View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17302_high_9 (Length: 498)

Name: NF17302_high_9
Description: NF17302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17302_high_9
NF17302_high_9
[»] chr2 (49 HSPs)
chr2 (296-480)||(2294648-2294832)
chr2 (113-299)||(40613820-40614006)
chr2 (113-295)||(36168836-36169018)
chr2 (113-295)||(38273061-38273242)
chr2 (117-295)||(17473020-17473198)
chr2 (330-471)||(2322076-2322217)
chr2 (117-290)||(28863460-28863633)
chr2 (117-297)||(13438341-13438521)
chr2 (117-295)||(7465657-7465835)
chr2 (125-295)||(9058480-9058650)
chr2 (113-295)||(20700815-20700997)
chr2 (113-295)||(42257193-42257375)
chr2 (113-295)||(2533124-2533305)
chr2 (117-295)||(10249304-10249482)
chr2 (117-290)||(19930742-19930915)
chr2 (117-297)||(28381577-28381757)
chr2 (117-295)||(32505570-32505748)
chr2 (4-112)||(2294825-2294933)
chr2 (124-295)||(33436029-33436200)
chr2 (117-296)||(40701477-40701656)
chr2 (117-295)||(30915463-30915641)
chr2 (117-296)||(4060684-4060863)
chr2 (113-297)||(43490119-43490303)
chr2 (117-295)||(38882733-38882913)
chr2 (113-295)||(26891422-26891604)
chr2 (169-295)||(33436211-33436337)
chr2 (113-295)||(45097653-45097835)
chr2 (117-295)||(5574422-5574588)
chr2 (113-295)||(13365351-13365535)
chr2 (113-289)||(3439985-3440161)
chr2 (116-275)||(2997408-2997567)
chr2 (152-296)||(17819961-17820105)
chr2 (330-396)||(2304461-2304527)
chr2 (113-295)||(38732354-38732536)
chr2 (113-295)||(17823784-17823970)
chr2 (166-290)||(41575142-41575267)
chr2 (113-251)||(3737987-3738125)
chr2 (114-294)||(44151924-44152108)
chr2 (129-297)||(27864702-27864857)
chr2 (115-205)||(41758677-41758767)
chr2 (49-112)||(2304667-2304730)
chr2 (117-295)||(15428663-15428840)
chr2 (115-295)||(21301420-21301600)
chr2 (113-245)||(3034901-3035033)
chr2 (1-43)||(2310704-2310746)
chr2 (376-446)||(2332248-2332315)
chr2 (213-268)||(42849794-42849848)
chr2 (113-161)||(1750414-1750462)
chr2 (224-268)||(16096870-16096913)
[»] chr3 (49 HSPs)
chr3 (113-295)||(51419278-51419460)
chr3 (113-295)||(47531865-47532047)
chr3 (110-295)||(11347837-11348022)
chr3 (113-297)||(26141448-26141634)
chr3 (113-296)||(20764833-20765016)
chr3 (117-297)||(53982009-53982189)
chr3 (117-296)||(33644199-33644378)
chr3 (113-295)||(41189682-41189864)
chr3 (117-290)||(31456694-31456867)
chr3 (117-295)||(49607414-49607592)
chr3 (117-291)||(52629304-52629478)
chr3 (113-295)||(8076393-8076575)
chr3 (117-295)||(54868817-54868995)
chr3 (113-295)||(33118768-33118951)
chr3 (117-295)||(17470405-17470583)
chr3 (113-295)||(24699873-24700054)
chr3 (113-295)||(35536626-35536808)
chr3 (113-292)||(26754698-26754877)
chr3 (113-290)||(30801651-30801828)
chr3 (117-295)||(9562999-9563177)
chr3 (113-295)||(8956762-8956944)
chr3 (113-295)||(14623757-14623939)
chr3 (117-295)||(36707350-36707524)
chr3 (115-295)||(48375626-48375806)
chr3 (113-296)||(45058471-45058653)
chr3 (112-273)||(36331246-36331407)
chr3 (115-290)||(13897975-13898150)
chr3 (117-290)||(48587023-48587186)
chr3 (117-295)||(11095289-11095453)
chr3 (112-295)||(35965699-35965874)
chr3 (186-295)||(27714882-27714991)
chr3 (178-295)||(11907371-11907488)
chr3 (115-295)||(1758379-1758558)
chr3 (118-297)||(39670010-39670188)
chr3 (113-292)||(42823114-42823293)
chr3 (169-295)||(41080709-41080833)
chr3 (115-210)||(43746424-43746519)
chr3 (113-295)||(35093585-35093767)
chr3 (113-209)||(21746106-21746202)
chr3 (236-295)||(36331419-36331478)
chr3 (117-291)||(25395256-25395429)
chr3 (113-290)||(25407065-25407243)
chr3 (206-267)||(40480853-40480913)
chr3 (117-181)||(27714825-27714889)
chr3 (213-268)||(53581793-53581847)
chr3 (106-151)||(11140954-11140999)
chr3 (113-141)||(45127000-45127028)
chr3 (212-268)||(52629938-52629993)
chr3 (113-161)||(54246200-54246248)
[»] chr1 (40 HSPs)
chr1 (113-295)||(32813247-32813429)
chr1 (117-297)||(27564657-27564837)
chr1 (129-295)||(38632255-38632421)
chr1 (113-295)||(51898601-51898783)
chr1 (117-297)||(37649196-37649376)
chr1 (117-296)||(9474798-9474977)
chr1 (117-296)||(48716204-48716383)
chr1 (117-295)||(2581915-2582093)
chr1 (117-295)||(41758805-41758983)
chr1 (117-297)||(47452242-47452422)
chr1 (115-295)||(49811447-49811627)
chr1 (117-295)||(3000319-3000497)
chr1 (113-295)||(37926356-37926538)
chr1 (117-295)||(38595154-38595332)
chr1 (124-295)||(50630458-50630629)
chr1 (113-295)||(45044478-45044660)
chr1 (113-297)||(26440732-26440906)
chr1 (117-295)||(8346309-8346488)
chr1 (113-296)||(41608411-41608594)
chr1 (113-296)||(50590918-50591101)
chr1 (117-295)||(43132-43310)
chr1 (115-295)||(23597011-23597191)
chr1 (166-290)||(44548347-44548471)
chr1 (113-295)||(5958918-5959100)
chr1 (113-297)||(6260868-6261052)
chr1 (117-290)||(26274437-26274607)
chr1 (113-290)||(11152296-11152472)
chr1 (113-294)||(44453980-44454165)
chr1 (113-297)||(47748441-47748624)
chr1 (146-265)||(13414791-13414910)
chr1 (113-297)||(3302451-3302635)
chr1 (113-251)||(44332289-44332427)
chr1 (155-268)||(48489328-48489440)
chr1 (131-295)||(7740733-7740897)
chr1 (115-207)||(34339968-34340059)
chr1 (213-268)||(7447936-7447990)
chr1 (113-170)||(35003294-35003351)
chr1 (112-141)||(37814777-37814806)
chr1 (224-268)||(4401450-4401493)
chr1 (224-268)||(50448195-50448238)
[»] chr8 (40 HSPs)
chr8 (113-297)||(43414499-43414683)
chr8 (113-295)||(4854781-4854963)
chr8 (113-296)||(15048099-15048282)
chr8 (117-288)||(14547929-14548100)
chr8 (117-295)||(12831047-12831225)
chr8 (113-295)||(37038479-37038661)
chr8 (117-297)||(504043-504223)
chr8 (114-290)||(5957835-5958011)
chr8 (117-297)||(23122519-23122699)
chr8 (117-297)||(34012218-34012398)
chr8 (117-297)||(15197331-15197511)
chr8 (116-296)||(40423864-40424044)
chr8 (110-295)||(10284546-10284731)
chr8 (135-295)||(44507027-44507187)
chr8 (133-295)||(1179878-1180040)
chr8 (113-275)||(8841350-8841512)
chr8 (155-293)||(10621047-10621185)
chr8 (113-295)||(15258847-15259029)
chr8 (117-295)||(34307216-34307394)
chr8 (116-295)||(16056322-16056501)
chr8 (117-251)||(9122229-9122363)
chr8 (117-295)||(24307715-24307893)
chr8 (151-295)||(16383377-16383521)
chr8 (117-295)||(30479396-30479574)
chr8 (113-295)||(32032725-32032906)
chr8 (129-202)||(42710228-42710301)
chr8 (113-295)||(42221515-42221697)
chr8 (169-297)||(20074916-20075036)
chr8 (114-295)||(25838197-25838370)
chr8 (115-295)||(17443825-17444005)
chr8 (113-240)||(40467755-40467882)
chr8 (113-207)||(42354506-42354600)
chr8 (113-251)||(32707921-32708061)
chr8 (135-295)||(14055532-14055692)
chr8 (222-295)||(24307629-24307702)
chr8 (176-297)||(38229427-38229547)
chr8 (206-268)||(29705466-29705527)
chr8 (113-207)||(30183794-30183887)
chr8 (224-268)||(2547118-2547161)
chr8 (224-268)||(42197370-42197413)
[»] chr6 (27 HSPs)
chr6 (113-295)||(31976248-31976430)
chr6 (117-297)||(32869676-32869856)
chr6 (113-295)||(31110679-31110859)
chr6 (117-290)||(22880580-22880753)
chr6 (117-297)||(17598552-17598732)
chr6 (117-295)||(29857827-29858005)
chr6 (117-295)||(11427616-11427796)
chr6 (113-295)||(15989960-15990142)
chr6 (113-295)||(30341278-30341460)
chr6 (113-296)||(15507942-15508125)
chr6 (113-296)||(4231547-4231730)
chr6 (117-295)||(6209388-6209565)
chr6 (129-295)||(15832577-15832743)
chr6 (113-299)||(31952948-31953134)
chr6 (146-296)||(31109351-31109501)
chr6 (135-264)||(23128067-23128196)
chr6 (115-290)||(28536408-28536581)
chr6 (115-297)||(30870018-30870193)
chr6 (151-288)||(946383-946520)
chr6 (143-291)||(9379660-9379808)
chr6 (173-295)||(12732482-12732604)
chr6 (113-159)||(22421997-22422043)
chr6 (113-164)||(26466799-26466850)
chr6 (215-268)||(26669944-26669996)
chr6 (113-141)||(3213400-3213428)
chr6 (224-268)||(7367671-7367714)
chr6 (113-141)||(21293749-21293777)
[»] chr7 (44 HSPs)
chr7 (113-294)||(35522877-35523058)
chr7 (117-299)||(19329838-19330020)
chr7 (117-295)||(8080305-8080483)
chr7 (113-297)||(31735882-31736059)
chr7 (117-295)||(38837217-38837395)
chr7 (113-295)||(46033719-46033901)
chr7 (113-297)||(21234399-21234583)
chr7 (117-295)||(4999436-4999614)
chr7 (117-295)||(7389389-7389566)
chr7 (117-290)||(32951415-32951588)
chr7 (113-295)||(26296644-26296826)
chr7 (122-295)||(19436114-19436287)
chr7 (143-297)||(35137531-35137685)
chr7 (133-290)||(3784000-3784157)
chr7 (135-296)||(38267039-38267200)
chr7 (117-295)||(40957707-40957885)
chr7 (115-295)||(41915741-41915921)
chr7 (117-295)||(3434562-3434730)
chr7 (113-296)||(41423681-41423864)
chr7 (113-295)||(22343361-22343543)
chr7 (142-290)||(3694372-3694520)
chr7 (113-295)||(46374742-46374902)
chr7 (113-295)||(35468773-35468955)
chr7 (113-295)||(38044197-38044379)
chr7 (113-297)||(8238210-8238395)
chr7 (115-295)||(18207180-18207359)
chr7 (114-265)||(16374743-16374894)
chr7 (143-296)||(32564374-32564527)
chr7 (115-296)||(39255844-39256024)
chr7 (113-261)||(27744227-27744375)
chr7 (169-295)||(36208173-36208299)
chr7 (186-295)||(36361904-36362013)
chr7 (117-295)||(36362026-36362192)
chr7 (115-295)||(7727906-7728086)
chr7 (117-295)||(11044188-11044356)
chr7 (113-295)||(40846031-40846213)
chr7 (113-295)||(12310906-12311086)
chr7 (114-290)||(2318160-2318338)
chr7 (163-295)||(10343531-10343663)
chr7 (116-209)||(1766702-1766795)
chr7 (115-295)||(45223042-45223222)
chr7 (213-268)||(32029752-32029806)
chr7 (114-251)||(32045881-32046018)
chr7 (117-158)||(36361847-36361888)
[»] chr5 (35 HSPs)
chr5 (112-295)||(15409527-15409710)
chr5 (113-296)||(26720515-26720698)
chr5 (113-296)||(26990264-26990447)
chr5 (117-295)||(2740274-2740452)
chr5 (117-297)||(33149560-33149740)
chr5 (117-297)||(40145405-40145585)
chr5 (129-295)||(36732876-36733042)
chr5 (114-295)||(6679698-6679879)
chr5 (117-290)||(18520806-18520979)
chr5 (117-297)||(14831812-14831992)
chr5 (156-297)||(28177773-28177914)
chr5 (117-296)||(35785198-35785377)
chr5 (113-295)||(2252086-2252268)
chr5 (122-288)||(13811659-13811825)
chr5 (113-295)||(3921183-3921365)
chr5 (113-295)||(31008988-31009170)
chr5 (115-295)||(35943812-35943992)
chr5 (114-295)||(33825243-33825424)
chr5 (113-296)||(6259919-6260102)
chr5 (113-295)||(20073434-20073616)
chr5 (116-290)||(36875537-36875698)
chr5 (168-297)||(42414275-42414404)
chr5 (113-251)||(21370048-21370186)
chr5 (113-295)||(39688815-39688997)
chr5 (113-223)||(2177436-2177546)
chr5 (113-290)||(16327906-16328083)
chr5 (135-264)||(39557457-39557586)
chr5 (115-295)||(9603813-9603993)
chr5 (146-295)||(38296203-38296352)
chr5 (117-247)||(31132392-31132512)
chr5 (236-291)||(10356638-10356694)
chr5 (113-174)||(33855082-33855143)
chr5 (204-287)||(41470425-41470508)
chr5 (113-161)||(18033982-18034030)
chr5 (113-141)||(38470579-38470607)
[»] chr4 (44 HSPs)
chr4 (113-296)||(31910191-31910374)
chr4 (117-295)||(41236347-41236525)
chr4 (113-295)||(50052346-50052528)
chr4 (117-295)||(48182971-48183149)
chr4 (117-296)||(6034043-6034222)
chr4 (113-296)||(50526089-50526272)
chr4 (115-297)||(40574777-40574959)
chr4 (117-295)||(42044289-42044467)
chr4 (117-295)||(24995029-24995207)
chr4 (113-295)||(29239886-29240068)
chr4 (117-296)||(54473455-54473634)
chr4 (130-295)||(480382-480547)
chr4 (113-295)||(55475191-55475373)
chr4 (135-296)||(11511402-11511563)
chr4 (155-295)||(29234205-29234345)
chr4 (113-257)||(41823920-41824064)
chr4 (113-295)||(19670634-19670816)
chr4 (117-295)||(23608235-23608413)
chr4 (113-295)||(29547877-29548059)
chr4 (113-295)||(47986208-47986389)
chr4 (115-295)||(29977885-29978065)
chr4 (116-275)||(17983664-17983823)
chr4 (113-295)||(32766958-32767140)
chr4 (113-295)||(50813810-50813992)
chr4 (117-291)||(53352496-53352661)
chr4 (113-297)||(3481652-3481826)
chr4 (114-295)||(48647645-48647826)
chr4 (113-295)||(28480186-28480368)
chr4 (113-295)||(28481061-28481243)
chr4 (113-295)||(28481936-28482118)
chr4 (113-297)||(18924413-18924597)
chr4 (113-287)||(29589658-29589831)
chr4 (167-295)||(8343135-8343263)
chr4 (116-295)||(47104544-47104723)
chr4 (116-247)||(56300086-56300217)
chr4 (167-295)||(55079685-55079814)
chr4 (113-295)||(44536664-44536845)
chr4 (172-296)||(29535376-29535499)
chr4 (115-210)||(43487793-43487883)
chr4 (143-291)||(18769113-18769260)
chr4 (119-263)||(18768972-18769115)
chr4 (113-164)||(1771315-1771366)
chr4 (206-269)||(33703245-33703307)
chr4 (113-141)||(55966418-55966446)
[»] scaffold1268 (1 HSPs)
scaffold1268 (114-297)||(848-1031)
[»] scaffold1267 (1 HSPs)
scaffold1267 (114-297)||(848-1031)
[»] scaffold0237 (1 HSPs)
scaffold0237 (117-295)||(4029-4207)
[»] scaffold0321 (1 HSPs)
scaffold0321 (117-295)||(10031-10209)
[»] scaffold0110 (1 HSPs)
scaffold0110 (113-296)||(8781-8964)
[»] scaffold0018 (1 HSPs)
scaffold0018 (114-268)||(152525-152679)
[»] scaffold0316 (2 HSPs)
scaffold0316 (113-199)||(17199-17285)
scaffold0316 (186-297)||(17056-17163)
[»] scaffold0119 (1 HSPs)
scaffold0119 (215-268)||(798-850)


Alignment Details
Target: chr2 (Bit Score: 181; Significance: 1e-97; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 296 - 480
Target Start/End: Complemental strand, 2294832 - 2294648
Alignment:
Q  296 atgtgttgatagttatggtactttttagtagatctcttgttattaagaaaatcatgaagcaccatttcactttggccataactctattctatgcatcact 395  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2294832 atgtgttgatagttatggtactttttagtagatctcttattattaagaaaatcatgaagcaccatttcactttggccataactctattctatgcatcact 2294733  T
Q  396 tctgcacactcaaaattacaagttacaaccctataatttaagaccacagatgtttagggaggaaacataatctataaccgccaag 480  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2294732 tctgcacactcaaaattacaagttacaaccctataatttaagaccacagatgtttagggaggaaacataatctataaccgccaag 2294648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 113 - 299
Target Start/End: Original strand, 40613820 - 40614006
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||     
T  40613820 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatacattatgaagaaagaataggagagaaaagagaaagtgtgcttgtgcg 40613919  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcatgt 299  Q
    ||||||| |||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  40613920 gggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactcatgt 40614006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 36169018 - 36168836
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  36169018 ggaaaatgttacataaacaccctttattctcatacactcttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtatgcttgtgcg 36168919  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||    
T  36168918 gggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 38273061 - 38273242
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||| ||||||||||||| ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  38273061 ggaaaatattacataaacaccatttattctcatacatc-ttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctagtgcg 38273159  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38273160 gggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 17473198 - 17473020
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| || |    
T  17473198 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 17473099  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  17473098 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 330 - 471
Target Start/End: Complemental strand, 2322217 - 2322076
Alignment:
Q  330 tcttgttattaagaaaatcatgaagcaccatttcactttggccataactctattctatgcatcacttctgcacactcaaaattacaagttacaaccctat 429  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2322217 tcttgttattaagaaaatcatgaagtaccatttcattctggccataactctattctatgcatcacttcagcacactcaaaattacaagttacaaccctat 2322118  T
Q  430 aatttaagaccacagatgtttagggaggaaacataatctata 471  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2322117 aatttaagaccacagatgtttagggaggaaacataatctata 2322076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 117 - 290
Target Start/End: Complemental strand, 28863633 - 28863460
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  28863633 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 28863534  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  28863533 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 28863460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 117 - 297
Target Start/End: Complemental strand, 13438521 - 13438341
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  13438521 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 13438422  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||| | |||||||| |||||||||||||||| ||||| ||||||| || |||||| |||||||||||||| ||||||    
T  13438421 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattactcat 13438341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 7465657 - 7465835
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| | |||| |||||||||||||||||||||  ||||    
T  7465657 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaagagataaaagagaaagtgtgcttgtgtggggt 7465756  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  7465757 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 125 - 295
Target Start/End: Complemental strand, 9058650 - 9058480
Alignment:
Q  125 ataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtgg 224  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||     
T  9058650 ataaataccctttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatga 9058551  T
Q  225 ccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  9058550 ctacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 20700997 - 20700815
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||| |||     
T  20700997 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttatgcg 20700898  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||||||| | |||||||| |||||||||| || || ||||||||||||||||  |||||||||||||||||||| ||||    
T  20700897 gggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 42257375 - 42257193
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||| ||||||| |||||||||||| | |||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  42257375 ggaaaatattacatagacaccctttatttctatacactcttgtacaccccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgcg 42257276  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| |||||||||||||| |||||| ||||||||| ||| | |||||||||| |||| |||||||||||||||||||||    
T  42257275 gggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 2533305 - 2533124
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||| |||||||||||||||     
T  2533305 ggaaaatgttatatatacaccctttattcccatacacccttgtacaccccatacattgggaagagagaagaggagataaaagaaaaagtgtgcttgtgcg 2533206  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||| | ||||| |||||||| |||||||||| ||||| ||||| ||||||||||  |||||||||||||||||||||||||    
T  2533205 gggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaaggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 10249304 - 10249482
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 10249403  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| ||| ||||||||| || |||||| |||||||||||||| ||||    
T  10249404 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 117 - 290
Target Start/End: Original strand, 19930742 - 19930915
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| |||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  19930742 aatgatacatagacaccttttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 19930841  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    |||| || | |||||||| |||||||||||| ||| |||||||||||||||| |||||| ||||||||||||||    
T  19930842 ccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcat 19930915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 117 - 297
Target Start/End: Original strand, 28381577 - 28381757
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| | ||    
T  28381577 aatgatacatagacaccctttattcccatacatccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgcggagt 28381676  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||| ||| | |||||||| ||||||||||||||||  || |||||||||||| |||||| |||||||||||||| ||||||    
T  28381677 ccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactcat 28381757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 32505570 - 32505748
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||| |||||||| |||||||||||||||||||||| ||||| |||||||||| ||||||||||| ||||||||||||||||| ||||    
T  32505570 aatgatacatagacactctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaatagaaagtgtgcttgtgcggggt 32505669  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| ||| ||||||||| || |||||| |||||||||||||| ||||    
T  32505670 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 2294933 - 2294825
Alignment:
Q  4 tctttaggatacttgttgtaagtattaaaaaattagaaattagtatttgtatgaattcaatttaacctatcaaatgaaaggtgaaactgttcaagttccc 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2294933 tctttaggatacttgttgtaagtattaaaaaattagaaattagtatttgtatgaactcaatttaacctatcaaatgaaaggtgaaactgttcaagttccc 2294834  T
Q  104 aatgtgttg 112  Q
    |||||||||    
T  2294833 aatgtgttg 2294825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 124 - 295
Target Start/End: Original strand, 33436029 - 33436200
Alignment:
Q  124 cataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtg 223  Q
    |||| ||||| ||||||| |||||||||||||||||| ||| |||||||||||||||| | ||||| ||||||||||||||||||||| |||||||||||    
T  33436029 catagacaccttttattctcatacacccttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtg 33436128  T
Q  224 gccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     | |||||| | |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  33436129 actacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 117 - 296
Target Start/End: Complemental strand, 40701656 - 40701477
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| |||||| |||||||||||||||||||| || |||||||||||||||| | |||||||||||||||||||| |||||| ||||    
T  40701656 aatgatacatagacaccttttatttccatacacccttgtacacccgatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 40701557  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||||  | |||||||| |||||||||||||||| ||| |||||||||||| |||||| |||||||||||||| |||||    
T  40701556 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactca 40701477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 30915641 - 30915463
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||| || ||||| |||||||||||||||||||||||  ||||||||||||||| | ||||||||||||||||||||||||| | ||||    
T  30915641 aatgatacatagacatccattatttccatacacccttgtacaccccatgtattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 30915542  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||| |||||| || |||||||||||||||| |||||| |||||||||||||| ||||    
T  30915541 ccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 117 - 296
Target Start/End: Complemental strand, 4060863 - 4060684
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||||||| | |||||| ||||||||||||||||||||||| |||||||||||||||| | ||||||||| ||||||||||||| ||| || |    
T  4060863 aatgatacataaacatcttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaaaagaaagtgtgcttatgcgggat 4060764  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||||  | |||||||| |||||||||||| ||| ||| ||||||||| || |||||| |||||||||||||| |||||    
T  4060763 ccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactca 4060684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 113 - 297
Target Start/End: Complemental strand, 43490303 - 43490119
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||| ||  ||||||||||||||| || |||  ||||| ||||||| |||||||     
T  43490303 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagataaagtgtacttgtgcg 43490204  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    |||||||  ||||||| ||||| |||||||||||||||| || |||||||||| || |||||| ||| |||||||||||||||||    
T  43490203 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactcat 43490119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 38882733 - 38882913
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc---ag 213  Q
    |||| |||||| | ||| |||||||||||||||||||||||||||||| ||||||||||||| || |  ||||||||||||||||| ||||||||    |    
T  38882733 aatgatacatagagaccatttattcccatacacccttgtacaccccatgcattaggaagagataagataagagaaaagagaaagtgcgcttgtgcggggg 38882832  T
Q  214 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||||| | |||||||| |||||||||||| ||| ||||||| |||||||| |||||| |||||||||||||| ||||    
T  38882833 ggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 26891422 - 26891604
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||| |||  |||||||  || |||||||  || ||||||||||||||| || |||| ||||||||| ||||||||| |     
T  26891422 ggaaaatgttacatatacacccttaattttcatacacatttttacaccctgtatattaggaagagagaagagaagaggaaagagaaaatgtgcttgttcg 26891521  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     |||||||||| |||| ||||| ||||||||||||||||  | ||||||||||||| |||||| || ||||||||||||||||    
T  26891522 aggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 33436337 - 33436211
Alignment:
Q  169 taggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||||||||| |||| || ||||||||||||||||||||||  |||||| ||| ||||||||| |||||| ||||||||| ||| ||||||||||||    
T  33436337 taggaagagagaagaggataggaaagagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgcca 33436238  T
Q  269 tctaaggatgtctatgtatcataactc 295  Q
    |||||||||||||||||||||| ||||    
T  33436237 tctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 45097653 - 45097835
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||| | |||| |  ||||||| |||||||| || ||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  45097653 ggaaaatgttacataaacatcttttaattgcatacactcttgtacatccgatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 45097752  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  ||||||| ||||| |||||||| ||||||| || || |||||||||| |||||||||| |||||||||||||||    
T  45097753 gggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 45097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 5574422 - 5574588
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||            |||||||||||||||||||||| || |    
T  5574422 aatgatacatagacaccctttattcccatacacccttgtacacgccatgcattaggaagag------------aaaagagaaagtgtgcttgtgcgggat 5574509  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||| ||||||||| |||||||||||||||| |||||  |||||||||||||| ||||    
T  5574510 ccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 13365535 - 13365351
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||| ||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  13365535 ggaaaatgttacatagacaccttttaattgcattcacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 13365436  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaagg--atgtctatgtatcataactc 295  Q
    |||||||  ||| ||| ||||| |||||||||||||||| || |||| |||||||||||||||   ||| |||||||||||||||    
T  13365435 gggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgtgtttatgtatcataactc 13365351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 113 - 289
Target Start/End: Complemental strand, 3440161 - 3439985
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||||| |||   ||| ||||||||| ||||||| ||||||||| |||||||||||     
T  3440161 ggaaaatgttacatagacaccctttatttccatacacctttgtacaccctatattctagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcg 3440062  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatca 289  Q
    ||||||||||   ||| ||| | ||||||||||||||||  | | ||||||||||| |||||| |||||| ||||||    
T  3440061 gggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 116 - 275
Target Start/End: Original strand, 2997408 - 2997567
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    |||||||||||| ||||  |||| |  |||||||||||||||||| |||  ||||||||||||||| || |||  ||||||||||||| ||||||| |||    
T  2997408 aaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 2997507  T
Q  216 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaagg 275  Q
    ||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| ||||||    
T  2997508 tccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 152 - 296
Target Start/End: Original strand, 17819961 - 17820105
Alignment:
Q  152 ttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgt 251  Q
    ||||||||| ||| |||||||||||||||| ||||||  ||||||||| |||| |||||  ||||||||||  |||| ||||| ||||||||||||||||    
T  17819961 ttgtacacctcatgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgt 17820060  T
Q  252 taaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
     || ||||||||||||| |||  | ||||||||||||||||||||    
T  17820061 caaggggtgtattgccacctatagttgtctatgtatcataactca 17820105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 330 - 396
Target Start/End: Complemental strand, 2304527 - 2304461
Alignment:
Q  330 tcttgttattaagaaaatcatgaagcaccatttcactttggccataactctattctatgcatcactt 396  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2304527 tcttgttattaagaaaatcatgaagcaccatttcactttggccataactctattctatgcatcactt 2304461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 38732536 - 38732354
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||| ||||||||| | |||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  38732536 ggaaaatgttacatagacaccttttaattgcatacatccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 38732437  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  || |||| ||||| |||||||||||||||| || || ||||||| ||  ||||| ||| |||||||||||||||    
T  38732436 gggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 17823970 - 17823784
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||| ||||||||  ||||||||||||||||||||||| ||| ||||||||||| | ||||  |||||||||||||||||||       
T  17823970 ggaaaatgttacatagacatcctttatttacatacacccttgtacaccccatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtatg 17823871  T
Q  213 gggtcc----acgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||    |  | |  |||||||| ||||||||||||||||| | |  |||||||||| |||||||||| |||||||||| ||||    
T  17823870 gggtccatatatatagttacgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactc 17823784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 166 - 290
Target Start/End: Complemental strand, 41575267 - 41575142
Alignment:
Q  166 cattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg-tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtatt 264  Q
    |||||||| ||||||| ||||||  |||||||||||||||||||| |||| ||||| || |||| ||||| |||||||||||  ||| ||||||||||||    
T  41575267 cattaggacgagagaagaggagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtatt 41575168  T
Q  265 gccatctaaggatgtctatgtatcat 290  Q
     |||||||||||||||||||||||||    
T  41575167 accatctaaggatgtctatgtatcat 41575142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 113 - 251
Target Start/End: Complemental strand, 3738125 - 3737987
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||||| ||||  |||||||| |||||||||| |||   |||||||| |||| ||||||| ||| ||||| |||||||||||     
T  3738125 ggaaaatgttacatagacaccctatattttcatacacctttgtacaccctatattctaggaagaaagaagaggagaggaaaaagaaaatgtgcttgtgcg 3738026  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgt 251  Q
    |||||||| || |||| ||||| ||||||||||||||||    
T  3738025 gggtccacatgaccacatgtcagatttttgtgtgggtgt 3737987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 114 - 294
Target Start/End: Complemental strand, 44152108 - 44151924
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 213  Q
    |||||||||||||||||||| ||||||| |||||||||||||| | | ||| |||||||||||||||| ||||||  ||||||||||||||||||||  |    
T  44152108 gaaaatgttacataaacaccttttattcgcatacacccttgtatatctcatgcattaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtgg 44152009  T
Q  214 ggt---ccacgtggccacgtgtcata-tttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataact 294  Q
    | |   | || |  |||||||||| | ||||| ||| |||||||||| |||||||| || |||  | ||||||||||||||||||    
T  44152008 gattcactacataaccacgtgtcagattttttttgtaggtgttaaagagtgtattgtcacctatagttgtctatgtatcataact 44151924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 129 - 297
Target Start/End: Complemental strand, 27864857 - 27864702
Alignment:
Q  129 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccac 228  Q
    ||||||||||||| |||||||||||||||| |||||  ||||||||||||             |||||||||||||||| ||| |||||||||||   ||    
T  27864857 acaccctttattctcatacacccttgtacatcccatgtattaggaagaga-------------aagagaaagtgtgcttttgcggggtccacgtgattac 27864771  T
Q  229 gtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    |||||| |||||||||||| ||| ||||||||||||||||  ||||| |||||||||||||| ||||||    
T  27864770 gtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattactcat 27864702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 41758767 - 41758677
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgc 205  Q
    ||||||||||||| ||||  ||||||| |||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||    
T  41758767 aaaatgttacatagacacattttattctcatacatccttgtacaccccatatattaggaagagagaagaggagataaaagagaaaatgtgc 41758677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 112
Target Start/End: Complemental strand, 2304730 - 2304667
Alignment:
Q  49 tttgtatgaattcaatttaacctatcaaatgaaaggtgaaactgttcaagttcccaatgtgttg 112  Q
    |||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2304730 tttgtacgaactcaatttaacctatcaaatgaaaggtgaaattgttcaagttcccaatgtgttg 2304667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 15428663 - 15428840
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    ||||||||||| ||| | ||||  | ||||||||||||||||||| ||  | ||| |||||| || ||||||  ||||||||| |||| ||| |  ||||    
T  15428663 aatgttacatagacatcatttaccctcatacacccttgtacaccc-atgtactagaaagagaaaagaggagatgaaagagaaaatgtgtttgcgtggggt 15428761  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
      || ||||||| ||||| ||||||||||| ||||||| |||||||| ||||  ||||||||| |||||||||||||||    
T  15428762 ttacatggccacatgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcataactc 15428840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 115 - 295
Target Start/End: Original strand, 21301420 - 21301600
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||| ||| |||||||||||| |||||||| | |||||||| ||| || |||||||| |||| || ||| ||||||||||||||| ||||| ||     
T  21301420 aaaatgttagatacacaccctttatttccatacactcatgtacacctcatgcactaggaagaaagaagagaagataaaagagaaagtgtgtttgtgtaga 21301519  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||| ||  ||||| ||  ||||||||||| || |  | | || ||||||||  ||| ||||||||| |||| ||||||    
T  21301520 gtccacatgatcacgtatctgatttttgtgtgagtatcgaggagtatattgccacttaaagatgtctatctatcgtaactc 21301600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 245
Target Start/End: Original strand, 3034901 - 3035033
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||||| | ||||||| |||  ||||||||||||||| || |||  ||||||||||| | |||||||     
T  3034901 ggaaaatgttacatagacaccttttaattgcatacaccttggtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 3035000  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgt 245  Q
    |||||||  || |||| ||||| ||||||||||    
T  3035001 gggtccatatgaccacatgtcagatttttgtgt 3035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2310746 - 2310704
Alignment:
Q  1 gtgtctttaggatacttgttgtaagtattaaaaaattagaaat 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  2310746 gtgtctttaggatacttgttgtaagtattaaaaaattagaaat 2310704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 446
Target Start/End: Complemental strand, 2332315 - 2332248
Alignment:
Q  376 actctattctatgcatcacttctgcacactcaaaattacaagttacaaccctataatttaagaccacagat 446  Q
    |||||||||| ||||||| ||||||||  |||||||||||| ||||||||||  || ||||||||||||||    
T  2332315 actctattctttgcatcatttctgcac--tcaaaattacaaattacaaccct-gaaattaagaccacagat 2332248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 42849848 - 42849794
Alignment:
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  42849848 gggtccaagttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 42849794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 1750414 - 1750462
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccc 161  Q
    |||||||||||||| ||||||||||||||| | || || ||||||||||    
T  1750414 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccc 1750462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 16096870 - 16096913
Alignment:
Q  224 gccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||    
T  16096870 gccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 16096913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 1e-79; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 51419278 - 51419460
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  51419278 ggaaaatgttacataaacaccttttatttccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcg 51419377  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||| | |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  51419378 gggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 47532047 - 47531865
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  47532047 ggaaaatgttacataaacaccctttattcccatacacacttgtacattccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcg 47531948  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||| ||  ||||||||||||| ||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  47531947 gggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 110 - 295
Target Start/End: Original strand, 11347837 - 11348022
Alignment:
Q  110 ttgggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |    
T  11347837 ttgggaaaatggtacatagacaccctttattcccatacacccttatacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttat 11347936  T
Q  210 gcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||||| |||||||||||||| |||||||||||| ||| ||||| ||||||| || ||||||||||||||||||||||||||    
T  11347937 gcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 113 - 297
Target Start/End: Original strand, 26141448 - 26141634
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagaga--gaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  26141448 ggaaaatgttacatagacaccctttatttccatacactcttgtacaccccatacattaggaagagaaagaagaggagagaaaagagaaagtgtgcttgtg 26141547  T
Q  211 cagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
      ||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26141548 tggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactcat 26141634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 113 - 296
Target Start/End: Original strand, 20764833 - 20765016
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |     
T  20764833 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacg 20764932  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||||| |||||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||| ||||||||||    
T  20764933 gggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactca 20765016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 117 - 297
Target Start/End: Complemental strand, 53982189 - 53982009
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  53982189 aatgatacatagacaccctttattcccatacaaccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 53982090  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||||    
T  53982089 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcat 53982009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 117 - 296
Target Start/End: Complemental strand, 33644378 - 33644199
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  33644378 aatgatacatagacaccctttattcccatacacccttatacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 33644279  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| | |||| |||||||||||||| |||||    
T  33644278 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattactca 33644199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 41189682 - 41189864
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  41189682 ggaaaatgttacatagacaccctttatttccatacactcttgtacactccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgcg 41189781  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| |||||||||||||| |||||| ||||||||| ||| | |||||||||| |||||||||| |||||||||||||||    
T  41189782 gggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 117 - 290
Target Start/End: Complemental strand, 31456867 - 31456694
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  31456867 aatgatacataaacaccctttattcccatgcacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 31456768  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    |||| || | |||||||| |||||||||||||||| |||||||||||||||  ||| || ||||||||||||||    
T  31456767 ccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcat 31456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 49607592 - 49607414
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||  ||| ||||||||||||| || ||||||||||||||||||||||||||||  || |    
T  49607592 aatgatacatagacaccctttattcccatacacccttgtacacgtcatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggat 49607493  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  49607492 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 117 - 291
Target Start/End: Complemental strand, 52629478 - 52629304
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||| ||||| ||||||||||||||||| ||||| |||||||||||||||| | ||||||||||||||||||||||||| | ||||    
T  52629478 aatgatacatagacacccattatttccatacacccttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 52629379  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcata 291  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||||    
T  52629378 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcata 52629304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 8076575 - 8076393
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| |||||||  ||||||||||||| || ||||||||||||| ||||||| |||||||||||||||||||||     
T  8076575 ggaaaatgttacatagacaccatttattctcatacacttttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcg 8076476  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||||||| | |||||| | |||||||||||||||| |||||||||| ||||| |||||| ||| |||||||||| ||||    
T  8076475 gggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 54868817 - 54868995
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| |||||| |||||||||||||||||||| || |||||||||||||||| | |||||||||||||||||||| |||||| ||||    
T  54868817 aatgatacatagacaccttttatttccatacacccttgtacaccctatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 54868916  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||  | |||||||| |||||||||||||||| ||| |||||||||||| |||||| |||||||||||||| ||||    
T  54868917 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 33118768 - 33118951
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaat-aggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||| || |||||||||||| ||||||||||||||||||||||| || |||| ||||||||  ||||||| |||||||||||||| || ||     
T  33118768 ggaaaatgttacgtagacaccctttatttccatacacccttgtacaccccatgcactagggagagagaaggaggagaggaaagagaaagtgtgtttctga 33118867  T
Q  212 agggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     || |||||||| | |||||||| |||||||||||||||| ||||||||||||| || |||||| |||||||||||||||||||    
T  33118868 gggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 17470583 - 17470405
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| ||||||| ||||||   ||||||| ||||| |||||||||||||||| | ||||||||||||||||||||||||||  ||||    
T  17470583 aatgatacatagacaccatttattctcatacatatttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgtggggt 17470484  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||||||| |||||||||||| |||| | |||||||||||||| ||||    
T  17470483 ccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 24699873 - 24700054
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||| | ||||||| |||||| | || |||||| |||| | ||||||||||||| ||||||| |||||||||||||| |||| ||    
T  24699873 ggaaaatgttacatagacatcttttattctcatacatc-ttatacacctcataaactaggaagagagaagaggagaggaaagagaaagtgtgtttgtaca 24699971  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||||||||||||||| || |||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||| ||||    
T  24699972 gggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 35536808 - 35536626
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| ||||||||||| |||||||||| || ||||||||||||| || |||  |||||| ||||||||||||| |    
T  35536808 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtgta 35536709  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     ||||||| || |||||||||| |||||| ||||||||| ||| ||||||||||||  |||||||||||||||||||| ||||    
T  35536708 aggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 113 - 292
Target Start/End: Complemental strand, 26754877 - 26754698
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||| ||||||| ||||||||| |||||||||| |||   ||||||||||||| ||||||| ||||||||| |||||||||||     
T  26754877 ggaaaatgttacatagacactctttatttccatacacctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcg 26754778  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataa 292  Q
    ||||||| ||| |||| ||||| |||||||||||| |||  ||||||||||||||| |||||| |||||||| |||||||    
T  26754777 gggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcataa 26754698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 113 - 290
Target Start/End: Original strand, 30801651 - 30801828
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||  | ||||||||||||| | ||||| ||||||||| ||||||||||      
T  30801651 ggaaaatgttacatagacaccttttattctcatacacccttgtacaccccatgtactaggaagagagaagatgagaggaaagagaaaatgtgcttgtgtg 30801750  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    |||||||  || | || |||||||||||||||||||| | ||||||||||||  || |||||| ||||||||||||||    
T  30801751 gggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcat 30801828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 9563177 - 9562999
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| | |||||||||||||||||||| ||||||| | ||| |||||||||||||||| ||||||||| |||||||||||| ||||||||| |    
T  9563177 aatgatacatagataccctttattcccatacacctttgtacaactcatgcattaggaagagagaagaggagagaagagagaaagtgtgtttgtgcaggat 9563078  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||| | ||| ||| ||||| ||||||| ||||||| | ||| |||||||||| ||||    
T  9563077 ccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattactc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 8956944 - 8956762
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||| | ||||||| ||||||||||| |||||||  | || ||||||||||||| || |||  |||||| ||||||||||||| |    
T  8956944 ggaaaatgttacatagacagcatttattctcatacacccttctacaccctgtgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtgta 8956845  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     ||||||| ||  ||||||||| |||||| ||||||||| ||||| ||||||||||  |||||||||||||||||||| ||||    
T  8956844 aggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 14623757 - 14623939
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| |||||| |||| |||||| ||| || ||| ||||||||| || |||  ||||||||||||||||||||      
T  14623757 ggaaaatgttacatagacaccatttattctcatacatccttctacacctcatgcactagaaagagagaagagaagatgaaagagaaagtgtgcttgtgtg 14623856  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     ||||||| ||  ||| ||||| |||||| ||||||||| || ||||||||||||| ||||||||||||||||||||| ||||    
T  14623857 aggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 36707350 - 36707524
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| ||||||||||||||  |||||||||| ||| |||||||||||||||| |||||||||||||||||||||||    || || |    
T  36707350 aatgatacatagacaccttttattcccatacattcttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgc----gcgggat 36707445  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||  | |||||||| |||||||||||| ||| ||||||||||||| || |||||| | |||||||||||| ||||    
T  36707446 ccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 115 - 295
Target Start/End: Original strand, 48375626 - 48375806
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||| |||||||||||| ||||||| | |||||||||| |||   ||||||||||||| ||||||| ||||||||| ||||||||||| ||    
T  48375626 aaaatgttacatagacaccctttatttccatacatctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 48375725  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||| ||| ||||  |||| |||||||| ||| | || | |||||||||| || |||||| |||||||| ||||||||||    
T  48375726 gtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcataactc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 113 - 296
Target Start/End: Original strand, 45058471 - 45058653
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||||| |||||||||||||  ||||||||||||||| || |||  ||||||||||| | |||||||     
T  45058471 ggaaaatgttacatagacaccttttaattgcatacaccattgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 45058570  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    |||||||  ||| ||| ||||| |||||| |||||||| | ||||||||||||||| |||||| ||| ||||||||||||||||    
T  45058571 gggtccatatggtcacatgtcagatttttatgtgggtg-tcaagggtgtattgccacctaagggtgtttatgtatcataactca 45058653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 112 - 273
Target Start/End: Original strand, 36331246 - 36331407
Alignment:
Q  112 gggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||||| ||| | |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||    
T  36331246 gggaaaatgttacatatacatcttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 36331345  T
Q  212 agggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaa 273  Q
     |||||||  ||||||| ||||| |||||||||||||||| || ||||| ||||||| ||||    
T  36331346 ggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 115 - 290
Target Start/End: Original strand, 13897975 - 13898150
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||| ||| ||||| ||||||| |||||||  || ||||||||||||| |||| |||||||| || |||  ||||||||||||||||||||   |    
T  13897975 aaaatgttagatagacaccatttattctcatacacttttctacaccccatacactagggagagagaagagaagatgaaagagaaagtgtgcttgtgtgag 13898074  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    |||||| ||  ||||||||| |||||| ||||||||| || ||||||||||||| |||||||||| ||| ||||||    
T  13898075 gtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcat 13898150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 117 - 290
Target Start/End: Original strand, 48587023 - 48587186
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||          ||||||||||||||| ||||||| || |    
T  48587023 aatgatacatagacaccctttattcccatatacccttgtacatcccatgcattaggaagaga----------gaaaagagaaagtgtacttgtgcgggat 48587112  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    ||||||| | |||||||| |||||| ||| ||||| |||||||||||||||| |||||| | ||||||||||||    
T  48587113 ccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcat 48587186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 11095289 - 11095453
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| ||||||||||||||||||| || |||||||||||||            |||||||||||||| || ||| ||||    
T  11095289 aatgatacatagacaccctttattctcatacacccttgtacacccgatgcattaggaagaga------------aaagagaaagtgtgtttatgcggggt 11095376  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
      ||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  11095377 --acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 295
Target Start/End: Original strand, 35965699 - 35965874
Alignment:
Q  112 gggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||||| ||||| ||||||| |||||||||||||||||| |||  |||| ||| ||| || ||||||| |||||||||||||||||||||    
T  35965699 gggaaaatgttacatagacaccttttattctcatacacccttgtacacctcatgaattaagaaaagaaaagaggagaggaaagagaaagtgtgcttgtgc 35965798  T
Q  212 agggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||| |        |||||||||| |||||| ||||||||| ||||| ||||||  ||  ||||||||| |||||||||| ||||    
T  35965799 aggat--------ccacgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 186 - 295
Target Start/End: Original strand, 27714882 - 27714991
Alignment:
Q  186 agagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgt 285  Q
    ||||| |||||||||||||||||||| |||||||| || | |||||||| |||||||||||||||| |||||||||||| ||| |||| | |||||||||    
T  27714882 agagagaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgt 27714981  T
Q  286 atcataactc 295  Q
    ||||| ||||    
T  27714982 atcattactc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 178 - 295
Target Start/End: Complemental strand, 11907488 - 11907371
Alignment:
Q  178 agaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggat 277  Q
    |||| ||||||||||||||||| ||||||||||| |||||||  || |||| ||||| ||||||||||| ||||| | | |||||||| || |||||| |    
T  11907488 agaagaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggt 11907389  T
Q  278 gtctatgtatcataactc 295  Q
    ||||||||||||||||||    
T  11907388 gtctatgtatcataactc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 115 - 295
Target Start/End: Original strand, 1758379 - 1758558
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||||||||  |||||||  ||||||| |||||||||| || |||||||||||||||| ||||||  ||||||||| |||| |||||  |     
T  1758379 aaaatgttacataaacactgtttattc--atacacctttgtacaccc-atgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtgga 1758475  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaa--agggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||||  |||  ||||| |||||||||||||||| ||   ||||||||||| | ||| || || ||||||||||||||||    
T  1758476 gtccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatggttgactatgtatcataactc 1758558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 118 - 297
Target Start/End: Complemental strand, 39670188 - 39670010
Alignment:
Q  118 atgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtc 217  Q
    |||||||| | ||| | |||||| || |||||||||||||| | ||||||||| |||||||||| |||||||||||||| |||||||| ||| |  ||||    
T  39670188 atgttacacagacatcatttatttccgtacacccttgtacatctcatacattaagaagagagaagaggagagaaaagaggaagtgtgcgtgtacgaggtc 39670089  T
Q  218 cacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||| ||  ||||||||| |||||| | | | ||| || || | ||||||||  ||||||||||||||||| |||||||||    
T  39670088 cacatgatcacgtgtcaaatttttatatagatgtcaagggatatattgccacataaggatgtctatgtat-ataactcat 39670010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 292
Target Start/End: Complemental strand, 42823293 - 42823114
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||||||||||||||| |||  ||||||||||||||| || | |  ||||||||||| | ||| |||     
T  42823293 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaataagaaagagaaagtatacttatgcg 42823194  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataa 292  Q
    |||||||  || |||| ||||| |||||| ||||||||| || ||||||||| |||  ||| | ||| ||||||||||||    
T  42823193 gggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcataa 42823114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 41080833 - 41080709
Alignment:
Q  169 taggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||||||||| ||||||  ||||||||| ||||||||||  |||||||| || |||| | ||| ||||||| |||||||| ||||||||| |||| |    
T  41080833 taggaagagagaagaggagatgaaagagaaaatgtgcttgtg-tgggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta 41080735  T
Q  269 tctaaggatgtctatgtatcataactc 295  Q
     ||||||||||||||||||||| ||||    
T  41080734 -ctaaggatgtctatgtatcattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 43746519 - 43746424
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||| ||| || |||||||| |||| ||||||  ||||||||| |||| |||||    
T  43746519 aaaatgttacataaacaccctttgttgtcatacacccttgtacacctcatgcactaggaagaaagaagaggagatgaaagagaaattgtgtttgtg 43746424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 35093767 - 35093585
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    |||||||||||| || ||| | ||||||| |||||||| ||||||| | ||| || ||||||||||||| |  |||   ||||||||||||||||||       
T  35093767 ggaaaatgttacctagacatcatttattctcatacacctttgtacatctcatgcactaggaagagagaaaaaaagatgcaagagaaagtgtgcttgtatg 35093668  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    | || ||| || |||| ||||| ||||||| |||| ||| ||| | ||||||| || |||| | |||||||||||| ||||||    
T  35093667 gagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatcgtaactc 35093585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 209
Target Start/End: Original strand, 21746106 - 21746202
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    ||||||| ||||||  ||| | ||||||  |||||||||||||||||| |||| ||| ||||||||||| | ||||  |||||||||||||||||||    
T  21746106 ggaaaatattacatggacatcatttatttacatacacccttgtacacctcatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgt 21746202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 36331419 - 36331478
Alignment:
Q  236 atttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||||||| ||| || ||||| |||||||||||||| ||| |||||||||||||||    
T  36331419 atttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactc 36331478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 291
Target Start/End: Original strand, 25395256 - 25395429
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    ||||||||||| ||| | ||||| | |||||| | |||||||||| ||  | ||| |||||| || || |||  ||||||||| |||| |||||  ||||    
T  25395256 aatgttacatagacatcttttatcctcatacatctttgtacaccc-atgtactagaaagagaaaagagaagatgaaagagaaaatgtgtttgtgtggggt 25395354  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcata 291  Q
    | |  | ||||| ||||| |||||||||||||| |||| || ||||| ||||  ||||||||| |||||||||||    
T  25395355 ctatatagccacatgtcagatttttgtgtgggtattaagggatgtatggccacataaggatgtttatgtatcata 25395429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 290
Target Start/End: Original strand, 25407065 - 25407243
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| |||  ||||||||||||  ||| |   || ||||||  |||||||||  |||||||| ||||||  |||||||||||||| |||||      
T  25407065 ggaaaatgttatatagtcaccctttattcttatatatatttatacaccttatacattagtgagagagaagaggagatgaaagagaaagtgtgtttgtgtg 25407164  T
Q  213 gggtccacgtggccacgtgtcata-tttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    || ||||  ||  ||||||||| | |||||||||| |||| || |||| |||||||| ||| || ||| ||||||||||    
T  25407165 ggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatcat 25407243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 40480853 - 40480913
Alignment:
Q  206 ttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcc 267  Q
    ||||| |||||||| || ||||||||||| | ||||||||||||| ||||||||||||||||    
T  40480853 ttgtgtagggtccaggttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcc 40480913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 27714825 - 27714889
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaa 181  Q
    |||| |||||| |||| |||||||| | ||||||||||||||||||||  ||| |||||||||||    
T  27714825 aatgatacatatacactctttattctcgtacacccttgtacaccccatgtattgggaagagagaa 27714889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 53581847 - 53581793
Alignment:
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  53581847 gggtccaggttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 53581793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 11140954 - 11140999
Alignment:
Q  106 tgtgttgggaaaatgttacataaacaccctttattcccatacaccc 151  Q
    |||||| ||||||||||||||| |||||||||| || |||||||||    
T  11140954 tgtgtttggaaaatgttacatagacaccctttagtctcatacaccc 11140999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 45127028 - 45127000
Alignment:
Q  113 ggaaaatgttacataaacaccctttattc 141  Q
    |||||||||||||||||||||||||||||    
T  45127028 ggaaaatgttacataaacaccctttattc 45127000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 268
Target Start/End: Original strand, 52629938 - 52629993
Alignment:
Q  212 agggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    |||||||| || || |||||||| | ||||||||||||| |||||||||||||||||    
T  52629938 agggtccaggttgctacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 52629993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 54246248 - 54246200
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccc 161  Q
    |||||||||||||| ||||||||||||||| | || || ||||||||||    
T  54246248 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccc 54246200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 1e-79; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 32813429 - 32813247
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  32813429 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 32813330  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32813329 gggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 117 - 297
Target Start/End: Original strand, 27564657 - 27564837
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  27564657 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 27564756  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    |||||||   |||||||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| ||||||    
T  27564757 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactcat 27564837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 129 - 295
Target Start/End: Original strand, 38632255 - 38632421
Alignment:
Q  129 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccac 228  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||| | ||    
T  38632255 acaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgactac 38632354  T
Q  229 gtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||| |||||||||||| ||||||| |||||||||||| |||||| |||||||||||||| ||||    
T  38632355 gtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 51898601 - 51898783
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||| ||||||| ||| |||||||||||||||||     
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 51898700  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    || |||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||| |||||||||||||||| ||||    
T  51898701 ggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 117 - 297
Target Start/End: Complemental strand, 37649376 - 37649196
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||| |  |    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagggaaagtgtgcttgtgcggaat 37649277  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
     |||||| |||||||||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||||| ||||||    
T  37649276 tcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactcat 37649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 117 - 296
Target Start/End: Original strand, 9474798 - 9474977
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||| |||||||| |||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  9474798 aatgatacatagacactctttattctcatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 9474897  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| |||||    
T  9474898 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 9474977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 117 - 296
Target Start/End: Original strand, 48716204 - 48716383
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||| ||||||||||||||| ||||    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggt 48716303  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||||| | |||||||| |||||||||||| ||| ||| |||||||||||| |||||| |||||||||||||| |||||    
T  48716304 ccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactca 48716383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 2582093 - 2581915
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| ||||||||||||||||||||  ||||||||||||||||| |||  ||||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  2582093 aatgatacataaacaccctttattctaatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaaaagaaagtgtgcttgtgcggggt 2581994  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  2581993 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 41758983 - 41758805
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 41758884  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||| ||| | |||||||| |||||||||||| ||| ||||||||||||||||| ||| | |||||||||||||| ||||    
T  41758883 ccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 117 - 297
Target Start/End: Original strand, 47452242 - 47452422
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||| ||||||||||||||| ||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| || |    
T  47452242 aatgatacatagacactctttattcccatacatccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 47452341  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||| | |||||| | |||||||||||||||| |||||||||||| ||| |||||| |||||||||||||| ||||||    
T  47452342 ccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcat 47452422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 115 - 295
Target Start/End: Original strand, 49811447 - 49811627
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |     
T  49811447 aaaatgttacatagacaccctttattctcatacacccttgtgcaccacatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgga 49811546  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||| |  |||| |||||||| |||||||||||| ||| ||| ||||||||| || |||||||||||||| |||||||||||    
T  49811547 gtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 3000497 - 3000319
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||| || ||||| |||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| | ||||    
T  3000497 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 3000398  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| ||| |||||||||| ||||    
T  3000397 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 37926356 - 37926538
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||| ||| ||| ||||| ||||||| |||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |     
T  37926356 ggaaaatattatatagacaccatttattcacatacatccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtacttgtacg 37926455  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    || |||| |||||||||||||| |||||| ||||||||||||| | |||||||||| |||| ||| |||||||||||||||||    
T  37926456 ggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 38595332 - 38595154
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||| || ||||| |||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| | ||||    
T  38595332 aatgatacatagacatccattatttccatacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggt 38595233  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||| | ||| |||||||||| ||||    
T  38595232 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 124 - 295
Target Start/End: Complemental strand, 50630629 - 50630458
Alignment:
Q  124 cataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtg 223  Q
    |||| ||||| ||||||| ||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  50630629 catagacaccatttattctcatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtg 50630530  T
Q  224 gccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     | |||||||| ||||||||||||||   ||||| |||||||||| |||||| | |||||||||||| ||||    
T  50630529 actacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 45044478 - 45044660
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    |||||||||||| || ||| | ||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||| ||||||     
T  45044478 ggaaaatgttacgtagacatcatttattctcatacacccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaaatgtgtttgtgcg 45044577  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| ||||| || ||||| |||||||| ||||||| ||| |||||||||||| |||||||  | |||||||||||||||    
T  45044578 gggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcataactc 45044660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 113 - 297
Target Start/End: Complemental strand, 26440906 - 26440732
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||  |||||||||| ||||||||||          |||||||||||||||| |||     
T  26440906 ggaaaatgttacataaacatcctttattcctatacacccttgtacattccatacattacgaagagagaa----------aagagaaagtgtgcttatgcg 26440817  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    || |||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||    
T  26440816 ggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatcctaactcat 26440732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 8346309 - 8346488
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaat-aggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    |||| |||||||| ||| ||||||| |||||||| |||||||| |||| ||||||||||||| ||  |||||||||||||||||||||||||||||||||    
T  8346309 aatgatacataaataccatttattctcatacacctttgtacactccatgcattaggaagagaaaaagaggagagaaaagagaaagtgtgcttgtgcaggg 8346408  T
Q  216 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||| | |||||||| |||||||||||||||| ||| |||||||||||| |||| | || ||||||||||| ||||    
T  8346409 tccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattactc 8346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 113 - 296
Target Start/End: Original strand, 41608411 - 41608594
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||| ||  ||||||||||||||| || |||  ||||||||||||| ||||| |     
T  41608411 ggaaaatgttacataaacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtacg 41608510  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    |||||||  ||||||| ||||| ||||||||||| |||| || ||||||||||||| |||||||||| ||||||||||||||||    
T  41608511 gggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactca 41608594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 113 - 296
Target Start/End: Original strand, 50590918 - 50591101
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| | ||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  50590918 ggaaaatgttacatagataccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50591017  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    |||||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| ||||||||||||||||    
T  50591018 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactca 50591101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 43310 - 43132
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| | |||||||||||  |||||| |||||||||||||| |||||| ||||||||  ||||||||||||||||||||||||||||| | ||    
T  43310 aatgatacatagataccctttattcttatacactcttgtacaccccatgcattagaaagagagaggaggagagaaaagagaaagtgtgcttgtgcggagt 43211  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| ||||| ||||||| |  |||||  |||||||||||||| ||||    
T  43210 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 115 - 295
Target Start/End: Original strand, 23597011 - 23597191
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||| |||   ||||||| |||||| ||||| ||||| |||  | |||||| |||||||||||||||||||| |||||||| ||||||| |    
T  23597011 aaaatgttacatagacattttttattctcatacatccttggacacctcatgaactaggaatagagaataggagagaaaagataaagtgtgtttgtgcaag 23597110  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||| |||||||||||||||| |||||| ||||||| | |||| ||||||||||| |||| |||||||||||||||| ||||    
T  23597111 gtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 166 - 290
Target Start/End: Original strand, 44548347 - 44548471
Alignment:
Q  166 cattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattg 265  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||| | ||| |||||||||    
T  44548347 cattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattg 44548446  T
Q  266 ccatctaaggatgtctatgtatcat 290  Q
    ||| |||| ||||||||||||||||    
T  44548447 ccacctaaagatgtctatgtatcat 44548471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 5958918 - 5959100
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||  |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  5958918 ggaaaatgttacatagacacattttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 5959017  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  || |||| ||||| |||||||||||||||| ||  ||||||||||||  ||||| ||| |||||||||||||||    
T  5959018 gggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 113 - 297
Target Start/End: Complemental strand, 6261052 - 6260868
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||  |||||||| |||||||||| ||| | ||| ||||||||| ||||||  ||| ||||| ||||||| |||     
T  6261052 ggaaaatgttacatacacaccatttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaagaaatagaaaatgtgcttatgcg 6260953  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||||||| |||| ||| | |||||| |||||||||| | ||||||||| ||| |||||||| ||||| |||||||||||||    
T  6260952 gggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatctatcataactcat 6260868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 117 - 290
Target Start/End: Complemental strand, 26274607 - 26274437
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||||||||||||||||| || | ||| ||||||||||||||||   ||||||||||| ||||||| |||||||||| |    
T  26274607 aatgatacatagacaccctttattcccatacacccttgtgcatctcatgcattaggaagagagaa---gagagaaaagaaaaagtgtacttgtgcaggat 26274511  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    ||||||| | | |||||| |||||| ||||| ||| ||| | ||||||||||  ||||| ||||||||||||||    
T  26274510 ccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcat 26274437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 113 - 290
Target Start/End: Original strand, 11152296 - 11152472
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| ||| ||||| ||||||| |||||| |||| |||||||||| || | ||||||||||| ||||||| ||| |||||| ||||||||||     
T  11152296 ggaaaatgttatatagacaccatttattctcatacatccttctacaccccatgcactgggaagagagaagaggagaggaaaaagaaagcgtgcttgtgcg 11152395  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    ||||| || || | |||||||| |||||||||||| |||  ||||||||||||||| |||||| ||||||||| ||||    
T  11152396 gggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaagg-tgtctatgtttcat 11152472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 113 - 294
Target Start/End: Complemental strand, 44454165 - 44453980
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtac----accccatacattaggaagagagaataggagagaaaagagaaagtgtgcttg 208  Q
    ||||||||||||||||||||| |||||||  |||||||||| |||    ||||||| |||||||||||||||| | ||||| ||||| ||||||||||||    
T  44454165 ggaaaatgttacataaacaccatttattcttatacacccttatactctgaccccatgcattaggaagagagaagatgagaggaaagaaaaagtgtgcttg 44454066  T
Q  209 tgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataact 294  Q
    ||  || |||||||  |||| ||||| |||||||||||||| | ||  | ||||||||||  ||| | ||||||||||||||||||    
T  44454065 tgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcataact 44453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 113 - 297
Target Start/End: Complemental strand, 47748624 - 47748441
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||| ||||||||||||||  ||||||||||||||| || |||  ||||||||||| | |||||||     
T  47748624 ggaaaatgttacatagacaccttttaattgcatacactcttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 47748525  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    || ||||  ||||||| ||||| |||||| | |||||| | ||||||||||||||| |||||| | | |||||||||||||||||    
T  47748524 ggatccatatggccacatgtcagatttttatatgggtg-tcaagggtgtattgccacctaagggtatttatgtatcataactcat 47748441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 146 - 265
Target Start/End: Complemental strand, 13414910 - 13414791
Alignment:
Q  146 acacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgt 245  Q
    ||||||| |||||| |||| |||||||||||||||| | || |||||||||||| ||||||||||  ||||||||||| | |||||| | ||||||||||    
T  13414910 acaccctagtacactccatgcattaggaagagagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgt 13414811  T
Q  246 gggtgttaaagggtgtattg 265  Q
    |||||| |||||||||||||    
T  13414810 gggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 113 - 297
Target Start/End: Original strand, 3302451 - 3302635
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| ||||||| ||||||||  ||||||||||||||||||| ||| ||| ||||||||||| | ||||  ||| |||||||||||||||       
T  3302451 ggaaaatgttatataaacatcctttattaacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaaaagaaagtgtgcttgtatg 3302550  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    |||||||  ||   |||||||| ||||||||||||||||  | |  | ||||| || |||||||||| |||||||||| ||||||    
T  3302551 gggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattactcat 3302635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 44332289 - 44332427
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| | ||| |||| |  ||||||||||||||||| | ||  ||||||||||||||| || |||  ||||||||||| | |||||||     
T  44332289 ggaaaatgttacatagataccttttaattgcatacacccttgtacactctatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 44332388  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgt 251  Q
    |||||||   |||||| ||||| |||||| |||||||||    
T  44332389 gggtccatagggccacatgtcagatttttatgtgggtgt 44332427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 48489440 - 48489328
Alignment:
Q  155 tacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaa 254  Q
    ||||||| ||| | ||||||||||||| ||| ||||||| ||||| ||||||||||| || |||||||| |||| ||||| |||||||||||| || |      
T  48489440 tacaccctatatactaggaagagagaagaggtgagaaaatagaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatg-tcc 48489342  T
Q  255 agggtgtattgcca 268  Q
    ||||||||||||||    
T  48489341 agggtgtattgcca 48489328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 295
Target Start/End: Complemental strand, 7740897 - 7740733
Alignment:
Q  131 accctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgt 230  Q
    ||||||||||| | |||| | ||||||| ||||| ||  |||||||||||| ||||||  ||| ||||| | |  |||||  |||||||| | |||||||    
T  7740897 accctttattctcgtacatctttgtacatcccatgcaacaggaagagagaagaggagatgaaaaagaaaatatatttgtgtggggtccacatagccacgt 7740798  T
Q  231 gtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||||||| ||| ||||| || || ||||||| ||  ||||| |||| ||||||||||||||    
T  7740797 gtcatatttttatgtaggtgtcaatggatgtattgtcacataaggttgtcaatgtatcataactc 7740733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 34339968 - 34340059
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 207  Q
    ||||||||||||| ||||| ||||||  || |||| ||||||||||| || || | ||||||||||| || |||||||| ||||| |||||||    
T  34339968 aaaatgttacatagacaccttttattttca-acactcttgtacaccctatgcacttggaagagagaagagaagagaaaaaagaaactgtgctt 34340059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 7447936 - 7447990
Alignment:
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  7447936 gggtccaagttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 7447990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 170
Target Start/End: Original strand, 35003294 - 35003351
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacaccc--ttgtacaccccatacatta 170  Q
    |||||||||||||| ||||||||||| |  |||||||||  |||||||||||||||||||    
T  35003294 ggaaaatgttacatgaacaccctttaat--catacaccctattgtacaccccatacatta 35003351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 37814777 - 37814806
Alignment:
Q  112 gggaaaatgttacataaacaccctttattc 141  Q
    ||||||||||||||||||||||||||||||    
T  37814777 gggaaaatgttacataaacaccctttattc 37814806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 4401450 - 4401493
Alignment:
Q  224 gccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||    
T  4401450 gccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 4401493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 50448238 - 50448195
Alignment:
Q  224 gccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||    
T  50448238 gccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 50448195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 1e-73; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 113 - 297
Target Start/End: Original strand, 43414499 - 43414683
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  43414499 ggaaaatgttacatagacaccctttattgccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 43414598  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    || |||| ||| |||||||| | |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  43414599 ggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactcat 43414683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 4854781 - 4854963
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||| |||||||| |||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  4854781 ggaaaatgttacatagacactctttattctcatatacccttgtacatcccatacattagtaagagagaagaggagagaaaagagaaagtgtgcttgtgca 4854880  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| |||||||| | ||| |||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  4854881 gggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 113 - 296
Target Start/End: Original strand, 15048099 - 15048282
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggaga-gaaaagagaaagtgtgcttgtgc 211  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  15048099 ggaaaatgttatatagacaccctttattccgatacacccttgtacatcccatacattaggaagagagaagaggagataaaaagagaaagtgtgcttgtgc 15048198  T
Q  212 agggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
     ||||||| ||||| |||||||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  15048199 ggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactca 15048282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 117 - 288
Target Start/End: Complemental strand, 14548100 - 14547929
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  14548100 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 14548001  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatc 288  Q
    ||||||| | |||||||| |||||||||||||||| ||| |||||||||||| |||||| ||||||||||||    
T  14548000 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatc 14547929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 12831225 - 12831047
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  12831225 aatgatacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 12831126  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||    
T  12831125 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 37038661 - 37038479
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||| ||||||| ||| |||||||||||||||||     
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 37038562  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    || |||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||| |||||||||||||||| ||||    
T  37038561 ggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 117 - 297
Target Start/End: Original strand, 504043 - 504223
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| | |||||||||||||| |||||||||||| ||||    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaatgtgtgcttgtgcggggt 504142  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||| | |||||||| |||||||||||||||| ||| |||||||||||| |||||| |||||||||||||| ||||||    
T  504143 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactcat 504223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 114 - 290
Target Start/End: Complemental strand, 5958011 - 5957835
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 213  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||| || ||||||||||||| ||||||| |||||||||||||| |||||| |    
T  5958011 gaaaatgttacataaacaccctttattctcatacacccttgtacacctcatgcactaggaagagagaagaggagaggaaagagaaagtgtgattgtgcgg 5957912  T
Q  214 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    | |||||||| | |||||||| |||||||||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  5957911 gatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcat 5957835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 117 - 297
Target Start/End: Original strand, 23122519 - 23122699
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaacaggagagaaaagagaaagtgtgcttatgcggggt 23122618  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||| | |||||||| |||||||||||||||| ||| ||||||||||||  ||||| |||||||||||||| ||||||    
T  23122619 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattactcat 23122699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 117 - 297
Target Start/End: Original strand, 34012218 - 34012398
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |    
T  34012218 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 34012317  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||| ||| |||||| |||||||||||||| ||||||    
T  34012318 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcat 34012398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 117 - 297
Target Start/End: Complemental strand, 15197511 - 15197331
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||  |||||||||||||||||||||||||| ||| |||| |||||||| || ||||||||||||||||||||||||||||| ||||    
T  15197511 aatgatacatagacactttttattcccatacacccttgtacacctcatgcatttggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 15197412  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||  |||||||||||||| ||||||    
T  15197411 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcat 15197331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 116 - 296
Target Start/End: Original strand, 40423864 - 40424044
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    ||||| |||||| ||||| |||||||||||||||||||||||||| |||  ||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  40423864 aaatgatacatagacaccttttattcccatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggg 40423963  T
Q  216 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||| || | |||||||| |||||||||||| ||| |||||||||||||||| |||||| | |||||||||||| |||||    
T  40423964 tccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattactca 40424044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 110 - 295
Target Start/End: Original strand, 10284546 - 10284731
Alignment:
Q  110 ttgggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    |||||||||||||||||| ||||| |||||||  ||||| ||||||||||||||| || ||||||||||||| | || || |||||||||||||||||||    
T  10284546 ttgggaaaatgttacatagacaccttttattcttatacaaccttgtacaccccatgcactaggaagagagaagatgaaaggaaagagaaagtgtgcttgt 10284645  T
Q  210 gcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    || ||||||||||| | |||||||| |||||||||||||||| |||| |||||||| ||  ||||| |||||||||||||||||||    
T  10284646 gcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 44507027 - 44507187
Alignment:
Q  135 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtca 234  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||||| | ||||||||||| | ||||||||    
T  44507027 tttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtca 44507126  T
Q  235 tatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     ||||||||||||||||||||| ||||||| ||| |||||| |||||||||||||| ||||    
T  44507127 gatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 133 - 295
Target Start/End: Original strand, 1179878 - 1180040
Alignment:
Q  133 cctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgt 232  Q
    |||||||||||||| | ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |  ||||| || | ||||||    
T  1179878 cctttattcccatatatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgt 1179977  T
Q  233 catatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    || |||||||||||||||| |||||||||||| ||| |||||| |||||||||||||| ||||    
T  1179978 cagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 113 - 275
Target Start/End: Original strand, 8841350 - 8841512
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| ||||||| |||||||||||||| || |||||| |||||| ||||||| |||||||||||||||||||||     
T  8841350 ggaaaatgttacatagacaccatttattctcatacactcttgtacaccccatgcactaggaaaagagaagaggagaggaaagagaaagtgtgcttgtgcg 8841449  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaagg 275  Q
    ||||||||||| | |||||| | |||||||||||||||| |||||||||| ||||| ||||||    
T  8841450 gggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 155 - 293
Target Start/End: Original strand, 10621047 - 10621185
Alignment:
Q  155 tacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaa 254  Q
    |||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| || || | ||||| |||||||| |||||||||||||||| ||    
T  10621047 tacatcccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaa 10621146  T
Q  255 agggtgtattgccatctaaggatgtctatgtatcataac 293  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  10621147 agggtgtattaccacctaaggatgtctatgtatcataac 10621185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 15258847 - 15259029
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||| ||||||||  ||||||| || |||   ||||||||||||| ||||||| ||||||||| ||||||||||||    
T  15258847 ggaaaatgttacatagacaccctttatttccatacacttttgtacatcctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgca 15258946  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||||||| |||| ||||| |||||| ||||| |||  | || ||||||||||||||||  | |||||||||||||||||    
T  15258947 gggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataactc 15259029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 34307394 - 34307216
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    ||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| ||||||| ||||    
T  34307394 aatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 34307295  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     ||  || |||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  34307294 tcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 116 - 295
Target Start/End: Original strand, 16056322 - 16056501
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    |||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| ||||||| |||    
T  16056322 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 16056421  T
Q  216 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||  ||||||| ||||| |||||||||||||||| || || ||||||| ||  ||||||||| |||||||||||||||    
T  16056422 tccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactc 16056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 117 - 251
Target Start/End: Complemental strand, 9122363 - 9122229
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||  |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |    
T  9122363 aatgatacatagacattctttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 9122264  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgt 251  Q
    ||||||| | || ||||| ||||||||||||||||    
T  9122263 ccacgtgactacatgtcagatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 24307715 - 24307893
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    ||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| ||||||| ||||    
T  24307715 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 24307814  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||  ||||||| | ||| |||||||||||||||| || || |||||||||| |||||| ||| |||||||||||||||    
T  24307815 ccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 24307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 151 - 295
Target Start/End: Complemental strand, 16383521 - 16383377
Alignment:
Q  151 cttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtg 250  Q
    ||||||||||||||  ||||||||||||||| || |||  ||||||||||||| ||||||| |||||||  ||||||| ||||| |||||||||||||||    
T  16383521 cttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtg 16383422  T
Q  251 ttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    | || ||||||||||||| |||||| ||| |||||||||||||||    
T  16383421 tcaaggggtgtattgccacctaagggtgtttatgtatcataactc 16383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 30479396 - 30479574
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    ||||||||||| ||||| |||| |  |||||||||||||||||| |||  ||||||||||||||| || |||  ||||||||||||| |||||||  |||    
T  30479396 aatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgaggt 30479495  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||  | ||||| ||||| |||||| ||||| ||| |||||||||||||||| |||||| ||| |||||||||||||||    
T  30479496 ccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 32032906 - 32032725
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||||||||||||||| |||  ||||||||||||||| || ||   ||||||||||||| ||||||||    
T  32032906 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaaggagaaagagaaagtgtacttgtgca 32032807  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    || ||||  ||||||| ||||| |||||||||||| || | |||| |||||||||| |||||| ||| |||||||||||||||    
T  32032806 ggatccatatggccacatgtcagatttttgtgtggatg-tcaaggatgtattgccacctaagggtgtttatgtatcataactc 32032725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 202
Target Start/End: Original strand, 42710228 - 42710301
Alignment:
Q  129 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42710228 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtg 42710301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 42221697 - 42221515
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| ||||||| ||||||||  ||||||||||||||||||| ||| ||| ||||||||||| | ||||  |||||||||||||||||||       
T  42221697 ggaaaatgttatataaacatcctttatttacatacacccttgtacaccctatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtatg 42221598  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  ||   |||||||| ||||||||||||||||  | |  ||||||| || |||||||||| |||||||||| ||||    
T  42221597 gggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 169 - 297
Target Start/End: Original strand, 20074916 - 20075036
Alignment:
Q  169 taggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||||||||| || |||| |||||||||||||||||||||||||||||||||        ||| |||||| ||||||||| |||| |||||||||||    
T  20074916 taggaagagagaagagaagaggaaagagaaagtgtgcttgtgcagggtccacgtg--------tcacatttttatgtgggtgtcaaagagtgtattgcca 20075007  T
Q  269 tctaaggatgtctatgtatcataactcat 297  Q
     ||||||||||||||||||||| ||||||    
T  20075008 cctaaggatgtctatgtatcattactcat 20075036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 114 - 295
Target Start/End: Complemental strand, 25838370 - 25838197
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 213  Q
    |||||||||||||| | | |||||||| ||||||| |||||||||||| ||||||||| || |||||| ||||||||||||| ||||||||||||| | |    
T  25838370 gaaaatgttacatagatatcctttattgccatacaaccttgtacaccctatacattagcaaaagagaagaggagagaaaagaaaaagtgtgcttgtacgg 25838271  T
Q  214 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     ||||| ||| | |||||        |||||||| ||| |||  ||||||||||| |||||||| ||||| |||||||||||    
T  25838270 agtccatgtgacaacgtg--------ttgtgtggatgtcaaaaagtgtattgccacctaaggatatctatttatcataactc 25838197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 115 - 295
Target Start/End: Complemental strand, 17444005 - 17443825
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||| |||||||||||    ||||| ||||||||| | ||| || | ||||||||||| || |||  |||||||||||||  |||||  ||    
T  17444005 aaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactgggaagagagaagagaagatgaaagagaaagtgtctttgtgtggg 17443906  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||| || | || ||||| ||||||||||| |||||||   |||||||| || |||||| |||||||||||||||||||    
T  17443905 gtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 40467882 - 40467755
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||| |||||| |   |||||||||||||| | ||||||||||||| | ||||| |||||||||||||||||||||     
T  40467882 ggaaaatgttacatagacaccttttatccccataaatttttgtacaccccatagactaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcg 40467783  T
Q  213 gggtccacgtggccacgtgtcatatttt 240  Q
      |||||||||| ||| ||||| |||||    
T  40467782 aagtccacgtggtcacatgtcagatttt 40467755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 42354506 - 42354600
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 207  Q
    ||||||||||||||| ||||| ||||||| ||||||||||| |||||||||| || ||||||||||||| || |||  |||||||||||||||||    
T  42354506 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgctt 42354600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 32707921 - 32708061
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtg--cttgtg 210  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||||  ||||||    
T  32707921 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtgtacttgtg 32708020  T
Q  211 cagggtccacgtggccacgtgtcatatttttgtgtgggtgt 251  Q
    | |||||||  | ||||| | ||| |||||||| |||||||    
T  32708021 cggggtccatatagccacatctcagatttttgtatgggtgt 32708061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 135 - 295
Target Start/End: Original strand, 14055532 - 14055692
Alignment:
Q  135 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg-tccacgtggccacgtgtc 233  Q
    ||||||| |||||||| ||||| ||| ||| ||||| |||||||||| |  |||| ||||| |||||| ||||||| |||| |||||||| | || |||     
T  14055532 tttattctcatacacctttgtatacctcattcattaagaagagagaagatcagaggaaagaaaaagtg-gcttgtgtaggggtccacgtgactacatgta 14055630  T
Q  234 atatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    | |||||||||||| ||| || | |||||||| || |||||| |||| ||||||||||||||    
T  14055631 agatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 295
Target Start/End: Complemental strand, 24307702 - 24307629
Alignment:
Q  222 tggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | ||| |||||||||||||||| || || |||||||||| |||||| ||| |||||||||||||||    
T  24307702 tggccacatatcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactc 24307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 297
Target Start/End: Complemental strand, 38229547 - 38229427
Alignment:
Q  176 agagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaagg 275  Q
    |||||| || |||| ||||||||| ||||||||| |||  |||||||| |||| ||||| |||||||||||||||| |  | | ||||||||| |||||     
T  38229547 agagaagagaagaggaaagagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtcag-gagcgtattgccacctaaga 38229449  T
Q  276 atgtctatgtatcataactcat 297  Q
     |||  ||||||||||||||||    
T  38229448 gtgttcatgtatcataactcat 38229427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 29705466 - 29705527
Alignment:
Q  206 ttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    |||||| ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  29705466 ttgtgcggggtccaagttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 29705527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 207
Target Start/End: Original strand, 30183794 - 30183887
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctt 207  Q
    ||||||||||| ||| ||| ||||||||  ||||||| ||||||||||||||| ||| |||||| |||| | || |  |||||||||||||||||    
T  30183794 ggaaaatgttagatagacatcctttatttacatacactcttgtacaccccatatatttggaagaaagaagatga-atgaaagagaaagtgtgctt 30183887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 2547118 - 2547161
Alignment:
Q  224 gccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||    
T  2547118 gccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 2547161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 42197413 - 42197370
Alignment:
Q  224 gccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||    
T  42197413 gccacgtgtcaaaattttgtgtgggtg-taaagggtgtattgcca 42197370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 139; Significance: 2e-72; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 31976430 - 31976248
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  31976430 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 31976331  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||| || ||| |||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  31976330 gggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 117 - 297
Target Start/End: Complemental strand, 32869856 - 32869676
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  32869856 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32869757  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||| | ||||||    
T  32869756 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctttactcat 32869676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 31110679 - 31110859
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  31110679 ggaaaatgttacatagacatcctttatttccatacacctttgtacaccccatacattaggaagagagaagagtagagaaaagagaaagtgtgcttgtgca 31110778  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| ||||  |||||||| |||||  |||| |||| |||||||||||||||| ||||||||||||||||||||||||||    
T  31110779 gggtccatgtggttacgtgtcagatttt--tgtgagtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 117 - 290
Target Start/End: Original strand, 22880580 - 22880753
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  22880580 aatgatacatatacaccatttattcccatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 22880679  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    ||||||| | |||||||| | |||||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  22880680 ccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 22880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 117 - 297
Target Start/End: Complemental strand, 17598732 - 17598552
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  17598732 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 17598633  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||| | |||||||| |||||||||||||||| ||| | |||||||||| |||||| |||||||||||||| ||||||    
T  17598632 ccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattactcat 17598552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 29858005 - 29857827
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||| || |    
T  29858005 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 29857906  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||  | |||||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  29857905 ccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 11427796 - 11427616
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |    
T  11427796 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 11427697  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatcta--aggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| ||||| |||||||||| |||  ||| |||||||||||||| ||||    
T  11427696 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcattactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 15989960 - 15990142
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  15989960 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 15990059  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  15990060 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 30341278 - 30341460
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  30341278 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 30341377  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  30341378 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 113 - 296
Target Start/End: Original strand, 15507942 - 15508125
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||| |||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  15507942 ggaaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 15508041  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    |||||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| ||||||||||||||||    
T  15508042 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactca 15508125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 113 - 296
Target Start/End: Complemental strand, 4231730 - 4231547
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  4231730 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 4231631  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    |||||||  ||||||||||||| |||||||||||||||  || ||||||||||||| |||| ||||| |||| |||||||||||    
T  4231630 gggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactca 4231547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 6209388 - 6209565
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| | ||||||||||||| |||| | ||||||| ||||| |||||||||||||||| |||||||||||||||||||||||| |||| ||||    
T  6209388 aatgatacatagataccctttattccc-tacatctttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagtgcggggt 6209486  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | ||||| || ||||||||||| |||| |||  ||||||||||| |||||| |||||||||||||| ||||    
T  6209487 ccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 129 - 295
Target Start/End: Complemental strand, 15832743 - 15832577
Alignment:
Q  129 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccac 228  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||| |||| |||||| |||||||||| |||  ||||||||| |||||||| | ||    
T  15832743 acaccctttattccaatacacccttgtacaccccatgcattaggaagatagaagaggagaaaaaagagaaaatgtatttgtgcaggatccacgtgactac 15832644  T
Q  229 gtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||| |||||||||||||||| ||| | | ||||| || |||| | |||||||||||||| ||||    
T  15832643 gtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactc 15832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 113 - 299
Target Start/End: Original strand, 31952948 - 31953134
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||| || ||||||||||||| || |||  |||||||||||||| |||||      
T  31952948 ggaaaatgttacatagacaccatttattctcatacatccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgtttgtgtg 31953047  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcatgt 299  Q
     ||||||| ||  ||| ||||| |||||| ||||||||| || ||||||||||||| |||||||||||||| |||||| ||||||||    
T  31953048 aggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactcatgt 31953134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 146 - 296
Target Start/End: Original strand, 31109351 - 31109501
Alignment:
Q  146 acacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgt 245  Q
    ||||||||||| ||||||| ||||||||||||| || ||||||||||||||||||||| ||| ||| ||||| ||||| | |||||||| ||||||||||    
T  31109351 acacccttgtataccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgt 31109450  T
Q  246 gggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    || ||| |||||||||||||||| |||||| |||||||  ||||| |||||    
T  31109451 ggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactca 31109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 135 - 264
Target Start/End: Original strand, 23128067 - 23128196
Alignment:
Q  135 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtca 234  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||| || ||||||||||||||||||||||||||||  || |||||||| | ||||||||    
T  23128067 tttatttccatacacccttgtacatcccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtca 23128166  T
Q  235 tatttttgtgtgggtgttaaagggtgtatt 264  Q
     |||||||||||||||| ||||| ||||||    
T  23128167 gatttttgtgtgggtgtcaaaggatgtatt 23128196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 115 - 290
Target Start/End: Original strand, 28536408 - 28536581
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||  ||| | ||||||  |||||||||||||||||||||| || ||||||||| ||| || ||| |||||||||||||||||||||  ||    
T  28536408 aaaatgttacatcgacatcatttattttcatacacccttgtacaccccatgcagtaggaagagggaagagaagataaaagagaaagtgtgcttgtgtggg 28536507  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    |||||| || |  ||||||| |||||||||||||||| || || |||||||||| |||||||||| ||||||||||    
T  28536508 gtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcat 28536581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 115 - 297
Target Start/End: Complemental strand, 30870193 - 30870018
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||| ||| ||||||||||||  |||||||| |||||||||| ||| | ||| ||||||||| ||||||| ||||||||| ||||||||||| ||    
T  30870193 aaaatgtta-atagacaccctttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcggg 30870095  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||| ||| |||| ||| | |||||| | ||||||||      ||| || |||||||||||| ||| |||||||||||||||    
T  30870094 gtccatgtgaccacatgttagatttttatatgggtgtt------tgttttaccatctaaggatatctgtgtatcataactcat 30870018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 151 - 288
Target Start/End: Complemental strand, 946520 - 946383
Alignment:
Q  151 cttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtg 250  Q
    |||||||| | ||| |||||||||||||||| |||||||||||||||||||||||| | || || |  ||||| | | |||||| ||||||| || ||||    
T  946520 cttgtacatctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtg 946421  T
Q  251 ttaaagggtgtattgccatctaaggatgtctatgtatc 288  Q
    | ||||||||||||  || |||||||||||||||||||    
T  946420 tcaaagggtgtattatcacctaaggatgtctatgtatc 946383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 291
Target Start/End: Original strand, 9379660 - 9379808
Alignment:
Q  143 catacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttg 242  Q
    |||||| ||||||| |||  || ||||||||||||| || || |||  ||||||||| |||| |||||   | ||||| ||||||||||||| |||||||    
T  9379660 catacatccttgtataccttatgcattaggaagagaaaagagaagatgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttg 9379759  T
Q  243 tgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcata 291  Q
    | ||||||| || || ||||||| |||||||||||||||||||||||||    
T  9379760 tatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcata 9379808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 295
Target Start/End: Complemental strand, 12732604 - 12732482
Alignment:
Q  173 aagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatcta 272  Q
    ||||||||| ||||||  ||||||||| ||||||| ||  || ||||| | ||||||||||| |||||||||||||||| || |  | ||||||||  ||    
T  12732604 aagagagaagaggagatgaaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccactta 12732505  T
Q  273 aggatgtctatgtatcataactc 295  Q
    || ||||||||||||||| ||||    
T  12732504 agaatgtctatgtatcattactc 12732482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 22421997 - 22422043
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacac 159  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||    
T  22421997 ggaaaatgttacatagacaccatttattctcatacacccttgtacac 22422043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 26466799 - 26466850
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccat 164  Q
    |||||||||||||||||||||||||||||| | || || |||||||| ||||    
T  26466799 ggaaaatgttacataaacaccctttattcctacaccccattgtacactccat 26466850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 26669996 - 26669944
Alignment:
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  26669996 gtccaggttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 26669944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 3213400 - 3213428
Alignment:
Q  113 ggaaaatgttacataaacaccctttattc 141  Q
    |||||||||||||||||||||||||||||    
T  3213400 ggaaaatgttacataaacaccctttattc 3213428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 7367671 - 7367714
Alignment:
Q  224 gccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||||||| | ||||||||||||| |||||||||||||||||    
T  7367671 gccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 7367714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 21293777 - 21293749
Alignment:
Q  113 ggaaaatgttacataaacaccctttattc 141  Q
    |||||||||||||||||||||||||||||    
T  21293777 ggaaaatgttacataaacaccctttattc 21293749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 6e-72; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 113 - 294
Target Start/End: Complemental strand, 35523058 - 35522877
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||     
T  35523058 ggaaaatgttacataaacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcg 35522959  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataact 294  Q
    || ||||  ||||||||||||| |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  35522958 ggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcataact 35522877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 117 - 299
Target Start/End: Complemental strand, 19330020 - 19329838
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  19330020 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 19329921  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcatgt 299  Q
    |||||||   |||||||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  19329920 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactcatgt 19329838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 8080305 - 8080483
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  8080305 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 8080404  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||| ||| ||||| |||||||||||||||| |||||| |||||||||||||| ||||    
T  8080405 ccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 113 - 297
Target Start/End: Complemental strand, 31736059 - 31735882
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||     
T  31736059 ggaaaatgttagatagataccttttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 31735960  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    || |||| |||||||||||       |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  31735959 ggatccatgtggccacgtg-------tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactcat 31735882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 38837395 - 38837217
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  38837395 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 38837296  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||| |||||  ||||||||||||||| |||||| |||||||||||||| ||||    
T  38837295 ccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 46033719 - 46033901
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||     
T  46033719 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaatagagaagaggagagaaaagagaaaatatgcttgtgcg 46033818  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    | || || ||| |||||||||| |||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||    
T  46033819 gagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 113 - 297
Target Start/End: Complemental strand, 21234583 - 21234399
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| |||||||| |||||||||||||||||||||||||||| | |||||||  |||||||| |||||||||||     
T  21234583 ggaaaatgttacatagacaccttttattctcatacaccattgtacaccccatacattaggaagagaggaaaggagaggtaagagaaaatgtgcttgtgcg 21234484  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    |||| || ||||| |||||||| ||||||||||| |||| ||||||||||||| || ||||||||||||||||||||||||||||    
T  21234483 gggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactcat 21234399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 4999436 - 4999614
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||| |||||| ||||    
T  4999436 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagataaaagagaaagtgtgtttgtgcggggt 4999535  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||| ||| |||||||||||||||| ||| ||||||||||||||||||| |||||||||||||| ||||    
T  4999536 ccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 7389566 - 7389389
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||| |||||||||||||||||||| |||||||||||  |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  7389566 aatgatacatagacatcctttattcccatacaccct-gtacaccccatgtattaggaagagagagtaggagagaaaagagaaagtgtgcttgtgcggggt 7389468  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| |||| ||||||||||| |||||| |||||||||||||| ||||    
T  7389467 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 117 - 290
Target Start/End: Original strand, 32951415 - 32951588
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||| |||||| ||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  32951415 aatgatacatagacaccccttattctcatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32951514  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    ||||||| | |||||| | |||||||||||| ||||||||| ||||||| ||||||||  ||||||||||||||    
T  32951515 ccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcat 32951588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 26296826 - 26296644
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    |||||||||||| || ||||| | |||| ||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| || ||||||||     
T  26296826 ggaaaatgttacgtagacaccatatatttccatacacccttgtacacctcatacattaagaagagagaagaggagagaaaagagaaaatgcgcttgtgcg 26296727  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  ||||||||| ||| |||||| ||||| ||||||||||| ||||| || ||||||||||||||||||||||||||    
T  26296726 gggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 122 - 295
Target Start/End: Original strand, 19436114 - 19436287
Alignment:
Q  122 tacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacg 221  Q
    |||||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||| || || |||||||||||||||||||||| ||| || ||||||    
T  19436114 tacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagaaaagagaagagaaaagagaaagtgtgcttatgcgggatccacg 19436213  T
Q  222 tggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    || | |||||||| |||||||||||||||| ||| ||||||||| || ||||||||||||||||||||| ||||    
T  19436214 tgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 143 - 297
Target Start/End: Complemental strand, 35137685 - 35137531
Alignment:
Q  143 catacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttg 242  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||| | |||||| | |||||||    
T  35137685 catacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttg 35137586  T
Q  243 tgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||||| |||||||||||||||| |||||| ||||||| |||||| ||||||    
T  35137585 tgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcattactcat 35137531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 133 - 290
Target Start/End: Complemental strand, 3784157 - 3784000
Alignment:
Q  133 cctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgt 232  Q
    ||||||||| ||||||  |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |||||||| | ||||||    
T  3784157 cctttattcacatacattcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgt 3784058  T
Q  233 catatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    || |||||||||||||||| ||| | |||||||||| |||||| ||||||||||||||    
T  3784057 cagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcat 3784000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 135 - 296
Target Start/End: Complemental strand, 38267200 - 38267039
Alignment:
Q  135 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtca 234  Q
    |||||| ||||||||| | ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | ||||||||    
T  38267200 tttatttccatacaccttcgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtca 38267101  T
Q  235 tatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
     |||||||||||||||| ||||||||||||| ||  ||||| |||||||||||||| |||||    
T  38267100 gatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcattactca 38267039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 40957885 - 40957707
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||| |||||  |||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| | || |    
T  40957885 aatgatacatagacacccattattttcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacgggat 40957786  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||| | |||| ||||||||||| |||||  |||||||||||||| ||||    
T  40957785 ccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 115 - 295
Target Start/End: Complemental strand, 41915921 - 41915741
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| ||||||| ||    
T  41915921 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 41915822  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||  ||||||| ||||| |||||||||| ||||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  41915821 gtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 3434730 - 3434562
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||          |||||||||||||||||||| || |    
T  3434730 aatgatacatagacaccctttattcccatacagccttgtacaccccatgcattaggaagagagaa----------aagagaaagtgtgcttgtgcgggat 3434641  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | ||||||||  ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  3434640 ccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 113 - 296
Target Start/End: Complemental strand, 41423864 - 41423681
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||| || ||||||||||||| ||||||  ||||||||| | ||||||| |     
T  41423864 ggaaaatgttacataaacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagaggagatgaaagagaaaatatgcttgtacg 41423765  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    || || ||||| |||| ||||| ||||||||||  |||| ||  |||||||| |||||||| ||||||||||||||||||||||    
T  41423764 ggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcataactca 41423681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 22343543 - 22343361
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||||||||||||||| |||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  22343543 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 22343444  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  ||| ||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  22343443 gggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 142 - 290
Target Start/End: Complemental strand, 3694520 - 3694372
Alignment:
Q  142 ccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatattttt 241  Q
    |||||||| |||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| || ||||| || | |||||||| ||||||    
T  3694520 ccatacactcttgtacaccccatgcattgggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagattttt 3694421  T
Q  242 gtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    |||||||||||||| ||||||||| || |||||| ||| ||| ||||||    
T  3694420 gtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcat 3694372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 46374742 - 46374902
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||                      |||||||||||     
T  46374742 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagaga----------------------tgtgcttgtgcg 46374819  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  46374820 gggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 35468773 - 35468955
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| |||||| |||| |||| | |||  | ||||||||||||| |||| || |||||||||||||| |||||||    
T  35468773 ggaaaatgttacatatacaccttttattctcatacatccttatacatctcatgaactaggaagagagaagaggataggaaagagaaagtgtgtttgtgca 35468872  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||| ||| ||| | | | |||||| ||||||||| ||| | |||||||||||||||||||||||||||||||| ||||    
T  35468873 gggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactc 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 38044379 - 38044197
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  |||||||||||| || || |||  ||||||||||||| |||||||     
T  38044379 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagaaaagagaagaagaaagagaaagtgtacttgtgcg 38044280  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  |||| || ||||| |||||||||||| ||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  38044279 gggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 113 - 297
Target Start/End: Complemental strand, 8238395 - 8238210
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| || || |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  8238395 ggaaaatgttacatagacgccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 8238296  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatcta-aggatgtctatgtatcataactcat 297  Q
    |||||||  || | || ||||| |||||||||||||||| |||||||||||||||| ||| ||| ||| |||||||||||||||||    
T  8238295 gggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactcat 8238210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 115 - 295
Target Start/End: Complemental strand, 18207359 - 18207180
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||| ||| | ||||||||||  ||||||||||||||||| | || || ||||||||||||| ||||||  ||||||||||||||||||||  ||    
T  18207359 aaaatgttagatagataccctttattatcatacacccttgtacactctatccactaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtggg 18207260  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    || ||||| ||||||||| | |||||||| ||||||| ||  |||||||||||| |||||| |||||||||||||||||||    
T  18207259 gttcacgt-gccacgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 114 - 265
Target Start/End: Original strand, 16374743 - 16374894
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 213  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||||||||||||||| | ||||  |||||||| |||||||||||       
T  16374743 gaaaatgttacatagacaccctttattctcatacacctttgtacactccatacattaggaagagagaaaaagagatgaaagagaatgtgtgcttgtgtga 16374842  T
Q  214 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattg 265  Q
    | |||||||| |||||||||| |||||||||||| ||| || || |||||||    
T  16374843 gatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattg 16374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 143 - 296
Target Start/End: Original strand, 32564374 - 32564527
Alignment:
Q  143 catacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttg 242  Q
    |||||||||||||||||| |||  ||||||||||||||| || |||  |||||||||||||  |||||| |||||||  | ||||| ||||| |||||||    
T  32564374 catacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttg 32564473  T
Q  243 tgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||||||| || ||||||||||||| ||||| |||| ||||||||||||||||    
T  32564474 tgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactca 32564527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 115 - 296
Target Start/End: Original strand, 39255844 - 39256024
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||  | || ||   ||||||||||| ||||||  ||||||||||||| ||||||  |     
T  39255844 aaaatgttacatagacaccctttattatcatacacccttgtacattctatccaccgggaagagagaagaggagatgaaagagaaagtgttcttgtgtgga 39255943  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||||||| |||||||||| |||||||| ||||| | ||  |||||||||||| |||||| ||||||||||||||||||||    
T  39255944 gtccacgtg-ccacgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactca 39256024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 113 - 261
Target Start/End: Original strand, 27744227 - 27744375
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| ||||||||| |||||||||||| | ||||||||| ||||| || ||||||||||||| ||||||| | ||||||| ||||||| ||      
T  27744227 ggaaaatgttatataaacaccatttattcccatatatccttgtacatcccatgcactaggaagagagaagaggagaggatagagaaaatgtgcttatgag 27744326  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgt 261  Q
    || ||||||||||||| ||||| |||||||||||||| | |||||||||    
T  27744327 ggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 36208299 - 36208173
Alignment:
Q  169 taggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||| |||||  ||||||||||||||| || |  |||||| |||    
T  36208299 taggaagagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattacca 36208200  T
Q  269 tctaaggatgtctatgtatcataactc 295  Q
     |||||| |||||||||||||||||||    
T  36208199 cctaagggtgtctatgtatcataactc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 186 - 295
Target Start/End: Original strand, 36361904 - 36362013
Alignment:
Q  186 agagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgt 285  Q
    |||||||||||||||||||||||||  ||||||||||| | |||||||| |||||||||||||||| ||||| |||||||||| |||||| |||||||||    
T  36361904 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgt 36362003  T
Q  286 atcataactc 295  Q
    ||||| ||||    
T  36362004 atcattactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 36362192 - 36362026
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||||||||||||||| |||||  ||||||||||||            ||||||||||||||||||||  ||||    
T  36362192 aatgatacatagacaccctttattctcatacacccttgtacatcccatgtattaggaagaga------------aaagagaaagtgtgcttgtgtggggt 36362105  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| ||||| |||||| ||| |||||| |||||||||||||| ||||    
T  36362104 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 115 - 295
Target Start/End: Complemental strand, 7728086 - 7727906
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||| ||||| |||| |  |||||| |||||||||||||||| ||||||||||||||| || |||  ||| ||||||||| ||||||| ||    
T  7728086 aaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaacagaaagtgtacttgtgcggg 7727987  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||  || |||| ||||| |||||| ||||  ||| ||  |||||||| ||| |||||| ||| |||||||||||||||    
T  7727986 gtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataactc 7727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 11044356 - 11044188
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||| |||||||  |||||||| ||||||||| ||| |||||||||||||||| | ||||| ||||||||||||| ||||||| ||||    
T  11044356 aatgatacatagacactctttattttcatacacctttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtacttgtgcggggt 11044257  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | ||||||||           |||||| ||||| |||||||||| |||||| |||||||||||||| ||||    
T  11044256 ccacgtgactacgtgtca----------ggggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactc 11044188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 40846031 - 40846213
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| | ||| |||| |  |||||||||||||||| | |||   |||||||||||||| || |||  |||||||||||||  ||||||     
T  40846031 ggaaaatgttacatagataccttttaattgcatacacccttgtacatctcatcttttaggaagagagaagagaagaagaaagagaaagtgtatttgtgcg 40846130  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  |  | || ||| | |||||||||||| ||| || ||||||||||||| |||||||||| |||||||||||||||    
T  40846131 gggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 12311086 - 12310906
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||| |   || | ||||||||||||| |||| || ||||| ||| ||||||||| ||    
T  12311086 ggaaaatgttacatagacaccctttatttccatacacctttgtacatcttgtatactaggaagagagaagaggaaaggaaagataaaatgtgcttgttca 12310987  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    || |||||||| |||| ||||| |||||||| ||| | |  |  | | |||| ||| |||||| |||||||||||||||||||    
T  12310986 ggatccacgtgaccacatgtcagatttttgtatggatatcca--gatatatttccacctaagggtgtctatgtatcataactc 12310906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 290
Target Start/End: Original strand, 2318160 - 2318338
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattag-ga-agagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||| |||| ||||||| ||||||||| |||||||| |||| |||||| || |||||||| | ||||  ||||||||||| ||||| ||     
T  2318160 gaaaatgttacatagacacactttatttccatacacctttgtacactccatgcattagagagagagagaagatgagatgaaagagaaagtatgcttatgt 2318259  T
Q  212 agggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
     ||||||||||| ||||  |||| |||||||||||||||| ||  ||||| |||||| ||| || |||  |||||||||    
T  2318260 cgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 10343531 - 10343663
Alignment:
Q  163 atacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgta 262  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||| | ||||| |||||||    || |||||| |||||||||||||||| ||   |||||    
T  10343531 atacactaggaagagagaagaggagaggaaagagaaagtgtgcgtctgcagagtccacggaaacatgtgtcagatttttgtgtgggtgtcaagatgtgta 10343630  T
Q  263 ttgccatctaaggatgtctatgtatcataactc 295  Q
    || ||| |||||| |||||||||||||| ||||    
T  10343631 tttccacctaagggtgtctatgtatcattactc 10343663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 209
Target Start/End: Original strand, 1766702 - 1766795
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 209  Q
    |||||||||||| |||| |||| ||| |||| || |||||| ||| |||| | || |||||||||| ||||||| |||||||||||||||||||    
T  1766702 aaatgttacatagacacactttgttctcatatactcttgtatacctcatatactacgaagagagaagaggagaggaaagagaaagtgtgcttgt 1766795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 295
Target Start/End: Complemental strand, 45223222 - 45223042
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||| ||||| ||| ||||||||  |||||| | |||||||||||||| ||| | ||||||||| | ||||  ||||||||| || ||||||    |    
T  45223222 aaaatgtcacatagacatcctttatttacatacatctttgtacaccccatatatttgaaagagagaagatgagatgaaagagaaaatgcgcttgtatgag 45223123  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||  |  ||   |||||||| |||||||||| | |||| |||  |||||||||| |||||||||| ||| |||||| ||||    
T  45223122 gttaatatgattacgtgtcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgtatatatatcattactc 45223042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 268
Target Start/End: Complemental strand, 32029806 - 32029752
Alignment:
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  32029806 gggtccaagttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 32029752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 251
Target Start/End: Complemental strand, 32046018 - 32045881
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 213  Q
    |||||||||||||| |||  |||||||  |||||||||||||||| | |||| ||| | ||||||||| | ||||  ||| ||||||| |||| ||   |    
T  32046018 gaaaatgttacatagacattctttatttacatacacccttgtacatctcatatatttgaaagagagaagatgagatgaaaaagaaagtatgctagtatgg 32045919  T
Q  214 ggtccacgtggccacgtgtcatatttttgtgtgggtgt 251  Q
    |||| |  |||  |||||||| |||||| |||||||||    
T  32045918 ggtctatatggttacgtgtcagatttttatgtgggtgt 32045881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 36361847 - 36361888
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtaca 158  Q
    |||| |||||| ||||||||||||| ||||||||||||||||    
T  36361847 aatgatacatagacaccctttattctcatacacccttgtaca 36361888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 136; Significance: 1e-70; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 112 - 295
Target Start/End: Original strand, 15409527 - 15409710
Alignment:
Q  112 gggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgc 211  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  15409527 gggaaaatgttacataaacaccctttattcgcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagagagtgtgcttgtgc 15409626  T
Q  212 agggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     ||||||| ||||| |||||||| |||||||||||||||| ||||  ||||||| || ||||||||||||||||||||||||||    
T  15409627 ggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 113 - 296
Target Start/End: Complemental strand, 26720698 - 26720515
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| ||| ||| | ||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||     
T  26720698 ggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtgcg 26720599  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    || |||| |||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26720598 ggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactca 26720515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 113 - 296
Target Start/End: Complemental strand, 26990447 - 26990264
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| ||| ||| | ||||||| |||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||     
T  26990447 ggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtgcg 26990348  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    || |||| |||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26990347 ggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactca 26990264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 2740452 - 2740274
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||||||||||||||||||||| || |    
T  2740452 aatgatacatagacaccctttattcccatacacccttgtacatcccatgcattaggaagagagaaggggagagaaaagagaaagtgtgcttgtgcgggat 2740353  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  2740352 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 117 - 297
Target Start/End: Original strand, 33149560 - 33149740
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |    
T  33149560 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 33149659  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||| ||| |||||| |||||||||||||| ||||||    
T  33149660 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcat 33149740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 117 - 297
Target Start/End: Complemental strand, 40145585 - 40145405
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||| ||||||||||||| | | |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  40145585 aatgatacatagacaccctttattctcatatacccttgtacacctcgtgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 40145486  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||| | |||||||| |||||||||||| |||||||||||||||||||| |||||| |||||||||||||| ||||||    
T  40145485 ccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcattactcat 40145405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 129 - 295
Target Start/End: Original strand, 36732876 - 36733042
Alignment:
Q  129 acaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccac 228  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | |     
T  36732876 acaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactat 36732975  T
Q  229 gtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||| |||||||||||||||| |||||||||||||| | |||||| |||||||||||||| ||||    
T  36732976 gtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 114 - 295
Target Start/End: Complemental strand, 6679879 - 6679698
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 213  Q
    |||||||||||||| ||| | ||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||| |||||| |    
T  6679879 gaaaatgttacatagacatcatttattgtcatacacccttgtacaccctatacattaggaagagagaagaggagagaaaagagaaaatgtgtttgtgcgg 6679780  T
Q  214 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||| ||| |||||||||| |||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||    
T  6679779 ggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 117 - 290
Target Start/End: Original strand, 18520806 - 18520979
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||  |||||||||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||| ||||    
T  18520806 aatgatacatagacaccctttattttcatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 18520905  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    ||||||| | |||||||| |||||||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  18520906 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 18520979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 117 - 297
Target Start/End: Complemental strand, 14831992 - 14831812
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||| |||| ||||||||||||||||| || |    
T  14831992 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagaaaaaaaagaaagtgtgcttgtgcgggat 14831893  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||| | |||||||| |||||| ||||||||| |||||||||||||||| |||||  |||||||||||||| ||||||    
T  14831892 ccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactcat 14831812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 156 - 297
Target Start/End: Complemental strand, 28177914 - 28177773
Alignment:
Q  156 acaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaa 255  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||| |||||| ||||||| ||| |||||||||| |||||||||||||||| |||    
T  28177914 acaccccatacattaggaagagggaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaa 28177815  T
Q  256 gggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  28177814 gggtgtattgccacctaaggatgtctatgtatcataactcat 28177773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 117 - 296
Target Start/End: Complemental strand, 35785377 - 35785198
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| |||||| ||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||| |||||| || |    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcgggat 35785278  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||||  | |||||||| |||||||||||||||| ||| |||||||||||| |||||| |||||||||||||| |||||    
T  35785277 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactca 35785198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 2252086 - 2252268
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  2252086 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 2252185  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| |||||||||| |||||||||||||||    
T  2252186 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 122 - 288
Target Start/End: Complemental strand, 13811825 - 13811659
Alignment:
Q  122 tacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacg 221  Q
    |||||| ||||| |||||||||||||| ||||||||| ||||| |||||||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  13811825 tacatagacaccatttattcccatacatccttgtacatcccatgcattaggaagagagaagaggagagagaagagaaagtgtgcttgtgcggggtccacg 13811726  T
Q  222 tggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatc 288  Q
    || | |||||||| |||||||||||||||| ||| | |||||||||| |||||| ||||||||||||    
T  13811725 tgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatc 13811659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 3921183 - 3921365
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||| ||||||||||||||| || |||  ||||||||||||| |||||||     
T  3921183 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 3921282  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  3921283 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 31009170 - 31008988
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||||||| || ||||||||||||| || |||| ||| |||||||||||||||||     
T  31009170 ggaaaatgttacatagacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagagaagaggaaatagaaagtgtgcttgtgcg 31009071  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    || |||||||| | |||||||| ||||||||||||||||  |||  ||||||| || |||||||||| |||||||||||||||    
T  31009070 ggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 115 - 295
Target Start/End: Original strand, 35943812 - 35943992
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||| ||||  |||||| ||||||||||||||||||||||| || |||||||||| || ||||||| ||||||||||||||||||||  ||    
T  35943812 aaaatgttacatagacacattttatttccatacacccttgtacaccccatgcactaggaagagaaaagaggagaggaaagagaaagtgtgcttgtgtggg 35943911  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     |||||||  | |||||||| |||||||||||||||| ||| | |||||||||| |||||| |||||||||||||||||||    
T  35943912 atccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 114 - 295
Target Start/End: Original strand, 33825243 - 33825424
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 213  Q
    |||||||||||||  ||||| ||||||| |||||| |||| |||||||||| || ||||||||||||| || ||| ||||||||||||||||||||| |     
T  33825243 gaaaatgttacattgacaccatttattctcatacagccttctacaccccatgcactaggaagagagaagagaagataaaagagaaagtgtgcttgtgtaa 33825342  T
Q  214 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||| ||| ||  ||||||||| |||||| ||||||||| || | ||||||||||| ||||| ||||||||| ||||| ||||    
T  33825343 ggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 113 - 296
Target Start/End: Original strand, 6259919 - 6260102
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| | | |||||||||| |||||| |||||||| ||||||||||||  |||||||| ||||||  ||||||||||||||||| ||      
T  6259919 ggaaaatgttacatagatatcctttattcctatacacacttgtacatcccatacattagtgagagagaagaggagatgaaagagaaagtgtgcttctgtg 6260018  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
     |||||| ||| ||| |||| | ||||||| |||||||||||||||||||||| || ||| || ||| |||||||||| |||||    
T  6260019 aggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactca 6260102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 20073434 - 20073616
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| ||| |||   ||||||| |||||||| ||||| | | |||  | ||||||||||||| ||||||| ||| ||||||||||||||||||    
T  20073434 ggaaaatgttagatagacattttttattctcatacacctttgtaaatctcatgaactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgca 20073533  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||||||| ||||||  | |||||| |||| |||| ||||||||||||| ||||||| ||||||||| |||||| ||||    
T  20073534 gggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 116 - 290
Target Start/End: Original strand, 36875537 - 36875698
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    |||||||||||| ||||| |||||| |||    ||||||||||||||||  ||||||||||||||| |||||| |||||||||||||||||||||| ||     
T  36875537 aaatgttacatagacaccatttatttcca----cccttgtacaccccatgtattaggaagagagaagaggagaaaaaagagaaagtgtgcttgtgcggga 36875632  T
Q  216 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
    |||||||| |         ||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  36875633 tccacgtgac---------tatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 36875698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 168 - 297
Target Start/End: Original strand, 42414275 - 42414404
Alignment:
Q  168 ttaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcc 267  Q
    |||||||||||||| |||| |||||||| ||||||||||||||| |||||||| || | |||||||| |||||||||||||||| |||||||||||||||    
T  42414275 ttaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcc 42414374  T
Q  268 atctaaggatgtctatgtatcataactcat 297  Q
    | |||  | |||||||||||||| ||||||    
T  42414375 acctactggtgtctatgtatcattactcat 42414404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 113 - 251
Target Start/End: Complemental strand, 21370186 - 21370048
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||||||||||||||||  |||||||| ||||||| |  ||| | |||||||| |||| | ||||| ||||||||| |||| ||||||     
T  21370186 ggaaaatgttacataaacaccctttattttcatacacctttgtacatcttatatactaggaagaaagaagatgagaggaaagagaaaatgtgtttgtgcg 21370087  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgt 251  Q
    ||||||||||| |||| ||||| ||||||| ||||||||    
T  21370086 gggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 39688815 - 39688997
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||||| |||||||||| ||  ||||||||||||||| |  |||  ||||||||||||| ||| |||     
T  39688815 ggaaaatgttacatagacaccttttaattgcatacacctttgtacaccctatgtattaggaagagagaagaaaagaagaaagagaaagtgtacttatgcg 39688914  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||| ||  || |||| | ||| |||||||||||||||| || || ||||||||||  ||||| ||| |||||||||||||||    
T  39688915 gggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactc 39688997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 2177546 - 2177436
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||| | ||||  ||||||| |||||||||||||||| || || || ||||||||||||| ||||||| ||||||||| ||||||||||      
T  2177546 ggaaaatgttacagagacacattttattctcatacacccttgtacatccaatgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtgtg 2177447  T
Q  213 gggtccacgtg 223  Q
    || ||||||||    
T  2177446 ggatccacgtg 2177436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 113 - 290
Target Start/End: Complemental strand, 16328083 - 16327906
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||| ||||||||| ||||||  |||| ||  || ||||||||||| |||||| |||||||| || | |  ||||| ||||||||||||||      
T  16328083 ggaaaatgttagataaacaccatttattttcatatacttttctacaccccatatattagggagagagaagagaaaatgaaagaaaaagtgtgcttgtgtg 16327984  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcat 290  Q
     ||| ||| ||  ||||||||| |||||| ||||||||| || || |||||||||| |||||||| | ||| ||||||    
T  16327983 aggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcat 16327906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 264
Target Start/End: Original strand, 39557457 - 39557586
Alignment:
Q  135 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtca 234  Q
    ||||||| |||| | || |||||||| |||  ||||||||||||||| |||||| ||||||||||||||| ||||   ||||||| |||  |||||||||    
T  39557457 tttattctcatagatccatgtacacctcatgtattaggaagagagaagaggagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtca 39557556  T
Q  235 tatttttgtgtgggtgttaaagggtgtatt 264  Q
     |||||||||||| ||||||  ||||||||    
T  39557557 gatttttgtgtggatgttaagaggtgtatt 39557586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 115 - 295
Target Start/End: Complemental strand, 9603993 - 9603813
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    |||||||||| || ||||| ||||||| |||||||| ||||||| ||||  || || |||||||||| | || |  |||||||||||||| ||||   ||    
T  9603993 aaaatgttacgtagacaccatttattctcatacacctttgtacatcccaagcactaagaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 9603894  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||  || ||| |||||| |||||||||| ||||| || | |||||||  || |||||||||| |||||||||| ||||    
T  9603893 gtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcattactc 9603813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 146 - 295
Target Start/End: Complemental strand, 38296352 - 38296203
Alignment:
Q  146 acacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgt 245  Q
    ||||| || ||||||||||  | || ||||| |||| ||||||  || |||||||||||||||||  || ||||||| || |||||||  ||||||||||    
T  38296352 acacctttatacaccccatgtagtaagaagaaagaagaggagatgaatgagaaagtgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgt 38296253  T
Q  246 gggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||| ||||  ||||||||| || |||||   ||||||||||||||||||    
T  38296252 gggtattaagaggtgtattgacacctaagatagtctatgtatcataactc 38296203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 117 - 247
Target Start/End: Complemental strand, 31132512 - 31132392
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||||||||||||||||  |||||||||||||||||| ||| |||||| ||          ||||||||||| ||||| ||||||||| ||||    
T  31132512 aatgatacataaacaccctttattttcatacacccttgtacacctcatgcattagaaa----------gagagaaaagaaaaagtatgcttgtgcggggt 31132423  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgg 247  Q
    ||||||| | || ||||| ||||||||||||    
T  31132422 ccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 291
Target Start/End: Complemental strand, 10356694 - 10356638
Alignment:
Q  236 atttttgtgtgggtgttaaaggg-tgtattgccatctaaggatgtctatgtatcata 291  Q
    |||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||    
T  10356694 atttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcata 10356638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 33855143 - 33855082
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaa 174  Q
    |||||||||||||| ||||||||||||||| | || || |||||||||||||  ||||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaa 33855082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 287
Target Start/End: Original strand, 41470425 - 41470508
Alignment:
Q  204 gcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtat 287  Q
    |||||||| ||||||||||| | |||||||| |||||| | ||  | ||||||| |||||||||| |||| | |||||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtat 41470508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 18033982 - 18034030
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccc 161  Q
    |||||||||||||| ||||||||||||||| | || || ||||||||||    
T  18033982 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccc 18034030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 38470579 - 38470607
Alignment:
Q  113 ggaaaatgttacataaacaccctttattc 141  Q
    |||||||||||||||||||||||||||||    
T  38470579 ggaaaatgttacataaacaccctttattc 38470607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 1e-63; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 113 - 296
Target Start/End: Complemental strand, 31910374 - 31910191
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||     
T  31910374 ggaaaatgttacatagacaccatttattcccatacactcttgtacatcccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgcg 31910275  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||||| ||||| | |||||| |||||||||||||||| |||| |||||||| || |||||||||||||||||||||||||||    
T  31910274 gggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactca 31910191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 41236525 - 41236347
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  41236525 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 41236426  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||| ||| ||| |||||||||||| |||||| |||||||||||||| ||||    
T  41236425 ccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 50052346 - 50052528
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||  || || ||||||||||||| ||||||| |||||||||||||||||||||     
T  50052346 ggaaaatgttacatagacaccctttattcccatacacctttgtacaccttatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcg 50052445  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||||||| | |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||    
T  50052446 gggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 50052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 48182971 - 48183149
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 48183070  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||||||||||||| ||||||||||||||||  ||||| |||||||||||||| ||||    
T  48183071 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 117 - 296
Target Start/End: Complemental strand, 6034222 - 6034043
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || |    
T  6034222 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 6034123  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||||| | || ||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||| |||||    
T  6034122 ccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 6034043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 113 - 296
Target Start/End: Original strand, 50526089 - 50526272
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||| || ||||||||||||| ||||||| ||| |||||| ||||||||||     
T  50526089 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagcgtgcttgtgcg 50526188  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    |  |||||||| |||||||||| |||||||||||||||| |||||||||||||||| |||| |||||||||||||||| |||||    
T  50526189 gaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactca 50526272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 115 - 297
Target Start/End: Complemental strand, 40574959 - 40574777
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||| ||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||    
T  40574959 aaaatgttagatagacaccttttattctcatacacccttgtacaccccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgttcggg 40574860  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
     |||| || ||  ||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||    
T  40574859 atccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactcat 40574777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 42044289 - 42044467
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  42044289 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 42044388  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| ||||||||||||||||  |||| |||||||||| |||||| |||||||||||||| ||||    
T  42044389 ccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactc 42044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 24995029 - 24995207
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||||||||||||||||||| ||||||||||||| ||||| |||||||||| ||||||||||||||||| ||||||||||| ||||    
T  24995029 aatgatacatagacaccctttattcccatacaccattgtacaccccatgcattaagaagagagaagaggagagaaaagagaaaatgtgcttgtgcggggt 24995128  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||| ||||||||| ||||||||||||||||||||||| |||| || |||||| ||||    
T  24995129 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattactc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 29240068 - 29239886
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||||||      
T  29240068 ggaaaatgttacatagacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgtg 29239969  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||||||| | |||||| | |||||||||||| ||| ||| |||||||||||| |||||| |||||||||||||| ||||    
T  29239968 gggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 117 - 296
Target Start/End: Original strand, 54473455 - 54473634
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| ||||| |||||||||||||||||||||||||||||||| ||||  ||||||||||||||| ||||||||||||| ||||||||||||||| ||||    
T  54473455 aatgatacatgaacaccctttattcccatacacccttgtacactccatgtattaggaagagagaagaggagagaaaagataaagtgtgcttgtgcggggt 54473554  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||||| | |||||| | |||||||||||||||| ||| ||||||||| || |||||| |||||||||||||| |||||    
T  54473555 ccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactca 54473634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 130 - 295
Target Start/End: Original strand, 480382 - 480547
Alignment:
Q  130 caccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacg 229  Q
    ||||| ||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||| | |||    
T  480382 cacccattatttccatacacctttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacg 480481  T
Q  230 tgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||| |||||||||||||||| ||||||||||||| || |||||| |||||||||||||| ||||    
T  480482 tgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 55475373 - 55475191
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| ||| ||||    
T  55475373 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgca 55475274  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  ||||||| ||||| |||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||    
T  55475273 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 135 - 296
Target Start/End: Original strand, 11511402 - 11511563
Alignment:
Q  135 tttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtca 234  Q
    |||||| ||||||||||||||||||| ||| ||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||| | ||||||||    
T  11511402 tttatttccatacacccttgtacacctcatgcattaagaagagagaagagaagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtca 11511501  T
Q  235 tatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
     |||||| ||||||||| |||||||||||||||| |||||| |||||||||||||| |||||    
T  11511502 gatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactca 11511563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 155 - 295
Target Start/End: Original strand, 29234205 - 29234345
Alignment:
Q  155 tacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaa 254  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||  ||| | ||    
T  29234205 tacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaa 29234304  T
Q  255 agggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  29234305 agggtgtattgccatctaagggtgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 41824064 - 41823920
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| ||||||| |||||||| ||||||||| ||| |||||||||||||||| | |||||||||||||||||||||||||||     
T  41824064 ggaaaatgttacatagacaccatttattctcatacacctttgtacacctcatgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcg 41823965  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagg 257  Q
    ||||||| ||| | |||||||| ||||||||||||||||||||||    
T  41823964 gggtccatgtgactacgtgtcagatttttgtgtgggtgttaaagg 41823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 19670634 - 19670816
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  19670634 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 19670733  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  ||||||| ||||| ||||||||||| |||| || ||||||||||||| |||||| ||| |||||||||||||||    
T  19670734 gggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 23608413 - 23608235
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||| |||||||||||||||| || |||||||| ||| |||||||||||||||| |||||| |||||||||||||||||||||  | ||    
T  23608413 aatgatacatagacatcctttattcccatacatccctgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgtggagt 23608314  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     |||||| | |||||||| |||||||||||||||| ||| ||||||||| ||||||||| ||||||| |||||| ||||    
T  23608313 tcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 29547877 - 29548059
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||  ||||||||||||||| || |||  ||||| ||||||| ||| |||     
T  29547877 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagaaaaagtgtacttatgcg 29547976  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    || ||||  ||||||| ||||| |||||||||||||||| || || |||||||||| |||||||||| |||||||||||||||    
T  29547977 ggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 29548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 47986389 - 47986208
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| || ||| | ||||||||||||||| |||||  ||||||||||||||| || | |  ||||||||||||| |||||||     
T  47986389 ggaaaatgttacatagacacctttaattgc-atacacccttgtacatcccatgtattaggaagagagaagagaataagaaagagaaagtgtacttgtgcg 47986291  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  ||||||| ||||| |||||||||||| ||| || || |||||||||| |||||| ||| |||||||||||||||    
T  47986290 gggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 115 - 295
Target Start/End: Complemental strand, 29978065 - 29977885
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagg 214  Q
    ||||||||||||| | | | |||||||| |||||| |||||||||||||||||||||  ||||| || || |||  ||||||||||||||||||||  ||    
T  29978065 aaaatgttacatagatatcttttattcctatacacacttgtacaccccatacattagtgagagaaaagagaagatgaaagagaaagtgtgcttgtgtggg 29977966  T
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||  || | |||||||| ||||||||||||||||||| ||||||||||||| ||| || | | |||||||||| ||||    
T  29977965 gtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattactc 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 116 - 275
Target Start/End: Original strand, 17983664 - 17983823
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    |||||||||||| ||||  |||| |  |||||||||||||||||| |||  ||||||||||||||| || |||  ||||||||||||| ||||||| |||    
T  17983664 aaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 17983763  T
Q  216 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaagg 275  Q
    ||||  ||||||| ||||| |||||||||||||||| || ||||||||||||| ||||||    
T  17983764 tccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 17983823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 113 - 295
Target Start/End: Complemental strand, 32767140 - 32766958
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||  |||| |  ||||||||||||||||| | ||  ||||| ||||||||  || |||  ||||||||||||| ||||||||    
T  32767140 ggaaaatgttacatagacacattttaattgcatacacccttgtacactctatgtattagaaagagagaggagaagaagaaagagaaagtgtacttgtgca 32767041  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||  ||||||| ||||| |||||||| ||||||| || ||||||||||||| |||||  ||| |||||||||||||||    
T  32767040 gggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactc 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 50813810 - 50813992
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  |||||||||||||||| | |||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  50813810 ggaaaatgttacatagacaccttttaattgcatacacccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50813909  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||| ||  || |||| ||||| |||||||||||||||| || ||||||||| ||| |||||  ||| |||||||||||||||    
T  50813910 gggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactc 50813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 117 - 291
Target Start/End: Original strand, 53352496 - 53352661
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||||||||||  ||||||||||||||||||        ||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  53352496 aatgatacatagacaccctttattttcatacacccttgtacacc--------taggaagagagaagaggagagaaaagagaaagtatgcttgtgcggggt 53352587  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcata 291  Q
    |||| |  | |||||||| |||||||||| ||||||||||  ||||||| || |||||| |||||||||||||||    
T  53352588 ccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcata 53352661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 113 - 297
Target Start/End: Complemental strand, 3481826 - 3481652
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||||||||||| ||||||||||          || || ||| ||||||||| | | ||| ||||||||||||||||||||      
T  3481826 ggaaaatgttacatagacaccctttattctcatacaccct----------atgcactagaaagagagaagatgggaggaaagagaaagtgtgcttgtgtg 3481737  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    ||||||||||| | | |||||| |||||||||||||||| |||| ||||||||||| |||| | |||||||||||||| ||||||    
T  3481736 gggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcattactcat 3481652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 114 - 295
Target Start/End: Original strand, 48647645 - 48647826
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 213  Q
    |||||||||||||| ||| | ||||||   ||||| | |||||||  | || || ||||||||||||| ||||||| ||||||||| ||||||||||| |    
T  48647645 gaaaatgttacatagacatcatttatttttatacatctttgtacattctatgcactaggaagagagaagaggagaggaaagagaaattgtgcttgtgcgg 48647744  T
Q  214 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
     ||||||||| |||||||| | |||||| ||||||||||||  |||||||||  | |||||||||| ||||| |||||||||    
T  48647745 agtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataactc 48647826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 28480186 - 28480368
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||    ||||| ||||||||| | ||| || ||||||||||||| ||||||  || ||||||||||| |||||      
T  28480186 ggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtg 28480285  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||| || | || ||||| ||||||||||| |||||||   |||||||| || |||||| ||||||||||| |||||||    
T  28480286 gggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactc 28480368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 28481061 - 28481243
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||    ||||| ||||||||| | ||| || ||||||||||||| ||||||  || ||||||||||| |||||      
T  28481061 ggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtg 28481160  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||| || | || ||||| ||||||||||| |||||||   |||||||| || |||||| ||||||||||| |||||||    
T  28481161 gggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactc 28481243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 28481936 - 28482118
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| |||||||||||    ||||| ||||||||| | ||| || ||||||||||||| ||||||  || ||||||||||| |||||      
T  28481936 ggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtg 28482035  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    |||||||| || | || ||||| ||||||||||| |||||||   |||||||| || |||||| ||||||||||| |||||||    
T  28482036 gggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactc 28482118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 113 - 297
Target Start/End: Original strand, 18924413 - 18924597
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||| |  ||||||||||| |||||| |||  ||||||||||||||| || |||  ||||||||||||| |||||||     
T  18924413 ggaaaatgttacatagacaccttttaattgcatacacccttttacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 18924512  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    | || ||  | ||||| ||||| |||||||||||| | | || ||||||||||||| |||||| | | |||| ||||||||||||    
T  18924513 gagttcatattgccacatgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataactcat 18924597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 29589658 - 29589831
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||| ||||||| ||||| |||| |  ||||||| |||||||||| |||  ||||||||||||||| || |||  ||||||||||||| ||||||      
T  29589658 ggaaaatattacatagacaccttttaattgcatacactcttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgtg 29589757  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtat 287  Q
    |||||||  ||||||| | ||| |||||||||||||||| || |||||||||| || |||||| ||| |||||||    
T  29589758 gggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattg-caactaagggtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 167 - 295
Target Start/End: Original strand, 8343135 - 8343263
Alignment:
Q  167 attaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgc 266  Q
    ||||||||||||||| || |||  ||||||||||| | ||| ||| |||||||  ||||||| ||||| |||||| ||| ||||| ||||| ||||||||    
T  8343135 attaggaagagagaagagaagaagaaagagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgc 8343234  T
Q  267 catctaaggatgtctatgtatcataactc 295  Q
    || |||||||||| |||||||||||||||    
T  8343235 cacctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 295
Target Start/End: Complemental strand, 47104723 - 47104544
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    ||||||||| || ||||  ||||||| | ||||  || ||||||| ||| ||||| |||||||||| ||||||  |||||||||||||| |||||  |||    
T  47104723 aaatgttacgtagacactttttattctcgtacattctagtacacctcatgcattaagaagagagaagaggagatgaaagagaaagtgtgtttgtgtgggg 47104624  T
Q  216 tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    || |     |||||||||| |||||||||||||||| | || |||||||| |||||||| |||||||| |||||| ||||    
T  47104623 tcaataaaaccacgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactc 47104544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 56300086 - 56300217
Alignment:
Q  116 aaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg 215  Q
    ||||||||| || |||  |||||||| ||||||  |||||||| | |||||||||| ||||||||| ||||||| |||||||||||||| |||||||||     
T  56300086 aaatgttacgtagacattctttattctcatacaatcttgtacatctcatacattagaaagagagaagaggagaggaaagagaaagtgtgtttgtgcagga 56300185  T
Q  216 tccacgtggccacgtgtcatatttttgtgtgg 247  Q
    | ||  || |||| ||||| ||||||||||||    
T  56300186 ttcatatgaccacatgtcagatttttgtgtgg 56300217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 295
Target Start/End: Original strand, 55079685 - 55079814
Alignment:
Q  167 attaggaagagagaataggagagaaaagagaaagtgtgcttgtgcaggg-tccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattg 265  Q
    ||||||||||||||| || |||  ||||||||||||| ||||||  ||| ||||  ||||||| ||||| |||||||| ||||||| ||  |||||||||    
T  55079685 attaggaagagagaagagaagaagaaagagaaagtgtacttgtgtgggggtccatatggccacatgtcagatttttgtatgggtgtcaagaggtgtattg 55079784  T
Q  266 ccatctaaggatgtctatgtatcataactc 295  Q
    ||| |||||| ||| |||||||||||||||    
T  55079785 ccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 295
Target Start/End: Original strand, 44536664 - 44536845
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||  |||| |  ||||||  ||||||||||| ||  ||||||||||||||| || |||  ||||||||||||| ||| ||      
T  44536664 ggaaaatgttacatagacacattttaattgcatacattcttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgtg 44536763  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||| |  || |||| ||||| |||||||||||| || | ||||||||||||||| ||||   ||| |||||||||||||||    
T  44536764 gggtctatatgaccacatgtcagatttttgtgtggatg-tcaagggtgtattgccacctaaaagtgtttatgtatcataactc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 172 - 296
Target Start/End: Complemental strand, 29535499 - 29535376
Alignment:
Q  172 gaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatct 271  Q
    |||||||||||| ||||  |||||||||||||| |||||  || |||||||||||| ||| ||||||||||||||| |   ||  | ||||||| || ||    
T  29535499 gaagagagaataagagatgaaagagaaagtgtgtttgtgtgggatccacgtggccatgtg-catatttttgtgtggataccaagagatgtattgtcacct 29535401  T
Q  272 aaggatgtctatgtatcataactca 296  Q
    |||  ||||||||||||||||||||    
T  29535400 aagattgtctatgtatcataactca 29535376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 43487883 - 43487793
Alignment:
Q  115 aaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 210  Q
    ||||||| |||||||||||||||||| |  |||||||| |||||||||||||| ||||||| || |     |||| ||||||||||||||||||||    
T  43487883 aaaatgtcacataaacaccctttatttcagtacaccctggtacaccccatacactaggaagtgaaa-----agagcaaagagaaagtgtgcttgtg 43487793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 143 - 291
Target Start/End: Complemental strand, 18769260 - 18769113
Alignment:
Q  143 catacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttg 242  Q
    ||||||| ||||||||||| ||  | ||| |||||| || ||||||  ||||||||| |||  |||||  ||||  || || |||||||||| |||||||    
T  18769260 catacactcttgtacaccc-atgtactagaaagagaaaaaaggagatgaaagagaaaatgtatttgtgtggggtttacatgaccacgtgtcagatttttg 18769162  T
Q  243 tgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcata 291  Q
    ||||||||||| ||||||||| |  |  ||||||||| |||||||||||    
T  18769161 tgtgggtgttagagggtgtatgggtacataaggatgtttatgtatcata 18769113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 263
Target Start/End: Original strand, 18768972 - 18769115
Alignment:
Q  119 tgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggtcc 218  Q
    ||||||||||||| | ||||  | |||||| |||||||||||| ||  |||||||||||| || | ||||  ||||||||| |||| |||||  || |      
T  18768972 tgttacataaacatcatttaccctcatacatccttgtacaccc-atgtattaggaagagaaaaaatgagatgaaagagaaaatgtgtttgtgtgggattt 18769070  T
Q  219 acgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtat 263  Q
    || || |||| ||||| ||||||||||||||||||  ||||||||    
T  18769071 acatgaccacatgtcagatttttgtgtgggtgttagggggtgtat 18769115  T

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Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 1771366 - 1771315
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccat 164  Q
    |||||||||||||| ||||||||||||||| | || || |||||||||||||    
T  1771366 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccat 1771315  T

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Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Original strand, 33703245 - 33703307
Alignment:
Q  206 ttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccat 269  Q
    |||||| || |||| || ||||||||||| | ||||||||||||| ||||||||||||||||||    
T  33703245 ttgtgcgggatccaagttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgccat 33703307  T

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Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 55966446 - 55966418
Alignment:
Q  113 ggaaaatgttacataaacaccctttattc 141  Q
    |||||||||||||||||||||||||||||    
T  55966446 ggaaaatgttacataaacaccctttattc 55966418  T

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Target: scaffold1268 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 114 - 297
Target Start/End: Original strand, 848 - 1031
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 213  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||||||| |    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  214 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    | | |||||| | ||||||||  ||||||||||| |||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  948 gattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactcat 1031  T

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Target: scaffold1267 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 114 - 297
Target Start/End: Original strand, 848 - 1031
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 213  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||||||| |    
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  214 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactcat 297  Q
    | | |||||| | ||||||||  ||||||||||| |||||||||||||||||||| |||| |||||||||||||||| ||||||    
T  948 gattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactcat 1031  T

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Target: scaffold0237 (Bit Score: 111; Significance: 8e-56; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 4207 - 4029
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||| ||| || |    
T  4207 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 4108  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||  | |||||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  4107 ccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 4029  T

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Target: scaffold0321 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 117 - 295
Target Start/End: Original strand, 10031 - 10209
Alignment:
Q  117 aatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcagggt 216  Q
    |||| |||||| |||||| ||||| |||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| |  |||    
T  10031 aatgatacatagacacccattatttccatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacgcggt 10130  T
Q  217 ccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactc 295  Q
    ||||||| | |||||||| |||||| ||||| ||| ||||| |||||||||| |||| | |||||||||||||||||||    
T  10131 ccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataactc 10209  T

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Target: scaffold0110 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 113 - 296
Target Start/End: Original strand, 8781 - 8964
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgca 212  Q
    ||||||||||||||| ||||| |||||||  |||||||||||||||||||||| ||||||||||||||| | | ||| ||||||||| ||| ||||||      
T  8781 ggaaaatgttacatagacaccttttattcttatacacccttgtacaccccatatattaggaagagagaagatgggaggaaagagaaaatgtacttgtgtg 8880  T
Q  213 gggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgtatcataactca 296  Q
    ||||||||||| | | |||||| |||||||||| | ||| |||  |||||||| ||  ||||||||||||| ||||||||||||    
T  8881 gggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcataactca 8964  T

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Target: scaffold0018 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 114 - 268
Target Start/End: Complemental strand, 152679 - 152525
Alignment:
Q  114 gaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtgcag 213  Q
    |||||||||||||| ||||| |||| |  |||||||||||||||| |||||  ||||| ||||||||| || |||  |||||||||||||  |||||| |    
T  152679 gaaaatgttacatagacaccttttaattgcatacacccttgtacatcccatgtattagaaagagagaagagaagaagaaagagaaagtgtatttgtgcgg 152580  T
Q  214 ggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    | ||||  || |||| ||||| |||||||||||||||| || |||||||||||||    
T  152579 gatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgcca 152525  T

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Target: scaffold0316 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 199
Target Start/End: Complemental strand, 17285 - 17199
Alignment:
Q  113 ggaaaatgttacataaacaccctttattcccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaa 199  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||||  |||   ||||||||||||| ||||||| |||||||||    
T  17285 ggaaaatgttacatagacaccctttatttccatacacctttgtacaccttatattctaggaagagagaagaggagaggaaagagaaa 17199  T

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Target: scaffold0316; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 297
Target Start/End: Complemental strand, 17163 - 17056
Alignment:
Q  186 agagaaaagagaaagtgtgcttgtgcagggtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgccatctaaggatgtctatgt 285  Q
    |||| ||||||||| ||||||||||| ||||||| ||| |||| ||||| |||||||||||| |||  | || |||||||| | ||    |||||||||     
T  17163 agaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgcaacct----atgtctatga 17068  T
Q  286 atcataactcat 297  Q
    ||||||||||||    
T  17067 atcataactcat 17056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 268
Target Start/End: Original strand, 798 - 850
Alignment:
Q  215 gtccacgtggccacgtgtcatatttttgtgtgggtgttaaagggtgtattgcca 268  Q
    ||||| || ||||||||||| | ||||||||||||| |||||||||||||||||    
T  798 gtccaggttgccacgtgtcagaattttgtgtgggtg-taaagggtgtattgcca 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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