)||(22206432-22206579)
chr8 (74-216)||(5084181-5084323)
chr8 (74-221)||(23668598-23668746)
chr8 (74-216)||(45118731-45118874)
chr8 (84-216)||(18832364-18832496)
chr8 (74-209)||(39937761-39937896)
chr8 (74-191)||(13665911-13666028)
chr8 (74-191)||(13725186-13725303)
chr8 (67-221)||(22260979-22261134)
chr8 (74-221)||(22238933-22239080)
chr8 (81-221)||(42819805-42819945)
chr8 (80-221)||(19930294-19930434)
chr8 (69-163)||(29764432-29764526)
chr8 (74-218)||(22921351-22921495)
chr8 (138-216)||(23944749-23944827)
chr8 (63-142)||(20502776-20502856)
chr8 (74-126)||(32120862-32120914)
chr8 (90-142)||(22253867-22253919)
chr8 (74-126)||(29332901-29332953)
[»] chr7 (31 HSPs)
chr7 (74-221)||(41055195-41055343)
chr7 (74-212)||(15172052-15172190)
chr7 (74-216)||(19280937-19281079)
chr7 (74-216)||(15719075-15719218)
chr7 (75-221)||(16437689-16437836)
chr7 (74-218)||(20618437-20618581)
chr7 (74-216)||(20584441-20584584)
chr7 (75-221)||(47976822-47976969)
chr7 (61-221)||(12757805-12757963)
chr7 (74-221)||(14162631-14162778)
chr7 (81-221)||(12467125-12467267)
chr7 (74-221)||(43278417-43278563)
chr7 (74-217)||(44191465-44191607)
chr7 (74-163)||(3286314-3286403)
chr7 (74-163)||(32161884-32161973)
chr7 (81-221)||(14257034-14257172)
chr7 (81-221)||(32299965-32300103)
chr7 (79-191)||(39432285-39432398)
chr7 (74-153)||(18876631-18876710)
chr7 (83-221)||(8757876-8758011)
chr7 (83-221)||(23555992-23556127)
chr7 (74-163)||(4324343-4324431)
chr7 (95-221)||(23557171-23557294)
chr7 (74-163)||(22123224-22123310)
chr7 (74-163)||(40556425-40556511)
chr7 (81-131)||(42461362-42461412)
chr7 (74-126)||(18422886-18422938)
chr7 (79-126)||(24274157-24274204)
chr7 (74-131)||(16995619-16995677)
chr7 (63-126)||(37794310-37794375)
chr7 (80-131)||(16581822-16581874)
[»] chr6 (36 HSPs)
chr6 (74-214)||(23655206-23655346)
chr6 (74-216)||(27127204-27127346)
chr6 (80-221)||(23083732-23083872)
chr6 (74-216)||(31732654-31732796)
chr6 (88-216)||(1642104-1642233)
chr6 (75-218)||(15892751-15892895)
chr6 (75-221)||(19830701-19830837)
chr6 (80-221)||(20077605-20077746)
chr6 (74-215)||(23086786-23086909)
chr6 (67-183)||(30677355-30677471)
chr6 (83-221)||(18655548-18655685)
chr6 (74-183)||(19657423-19657532)
chr6 (81-221)||(15706593-15706731)
chr6 (81-221)||(19774876-19775014)
chr6 (67-161)||(610275-610368)
chr6 (81-191)||(22804564-22804674)
chr6 (83-221)||(12388928-12389065)
chr6 (74-139)||(22377327-22377392)
chr6 (74-142)||(20078814-20078882)
chr6 (74-152)||(16244702-16244780)
chr6 (80-175)||(18260624-18260720)
chr6 (83-151)||(17230341-17230411)
chr6 (74-126)||(34962500-34962552)
chr6 (92-143)||(15895323-15895374)
chr6 (74-142)||(18452608-18452675)
chr6 (85-156)||(20136032-20136104)
chr6 (84-144)||(20184610-20184670)
chr6 (84-144)||(22151321-22151381)
chr6 (85-156)||(22196765-22196837)
chr6 (74-126)||(23991637-23991689)
chr6 (81-200)||(22213020-22213137)
chr6 (123-218)||(25806386-25806484)
chr6 (63-144)||(20181579-20181659)
chr6 (63-144)||(22154332-22154412)
chr6 (94-142)||(16492544-16492592)
chr6 (63-163)||(17740804-17740903)
[»] scaffold1815 (1 HSPs)
scaffold1815 (74-221)||(148-295)
[»] chr3 (32 HSPs)
chr3 (74-221)||(45533349-45533496)
chr3 (74-216)||(4853022-4853164)
chr3 (74-216)||(4874756-4874898)
chr3 (74-221)||(42355445-42355593)
chr3 (74-212)||(44268638-44268777)
chr3 (67-212)||(10561844-10561989)
chr3 (74-212)||(19885518-19885657)
chr3 (74-216)||(2843183-2843325)
chr3 (74-188)||(14154356-14154470)
chr3 (74-214)||(41174270-41174410)
chr3 (74-216)||(17325695-17325834)
chr3 (74-163)||(18368246-18368335)
chr3 (104-216)||(14872014-14872126)
chr3 (74-221)||(50349737-50349885)
chr3 (74-221)||(6157638-6157784)
chr3 (74-221)||(6807135-6807279)
chr3 (81-221)||(43890974-43891112)
chr3 (74-163)||(37037098-37037187)
chr3 (67-218)||(52213920-52214069)
chr3 (74-163)||(46751463-46751552)
chr3 (74-161)||(43924587-43924673)
chr3 (81-163)||(18701740-18701822)
chr3 (91-218)||(3395542-3395667)
chr3 (83-164)||(15555083-15555164)
chr3 (67-139)||(11910043-11910115)
chr3 (160-216)||(5213969-5214025)
chr3 (83-221)||(14817529-14817664)
chr3 (74-163)||(13523997-13524088)
chr3 (74-138)||(37427127-37427191)
chr3 (74-120)||(14643329-14643375)
chr3 (74-126)||(6818466-6818519)
chr3 (114-183)||(17260955-17261024)
[»] scaffold0170 (1 HSPs)
scaffold0170 (82-221)||(1772-1911)
[»] chr2 (15 HSPs)
chr2 (74-216)||(24514384-24514526)
chr2 (74-212)||(28654324-28654462)
chr2 (74-216)||(23759750-23759893)
chr2 (74-216)||(36838322-36838465)
chr2 (86-216)||(17305625-17305755)
chr2 (83-221)||(31517734-31517872)
chr2 (67-216)||(22253362-22253501)
chr2 (74-191)||(24835467-24835583)
chr2 (81-221)||(357199-357337)
chr2 (74-148)||(24816126-24816200)
chr2 (81-163)||(22689089-22689171)
chr2 (81-142)||(34136336-34136397)
chr2 (74-117)||(24672651-24672694)
chr2 (74-131)||(15475965-15476021)
chr2 (74-126)||(32216011-32216063)
[»] scaffold0003 (2 HSPs)
scaffold0003 (75-221)||(27319-27466)
scaffold0003 (74-218)||(147761-147903)
[»] scaffold0020 (1 HSPs)
scaffold0020 (79-216)||(141673-141811)
[»] scaffold0301 (3 HSPs)
scaffold0301 (74-214)||(9720-9861)
scaffold0301 (74-202)||(10047-10175)
scaffold0301 (102-146)||(9999-10043)
[»] scaffold0111 (4 HSPs)
scaffold0111 (74-218)||(6405-6549)
scaffold0111 (80-218)||(4473-4611)
scaffold0111 (74-210)||(13532-13668)
scaffold0111 (74-163)||(20676-20765)
[»] scaffold0092 (1 HSPs)
scaffold0092 (104-221)||(19484-19601)
[»] scaffold0134 (1 HSPs)
scaffold0134 (74-216)||(11089-11229)
[»] scaffold0026 (2 HSPs)
scaffold0026 (74-221)||(22993-23141)
scaffold0026 (67-221)||(19987-20142)
[»] scaffold0039 (1 HSPs)
scaffold0039 (75-216)||(11645-11786)
[»] scaffold0098 (1 HSPs)
scaffold0098 (67-210)||(38369-38512)
[»] scaffold0371 (1 HSPs)
scaffold0371 (74-216)||(12113-12252)
[»] scaffold1098 (1 HSPs)
scaffold1098 (67-221)||(281-436)
[»] scaffold0108 (1 HSPs)
scaffold0108 (74-221)||(4571-4719)
[»] scaffold0040 (3 HSPs)
scaffold0040 (98-216)||(105065-105184)
scaffold0040 (81-162)||(21598-21679)
scaffold0040 (81-162)||(10479-10560)
[»] chr5 (13 HSPs)
chr5 (79-221)||(36510487-36510629)
chr5 (67-218)||(23203512-23203665)
chr5 (74-163)||(21407307-21407396)
chr5 (67-218)||(26781636-26781786)
chr5 (74-221)||(12123291-12123436)
chr5 (61-163)||(21558690-21558792)
chr5 (74-163)||(21556041-21556130)
chr5 (81-221)||(33896844-33896982)
chr5 (137-216)||(11898814-11898893)
chr5 (74-131)||(20912795-20912853)
chr5 (74-131)||(22109102-22109160)
chr5 (94-142)||(21732605-21732653)
chr5 (94-142)||(21810256-21810304)
[»] scaffold0016 (2 HSPs)
scaffold0016 (67-191)||(175378-175503)
scaffold0016 (81-191)||(183507-183617)
[»] scaffold0546 (1 HSPs)
scaffold0546 (82-221)||(8922-9060)
[»] scaffold0109 (1 HSPs)
scaffold0109 (82-221)||(4247-4385)
[»] scaffold0004 (2 HSPs)
scaffold0004 (74-183)||(199051-199160)
scaffold0004 (83-163)||(209011-209089)
[»] scaffold0096 (1 HSPs)
scaffold0096 (81-221)||(12659-12797)
[»] scaffold0018 (1 HSPs)
scaffold0018 (74-148)||(8100-8174)
[»] scaffold0331 (1 HSPs)
scaffold0331 (74-163)||(13765-13854)
[»] scaffold0198 (1 HSPs)
scaffold0198 (1-68)||(1978-2045)
[»] scaffold0220 (2 HSPs)
scaffold0220 (74-148)||(14992-15066)
scaffold0220 (67-139)||(2737-2809)
[»] scaffold1849 (1 HSPs)
scaffold1849 (79-163)||(1132-1216)
[»] scaffold0285 (1 HSPs)
scaffold0285 (81-221)||(22094-22232)
[»] scaffold0180 (1 HSPs)
scaffold0180 (83-190)||(29835-29942)
[»] scaffold0486 (1 HSPs)
scaffold0486 (79-221)||(7572-7712)
[»] scaffold0429 (1 HSPs)
scaffold0429 (83-221)||(3199-3336)
[»] scaffold0203 (1 HSPs)
scaffold0203 (81-163)||(19715-19797)
[»] scaffold0077 (2 HSPs)
scaffold0077 (67-221)||(28758-28908)
scaffold0077 (67-134)||(13242-13309)
[»] scaffold0333 (1 HSPs)
scaffold0333 (81-221)||(19494-19632)
[»] scaffold0074 (1 HSPs)
scaffold0074 (67-142)||(7570-7645)
[»] scaffold0070 (1 HSPs)
scaffold0070 (83-221)||(7595-7732)
[»] scaffold0076 (2 HSPs)
scaffold0076 (74-218)||(49998-50141)
scaffold0076 (67-163)||(27234-27329)
[»] scaffold1716 (1 HSPs)
scaffold1716 (81-221)||(210-348)
[»] scaffold0500 (1 HSPs)
scaffold0500 (74-151)||(6917-6996)
[»] scaffold0218 (1 HSPs)
scaffold0218 (74-163)||(9896-9982)
[»] scaffold0273 (2 HSPs)
scaffold0273 (83-169)||(6121-6205)
scaffold0273 (115-221)||(9270-9374)
[»] scaffold0032 (1 HSPs)
scaffold0032 (81-163)||(66102-66184)
[»] scaffold0716 (2 HSPs)
scaffold0716 (74-148)||(448-522)
scaffold0716 (74-111)||(3841-3878)
[»] scaffold0073 (1 HSPs)
scaffold0073 (79-151)||(56278-56352)
[»] scaffold0338 (1 HSPs)
scaffold0338 (74-163)||(15581-15669)
[»] scaffold0453 (1 HSPs)
scaffold0453 (91-163)||(2453-2523)
[»] scaffold0009 (1 HSPs)
scaffold0009 (74-142)||(193083-193150)
[»] scaffold0364 (1 HSPs)
scaffold0364 (83-218)||(6534-6666)
[»] scaffold0065 (1 HSPs)
scaffold0065 (81-132)||(54202-54253)
[»] scaffold1274 (1 HSPs)
scaffold1274 (74-141)||(1098-1166)
[»] scaffold0282 (2 HSPs)
scaffold0282 (74-142)||(18843-18910)
scaffold0282 (83-142)||(12356-12415)
[»] scaffold0019 (1 HSPs)
scaffold0019 (67-122)||(26618-26673)
[»] scaffold0005 (1 HSPs)
scaffold0005 (74-151)||(167132-167211)
[»] scaffold0359 (1 HSPs)
scaffold0359 (80-141)||(14833-14895)
[»] scaffold0064 (1 HSPs)
scaffold0064 (74-131)||(62855-62913)
[»] scaffold0035 (1 HSPs)
scaffold0035 (81-135)||(59737-59791)
[»] scaffold0253 (1 HSPs)
scaffold0253 (67-131)||(14044-14109)
[»] scaffold0023 (1 HSPs)
scaffold0023 (74-126)||(18676-18728)
[»] scaffold0010 (1 HSPs)
scaffold0010 (88-131)||(6415-6458)
[»] scaffold0002 (1 HSPs)
scaffold0002 (88-131)||(399666-399709)
[»] scaffold0962 (1 HSPs)
scaffold0962 (125-215)||(2071-2164)
[»] scaffold0011 (1 HSPs)
scaffold0011 (67-132)||(38879-38945)
[»] scaffold0396 (1 HSPs)
scaffold0396 (74-131)||(718-773)
[»] scaffold0207 (1 HSPs)
scaffold0207 (74-163)||(12254-12342)
[»] scaffold0126 (1 HSPs)
scaffold0126 (79-156)||(5172-5249)
[»] scaffold0106 (1 HSPs)
scaffold0106 (81-125)||(20310-20354)


Alignment Details
Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 67 - 221
Target Start/End: Complemental strand, 16295882 - 16295728
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacat 166  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16295882 gtaacaggatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgagattttacat 16295783  T
Q  167 tgagacctttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    |||  ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16295782 tgaagcctttgtgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 16295728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 37017880 - 37017733
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  37017880 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgagattttacattgaggcc 37017781  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  37017780 tttgtgccaaggttgttttaaacgttgaaataatttccgctgcgaagt 37017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 27995371 - 27995224
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  27995371 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgagattttacattgaggcc 27995272  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  27995271 tttgtgccaaagttgttttaaacgttgaaataatttccgctgcgaagt 27995224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 76 - 221
Target Start/End: Original strand, 13042452 - 13042597
Alignment:
Q  76 tgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctt 175  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13042452 tgagaattttgttgttgctttctgttccttacgtattattctatgaagttttatgaacatgttgttggaataattttatgagattttacattgagacctt 13042551  T
Q  176 tatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    | |||||||||||||||||| |||||||| ||||||||||| ||||    
T  13042552 tgtgccaaggttgttttaaatgttgaaataatttccgctgcaaagt 13042597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 67 - 221
Target Start/End: Original strand, 19436428 - 19436582
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacat 166  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  19436428 gtaacaggatgagaattatgttattgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgagattttacgt 19436527  T
Q  167 tgagacctttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    |||| ||||| ||||||||||||||||||||||||||| ||||||||||| ||||    
T  19436528 tgaggcctttgtgccaaggttgttttaaacgttgaaataatttccgctgcaaagt 19436582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 25089923 - 25089781
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||    
T  25089923 gatgagaattttgttgttgctttctattccttacgtattattttatgaagttttatgaacatattgttggaataattttatgaaattttaccttgaggcc 25089824  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
     || ||||||||||||||||||||||||||| |||||||||||    
T  25089823 attgtgccaaggttgttttaaacgttgaaataatttccgctgc 25089781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 14547877 - 14547740
Alignment:
Q  79 gaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttat 178  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| |    
T  14547877 gaattttgttgtttctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgagattttaccttgaggcctttgt 14547778  T
Q  179 gccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    | |||||||||||||||||||||||| |||||||||||    
T  14547777 gtcaaggttgttttaaacgttgaaataatttccgctgc 14547740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 16996793 - 16996656
Alignment:
Q  79 gaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttat 178  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| ||||| |    
T  16996793 gaatttggttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttattgaaataattttatgagattttacattgaggcctttgt 16996694  T
Q  179 gccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    |||||||||||||||||||||||||| |||||||||||    
T  16996693 gccaaggttgttttaaacgttgaaataatttccgctgc 16996656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 74 - 220
Target Start/End: Complemental strand, 19736101 - 19735957
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| |||||| ||    
T  19736101 gatgggaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttagaacaattttatgagattttatattgaggcc 19736002  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaag 220  Q
    ||| ||||||||||||||||||||||||||  |||||||||||||||    
T  19736001 tttgtgccaaggttgttttaaacgttgaaa--atttccgctgcgaag 19735957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 75 - 211
Target Start/End: Original strand, 4859523 - 4859660
Alignment:
Q  75 atgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacct 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||    
T  4859523 atgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttataagattttacattgaggcct 4859622  T
Q  175 ttatgccaaggttgtttt-aaacgttgaaatgatttcc 211  Q
    || ||||||||||||||| ||| |||||||| ||||||    
T  4859623 ttgtgccaaggttgttttaaaatgttgaaataatttcc 4859660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 9871955 - 9872097
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||    
T  9871955 gatgagaattttattgttgctttatgttccttacgtattattttgtgaagttttatgaatatgttgttggaataattttatgagattttaccttgaggcc 9872054  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||| || |||||||||||||||||||||||| |||||||||||    
T  9872055 tttgtgtcaaggttgttttaaacgttgaaataatttccgctgc 9872097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 40228866 - 40228732
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||       |||||||||||||||||| |||||||||||||| |    
T  40228866 gatgagaattttgttgttgctttctgttccttacgtattattttttgaagttttatga-------gttggaataattttatgagattttacattgagatc 40228774  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    |||||||||||||||||||||| |||||||| |||||||||||    
T  40228773 tttatgccaaggttgttttaaa-gttgaaataatttccgctgc 40228732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 79 - 221
Target Start/End: Complemental strand, 8710186 - 8710044
Alignment:
Q  79 gaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttat 178  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||  |    
T  8710186 gaatttcgttgttgctttctgttccttacgtattactttatgaagttttatgaacatgttgttggaataattttatgagattttacgttgaggccttggt 8710087  T
Q  179 gccaaggttgttttaaacgtt-gaaatgatttccgctgcgaagt 221  Q
    | ||||||| |||||||||||  |||| ||||||||||||||||    
T  8710086 g-caaggttattttaaacgttaaaaataatttccgctgcgaagt 8710044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 26012753 - 26012609
Alignment:
Q  78 agaattttgttgttgctttctgttccttacgtattatttt-atgaagttttatgaacatgttgttggaataattttatgatattttacattgagaccttt 176  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||| || |||||| |||||| ||||     
T  26012753 agaattttgttgttgttttttgttccttacgtattatttttatgaactttcatgaacatgttgttggaataactttaagagattttatattgaggccttc 26012654  T
Q  177 atgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
     ||||||||| ||||||||||||||||| ||||||||||||||||    
T  26012653 gtgccaaggtcgttttaaacgttgaaataatttccgctgcgaagt 26012609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 3484268 - 3484122
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||  ||||| ||    
T  3484268 gatgagaattttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttgaggcc 3484169  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
     || |||||| ||||||||||| |||| ||| ||||||||||||||||    
T  3484168 cttgtgccaaagttgttttaaaagttg-aataatttccgctgcgaagt 3484122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 14971491 - 14971580
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||    
T  14971491 gatgagaattttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagatttta 14971580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 50159611 - 50159522
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| ||||||    
T  50159611 gatgagaattttgtcattgctttccgttccttacgtattattttatgaagttttaagaacatgatgttggaacaattttatgagatttta 50159522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 15012151 - 15012289
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||  ||||| || || |||    
T  15012151 attttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttgaggcccttgtgc 15012250  T
Q  181 caaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||| |||||| | || ||| ||||||||||||||||    
T  15012251 caaagttg-tttaaaagatg-aataatttccgctgcgaagt 15012289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 221
Target Start/End: Complemental strand, 9637186 - 9637045
Alignment:
Q  78 agaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagaccttta 177  Q
    ||||||||||||||||||||| |||||||||||||||||||| || | | ||||||||||||||||||||| |||| || ||||||  ||||| ||||      
T  9637186 agaattttgttgttgctttctattccttacgtattattttataaactatcatgaacatgttgttggaataactttaagagattttatgttgagcccttgg 9637087  T
Q  178 tgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    |||||| | || |||||| |||| ||| | ||||||||||||||    
T  9637086 tgccaaagatg-tttaaatgttg-aataaattccgctgcgaagt 9637045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 15343618 - 15343500
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaat-aattttatgatattttacattgagac 172  Q
    |||| |||||||||||||||||||| |||||||||| ||||| |||||| ||| |||||||| |||||||||| |||||||||| |||| || ||||| |    
T  15343618 gatgggaattttgttgttgctttctattccttacgtgttattctatgaactttcatgaacatattgttggaataaattttatgagatttcacgttgaggc 15343519  T
Q  173 ctttatgccaaggttgttt 191  Q
    || | |||||| |||||||    
T  15343518 ctgtgtgccaaagttgttt 15343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 38106604 - 38106457
Alignment:
Q  74 gatgagaattttgttgttgcttt-ctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    |||||||| |||||| ||||||| || |||||||||||||||||||||||||   ||||  ||||||||||||||||||||||| ||||||| ||||| |    
T  38106604 gatgagaactttgttattgcttttctattccttacgtattattttatgaagtcc-atgattatgttgttggaataattttatgacattttacgttgaggc 38106506  T
Q  173 ctttatgcc-aaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    |||  |||| ||| |||||||||| |||| ||| | ||||||||||||||    
T  38106505 cttcgtgccaaagattgttttaaaagttg-aataaattccgctgcgaagt 38106457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 14943176 - 14943256
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattt 161  Q
    |||||||| || |||||||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||||| ||||    
T  14943176 attttgttattactttctgttccttacgtattattttatgaagttttaaggacatgatgttggaacaattttatgagattt 14943256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 4616572 - 4616716
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||||||| |||| | ||||| |||||||| |||||||||| ||||||  ||||| ||    
T  4616572 gatgagaattt-gttattgctttctgttccttacgtattgttttatgaag-tttaaggacatgatgttggaacaattttatgagattttatgttgaggcc 4616669  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||  |||||| | || ||||||  ||||||  |||| |||||||||||    
T  4616670 ttggtgccaaagatg-tttaaatattgaaacaattttcgctgcgaagt 4616716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 10704149 - 10704078
Alignment:
Q  90 ttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattt 161  Q
    |||||||||||||||||||||||  |||||||||||||| | |||||||||||||| |||||||||| ||||    
T  10704149 ttgctttctgttccttacgtattgctttatgaagttttaaggacatgttgttggaacaattttatgagattt 10704078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 10917919 - 10917848
Alignment:
Q  90 ttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattt 161  Q
    |||||||||||||||||||||||  |||||||||||||| | |||||||||||||| |||||||||| ||||    
T  10917919 ttgctttctgttccttacgtattgctttatgaagttttaaggacatgttgttggaacaattttatgagattt 10917848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 33245659 - 33245726
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgtt 141  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||||||| ||||||||    
T  33245659 gatgagaattttgttattgcttgttgttccttacgtattattttatgaacttttatgaagatgttgtt 33245726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 40906117 - 40906059
Alignment:
Q  82 ttttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgt 140  Q
    ||||||| ||| ||||||||||||| ||||||||||||||| ||| |||||||||||||    
T  40906117 ttttgttattgttttctgttccttatgtattattttatgaattttcatgaacatgttgt 40906059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 26045947 - 26046010
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatga 131  Q
    ||||| |||||||| |||| |||||||||||| |||||||||||||| |||||||||||| ||||    
T  26045947 gtaacgtgatgaga-ttttattgttgctttctattccttacgtattactttatgaagtttcatga 26046010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 26051128 - 26051191
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatga 131  Q
    ||||| |||||||| |||| |||||||||||| |||||||||||||| |||||||||||| ||||    
T  26051128 gtaacgtgatgaga-ttttattgttgctttctattccttacgtattactttatgaagtttcatga 26051191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 14650160 - 14650081
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgta-ttattttatgaagttttatgaacatgttg-ttggaataattt 151  Q
    |||| ||||||||||| ||||||||||| |||||||| |||| |||||||| |||||||  |||||| ||||||||||||    
T  14650160 gatgggaattttgttgctgctttctgttgcttacgtatttatcttatgaagctttatgattatgttgtttggaataattt 14650081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 14700979 - 14700900
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgta-ttattttatgaagttttatgaacatgttg-ttggaataattt 151  Q
    |||||||||||||||| |||||| ||||| ||||||| |||| |||||||| |||||||  || ||| ||||||||||||    
T  14700979 gatgagaattttgttgctgctttttgttcattacgtatttatcttatgaagctttatgattattttgtttggaataattt 14700900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 8582067 - 8582125
Alignment:
Q  74 gatgagaattttgttgttg-ctttctgttccttacgtattattttatgaagttttatga 131  Q
    |||||||||||| |||||| |||||| ||||||||||||| ||||| |||| |||||||    
T  8582067 gatgagaattttattgttgtctttctattccttacgtattgttttaagaagatttatga 8582125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 15042737 - 15042819
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||||||||||  ||||| ||||||||||||||  ||||||| ||| ||||| | ||||||| | | ||||||||| ||||||    
T  15042737 attttgttgttattttctattccttacgtattaccttatgaattttcatgaataagttgttgaattgattttatgagatttta 15042819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 15111687 - 15111605
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||||||||||  ||||| ||||||||||||||  ||||||| ||| ||||| | ||||||| | | ||||||||| ||||||    
T  15111687 attttgttgttattttctattccttacgtattaccttatgaattttcatgaataagttgttgaattgattttatgagatttta 15111605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 20159079 - 20159135
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatga 131  Q
    |||||||| |||||| ||||||||| ||||||||||||| |||| ||||| |||||||    
T  20159079 gatgagaactttgttattgctttctattccttacgtattgtttt-tgaagatttatga 20159135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 218
Target Start/End: Original strand, 33245721 - 33245754
Alignment:
Q  185 gttgttttaaacgttgaaatgatttccgctgcga 218  Q
    |||||||||||||||||||| |||||||||||||    
T  33245721 gttgttttaaacgttgaaataatttccgctgcga 33245754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 443206 - 443059
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  443206 gatgggaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgagattttacattgaggcc 443107  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  443106 tttgtgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 443059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 15119 - 14972
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||    
T  15119 gatgagaatttttttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataatttaatgagattttacattgaggcc 15020  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15019 tttgtgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 124; Significance: 6e-64; HSPs: 2)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 1016 - 869
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  1016 gatgagaattttgttgttgctttctgttccttacgtattatgttatgaagttttatgaacatgttgttggaataattttatgagattttacattgaggcc 917  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| ||||||||||||||||||||||||||| ||||||||||| ||||    
T  916 tttgtgccaaggttgttttaaacgttgaaataatttccgctgcaaagt 869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 7182 - 7035
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  7182 gatgagaattttgttgttgctttctgttccttacgtattatgttatgaagttttatgaacatgttgttggaataattttatgagattttacattgaggcc 7083  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| ||||||||||||||||||||||||||| ||||||||||| ||||    
T  7082 tttgtgccaaggttgttttaaacgttgaaataatttccgctgcaaagt 7035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 2e-61; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 7053792 - 7053939
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||    
T  7053792 gatgagaattttgctgttgctttatgttccttacgtattattttatgaagttttataaacatgttgttggaataattttatgagattttacattgaggcc 7053891  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| || |||||||||||||||||||||||||||||||||||||||||    
T  7053892 tttgtgtcaaggttgttttaaacgttgaaatgatttccgctgcgaagt 7053939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 48300199 - 48300057
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  48300199 gatgagaattttgttgttgttttatgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgagattttacattgaggcc 48300100  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||| |||||| ||||||||||||||| |||| |||||||||||    
T  48300099 tttgtgccaaagttgttttaaacgtttaaataatttccgctgc 48300057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 74 - 210
Target Start/End: Original strand, 20635403 - 20635540
Alignment:
Q  74 gatgagaattttg-ttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |    
T  20635403 gatgagaattttggttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttattggaataattttatgagattttacattgaggc 20635502  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttc 210  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  20635503 ctttgtgccaaggttgttttaaacgttgaaataatttc 20635540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 4597764 - 4597902
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||    
T  4597764 gatgggaattttgttgttgctttctattccttacgtattattttatgaagttttatgaacatgttgttggaataactttatgagattttacgttgaggcc 4597863  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccg 212  Q
    ||| ||||||||||||||||||||||||||| |||||||    
T  4597864 tttgtgccaaggttgttttaaacgttgaaataatttccg 4597902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 38888838 - 38888980
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  38888838 gatgataattttgttgttgctttctgttccttacgtataattttatgaagttttatgaacatgttgttggaataattttatgagattttaccttgaggcc 38888937  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||| || |||||||||||||||||||||||| ||||| |||||    
T  38888938 tttgtgtcaaggttgttttaaacgttgaaataatttctgctgc 38888980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 74 - 214
Target Start/End: Original strand, 16060080 - 16060220
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  16060080 gatgagaattttgttgttgctctttgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgagattttaccttgaggcc 16060179  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgct 214  Q
    ||| || ||||||||||||||||||| |||| |||||||||    
T  16060180 tttgtgtcaaggttgttttaaacgttaaaataatttccgct 16060220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 74 - 209
Target Start/End: Complemental strand, 42911226 - 42911090
Alignment:
Q  74 gatgagaattttg-ttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    ||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |    
T  42911226 gatgagaattttggttgttgttttctgttccttacatgttattttatgaagttttatgaacatgttattggaataattttatgagattttacattgaggc 42911127  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgattt 209  Q
      || || |||||||||||||||||||||||| ||||    
T  42911126 tattgtgtcaaggttgttttaaacgttgaaataattt 42911090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 38058324 - 38058470
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||| ||| | |||||||| |||||||||||||| ||| ||||||||||||||||||||| ||||  | ||||||  ||||| ||    
T  38058324 gatgagaattttgttgttgttttatattccttacatattattttatgaactttaatgaacatgttgttggaataacttta-aagattttatgttgaggcc 38058422  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||  ||||||||||||||||||||||||||| ||||||| ||||||||    
T  38058423 ttggtgccaaggttgttttaaacgttgaaataatttccgttgcgaagt 38058470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 216
Target Start/End: Original strand, 8277783 - 8277926
Alignment:
Q  63 atatgtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttt 162  Q
    |||||||||  ||||||| ||||||||||||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||| |||||    
T  8277783 atatgtaacgagatgagatttttgttgttgctttatgttccttacgtattatttt----------atgaacatgttgttggaataattttatgagatttt 8277872  T
Q  163 acattgagacctttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    || ||||| | ||| |||||||||||||||||| |||||||| |||| ||||||    
T  8277873 accttgaggcttttgtgccaaggttgttttaaatgttgaaataatttacgctgc 8277926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 41230198 - 41230119
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataatttta 153  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  |||||||    
T  41230198 gatgagaattttgttgttgctttctgttccttacgtatttatttatgaagttttatgaacatgttgttggatgaatttta 41230119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 51082201 - 51082347
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||||| | |  ||||||||||||||||| ||||||| || ||||||  ||||| ||    
T  51082201 gatgtgaattttgttgttgttttctattccttacgtattattttatgaattatcttgaacatgttgttggaagaattttaagagattttatgttgagccc 51082300  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
     || |||||| ||||||||||| |||| ||| ||||||| ||||||||    
T  51082301 cttgtgccaaagttgttttaaaagttg-aataatttccgatgcgaagt 51082347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 74 - 219
Target Start/End: Original strand, 14239313 - 14239457
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||| |||||||||| ||||| |||||||| |||||||||||||| | | |||||||||||||||||| ||||||| || ||||||  || || ||    
T  14239313 gatgagaagtttgttgttgttttctattccttacatattattttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttaaggcc 14239412  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaa 219  Q
     || |||||| ||||||||||| |||| ||| ||||||||||||||    
T  14239413 cttgtgccaaagttgttttaaaagttg-aataatttccgctgcgaa 14239457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 67 - 191
Target Start/End: Complemental strand, 45917898 - 45917773
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaat-aattttatgatattttaca 165  Q
    |||||| ||| |||||||||||||||| |||| |||||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||| ||||||      
T  45917898 gtaacaagataagaattttgttgttgccttctattccttacgtattattctatgaactttcatgaacatgttgttggaataaattttatgagattttatg 45917799  T
Q  166 ttgagacctttatgccaaggttgttt 191  Q
    ||||| ||| | |||||| |||||||    
T  45917798 ttgaggcctgtgtgccaaagttgttt 45917773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 79 - 221
Target Start/End: Complemental strand, 20043419 - 20043278
Alignment:
Q  79 gaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaat-aattttatgatattttacattgagaccttta 177  Q
    |||||||||||||||||| | |||||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||| | ||||| ||||| | | |     
T  20043419 gaattttgttgttgctttatattccttacgtattattctatgaactttcatgaacatgttgttggaataaattttatgagaatttacgttgaggcatgtg 20043320  T
Q  178 tgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    |||||| |||| |||||| |||| ||| ||||||||||||||||    
T  20043319 tgccaaagttg-tttaaatgttg-aataatttccgctgcgaagt 20043278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 218
Target Start/End: Original strand, 31207387 - 31207521
Alignment:
Q  80 aattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaat-aattttatgatattttacattgagacctttat 178  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||||||| | |||||||||| ||||||  ||||| || || |    
T  31207387 aattttgttgttgctttctgttccttacgtattattttatgaacttttatgaaca---tgttggactaaattttatgagattttatgttgaggcccttgt 31207483  T
Q  179 gccaaggttgttttaaacgttgaaatgatttccgctgcga 218  Q
    ||||| |||| |||||| |||||||| ||||||| |||||    
T  31207484 gccaaagttg-tttaaatgttgaaat-atttccgttgcga 31207521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 161
Target Start/End: Original strand, 44823592 - 44823682
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatg----ttgttggaataattttatgatattt 161  Q
    ||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||| | |||||    |||||||||||||||||||| ||||    
T  44823592 gatgagaattt-gttattgctttctgttccttacgtaatgttttatgaagttttaaggacatgttgtttgttggaataattttatgagattt 44823682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 52982755 - 52982716
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaa 122  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  52982755 tttgttgttgctttctattccttacgtattattttatgaa 52982716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 21043973 - 21044028
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatga 131  Q
    ||||||||||| ||| ||||||| |||||||||||||||| |||||||||||| ||||    
T  21043973 gatgagaattt-gttattgcttt-tgttccttacgtattactttatgaagtttcatga 21044028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 35607 - 35749
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  35607 gatgagaattttgttgttgctttctattccttacgtattattttatgaacttttatgaacatgttgttggaataattttatgagattttacattgaggcc 35706  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||| ||||||||||||||||||||||||||| |||||||||||    
T  35707 tttgtgccaaggttgttttaaacgttgaaataatttccgctgc 35749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 18303557 - 18303705
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgata-ttttacattgagac 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | |||||||||||| |    
T  18303557 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgtttgaataattgtatgagatttttacattgaggc 18303656  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  18303657 ctttgtgccaaggttgttttaaacgttgaaataatttccgctgcgaagt 18303705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 22206579 - 22206432
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||| |     
T  22206579 gatgagaattttgttattgctttttgttccttacgtattattttatgaactttcatgaacatgttgttggaataattttatgagattttacattgaggct 22206480  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  22206479 tttgtgccaaggttgttttaaacgttgaaataatttccgctgcgaagt 22206432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 5084181 - 5084323
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||| ||||| |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5084181 gatgtgaattatgttgttgctttctatttcttacgtattattttatgaacttttatgaacatgttgttggaataattttatgagattttacattgagacc 5084280  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||| ||||||||||||||||||||||||||| |||||||||||    
T  5084281 tttgtgccaaggttgttttaaacgttgaaataatttccgctgc 5084323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 23668746 - 23668598
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||    
T  23668746 gatgagaattttgttgtagctttctattcattacgtattattttatgaagttttatgaacatgttgttggaataattttatgagattttacatttaggcc 23668647  T
Q  174 tttatgccaaggttg-ttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| ||||||||||| |||||||||||||||| ||||||||||||||||    
T  23668646 tttgtgccaaggttgtttttaaacgttgaaataatttccgctgcgaagt 23668598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 45118731 - 45118874
Alignment:
Q  74 gatgagaattttg-ttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||  |    
T  45118731 gatgagaattttggttgttgctttctgttccttacgtattattttatgaagttttatgaatatgttattggaataattttatgagattttacattgatgc 45118830  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    |||| ||||||||||||||||||||||||||| |||||||||||    
T  45118831 ctttgtgccaaggttgttttaaacgttgaaataatttccgctgc 45118874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 84 - 216
Target Start/End: Complemental strand, 18832496 - 18832364
Alignment:
Q  84 ttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgccaa 183  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| ||||| ||||||    
T  18832496 ttgttattgctttctgttccttacgtattattttatgaagttttatgaacatgttgttgaaataattttatgagaatttacattgagccctttgtgccaa 18832397  T
Q  184 ggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||||||||||||||||||||| |||||||||||    
T  18832396 ggttgttttaaacgttgaaataatttccgctgc 18832364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 74 - 209
Target Start/End: Original strand, 39937761 - 39937896
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||| ||    
T  39937761 gatgggaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttattggaattattttatgagattgtacattgaggcc 39937860  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgattt 209  Q
    ||| |||||||||||||||||| |||||||| ||||    
T  39937861 tttgtgccaaggttgttttaaaagttgaaataattt 39937896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 13665911 - 13666028
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||    
T  13665911 gatgagaattttgttgttgctttctattccttacatattattttatgaagttttataaacatgttgttggaataattttatgagattttacattgaggcc 13666010  T
Q  174 tttatgccaaggttgttt 191  Q
    ||| ||||||||||||||    
T  13666011 tttgtgccaaggttgttt 13666028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 13725186 - 13725303
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||    
T  13725186 gatgagaattttgttgttgctttctattccttacatattattttatgaagttttataaacatgttgttggaataattttatgagattttacattgaggcc 13725285  T
Q  174 tttatgccaaggttgttt 191  Q
    ||| ||||||||||||||    
T  13725286 tttgtgccaaggttgttt 13725303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 67 - 221
Target Start/End: Original strand, 22260979 - 22261134
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttgg-aataattttatgatattttaca 165  Q
    |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||| ||| ||| ||||||||||||| ||||||||    
T  22260979 gtaacaggatgagaattttgttattgctttatgttccttacgtattattttatgaa-tttaatgaacattttgatggaaataattttatgagattttaca 22261077  T
Q  166 ttgagacctttatgccaaggttgtttt-aaacgttgaaatgatttccgctgcgaagt 221  Q
    ||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||    
T  22261078 ttgaggcctttgtgccaaggttgttttaaaacgttgaaataatttccgctgcgaagt 22261134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 22238933 - 22239080
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattatttt-atgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||| || |||||| |||||| |    
T  22238933 gatgagaattt-gttgttgctttctgttccttacgtattatttttatgaactttcatgaacatgttgttggaataactttaagagattttatattgaggc 22239031  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    |||  |||||||||  ||||||||||| |||| ||||||||||||||||    
T  22239032 cttcgtgccaaggtcattttaaacgttcaaataatttccgctgcgaagt 22239080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 42819805 - 42819945
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    ||||||||| |  ||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||| |||| |  ||||||  ||||| ||||  |||    
T  42819805 attttgttgctattttctattccttacgtattactttatgaactttcatgaacatgttgttggaataactttaagggattttatgttgaggccttggtgc 42819904  T
Q  181 caaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  42819905 caaagttgttttaaacgttgaaatgatttccgctgcgaagt 42819945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 221
Target Start/End: Original strand, 19930294 - 19930434
Alignment:
Q  80 aattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataa-ttttatgatattttacattgagacctttat 178  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  || |||||||| ||||||  ||||| || || |    
T  19930294 aattttgttgttgctttctgttccttacgtatttatttatgaagttttatgaacatgttgttggatgaacttttatgagattttatgttgaggcccttgt 19930393  T
Q  179 gccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||||| |||| |||||| |||| ||| | ||||||||||||||    
T  19930394 gccaaagttg-tttaaatgttg-aataaattccgctgcgaagt 19930434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 163
Target Start/End: Original strand, 29764432 - 29764526
Alignment:
Q  69 aacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||| |||| ||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| || ||||||    
T  29764432 aacaggatgtgaattttgttgttactttctattccttacgtattattttatgaactttcatgaacatgttgttggaataactttaagagatttta 29764526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 74 - 218
Target Start/End: Original strand, 22921351 - 22921495
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaat-aattttatgatatttta-cattgaga 171  Q
    |||| ||||||| |||||| ||||||||| |||||||||| |  ||||| ||| ||||||||||||||||||| |||||||||| |||||| | |||||     
T  22921351 gatgggaattttattgttgttttctgttcgttacgtattaatcaatgaactttcatgaacatgttgttggaataaattttatgagattttaccgttgagg 22921450  T
Q  172 cctttatgccaaggttgttttaaacgttgaaatgatttccgctgcga 218  Q
    ||||| |||||||||| ||||| | |||| ||| |||||||||||||    
T  22921451 cctttgtgccaaggtt-ttttagatgttg-aataatttccgctgcga 22921495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 216
Target Start/End: Original strand, 23944749 - 23944827
Alignment:
Q  138 tgttggaataattttatgatattttacattgagacctttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||||||||||||||||||  ||||||| ||||| ||||| ||| ||||||| ||||||||||||||| |||||||||||    
T  23944749 tgttggaataattttatgggattttaccttgaggcctttgtgctaaggttggtttaaacgttgaaataatttccgctgc 23944827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 142
Target Start/End: Original strand, 20502776 - 20502856
Alignment:
Q  63 atatgtaacatgatgagaattttgttgttgcttt-ctgttccttacgtattattttatgaagttttatgaacatgttgttg 142  Q
    |||||||||  |||||||| |||||| ||||||| || |||||||||||||| |||||||| ||| ||||| | |||||||    
T  20502776 atatgtaacgggatgagaactttgttattgcttttctattccttacgtattactttatgaattttcatgaataagttgttg 20502856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 32120914 - 32120862
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttt 126  Q
    |||| |||||||||||||||||||| |||||||||||||  || |||||||||    
T  32120914 gatgggaattttgttgttgctttctattccttacgtattgcttaatgaagttt 32120862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 22253867 - 22253919
Alignment:
Q  90 ttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttg 142  Q
    ||||||||| |||||||||||||| ||||| |||||| ||||| | |||||||    
T  22253867 ttgctttctattccttacgtattactttataaagtttcatgaataagttgttg 22253919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 29332901 - 29332953
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttt 126  Q
    ||||||||||||||| ||||||||| ||| |||||||||  || |||||||||    
T  29332901 gatgagaattttgttattgctttctattcattacgtattgcttaatgaagttt 29332953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 41055343 - 41055195
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||    
T  41055343 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttataagattttacattgaggcc 41055244  T
Q  174 tttatgccaaggttgtttt-aaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| ||||||||||||||| ||| |||||||| ||||||||||||||||    
T  41055243 tttgtgccaaggttgttttaaaatgttgaaataatttccgctgcgaagt 41055195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 74 - 212
Target Start/End: Complemental strand, 15172190 - 15172052
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||    
T  15172190 gatgagaattttgttgttgctttctgttccttacatattattttatgaagttttatgaacatcttgttggaataatattatgagattttacattgagacc 15172091  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccg 212  Q
    ||| | ||||||||||||||||||||||||| |||||||    
T  15172090 tttgtaccaaggttgttttaaacgttgaaataatttccg 15172052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 19281079 - 19280937
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||| ||    
T  19281079 gatgagaattttgttgttgctttttattccttacgtattattttatgaaattttatgaacatgttgttggaataattttatgagattttaccttgaggcc 19280980  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||| ||||||||||||||||||||||||||| |||||||||||    
T  19280979 tttgtgccaaggttgttttaaacgttgaaataatttccgctgc 19280937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 15719218 - 15719075
Alignment:
Q  74 gatgagaattttg-ttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| |    
T  15719218 gatgggaattttggttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttattggaataatattatgagattttacattgaggc 15719119  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    |||| ||||||||||||||||||||||||||| |||||||||||    
T  15719118 ctttgtgccaaggttgttttaaacgttgaaataatttccgctgc 15719075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 75 - 221
Target Start/End: Complemental strand, 16437836 - 16437689
Alignment:
Q  75 atgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacct 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| | |    
T  16437836 atgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttattggaataattttataagattttacattgaggctt 16437737  T
Q  175 ttatgccaaggttgtttt-aaacgttgaaatgatttccgctgcgaagt 221  Q
    || ||||||||||||||| ||| |||||||| ||||||||||||||||    
T  16437736 ttgtgccaaggttgttttaaaatgttgaaataatttccgctgcgaagt 16437689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 74 - 218
Target Start/End: Complemental strand, 20618581 - 20618437
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| | |||||||| || ||    
T  20618581 gatgggaattttgttgttgctttctattccttacgtattattttatgaactttcatgaacatgttgttggaattattttatgagaatttacattcaggcc 20618482  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcga 218  Q
    ||| ||||||||||||||||||||||||||| |||||||||||||    
T  20618481 tttgtgccaaggttgttttaaacgttgaaataatttccgctgcga 20618437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 20584584 - 20584441
Alignment:
Q  74 gatgagaattttg-ttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||||||||| |    
T  20584584 gatgggaattttggttgttgctttctgttccttacgtattattttatgaagttttatgaacatattattgaaataattttatgagattttacattgaggc 20584485  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    |||| |||||||||| |||||||||||||||| |||||||||||    
T  20584484 ctttgtgccaaggttattttaaacgttgaaataatttccgctgc 20584441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 75 - 221
Target Start/End: Original strand, 47976822 - 47976969
Alignment:
Q  75 atgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataat-tttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||    ||||||| ||||||||||||| ||    
T  47976822 atgagaattttgttgttgctttctgttccttacgtattactttatgaaactttatgaacatgttgttggaattccgtttatgagattttacattgaggcc 47976921  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||||| |||||||||||||||||||| ||||||||||||||||    
T  47976922 tttgtgccaaagttgttttaaacgttgaaataatttccgctgcgaagt 47976969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 12757805 - 12757963
Alignment:
Q  61 ttatatgtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatt 160  Q
    ||||| |||||  |||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||| | |||    
T  12757805 ttatacgtaacgggatgggaattttgttgttgttttctgttccttacgtattattttatgatgttttatgaaca---tgttggaataattttataagatt 12757901  T
Q  161 ttacattgagacctttatgccaaggttgtttt-aaacgttgaaatgatttccgctgcgaagt 221  Q
    |||||||||| ||||| ||||||||||||||| ||| |||||||| ||||||||||||||||    
T  12757902 ttacattgaggcctttgtgccaaggttgttttaaaatgttgaaataatttccgctgcgaagt 12757963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 14162631 - 14162778
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||| |||||||||||||||||||| |||||||||||||| |||||||| | | |||||||||||||||||||||  ||| || ||||||  ||||| ||    
T  14162631 gatgggaattttgttgttgctttctattccttacgtattactttatgaactatcatgaacatgttgttggaataaccttaagagattttatgttgaggcc 14162730  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||  ||||||||||||||||||||||||||| ||||| ||||||||||    
T  14162731 ttggtgccaaggttgttttaaacgttgaaataatttctgctgcgaagt 14162778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 12467125 - 12467267
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||  ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||  ||||| |||    
T  12467125 attttgttgttattttctattccttacatattattttatgaagttttatgaatatgttgttggaataattttatgagattttaccttgacgcctttgtgc 12467224  T
Q  181 caaggttgtttt-aaacgttgaaatga-tttccgctgcgaagt 221  Q
    |||||||||||| |||||||||| | | |||||||||||||||    
T  12467225 caaggttgttttaaaacgttgaactaattttccgctgcgaagt 12467267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 43278417 - 43278563
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| || ||||||||||| |||||| ||||  | ||||||  ||||| ||    
T  43278417 gatgaaaattttgttattgctttctgttccttacgtattattttatgaactttcataaacatgttgtttgaataacttta-aagattttatgttgaggcc 43278515  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||  |||||||||||||||||| |||||||| ||||||||||||||||    
T  43278516 ttggtgccaaggttgttttaaatgttgaaataatttccgctgcgaagt 43278563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 217
Target Start/End: Original strand, 44191465 - 44191607
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaat-aattttatgatattttacattgagac 172  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||| ||||||| ||||| |    
T  44191465 gatgagaattttgttgttgctttctattccttacgtattattctatgaactttcatgaacatgttgttggaataaattttatgagattttacgttgaggc 44191564  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgctgcg 217  Q
     | | |||||| |||| |||||| |||| ||| ||||||||||||    
T  44191565 atgtgtgccaaagttg-tttaaatgttg-aataatttccgctgcg 44191607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 3286403 - 3286314
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||| || ||||||    
T  3286403 gatgggaattttgttgttgctttctgttccttacgtaattttttatgaagttttatgaacatgttgttggaataactttaagagatttta 3286314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 32161884 - 32161973
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| || ||||||    
T  32161884 gatgagaattttgttgttgctttctattccttacgtattattttatgaactttcatgaacatgttgttggaataactttaagagatttta 32161973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 14257172 - 14257034
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||  ||||| || || |||    
T  14257172 attttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttgaggcccttgtgc 14257073  T
Q  181 caaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||| |||||| |||| ||| |||| |||||||||||    
T  14257072 caaagttg-tttaaaagttg-aataattttcgctgcgaagt 14257034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 32300103 - 32299965
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||  ||||| || || |||    
T  32300103 attttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttgaggcccttgtgc 32300004  T
Q  181 caaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||| |||| | |||| ||| ||||||||||||||||    
T  32300003 caaagttg-tttacaagttg-aataatttccgctgcgaagt 32299965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 191
Target Start/End: Original strand, 39432285 - 39432398
Alignment:
Q  79 gaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaa-taattttatgatattttacattgagaccttta 177  Q
    |||||||||||||| ||||| |||||||| ||||||| |||||| ||| ||||||||||||||||||  |||||||||| ||||||| ||||| |||||     
T  39432285 gaattttgttgttgttttctattccttacatattattctatgaactttcatgaacatgttgttggaagaaattttatgagattttacgttgaggcctttg 39432384  T
Q  178 tgccaaggttgttt 191  Q
    |||||| |||||||    
T  39432385 tgccaaagttgttt 39432398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 153
Target Start/End: Original strand, 18876631 - 18876710
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataatttta 153  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||| ||| ||||||||||||||| ||||| ||||    
T  18876631 gatgagaattttgttgttgctttatattccttacgtattattttatgaactttcatgaacatgttgttgaaataacttta 18876710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 8757876 - 8758011
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgcca 182  Q
    |||||| |||||||||||||||||| ||||| ||||||||| |||| ||||||| |||||||| |||||||||| ||||||  ||||| ||||  |||||    
T  8757876 tttgttattgctttctgttccttacatatta-tttatgaag-tttaagaacatgatgttggaacaattttatgagattttatgttgaggccttggtgcca 8757973  T
Q  183 aggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    | | || ||||||  ||||||| ||||| ||||||||||    
T  8757974 aagatg-tttaaatattgaaataatttctgctgcgaagt 8758011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 23556127 - 23555992
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgcca 182  Q
    |||||| ||| |||||||||||||||||||| ||||||||| |||| ||||||| |||||||| |||||||||| ||||||  ||||| ||||  |||||    
T  23556127 tttgttattgttttctgttccttacgtatta-tttatgaag-tttaagaacatgatgttggaacaattttatgagattttatgttgaggccttggtgcca 23556030  T
Q  183 aggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    | | || ||||||  ||||||| ||||| ||||||||||    
T  23556029 aagatg-tttaaatattgaaataatttctgctgcgaagt 23555992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 4324431 - 4324343
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    ||||||||||| ||| ||||||| ||||||||||||||| ||||||||||||||| | ||| |||||| ||| |||||||||| ||||||    
T  4324431 gatgagaattt-gttattgctttatgttccttacgtattgttttatgaagttttaaggacaagttgttagaacaattttatgagatttta 4324343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 23557294 - 23557171
Alignment:
Q  95 ttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgccaaggttgttttaa 194  Q
    ||||||||||||||||||| ||||||||| |||| ||||||| |||||||| |||||||||| ||||||  ||||  ||||  |||||| | || |||||    
T  23557294 ttctgttccttacgtatta-tttatgaag-tttaagaacatgatgttggaacaattttatgagattttatgttgaagccttggtgccaaagatg-tttaa 23557198  T
Q  195 acgttgaaatgatttccgctgcgaagt 221  Q
    |  ||||||| ||||||||||||||||    
T  23557197 atattgaaataatttccgctgcgaagt 23557171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 22123224 - 22123310
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    ||||||||||| ||| ||| |||||||||||||||||||| ||||||||| |||| ||||||| |||||||| |||||||||| ||||||    
T  22123224 gatgagaattt-gttattgttttctgttccttacgtatta-tttatgaag-tttaagaacatgatgttggaacaattttatgagatttta 22123310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 40556425 - 40556511
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    ||||||||||| ||| ||| |||||||||||||||||||| ||||||||| |||| ||||||| |||||||| |||||||||| ||||||    
T  40556425 gatgagaattt-gttattgttttctgttccttacgtatta-tttatgaag-tttaagaacatgatgttggaacaattttatgagatttta 40556511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 42461412 - 42461362
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatga 131  Q
    |||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  42461412 attttgttgttgctttctattccttacgtattactttatgaagtttcatga 42461362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 18422938 - 18422886
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttt 126  Q
    ||||||||||||||||||||||||| |||||||||||||  || |||||||||    
T  18422938 gatgagaattttgttgttgctttctattccttacgtattgcttaatgaagttt 18422886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 24274204 - 24274157
Alignment:
Q  79 gaattttgttgttgctttctgttccttacgtattattttatgaagttt 126  Q
    |||||||||||||||||||| |||||||||||||  || |||||||||    
T  24274204 gaattttgttgttgctttctattccttacgtatttcttaatgaagttt 24274157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 16995677 - 16995619
Alignment:
Q  74 gatgagaattttgttgttgcttt-ctgttccttacgtattattttatgaagttttatga 131  Q
    |||| ||| |||||| ||||||| || ||||||||||||||||||||||||||| ||||    
T  16995677 gatgggaactttgttattgcttttctattccttacgtattattttatgaagtttcatga 16995619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 37794310 - 37794375
Alignment:
Q  63 atatgtaacatgatgagaattttgttgt-tgcttt-ctgttccttacgtattattttatgaagttt 126  Q
    |||||||||| |||||||| |||||||  |||||| || |||||||||||||| ||||||||||||    
T  37794310 atatgtaacaggatgagaactttgttgcatgcttttctattccttacgtattactttatgaagttt 37794375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 131
Target Start/End: Complemental strand, 16581874 - 16581822
Alignment:
Q  80 aattttgttgttg-ctttctgttccttacgtattattttatgaagttttatga 131  Q
    ||||||||||||| |||||| ||||||||||||| ||||| |||| |||||||    
T  16581874 aattttgttgttgtctttctattccttacgtattgttttaagaagatttatga 16581822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 1e-59; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 74 - 214
Target Start/End: Complemental strand, 23655346 - 23655206
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  23655346 gatgagaattttgttgttgctttctgttccttacgtattattctatgaagttttatgaacatgttgttggaataattttatgagattttacattgaggcc 23655247  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgct 214  Q
    ||| |||||||||| |||||||||||||||| |||||||||    
T  23655246 tttgtgccaaggtttttttaaacgttgaaataatttccgct 23655206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 27127204 - 27127346
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |     
T  27127204 gatgagaattttgttgctgctttctattccttatgtattattttatgaagttttatgaacatgttgttggaataattttatgagattttaccttgaggct 27127303  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||| ||||||||||||||||||||||||||| |||||||||||    
T  27127304 tttgtgccaaggttgttttaaacgttgaaataatttccgctgc 27127346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 80 - 221
Target Start/End: Original strand, 23083732 - 23083872
Alignment:
Q  80 aattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatg 179  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||| ||    
T  23083732 aattttgttgttgctttctgttccttacgtattattttatgtagttttatgaacatgttgttggaataa-tttatgagattttacattgaggcctttgtg 23083830  T
Q  180 ccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    || |||||||||||||||||||||| ||||||||| ||||||    
T  23083831 cctaggttgttttaaacgttgaaataatttccgctacgaagt 23083872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 31732796 - 31732654
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||| ||||||||| ||||||||||||| ||    
T  31732796 gatgagaattttgttgttgctttctgtttcttacgtattattttatgaagttttatgaacatcttattggaattattttatgagattttacattgaggcc 31732697  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||| |||||||| |||||||||||||||||| ||||| |||||    
T  31732696 tttgtgccaaggatgttttaaacgttgaaataatttctgctgc 31732654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 88 - 216
Target Start/End: Complemental strand, 1642233 - 1642104
Alignment:
Q  88 tgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgccaaggtt 187  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||    
T  1642233 tgttgctttctgttacttacgtattattttatgaagttttatgaacatgttgttggaataattttataagattttacattgaggcctttgtgccaaggtt 1642134  T
Q  188 gttttaa-acgttgaaatgatttccgctgc 216  Q
    ||||||| | |||||||| |||||||||||    
T  1642133 gttttaagaagttgaaataatttccgctgc 1642104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 75 - 218
Target Start/End: Original strand, 15892751 - 15892895
Alignment:
Q  75 atgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacct 174  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||  |||||  ||||| |||    
T  15892751 atgagaattttgttgttgctttcttttccttacatattattttatgaagttttatgaacatgttgttggaataactttaagaggttttatgttgaggcct 15892850  T
Q  175 ttatgccaaggttg-ttttaaacgttgaaatgatttccgctgcga 218  Q
    |  ||||||||||| ||||||| |||||||| |||||||||||||    
T  15892851 tggtgccaaggttgtttttaaatgttgaaataatttccgctgcga 15892895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 75 - 221
Target Start/End: Original strand, 19830701 - 19830837
Alignment:
Q  75 atgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacct 174  Q
    |||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||| ||||||| ||||||||||||| |||    
T  19830701 atgagaattttgttgttgctttctgttccttacgtattatttt----------atgaacatgttgttggaataactttatgagattttacattgaggcct 19830790  T
Q  175 ttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    || ||||||||||||||||||||||||| | |||| || ||||||||    
T  19830791 ttgtgccaaggttgttttaaacgttgaactaattttcgttgcgaagt 19830837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 80 - 221
Target Start/End: Original strand, 20077605 - 20077746
Alignment:
Q  80 aattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatg 179  Q
    |||||||||||| |||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||| | || || ||||||  ||||| ||||   |    
T  20077605 aattttgttgtttctttctattccttatgtattattttatgaactttcatgaacatgttgttggaataactataagagattttatgttgaggccttgggg 20077704  T
Q  180 ccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||||||||||||||| ||||||||  ||||||||||||||||    
T  20077705 ccaaggttgttttaaccgttgaaacaatttccgctgcgaagt 20077746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 215
Target Start/End: Original strand, 23086786 - 23086909
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||                  |||||||||||| ||||||||||||| ||    
T  23086786 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttt------------------ataattttatgagattttacattgaggcc 23086867  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctg 215  Q
    ||| ||||||||||||||||||||||||||| ||||||||||    
T  23086868 tttgtgccaaggttgttttaaacgttgaaataatttccgctg 23086909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 183
Target Start/End: Original strand, 30677355 - 30677471
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacat 166  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| |||||||  | ||||||  |    
T  30677355 gtaacaggatgagaattttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaaaagattttatgt 30677454  T
Q  167 tgagacctttatgccaa 183  Q
    ||||||| || ||||||    
T  30677455 tgagacccttgtgccaa 30677471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 18655685 - 18655548
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgcca 182  Q
    |||||| ||||||| ||||||||||||||| ||||||||||||||| | |||||||||||||| || ||||||| ||||||| ||||| ||| | |||||    
T  18655685 tttgttattgctttatgttccttacgtattgttttatgaagttttaaggacatgttgttggaacaagtttatgagattttacgttgaggcctgtgtgcca 18655586  T
Q  183 aggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    | | || ||||||  ||||||| ||||||||||||||||    
T  18655585 aagatg-tttaaatattgaaataatttccgctgcgaagt 18655548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 74 - 183
Target Start/End: Original strand, 19657423 - 19657532
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||| | | ||||||||||||||||||||| |||| || ||||||  ||||| ||    
T  19657423 gatgaaaattttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaataactttaagagattttatgttgaggcc 19657522  T
Q  174 tttatgccaa 183  Q
     |||||||||    
T  19657523 cttatgccaa 19657532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 15706593 - 15706731
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||  ||||| || |  |||    
T  15706593 attttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttgaggccctcgtgc 15706692  T
Q  181 caaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||| |||||| |||| ||| ||||||||||||||||    
T  15706693 caaagttg-tttaaaagttg-aataatttccgctgcgaagt 15706731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 19774876 - 19775014
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||  ||||| |  || |||    
T  19774876 attttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttgaggcacttgtgc 19774975  T
Q  181 caaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||| |||||| |||| ||| ||||||||||||||||    
T  19774976 caaagttg-tttaaaagttg-aataatttccgctgcgaagt 19775014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 67 - 161
Target Start/End: Complemental strand, 610368 - 610275
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattt 161  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||| ||||||||||||||| | |||||||||||||| |||||||||| ||||    
T  610368 gtaacatgatgagaattt-gttattgctttctgttccttgcgtattgttttatgaagttttaaggacatgttgttggaacaattttatgagattt 610275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 22804674 - 22804564
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||  ||||| || || |||    
T  22804674 attttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttgaggcccttttgc 22804575  T
Q  181 caaggttgttt 191  Q
    ||| |||||||    
T  22804574 caaagttgttt 22804564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 12389065 - 12388928
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgcca 182  Q
    |||||| ||||||| ||||||||| ||||| ||||||||||||||| | |||||||||| ||| |||||||||| ||||||  ||||| ||||  |||||    
T  12389065 tttgttattgctttatgttccttaagtattgttttatgaagttttaaggacatgttgtttgaacaattttatgagattttatgttgaggccttggtgcca 12388966  T
Q  183 aggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    | | || ||||||  ||||||| ||||||||||||||||    
T  12388965 aagatg-tttaaatattgaaataatttccgctgcgaagt 12388928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 74 - 139
Target Start/End: Original strand, 22377327 - 22377392
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttg 139  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||||||||    
T  22377327 gatgagaattttgttgttgctttctattccttacgtactattttatgaactttcatgaacatgttg 22377392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 20078814 - 20078882
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttg 142  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||| | |||||||    
T  20078814 gatgggaattttgttgttgctttctgttccttacgtattactttatgaagtttcatgaataagttgttg 20078882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 152
Target Start/End: Complemental strand, 16244780 - 16244702
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataatttt 152  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||  | |||| |||||||| ||||||    
T  16244780 gatgagaattttgttattgttttctgtttcttacgtattattttatgaagttttaatagcatgatgttggaacaatttt 16244702  T

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Target: chr6; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 175
Target Start/End: Original strand, 18260624 - 18260720
Alignment:
Q  80 aattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaat-aattttatgatattttacattgagacctt 175  Q
    |||||| | |||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||| | |||||||| | ||||||| ||||| ||||    
T  18260624 aattttttcgttgctttcgattccttacgtattattttatgaactttcatgaacatgttgttggattaaattttataagattttacgttgaggcctt 18260720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 17230341 - 17230411
Alignment:
Q  83 tttgttgttgctttctgttccttacgta-ttattttatgaagttttatgaacatgttg-ttggaataattt 151  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||  |||||| ||||||||||||    
T  17230341 tttgttgttgctttctgttccttacgtatttatcttatgaagttttatgattatgttgtttggaataattt 17230411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 34962552 - 34962500
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttt 126  Q
    ||||||||||||||||||||||||| |||||||||||||| || |||||||||    
T  34962552 gatgagaattttgttgttgctttctattccttacgtattacttaatgaagttt 34962500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 15895374 - 15895323
Alignment:
Q  92 gctttctgttccttacgtattattttatgaagttttatgaacatgttgttgg 143  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||    
T  15895374 gctttctgttccttacttattattttatgaactttcatgaacatgttgttgg 15895323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 18452675 - 18452608
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttg 142  Q
    ||||||||||| ||| ||||||||| |||||||||||||| |||||||||||| ||||| | |||||||    
T  18452675 gatgagaattt-gttattgctttctattccttacgtattactttatgaagtttcatgaataagttgttg 18452608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 20136104 - 20136032
Alignment:
Q  85 tgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttgga-ataattttatga 156  Q
    |||| ||| |||||||||||||||||||| |||||||||||| ||||  ||||||| |||  |||||||||||    
T  20136104 tgttattgttttctgttccttacgtattactttatgaagtttcatgactatgttgtcggatttaattttatga 20136032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 20184670 - 20184610
Alignment:
Q  84 ttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttgga 144  Q
    ||||| ||||||||| ||||||||||||| ||||||||  ||||||||  |||||||||||    
T  20184670 ttgttattgctttctattccttacgtattgttttatgagattttatgactatgttgttgga 20184610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 22151321 - 22151381
Alignment:
Q  84 ttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttgga 144  Q
    ||||| ||||||||| ||||||||||||| ||||||||  ||||||||  |||||||||||    
T  22151321 ttgttattgctttctattccttacgtattgttttatgagattttatgactatgttgttgga 22151381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 22196765 - 22196837
Alignment:
Q  85 tgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttgga-ataattttatga 156  Q
    |||| ||| |||||||||||||||||||| |||||||||||| ||||  ||||||| |||  |||||||||||    
T  22196765 tgttattgttttctgttccttacgtattactttatgaagtttcatgactatgttgtcggatttaattttatga 22196837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 23991689 - 23991637
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttt 126  Q
    |||| |||||||||||||||||||| |||||||||||||  || |||||||||    
T  23991689 gatgggaattttgttgttgctttctattccttacgtattgcttaatgaagttt 23991637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 200
Target Start/End: Original strand, 22213020 - 22213137
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    ||||||||||||||| || ||||| ||||||||   |||||| ||| ||||||||||||||||| |||  |||||| |||| |  ||||| || || |||    
T  22213020 attttgttgttgctt-ctattcctgacgtattaaactatgaattttcatgaacatgttgttggattaaacttatgagatttcatgttgaggcccttgtgc 22213118  T
Q  181 caaggttgttttaaacgttg 200  Q
    ||| |||| |||||||||||    
T  22213119 caaagttg-tttaaacgttg 22213137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 218
Target Start/End: Complemental strand, 25806484 - 25806386
Alignment:
Q  123 gttttatgaacatgttgttggaat--aattttatgatattttacattga-gacctttatgccaaggttgttttaaacgttgaaatgatttccgctgcga 218  Q
    ||||||||||||||||||||||||  |||||||||| ||||||| |||| | | | | |||||| ||| |||||||  ||||||| ||||||| |||||    
T  25806484 gttttatgaacatgttgttggaatgaaattttatgagattttacgttgatggcttgtgtgccaaagttattttaaatattgaaataatttccgttgcga 25806386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 20181659 - 20181579
Alignment:
Q  63 atatgtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttgga 144  Q
    |||||||||  |||||||| || ||| ||||||||| ||||||||||||| ||||||||  ||| ||||  |||||||||||    
T  20181659 atatgtaacgagatgagaactt-gttattgctttctattccttacgtattgttttatgagatttaatgactatgttgttgga 20181579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 22154332 - 22154412
Alignment:
Q  63 atatgtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttgga 144  Q
    |||||||||  |||||||| || ||| ||||||||| ||||||||||||| ||||||||  ||| ||||  |||||||||||    
T  22154332 atatgtaacgagatgagaactt-gttattgctttctattccttacgtattgttttatgagatttaatgactatgttgttgga 22154412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 16492592 - 16492544
Alignment:
Q  94 tttctgttccttacgtattattttatgaagttttatgaacatgttgttg 142  Q
    ||||| |||||||||||||| |||||||| ||||||||| | |||||||    
T  16492592 tttctattccttacgtattactttatgaatttttatgaataagttgttg 16492544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 17740903 - 17740804
Alignment:
Q  63 atatgtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttt 162  Q
    |||||||||  ||||||| ||||||||||  ||| | ||||||||||||||  ||||||| ||| ||||| | ||||||| | | ||||||||| |||||    
T  17740903 atatgtaacgggatgaga-ttttgttgttattttatattccttacgtattaccttatgaattttcatgaataagttgttgaattgattttatgagatttt 17740805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1815 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold1815
Description:

Target: scaffold1815; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 295 - 148
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||    
T  295 gatgagaattttgctgttgctttatgttccttacgtattattttatgaagttttataaacatgttgttggaataattttatgagattttactttgaggcc 196  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| || |||||||||||||||||||||||||||||||||||||||||    
T  195 tttgtgtcaaggttgttttaaacgttgaaatgatttccgctgcgaagt 148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 4e-59; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 45533349 - 45533496
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| || |     
T  45533349 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacacgttgttggaataattttatgagattttacattaaggcg 45533448  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| ||||||||||||||||||||||||||| ||||||| ||||||||    
T  45533449 tttgtgccaaggttgttttaaacgttgaaataatttccgttgcgaagt 45533496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 4853164 - 4853022
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  4853164 gatgagaattttgttgttgctttacgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgagattttacattgaggcc 4853065  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||| ||||||||||||||||||||||||| | |||||||||||    
T  4853064 tttgtgccaaggttgttttaaacgttgaactaatttccgctgc 4853022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 4874898 - 4874756
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  4874898 gatgagaattttgttgttgctttacgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgagattttacattgaggcc 4874799  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||| ||||||||||||||||||||||||| | |||||||||||    
T  4874798 tttgtgccaaggttgttttaaacgttgaactaatttccgctgc 4874756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 42355445 - 42355593
Alignment:
Q  74 gatgagaattttg-ttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |    
T  42355445 gatgagaattttggttgttgctttttgttccttacgtattattttatgaagttttatgaacatgttattggaataattttatgacattttacattgaggc 42355544  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    |||| |||| |||||||||||||||||||||| ||||||||||||||||    
T  42355545 ctttgtgccgaggttgttttaaacgttgaaataatttccgctgcgaagt 42355593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 74 - 212
Target Start/End: Complemental strand, 44268777 - 44268638
Alignment:
Q  74 gatgagaattttgtt-gttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||| |    
T  44268777 gatgagaattttgtttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttattagaataattttatgagattttacattgaggc 44268678  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccg 212  Q
    |||| ||||||||||||||||||||||||||| |||||||    
T  44268677 ctttgtgccaaggttgttttaaacgttgaaataatttccg 44268638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 67 - 212
Target Start/End: Complemental strand, 10561989 - 10561844
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacat 166  Q
    |||||| ||||  ||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10561989 gtaacaggatggaaattttgttgttgctttatgttctttacgttttattttatgaagttttatgaacatgttgttggaataattttatgagattttacat 10561890  T
Q  167 tgagacctttatgccaaggttgttttaaacgttgaaatgatttccg 212  Q
    |||| ||||| ||||||||||||||||||||||||||| |||||||    
T  10561889 tgaggcctttgtgccaaggttgttttaaacgttgaaataatttccg 10561844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 19885518 - 19885657
Alignment:
Q  74 gatgagaattttg-ttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |    
T  19885518 gatgtgaattttggttgttgctttatgttccttacgtattattttatgaagttttatgaacatgttattggaataattttatgagattttacattgaggc 19885617  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccg 212  Q
    |||| |||||| |||||||||||||||||||| |||||||    
T  19885618 ctttgtgccaatgttgttttaaacgttgaaataatttccg 19885657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 2843183 - 2843325
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||    
T  2843183 gatgggaattttgttgttgttttctgttccttacgtattattctatgaagttttatgaacatgttgttggaataactttatgagattttacattgaggcc 2843282  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||  ||||||||||||||||||| ||||| | |||||||||||    
T  2843283 ttggtgccaaggttgttttaaacattgaagtaatttccgctgc 2843325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 74 - 188
Target Start/End: Original strand, 14154356 - 14154470
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||    
T  14154356 gatgagaattttgttgttgctttatgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttataagattttacattgaggcc 14154455  T
Q  174 tttatgccaaggttg 188  Q
    ||| |||||||||||    
T  14154456 tttgtgccaaggttg 14154470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 74 - 214
Target Start/End: Original strand, 41174270 - 41174410
Alignment:
Q  74 gatgagaattttg-ttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||| ||||| ||||| | |    
T  41174270 gatgagaattttggttgttgctttttgttccttacgtattattttatgaa-ttttatgaacatgttattagaataattttatgagattttgcattgcggc 41174368  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgct 214  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  41174369 ctttgtgccaaggttgttttaaacgttgaaataatttccgct 41174410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 17325695 - 17325834
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||| |||||||||||||||||    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| ||    
T  17325695 gatgggaattttgttgttgctta---ttccttacgtattattttatgaacttttataaacatgttgttggaataattttatgagattttacattgaggcc 17325791  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    | | ||| ||||||||||||||||||||||| |||||||||||    
T  17325792 tatgtgcgaaggttgttttaaacgttgaaataatttccgctgc 17325834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 18368246 - 18368335
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18368246 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgagatttta 18368335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 14872014 - 14872126
Alignment:
Q  104 ttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgccaaggttgttttaaacgttgaaa 203  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||    
T  14872014 ttacgtattactttatgaagttttatgaacatgttgttggaataactttatgagattttacattgaggcctttgtgccaaggttattttaaacgttgaaa 14872113  T
Q  204 tgatttccgctgc 216  Q
    | |||||||||||    
T  14872114 taatttccgctgc 14872126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 50349737 - 50349885
Alignment:
Q  74 gatgagaatttt-gttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||||| |||| || ||||||  ||||| |    
T  50349737 gatgagaatttttgttgttgctttctattcattacgtattattttatgaactttcatgaacatgttgttggaataactttaagagattttatgttgaggc 50349836  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    |||  || |||||||||||||||||||||||| ||||||||||||||||    
T  50349837 cttggtgtcaaggttgttttaaacgttgaaataatttccgctgcgaagt 50349885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 6157784 - 6157638
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||| |||||| ||| ||||||||||||||||||||  ||| ||||||||||||||||||| |||||| || ||||||||||| ||||||||||||| ||    
T  6157784 gatgggaatttggttattgctttctgttccttacgttatatcttatgaagttttatgaacaagttgtttgattaattttatgagattttacattgaggcc 6157685  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
     || |||||||||||||||||| |||||||| ||||||||||||||||    
T  6157684 -ttgtgccaaggttgttttaaatgttgaaataatttccgctgcgaagt 6157638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 6807135 - 6807279
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||||||| |||| ||||||||||  | | |   ||||||| ||||||||||||| ||    
T  6807135 gatgagaatttggttgttgctttctgttccttatgtattactttatgaagctttaagaacatgttg--gaattccgtttatgagattttacattgaggcc 6807232  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| ||||||||||| ||||||||||||||| ||||||||||||||||    
T  6807233 tttgtgccaaggttg-tttaaacgttgaaataatttccgctgcgaagt 6807279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 43890974 - 43891112
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||| ||||| || || |||    
T  43890974 attttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagattttacgttgaggcccttgtgc 43891073  T
Q  181 caaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||| |||||| |||| ||| ||||||||||||||||    
T  43891074 caaagttg-tttaaaagttg-aataatttccgctgcgaagt 43891112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 37037187 - 37037098
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| || ||||||    
T  37037187 gatgagaattttgttgttgctttctattccttacgtattattttatgaactttcatgaacatgttgttggaataactttaagagatttta 37037098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 218
Target Start/End: Original strand, 52213920 - 52214069
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacat 166  Q
    |||||| ||||||||||| ||| |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||| ||| ||| |    
T  52213920 gtaacaggatgagaattt-gttattgctttctgttccttacgtatta-tttatgaag-tttaagaacatgttgttggaacaattttatgagattctacgt 52214016  T
Q  167 tga-gacctttatgccaaggttgttttaaacgttgaaatgatttccgctgcga 218  Q
    ||| | ||||| |||||| ||||||||||| ||| |||| |||||| ||||||    
T  52214017 tgatggcctttgtgccaaagttgttttaaatgttaaaataatttccactgcga 52214069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 46751552 - 46751463
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| ||| ||||||||| ||||||||||| |||| || ||||||    
T  46751552 gatgagaattttgttgttgctttctattccttacatattattttatgaactttcatgaacatgctgttggaataactttaagagatttta 46751463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 161
Target Start/End: Complemental strand, 43924673 - 43924587
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattt 161  Q
    ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| |||||||||| ||||    
T  43924673 gatgagaattt-gttattgctttctgttccttacgtattgttttatgaagttttaaggacatgttgttggaacaattttatgagattt 43924587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 18701740 - 18701822
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||    
T  18701740 attttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagatttta 18701822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 3395542 - 3395667
Alignment:
Q  91 tgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgccaaggttgtt 190  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||| ||||||  ||||| ||| | |||||| |||  |    
T  3395542 tgctttatgttccttacgtattgttttatgaagttttaagaacatgatgttggaacaattttatgagattttatgttgaggcctgtgtgccaaagtt-at 3395640  T
Q  191 ttaaacgttgaaatgatttccgctgcga 218  Q
    ||||| |||| ||| |||||||||||||    
T  3395641 ttaaaagttg-aataatttccgctgcga 3395667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 164
Target Start/End: Complemental strand, 15555164 - 15555083
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttac 164  Q
    |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||  | ||||||| |||||||    
T  15555164 tttgttattgctttctgttccttacgtattattttatgaattttcatgaacatgatgttggaaagaatttatgagattttac 15555083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 11910115 - 11910043
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttg 139  Q
    |||||| ||||  ||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||    
T  11910115 gtaacaggatggaaattttgttgttgctttctattccttacgtattattttatgaactttcatgaacatgttg 11910043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 5214025 - 5213969
Alignment:
Q  160 tttacattgagacctttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    |||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  5214025 tttacattaagacctttgtgccaaggttgttttaaacgttgaaataatttccgctgc 5213969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 14817664 - 14817529
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgcca 182  Q
    |||||| || ||||||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||| | ||||  ||||| |||   |||||    
T  14817664 tttgttattactttctgttccttacgtatta-tttatgaag-tttaagaacatgttgttggaacaattttatgagaatttatgttgaggcctgggtgcca 14817567  T
Q  183 aggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    | | || ||||||  ||||||| ||||||||||| ||||    
T  14817566 aagatg-tttaaatattgaaataatttccgctgcaaagt 14817529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 13523997 - 13524088
Alignment:
Q  74 gatgagaattttgttgttgcttt-ctgttccttacgtatt-attttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||||||| |||||| ||||||| ||||||||||| |||| |||||||||| ||| ||||||||||||||||||  | ||||||| ||||||    
T  13523997 gatgagaactttgttattgcttttctgttccttacatatttattttatgaattttcatgaacatgttgttggaaagaatttatgagatttta 13524088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 37427191 - 37427127
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgtt 138  Q
    |||| ||| |||||||||  |||||||||||||||||||| |||||||||||| |||||| ||||    
T  37427191 gatgtgaactttgttgttattttctgttccttacgtattactttatgaagtttcatgaacttgtt 37427127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 14643329 - 14643375
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatg 120  Q
    ||||||||||||||||||| ||||| ||||||||||||  |||||||    
T  14643329 gatgagaattttgttgttgatttctattccttacgtatacttttatg 14643375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 126
Target Start/End: Complemental strand, 6818519 - 6818466
Alignment:
Q  74 gatgagaattttgttgttgcttt-ctgttccttacgtattattttatgaagttt 126  Q
    ||||||||||||||  ||||||| || |||||||||||||| ||||||||||||    
T  6818519 gatgagaattttgtcattgcttttctattccttacgtattactttatgaagttt 6818466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 17261024 - 17260955
Alignment:
Q  114 ttttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgccaa 183  Q
    ||||||||| | | ||||||||||||||||||||| |||| || ||||||  ||||| || |||||||||    
T  17261024 ttttatgaattatcatgaacatgttgttggaataactttaagagattttatgttgaggcccttatgccaa 17260955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 1911 - 1772
Alignment:
Q  82 ttttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgcc 181  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||    
T  1911 ttttgttgttgctttctgttccttatgtattattctatgaagttttatgaacatgttgttggaataattttatgagattttacattgaggcctttgtgcc 1812  T
Q  182 aaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  1811 aaggttgttttaaatgttgaaataatttccgctgcgaagt 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 4e-56; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 24514526 - 24514384
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||    
T  24514526 gatgtgaattttgttgttgctttctgttccttacgtattatttcatgaagttttatgaacatgttgttagaataattttatgagattttacattgaggcc 24514427  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||| |||||||||||||||||||||| |||| |||||||||||    
T  24514426 tttgtgccaaggttgttttaaacgttaaaataatttccgctgc 24514384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 28654324 - 28654462
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||    
T  28654324 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacattttgttggaataattttatgagattttaccttgaggcc 28654423  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccg 212  Q
    ||| |||||||||| |||||||||||||||| |||||||    
T  28654424 tttgtgccaaggttattttaaacgttgaaataatttccg 28654462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 23759893 - 23759750
Alignment:
Q  74 gatgagaattttg-ttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||| ||||||||||||| |    
T  23759893 gatgagaattttggttgttgctttctgttccttacgtatttttttatgaagttttatgaacatgttatttgaataattttatgagattttacattgaggc 23759794  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||    
T  23759793 ctttgtgccaaggttgttttaaacgttgaaataatttctgctgc 23759750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 74 - 216
Target Start/End: Complemental strand, 36838465 - 36838322
Alignment:
Q  74 gatgagaattttg-ttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| |    
T  36838465 gatgagaattttggttgttgctttctgttccttacgtattatcttatgaagttttatgaacatgtcattggaataattttatgagattttacattgaggc 36838366  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    |||| |||||||||| |||||||||||||||| |||||||||||    
T  36838365 ctttgtgccaaggtttttttaaacgttgaaataatttccgctgc 36838322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 17305755 - 17305625
Alignment:
Q  86 gttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgccaagg 185  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| || |||||    
T  17305755 gttgttgctttctgttccttacatattattttatgaagttttatgaacatgttattggaataattttatgagattttacattgaggcctttgtgtcaagg 17305656  T
Q  186 ttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||||||||||||||||||| |||||||||||    
T  17305655 ttgttttaaacgttgaaataatttccgctgc 17305625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 31517872 - 31517734
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgcca 182  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||| |||| ||||| ||||||| ||||| | |||    
T  31517872 tttgttattgctttctgttccttgcgtattgttttatgaagttttatgaacatgttgttgaaataatttaatgagatttttcattgaggcctttgtccca 31517773  T
Q  183 aggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
     |||| |||||||||||||||| ||||||||||||||||    
T  31517772 gggttattttaaacgttgaaataatttccgctgcgaagt 31517734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 67 - 216
Target Start/End: Original strand, 22253362 - 22253501
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacat 166  Q
    |||||| |||| |||||||||||||||||||| ||||||||| ||||||||          ||||||||||||||||||||||||||||| |||||||||    
T  22253362 gtaacaagatgggaattttgttgttgctttctattccttacgaattatttt----------atgaacatgttgttggaataattttatgagattttacat 22253451  T
Q  167 tgagacctttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    | |||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  22253452 ttagacatttgtgccaaggttgttttaaacgttgaaataatttccgctgc 22253501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 24835467 - 24835583
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| || ||||||  ||||| ||    
T  24835467 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataa-cttaagagattttatgttgaggcc 24835565  T
Q  174 tttatgccaaggttgttt 191  Q
    || ||||||| |||||||    
T  24835566 ttgatgccaaagttgttt 24835583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 357337 - 357199
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||  |||||||| || |||    
T  357337 attttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttgagacccttgtgc 357238  T
Q  181 caaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||| |||||| |||| ||| ||||||||||||||||    
T  357237 caaagttg-tttaaaagttg-aataatttccgctgcgaagt 357199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 24816126 - 24816200
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataa 148  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  24816126 gatgggaattttgttgttgctttctgttccttacatattattttatgaagttttatgagcatgttgttggaataa 24816200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 22689171 - 22689089
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | ||||||||||||||||||| | |||| || ||||||    
T  22689171 attttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaatgactttaagagatttta 22689089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 34136397 - 34136336
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttg 142  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||| ||||| | |||||||    
T  34136397 attttgttgttgctttctattccttacgtattaccttatgaagtttcatgaataagttgttg 34136336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 117
Target Start/End: Complemental strand, 24672694 - 24672651
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattatttt 117  Q
    |||| |||||||||||||||||||| ||||||||||||||||||    
T  24672694 gatgggaattttgttgttgctttctattccttacgtattatttt 24672651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 15476021 - 15475965
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatga 131  Q
    |||||||| |||||| ||||||||| |||||||||||||||||| ||||| |||||||    
T  15476021 gatgagaactttgttattgctttctattccttacgtattatttt-tgaagatttatga 15475965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 32216011 - 32216063
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttt 126  Q
    ||||| ||||||||||||||||||| |||||||||||||  || |||||||||    
T  32216011 gatgataattttgttgttgctttctattccttacgtattgcttaatgaagttt 32216063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 75 - 221
Target Start/End: Complemental strand, 27466 - 27319
Alignment:
Q  75 atgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacct 174  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||| | |    
T  27466 atgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttattggaataattttataagattttacattgaggctt 27367  T
Q  175 ttatgccaaggttgtttt-aaacgttgaaatgatttccgctgcgaagt 221  Q
    || ||||||||||||||| ||| |||||||| ||||||||||||||||    
T  27366 ttgtgccaaggttgttttaaaatgttgaaataatttccgctgcgaagt 27319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 218
Target Start/End: Complemental strand, 147903 - 147761
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattga-gac 172  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||| ||| ||  |||| | |    
T  147903 gatgagaattt-gttattgctttctgttccttacgtatta-tttatgaag-tttaagaacatgttgttggaacaattttatgagattctaagttgatggc 147807  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgctgcga 218  Q
     | | |||||| ||||||||||| |||||||| |||||||||||||    
T  147806 atgtgtgccaaagttgttttaaatgttgaaataatttccgctgcga 147761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 141811 - 141673
Alignment:
Q  79 gaattttgttgttgctttctgttccttacgtattatttt-atgaagttttatgaacatgttgttggaataattttatgatattttacattgagaccttta 177  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||     
T  141811 gaattttgttgttgctttctattccttacgtattatttttatgaacttttatgaacatgttgttggaataattttatgagattttacattgaggcctttg 141712  T
Q  178 tgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  141711 tgccaaggttgttttaaacgttgaaataatttccgctgc 141673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 106; Significance: 4e-53; HSPs: 3)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 74 - 214
Target Start/End: Original strand, 9720 - 9861
Alignment:
Q  74 gatgagaattttg-ttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagac 172  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||| |    
T  9720 gatgagaattttggttgttgctttctgttccttacgtattattttatgaagttttatgaacatgtcgttggaataattttattagattttacattgaggc 9819  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgct 214  Q
    |||| || |||||||||||||||||||||||| |||||||||    
T  9820 ctttgtgtcaaggttgttttaaacgttgaaataatttccgct 9861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 74 - 202
Target Start/End: Complemental strand, 10175 - 10047
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  10175 gatgagaattttgttgttgctttctgttccttacgtattattttataaagttttatgaacatgttgttggaataattttatgagattttacattgaggcc 10076  T
Q  174 tttatgccaaggttgttttaaacgttgaa 202  Q
    |||  ||||||||||||||||| ||||||    
T  10075 tttgagccaaggttgttttaaatgttgaa 10047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 9999 - 10043
Alignment:
Q  102 ccttacgtattattttatgaagttttatgaacatgttgttggaat 146  Q
    |||||||||||||| ||| || ||| |||||||||||||||||||    
T  9999 ccttacgtattattctatcaactttcatgaacatgttgttggaat 10043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 105; Significance: 1e-52; HSPs: 4)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 74 - 218
Target Start/End: Complemental strand, 6549 - 6405
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| | ||||||||||| ||    
T  6549 gatgaaaattttgttgttgctttctattccttacgttttattttatgaactttgatgaacatgttgttggaataattttatgagaatttacattgaggcc 6450  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcga 218  Q
    ||| ||||||||||||||||||||||||||| |||||||||||||    
T  6449 tttgtgccaaggttgttttaaacgttgaaataatttccgctgcga 6405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 80 - 218
Target Start/End: Complemental strand, 4611 - 4473
Alignment:
Q  80 aattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatg 179  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| | ||||||||||| ||||| ||    
T  4611 aattttgttgttgctttctattccttacgtattattttatgaactttcatgaacatgttgttggaataattttatgagaatttacattgaggcctttgtg 4512  T
Q  180 ccaaggttgttttaaacgttgaaatgatttccgctgcga 218  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  4511 ccaaggttgttttaaacgttgaaataattttcgctgcga 4473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 74 - 210
Target Start/End: Complemental strand, 13668 - 13532
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| | ||||||||||| ||    
T  13668 gatgaaaattttgttgttgctttctattccttacgttttattttatgaactttgatgaacatgttgttggaataattttatgagaatttacattgaggcc 13569  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttc 210  Q
    ||| ||||||||||||||||||||||||||| |||||    
T  13568 tttgtgccaaggttgttttaaacgttgaaataatttc 13532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 20676 - 20765
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| ||| |||||||||||||||| |||| |||| || ||||||    
T  20676 gatgagaattttgttgttgcttcctattccttacgtattattttatgaactttcatgaacatgttgttgggataactttaagagatttta 20765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 104 - 221
Target Start/End: Original strand, 19484 - 19601
Alignment:
Q  104 ttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgccaaggttgttttaaacgttgaaa 203  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  19484 ttacgtattattctatgaagttttatgaacatgttgttggaataattttatgagattttacattgaggcctttgtgccaaggttgttttaaacgttgaaa 19583  T
Q  204 tgatttccgctgcgaagt 221  Q
    ||||||||||||||||||    
T  19584 tgatttccgctgcgaagt 19601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 11089 - 11229
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||| || ||    
T  11089 gatgagaattttgttgt-gctttctgttccttacgtattattctatgaagttttatgaacaagttgttggaataattttatgagattttacatt-aggcc 11186  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||| |||||| |||||||||||||||||||| |||||||||||    
T  11187 tttgtgccaaagttgttttaaacgttgaaataatttccgctgc 11229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 23141 - 22993
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataat-tttatgatattttacattgagac 172  Q
    |||| |||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||    ||||||| ||||||||||||| |    
T  23141 gatgggaattttgttgttgctttctattccttacgtattactttatgaagctttatgaacatgttgttggaattccgtttatgagattttacattgaggc 23042  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  23041 ctttctgccaaggttgttttaaacgttgaaataatttccgctgcgaagt 22993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 67 - 221
Target Start/End: Complemental strand, 20142 - 19987
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataat-tttatgatattttaca 165  Q
    |||||| |||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||  | || |||| ||||||||    
T  20142 gtaacaggatgggaaatttgttgttgctttctgttccttacatattactttatgaagctttatgaacatgttgttggaattctgttgatgagattttaca 20043  T
Q  166 ttgagacctttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||||| | ||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  20042 ttgaggcttttgtgccaaggttgttttaaacgttgaaataatttccgctacgaagt 19987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 75 - 216
Target Start/End: Original strand, 11645 - 11786
Alignment:
Q  75 atgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacct 174  Q
    |||||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||    
T  11645 atgagaattttgttcttgcttcctgttccttacgtatttttttatgaagttttatgaacatgttgttggaataattttatgagattttaccttgaggcct 11744  T
Q  175 ttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    || || ||||||||||||||| ||| |||| ||||| |||||    
T  11745 ttgtgtcaaggttgttttaaatgttaaaataatttctgctgc 11786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 67 - 210
Target Start/End: Complemental strand, 38512 - 38369
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacat 166  Q
    |||||| |||||||||||||||||| |||| | ||||||||||||||||||||||| ||| |||||||||||||||||||||  |||||| |||||||||    
T  38512 gtaacaggatgagaattttgttgttactttatattccttacgtattattttatgaactttcatgaacatgttgttggaataaccttatgagattttacat 38413  T
Q  167 tgagacctttatgccaaggttgttttaaacgttgaaatgatttc 210  Q
    |||  ||||| ||||||||||||||||||||||||||| |||||    
T  38412 tgaagcctttgtgccaaggttgttttaaacgttgaaataatttc 38369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 74 - 216
Target Start/End: Original strand, 12113 - 12252
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||| ||||| ||||||| ||||| ||    
T  12113 gatgagaatttagtttttgctttctgttccttacgtattattttatgaagttttatgaaca---tgttggaataattatatgagattttaccttgaggcc 12209  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    ||| || |||||||||||||||||||||||| ||||| |||||    
T  12210 tttgtgtcaaggttgttttaaacgttgaaataatttctgctgc 12252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1098 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 67 - 221
Target Start/End: Complemental strand, 436 - 281
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataat-tttatgatattttaca 165  Q
    |||||| |||| ||| ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||  | || |||| ||||||||    
T  436 gtaacaggatgggaaatttgttgttgctttctgttccttacatattactttatgaagctttatgaacatgttgttggaattctgttgatgagattttaca 337  T
Q  166 ttgagacctttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||||| | ||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  336 ttgaggcttttgtgccaaggttgttttaaacgttgaaataatttccgctacgaagt 281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 74 - 221
Target Start/End: Complemental strand, 4719 - 4571
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||  ||| |  ||||| ||    
T  4719 gatgggaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataactttaagaggtttcatgttgaggcc 4620  T
Q  174 tttatgccaaggttg-ttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    || ||||||| | || ||||||| |||||||| ||||||||||||||||    
T  4619 ttgatgccaaagctgtttttaaatgttgaaataatttccgctgcgaagt 4571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 105065 - 105184
Alignment:
Q  98 tgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgccaaggttgttttaa-ac 196  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||||||||| |     
T  105065 tgttacttacgtattattttatgaagttttatgaacatgttgttggaataattttataacattttacattgaggcctttgtgccaaggttgttttaagaa 105164  T
Q  197 gttgaaatgatttccgctgc 216  Q
    |||||||| ||||| |||||    
T  105165 gttgaaataatttcagctgc 105184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 21679 - 21598
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttt 162  Q
    |||||||||| ||||||| ||||||||||||||||| ||  | ||| |||||||||||||||||  |||||||||| |||||    
T  21679 attttgttgtagctttctattccttacgtattatttgatacattttcatgaacatgttgttggatgaattttatgagatttt 21598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 10560 - 10479
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttt 162  Q
    |||||||||| |||| || ||||||||||||||||| ||  | ||| |||||||||||||||||   ||||||||| |||||    
T  10560 attttgttgtagcttgctattccttacgtattatttgatacattttcatgaacatgttgttggatgtattttatgagatttt 10479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 221
Target Start/End: Original strand, 36510487 - 36510629
Alignment:
Q  79 gaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttat 178  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||| | ||||||||||||||||||| |||| || ||||||  ||||| ||||  |    
T  36510487 gaattttgttgttgttttctattccttacgtattattttatgaactttcaagaacatgttgttggaataactttaagagattttatgttgaggccttggt 36510586  T
Q  179 gccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||||||||| ||||||||||| ||||||||||||||||    
T  36510587 gccgaggttgttttcaacgttgaaataatttccgctgcgaagt 36510629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 218
Target Start/End: Original strand, 23203512 - 23203665
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaat-aattttatgatatttta-c 164  Q
    |||||| |||| | |||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||| |||||||| ||||||| || ||||||      
T  23203512 gtaacaggatggggattttgttgttgctttttgttccttgcgtattattttatgaagttttatgaacttgtagttggaataaattttaagagattttatg 23203611  T
Q  165 attgagacctttatgccaaggttgttttaaacgttgaaatgatttccgctgcga 218  Q
    |||||| ||||  |||||||||||||||||||||| |||| ||||||| |||||    
T  23203612 attgaggccttggtgccaaggttgttttaaacgttaaaataatttccgatgcga 23203665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 21407307 - 21407396
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||| || ||||||    
T  21407307 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttataaacatgttgttggaatgactttaagagatttta 21407396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 67 - 218
Target Start/End: Original strand, 26781636 - 26781786
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaat-aattttatgatattttaca 165  Q
    |||||| |||| |||||| ||||||||||||| ||| |||||||||||| || ||| ||| ||||||||||||||||||| |||||||||| |||||||     
T  26781636 gtaacaggatgggaatttagttgttgctttctattcattacgtattattctaggaactttcatgaacatgttgttggaataaattttatgagattttacg 26781735  T
Q  166 ttgagacctttatgccaaggttgttttaaacgttgaaatgatttccgctgcga 218  Q
    ||||||||||| |||||| |||| |||||| |||||||  |||||||||||||    
T  26781736 ttgagacctttgtgccaaagttg-tttaaatgttgaaa-aatttccgctgcga 26781786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 12123291 - 12123436
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| || ||||||  ||||| ||    
T  12123291 gatgagaattttgttgttgctttctattccttacgtattattttatgaactttcatgaacatgttgttggaataactttaagagattttatgttgaggcc 12123390  T
Q  174 tttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||  |||||| | || |||||| |||| ||| | ||||||||||||||    
T  12123391 ttggtgccaaagatg-tttaaatgttg-aataaattccgctgcgaagt 12123436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 21558690 - 21558792
Alignment:
Q  61 ttatatgtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatt 160  Q
    ||||| |||||  |||| |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| || |||    
T  21558690 ttatacgtaacgggatgtgaattttgttgttgctttctattccttacgtattattttatgaactttcatgaacatgttgttggaataactttaagagatt 21558789  T
Q  161 tta 163  Q
    |||    
T  21558790 tta 21558792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 21556041 - 21556130
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| || ||||||    
T  21556041 gatgtgaattttgttgttgctttctattccttacgtattattttatgaactttcatgaacatgttgttggaataactttaagagatttta 21556130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 33896844 - 33896982
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | ||||||||||||| |||| ||||||| || ||||||  |||||  | || |||    
T  33896844 attttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgtcggaagaattttaagagattttatgttgaggtccttgtgc 33896943  T
Q  181 caaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||| |||||| |||| ||| ||||||||||||||||    
T  33896944 caaagttg-tttaaaagttg-aataatttccgctgcgaagt 33896982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 216
Target Start/End: Original strand, 11898814 - 11898893
Alignment:
Q  137 ttgttggaataattttatgatattttacattgagacctttatgccaaggttgttttaaacgttgaaatgatttccgctgc 216  Q
    |||||| ||||||||||||| ||||||| |||||   ||| || ||| ||| |||||||||||||||| |||||||||||    
T  11898814 ttgttgaaataattttatgagattttaccttgaggtttttgtgtcaaagttattttaaacgttgaaataatttccgctgc 11898893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 20912795 - 20912853
Alignment:
Q  74 gatgagaattttgttgttg-ctttctgttccttacgtattattttatgaagttttatga 131  Q
    |||||||||||| |||||| |||||| ||||||||||||| ||||| |||| |||||||    
T  20912795 gatgagaattttattgttgtctttctattccttacgtattgttttaagaagatttatga 20912853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Original strand, 22109102 - 22109160
Alignment:
Q  74 gatgagaattttgttgttg-ctttctgttccttacgtattattttatgaagttttatga 131  Q
    |||||||||||| |||||| |||||| ||||||||||||| ||||| |||| |||||||    
T  22109102 gatgagaattttattgttgtctttctattccttacgtattgttttaagaagatttatga 22109160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 21732605 - 21732653
Alignment:
Q  94 tttctgttccttacgtattattttatgaagttttatgaacatgttgttg 142  Q
    ||||| |||||||||||||| |||||||| ||||||||| | |||||||    
T  21732605 tttctattccttacgtattactttatgaatttttatgaataagttgttg 21732653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 21810256 - 21810304
Alignment:
Q  94 tttctgttccttacgtattattttatgaagttttatgaacatgttgttg 142  Q
    ||||| |||||||||||||| |||||||| ||||||||| | |||||||    
T  21810256 tttctattccttacgtattactttatgaatttttatgaataagttgttg 21810304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 175378 - 175503
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaat-aattttatgatattttaca 165  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||| |||||||||| |||||||     
T  175378 gtaacaggatgagaattttgttgttgctttctattccttacgtattattctatgaactttcatgaacatgttgttggaataaattttatgagattttacg 175477  T
Q  166 ttgagacctttatgccaaggttgttt 191  Q
    ||||| ||| | |||||| |||||||    
T  175478 ttgaggcctgtgtgccaaagttgttt 175503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 183617 - 183507
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | || ||||||||||||||| ||||||| || ||||||  ||||| || || |||    
T  183617 attttgttgttgctttctattccttacgtattattttatgaattatcatcaacatgttgttggaagaattttaagagattttatgttgaggcccttgtgc 183518  T
Q  181 caaggttgttt 191  Q
    ||| |||||||    
T  183517 caaagttgttt 183507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 9060 - 8922
Alignment:
Q  82 ttttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgcc 181  Q
    ||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||  ||||  || |||||||    
T  9060 ttttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttgaagcccttatgcc 8961  T
Q  182 aaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    || ||||||||||| |||| ||| |||||||| |||||||    
T  8960 aaagttgttttaaaagttg-aataatttccgcagcgaagt 8922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 221
Target Start/End: Original strand, 4247 - 4385
Alignment:
Q  82 ttttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgcc 181  Q
    ||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||  ||||  || |||||||    
T  4247 ttttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttgaagcccttatgcc 4346  T
Q  182 aaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    || ||||||||||| |||| ||| |||||||| |||||||    
T  4347 aaagttgttttaaaagttg-aataatttccgcagcgaagt 4385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 183
Target Start/End: Original strand, 199051 - 199160
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacc 173  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| | | ||||||||||||||||||||| |||| || ||||||  ||||| ||    
T  199051 gatgagaattttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaataactttaagagattttatgttgaggcc 199150  T
Q  174 tttatgccaa 183  Q
     |||||||||    
T  199151 cttatgccaa 199160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 163
Target Start/End: Original strand, 209011 - 209089
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||||| |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||| ||||||    
T  209011 tttgttattgctttctgttccttacgtatta-tttatgaag-tttaagaacatgttgttggaacaattttatgagatttta 209089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 12797 - 12659
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||  ||||| || || |||    
T  12797 attttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttgaggcccttgtgc 12698  T
Q  181 caaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||| |||||| |||| ||| ||||||||||||||||    
T  12697 caaagttg-tttaaaagttg-aataatttccgctgcgaagt 12659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 148
Target Start/End: Original strand, 8100 - 8174
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataa 148  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  8100 gatgggaattttgttgttgctttctgttccttacatattattttatgaagttttatgagcatgttgttggaataa 8174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 13765 - 13854
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||| ||| |||||||||||||| ||||||||||| || ||||||    
T  13765 gatgagaattttgttgttgctttctatttcttacgtattattttatgaactttcatgaacatgttgttagaataattttaagagatttta 13854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2045 - 1978
Alignment:
Q  1 ttaatttgtttcacgtttgattctatgaatcaagtttttgcaacaacaattaattgatagttatatgt 68  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  2045 ttaatttgtttcacgtttgattctatgaatcaagtttttacaacaacaattaattgacagttatatgt 1978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 15066 - 14992
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataa 148  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  15066 gatgggaattttgttgttgctttctattccttacgtattattttatgaactttcatgaacatgttgttggaataa 14992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 2809 - 2737
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttg 139  Q
    |||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||    
T  2809 gtaacaggatgggaattttgttgttgctttctattccttacgtattattttatgaactttcatgaacatgttg 2737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1849 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold1849
Description:

Target: scaffold1849; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 1216 - 1132
Alignment:
Q  79 gaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||||||||||||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||| |||| || ||||||    
T  1216 gaattttgttgttgctttctattccttatgtattattttatgaactttcatgaacatgttgttggaataactttaagagatttta 1132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 22232 - 22094
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||| ||| | ||||| || ||||||  ||||| || || |||    
T  22232 attttgttgttgctttctattccttacgtattattttatgaattatcatgaacatgttgttagaagagttttaagagattttatgttgaggcccttgtgc 22133  T
Q  181 caaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||| |||||| ||| |||| ||||||||||||||||    
T  22132 caaagttg-tttaaaagtt-aaataatttccgctgcgaagt 22094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 190
Target Start/End: Original strand, 29835 - 29942
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgcca 182  Q
    |||||| |||||||||||| ||||| |||||||||||||||||||| | ||||||| |||||| |||||||||| ||||||| ||||| ||| | |||||    
T  29835 tttgttattgctttctgtttcttacatattattttatgaagttttaaggacatgttattggaacaattttatgagattttacgttgaggcctgtgtgcca 29934  T
Q  183 aggttgtt 190  Q
    | ||||||    
T  29935 aagttgtt 29942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 221
Target Start/End: Complemental strand, 7712 - 7572
Alignment:
Q  79 gaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttat 178  Q
    |||||||||||||||||||| ||| ||||||||||||||||||| | | ||||| |||||||||||| ||||||| || ||||||  |||||||| || |    
T  7712 gaattttgttgttgctttctattcgttacgtattattttatgaattatcatgaatatgttgttggaagaattttaagagattttatgttgagacccttgt 7613  T
Q  179 gccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    || || |||| |||||| |||| ||| ||||||| ||||||||    
T  7612 gctaaagttg-tttaaaagttg-aataatttccgttgcgaagt 7572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 3199 - 3336
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgcca 182  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||| | |||||||||  ||| |||||||||| ||||||  ||||| ||||  |||||    
T  3199 tttgttattgctttctgttccttacgtattgttttatgaagttttaaggacatgttgtcagaacaattttatgagattttatgttgaggccttggtgcca 3298  T
Q  183 aggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    | | || ||||||  ||||||| ||||||| ||||||||    
T  3299 aagatg-tttaaatattgaaataatttccgatgcgaagt 3336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 19715 - 19797
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    ||||||||||||||||||||||||||||||||| || ||||| ||| |||||||||||||||||  |||||||||| ||||||    
T  19715 attttgttgttgctttctgttccttacgtattacttgatgaattttcatgaacatgttgttggatgaattttatgagatttta 19797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 221
Target Start/End: Complemental strand, 28908 - 28758
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacat 166  Q
    |||||| ||||||| ||||||||||||||||| ||| ||||||||||||||||||| | |||||||||||||||||||| || |||| || ||||||  |    
T  28908 gtaacaggatgaga-ttttgttgttgctttctattcgttacgtattattttatgaattattatgaacatgttgttggaagaa-tttaagagattttatgt 28811  T
Q  167 tgagacctttatgccaaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    |||| || || |||||| |||| |||||| |||| ||| ||||||||| ||||||    
T  28810 tgaggcccttgtgccaaagttg-tttaaaagttg-aataatttccgctacgaagt 28758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 13309 - 13242
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaaca 134  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||||| |||||| ||| |||||||    
T  13309 gtaacaggatgagaattttgctgttgctttctgttctttacgtattattctatgaactttcatgaaca 13242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 19632 - 19494
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| || |||||||||||||||||||| | | |||||||||||||||||| ||||||| || ||||||  ||||| || || |||    
T  19632 attttgttgttgctttctatttcttacgtattattttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttgaggcccttgtgc 19533  T
Q  181 caaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    |||  ||| |||||| ||||  || ||||||||||||||||    
T  19532 caaaattg-tttaaaagttg-gataatttccgctgcgaagt 19494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 7645 - 7570
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttg 142  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||| | |||||||    
T  7645 gtaacaggatgagaattttgttgttgctttatgttccttacgtattactttatgaagtttcatgaataagttgttg 7570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 7732 - 7595
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgcca 182  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||||| | |||||||||| ||| |||||||||| ||||||  ||||| ||||  | |||    
T  7732 tttgttattgctttctattccttacgtattgttttatgaagttttaaggacatgttgttagaacaattttatgagattttatgttgaggccttggttcca 7633  T
Q  183 aggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    | | || ||||||  ||||||| ||||||||| ||||||    
T  7632 aagatg-tttaaatattgaaataatttccgctacgaagt 7595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 74 - 218
Target Start/End: Complemental strand, 50141 - 49998
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaat-aattttatgatattttacattgagac 172  Q
    ||||| |||||||||||||| |||| |||||| ||||||||| |||||  ||| ||||||||||| ||||||| |||||||||| ||||||| ||||| |    
T  50141 gatgaaaattttgttgttgccttctattccttccgtattattctatgagctttcatgaacatgttattggaataaattttatgagattttacgttgaggc 50042  T
Q  173 ctttatgccaaggttgttttaaacgttgaaatgatttccgctgcga 218  Q
    || | |||||| |||  |||||| |||| ||| |||||||||||||    
T  50041 ctgtgtgccaaagtt-atttaaatgttg-aataatttccgctgcga 49998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 27234 - 27329
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||||| ||||||| ||||||||||  ||||| ||||||||||||||  ||||||| ||| ||||| | ||||||| | | ||||||||| ||||||    
T  27234 gtaacaggatgaga-ttttgttgttattttctattccttacgtattaccttatgaattttcatgaataagttgttgaattgattttatgagatttta 27329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1716 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1716
Description:

Target: scaffold1716; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 221
Target Start/End: Original strand, 210 - 348
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgc 180  Q
    |||||||||||||||||| ||||||| |||||| ||||| || | | |||||||||||||||||| ||||||| || ||||||  ||||| || || |||    
T  210 attttgttgttgctttctattccttaagtattaatttataaattatcatgaacatgttgttggaagaattttaagagattttatgttgaggcccttgtgc 309  T
Q  181 caaggttgttttaaacgttgaaatgatttccgctgcgaagt 221  Q
    ||| |||| |||||| |||| ||| ||||| ||||||||||    
T  310 caaagttg-tttaaaagttg-aataatttctgctgcgaagt 348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 6996 - 6917
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgta-ttattttatgaagttttatgaacatgttg-ttggaataattt 151  Q
    |||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||  |||||| ||||||||||||    
T  6996 gatgggaattttgttgttgctttctgttccttacgtatttatcttatgaagttttatgattatgttgtttggaataattt 6917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 9896 - 9982
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||| |||||||||| |||| || ||||||||||||||||||||||||||||||||| |||   ||||| ||||||||||||| ||||||    
T  9896 gatgggaattttgttattgcattatgttccttacgtattattttatgaagttttatgcaca---tgttgaaataattttatgagatttta 9982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 6205 - 6121
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattga 169  Q
    |||||| ||||||||| ||||||||||||||||| ||||||||| | |||||||||||||||| |||||||||| ||| ||||||||    
T  6205 tttgttattgctttcttttccttacgtattattt-atgaagtttaa-gaacatgttgttggaacaattttatgaaattctacattga 6121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 221
Target Start/End: Complemental strand, 9374 - 9270
Alignment:
Q  115 tttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgccaaggttgttttaaacgttgaaatgatttccgct 214  Q
    |||||||| | | |||||||||||||||||| ||||||| || ||||||  ||||| || || |||||| |||| |||||| |||| ||| ||||||| |    
T  9374 tttatgaattatcatgaacatgttgttggaagaattttaagagattttatgttgaggcccttgtgccaaagttg-tttaaaagttg-aataatttccgtt 9277  T
Q  215 gcgaagt 221  Q
    |||||||    
T  9276 gcgaagt 9270  T

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Target: scaffold0032 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 66102 - 66184
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    ||||| ||||||||||||||||||||||||||  || ||||| ||| |||||||||||||||||  |||||||||| ||||||    
T  66102 attttattgttgctttctgttccttacgtattgcttgatgaattttcatgaacatgttgttggatgaattttatgagatttta 66184  T

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Target: scaffold0716 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 522 - 448
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataa 148  Q
    |||| ||||||||||||||||||||  || ||||||||||||||||||| ||| |||||| || |||||||||||    
T  522 gatgtgaattttgttgttgctttctaatcgttacgtattattttatgaactttcatgaacttgatgttggaataa 448  T

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Target: scaffold0716; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 111
Target Start/End: Complemental strand, 3878 - 3841
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtat 111  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  3878 gatgagaattttgttgttgctttctattccttacgtat 3841  T

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Target: scaffold0073 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 56352 - 56278
Alignment:
Q  79 gaattttgttgttgctttctgttccttacgta-ttattttatgaagttttatgaacatgttg-ttggaataattt 151  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||  |||||| ||||||||||||    
T  56352 gaattttgttgttgatttctgttccttacgtatttatcttatgaagttttatgattatgttgtttggaataattt 56278  T

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Target: scaffold0338 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 15581 - 15669
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||| ||||||||||| |||||||| |||||||| ||||||||| |||| ||| |||||||||||||| |||||| |||| || ||||||    
T  15581 gatgggaattttgttgctgctttctattccttacatattattttttgaactttcatgaacatgttgtt-gaataactttaagagatttta 15669  T

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Target: scaffold0453 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 2523 - 2453
Alignment:
Q  91 tgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    ||||||| |||||||||||||||||| ||||||||| | |||||||||||||||| |||||||||| ||||||    
T  2523 tgctttccgttccttacgtattattt-atgaagtttaa-gaacatgttgttggaacaattttatgagatttta 2453  T

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Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 193083 - 193150
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttg 142  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||| | |||||||    
T  193083 gatgagaattt-gttattgctttctgttccttacgtattactttatgaagtttcatgaataagttgttg 193150  T

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Target: scaffold0364 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 218
Target Start/End: Complemental strand, 6666 - 6534
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatattttacattgagacctttatgcca 182  Q
    |||||| ||||| | ||||||||||||||| ||||||||| ||||| | ||||||||||||||  ||||||||| | ||||  ||||| ||||  |||||    
T  6666 tttgttattgctctatgttccttacgtattgttttatgaaattttaaggacatgttgttggaaccattttatgaga-tttatgttgaggccttggtgcca 6568  T
Q  183 aggttgttttaaacgttgaaatgatttccgctgcga 218  Q
    | |||| |||||| |||| ||| |||||||||||||    
T  6567 aagttg-tttaaatgttg-aataatttccgctgcga 6534  T

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Target: scaffold0065 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 54202 - 54253
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaa 132  Q
    |||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  54202 attttgttgttgctttctattccttacgtattactttatgaagtttcatgaa 54253  T

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Target: scaffold1274 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 1166 - 1098
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgta-ttattttatgaagttttatgaacatgttgtt 141  Q
    |||| ||||||||||||||||||||||||||||| || |||| ||||||| ||||||||  ||||||||    
T  1166 gatgggaattttgttgttgctttctgttccttacatatttatcttatgaatttttatgattatgttgtt 1098  T

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Target: scaffold0282 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 142
Target Start/End: Original strand, 18843 - 18910
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttg 142  Q
    ||||||||||| ||| ||||||||| |||||||||||||| |||||||||||| ||||| | |||||||    
T  18843 gatgagaattt-gttattgctttctattccttacgtattactttatgaagtttcatgaataagttgttg 18910  T

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Target: scaffold0282; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 12356 - 12415
Alignment:
Q  83 tttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttg 142  Q
    |||||| ||||||| | |||||||||||||| |||||||||||| ||||| | |||||||    
T  12356 tttgttattgctttttattccttacgtattactttatgaagtttcatgaataagttgttg 12415  T

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Target: scaffold0019 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 26618 - 26673
Alignment:
Q  67 gtaacatgatgagaattttgttgttgctttctgttccttacgtattattttatgaa 122  Q
    |||||| ||||||||||||||| ||||||||| ||||||||||||  |||||||||    
T  26618 gtaacaagatgagaattttgtttttgctttctattccttacgtatacttttatgaa 26673  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 151
Target Start/End: Original strand, 167132 - 167211
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgta-ttattttatgaagttttatgaacatgttg-ttggaataattt 151  Q
    |||| ||||||||||| ||||||||||| |||||||| |||| |||||||| |||||||  |||||| ||||||||||||    
T  167132 gatgggaattttgttgctgctttctgtttcttacgtatttatcttatgaagctttatgattatgttgtttggaataattt 167211  T

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Target: scaffold0359 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 14895 - 14833
Alignment:
Q  80 aattttgttgttgctttctgttccttacgta-ttattttatgaagttttatgaacatgttgtt 141  Q
    ||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||  ||||||||    
T  14895 aattttgttgttgctttatgttccttacgtatttatcttatgcagttttatgattatgttgtt 14833  T

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Target: scaffold0064 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 62913 - 62855
Alignment:
Q  74 gatgagaattttgttgttgcttt-ctgttccttacgtattattttatgaagttttatga 131  Q
    ||||||||||||||| ||||||| || |||||||||||||| |||||||||||| ||||    
T  62913 gatgagaattttgttattgcttttctattccttacgtattactttatgaagtttcatga 62855  T

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Target: scaffold0035 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 59737 - 59791
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagttttatgaacat 135  Q
    ||||| |||||||||||| ||||||||||||||||||||||| | | ||||||||    
T  59737 attttattgttgctttctattccttacgtattattttatgaattatcatgaacat 59791  T

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Target: scaffold0253 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 14109 - 14044
Alignment:
Q  67 gtaacatgatgagaattttgttgttg-ctttctgttccttacgtattattttatgaagttttatga 131  Q
    |||||| |||||||||||| |||||| |||||| ||||||||||||| ||||| |||| |||||||    
T  14109 gtaacaggatgagaattttattgttgtctttctattccttacgtattgttttaagaagatttatga 14044  T

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Target: scaffold0023 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 18676 - 18728
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttt 126  Q
    |||| |||||||||||||||||||| |||||||||||||  || |||||||||    
T  18676 gatgggaattttgttgttgctttctattccttacgtattgcttaatgaagttt 18728  T

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Target: scaffold0010 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 6458 - 6415
Alignment:
Q  88 tgttgctttctgttccttacgtattattttatgaagttttatga 131  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||    
T  6458 tgttgctttctattccttacgtattactttatgaagtttcatga 6415  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 399709 - 399666
Alignment:
Q  88 tgttgctttctgttccttacgtattattttatgaagttttatga 131  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||    
T  399709 tgttgctttctattccttacgtattactttatgaagtttcatga 399666  T

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Target: scaffold0962 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 215
Target Start/End: Original strand, 2071 - 2164
Alignment:
Q  125 tttatgaacatgttgttggaat--aattttatgatattttacattga-gacctttatgccaaggttgttttaaacgttgaaatgatttccgctg 215  Q
    ||||||||||| ||||||||||  |||||||||| ||| ||| |||| | ||| | |||||| ||| ||||||| |||||||| ||||||||||    
T  2071 tttatgaacatattgttggaatgaaattttatgagattctacgttgatggcctgtgtgccaaagttattttaaatgttgaaataatttccgctg 2164  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 38879 - 38945
Alignment:
Q  67 gtaacatgatgagaattttgttgttgcttt-ctgttccttacgtattattttatgaagttttatgaa 132  Q
    |||||| |||||||| |||||| ||||||| || |||||||||||||| |||||||| ||| |||||    
T  38879 gtaacaggatgagaactttgttattgcttttctattccttacgtattactttatgaattttcatgaa 38945  T

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Target: scaffold0396 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 773 - 718
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatga 131  Q
    ||||||||||| ||| ||||||| |||||||||||||||| |||||||||||| ||||    
T  773 gatgagaattt-gttattgcttt-tgttccttacgtattactttatgaagtttcatga 718  T

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Target: scaffold0207 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 12254 - 12342
Alignment:
Q  74 gatgagaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatgatatttta 163  Q
    |||||| |||||||| ||| ||||| ||||||||||||||   |||||| ||| |||||||||| |||||| |||  |||||| ||||||    
T  12254 gatgaggattttgttattg-tttctattccttacgtattaaactatgaattttcatgaacatgtcgttggattaaacttatgagatttta 12342  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 5249 - 5172
Alignment:
Q  79 gaattttgttgttgctttctgttccttacgtattattttatgaagttttatgaacatgttgttggaataattttatga 156  Q
    ||||||||||| || ||||| |||||||||||||| |||||||| | | ||||| | ||||||| | | |||||||||    
T  5249 gaattttgttgctgttttctattccttacgtattactttatgaattatcatgaataagttgttgaattgattttatga 5172  T

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Target: scaffold0106 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 20310 - 20354
Alignment:
Q  81 attttgttgttgctttctgttccttacgtattattttatgaagtt 125  Q
    ||||||||| |  |||||||||||||||||||| |||||||||||    
T  20310 attttgttgctattttctgttccttacgtattactttatgaagtt 20354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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