View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17302_low_58 (Length: 232)
Name: NF17302_low_58
Description: NF17302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17302_low_58 |
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Alignment Details
Target: chr2 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 217
Target Start/End: Complemental strand, 9568127 - 9567924
Alignment:
| Q |
14 |
agaagaacttattagatgtgcacagtttgtatttgatggtgattttcaaaaagcaattggattcatgaataaggtgttgggaaagatggtatcggttgcc |
113 |
Q |
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| T |
9568127 |
agaagaacttattagatgtgcacagtttgtatttgatggtgattttcaaaaagcaattggattcatgaataaggtgttgggaaagatggtatcggttgcc |
9568028 |
T |
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| Q |
114 |
ggttctccaattcaaaggttaggtgcttacatgttggagggattaagagcaagggtggaatcatcagggagtgcaatttataaagccttgaaatgtgaag |
213 |
Q |
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| T |
9568027 |
ggttctccaattcaaaggttaggtgcttacatgttggagggattaagagcaagggtggaatcatcagggagtgcaatttataaagccttgaaatgtgaag |
9567928 |
T |
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| Q |
214 |
aacc |
217 |
Q |
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|||| |
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| T |
9567927 |
aacc |
9567924 |
T |
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