View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17302_low_14 (Length: 424)
Name: NF17302_low_14
Description: NF17302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17302_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 342; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 19 - 414
Target Start/End: Original strand, 1265851 - 1266245
Alignment:
| Q |
19 |
aattcccactatataagttgagtcacacatcatattcccatctcatatcaatactctaacttcctataatctcaaattcacttctcatcatcccaaaata |
118 |
Q |
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| T |
1265851 |
aattcccactatataagttgagtcacacatcatattcccatctcatatcactactctaacttcctataatctcaaattcacttctcatcatcccaaaata |
1265950 |
T |
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| Q |
119 |
tatattagcaccacnnnnnnnnnnntcatctccatgatggtggttcttaatatacttttgttcatactagtgacttttctatttaaactcttgtatgaaa |
218 |
Q |
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|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1265951 |
tatattggcaccacaaaaaaaaaa-tcatctccatgatggtggttcttaatatacttttgttcatactagtgacttttctatttaaactcttgtatgaaa |
1266049 |
T |
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| Q |
219 |
acctatcatgttacttcctcactccactacgcatcaagaaaatcatggagatgcaaggtgttcggggcccgagacctagcttcttcaccgggaacatcct |
318 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1266050 |
acctatcatgttacttcctcactccactgcgcatcaagaaaatcatggagatgcaaggtgttcggggcccgagacctagcttcttcaccgggaacatcct |
1266149 |
T |
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| Q |
319 |
cgacatggcttcccttgtttccaaatcaacctcacaagacatgaaaactataagccatgacattgttggtcgccttcttcctcattttcttctctg |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
1266150 |
cgacatggcttcccttgtttccaaatcaacctcacaagacatgaaaactataagccatgacattgtcggtcgccttcttcctcattttcttctctg |
1266245 |
T |
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