View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17302_low_40 (Length: 287)
Name: NF17302_low_40
Description: NF17302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17302_low_40 |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 29 - 267
Target Start/End: Original strand, 10204262 - 10204500
Alignment:
| Q |
29 |
gatgatacaggtacatacttcatttattttgagagccatgtcattaatgtccacaaaagggtcaatggaggtccaatgggtatactagaaaaaatgaatc |
128 |
Q |
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| T |
10204262 |
gatgatacaggtacatacttcatttattttgagagccatgtcattaatgtccacgaaagggtcaatggaagtccaatgggtatactagaaaaaatgaatc |
10204361 |
T |
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| Q |
129 |
actagagccaacacgttaagagaacccatctttgagattatgcttggctttaattaataataaaattttaaggatacgagcaccttaagatgtacgattt |
228 |
Q |
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||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
10204362 |
actagagccaacacgttaagagaacccatctttgaaattattcttagctttaattaataataaaattttaaggatacaagcaccttaagatgtacgattt |
10204461 |
T |
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| Q |
229 |
ctgctctcctcgtatacttttcgctcgcaaccaactgaa |
267 |
Q |
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||||||||||| | ||||||||||| |||||| ||||| |
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| T |
10204462 |
ctgctctcctcctgcacttttcgctcacaaccagctgaa |
10204500 |
T |
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