View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17302_low_60 (Length: 226)
Name: NF17302_low_60
Description: NF17302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17302_low_60 |
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Alignment Details
Target: chr4 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 6089855 - 6089736
Alignment:
| Q |
92 |
ctatggctagtgatgagggttttgaaggttaccatgtcccacaacaaagtagaagagataagcttagagttgttgtggctcaaaatcaacaacctcatga |
191 |
Q |
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| T |
6089855 |
ctatggctagtgatgagggttttgaaggttaccatgtcccacaacaaagtagaagagataagcttagagttgttgtggctcaaaatcaacaacctcatga |
6089756 |
T |
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| Q |
192 |
aactttacttccttcctatg |
211 |
Q |
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|||||||||||||| ||||| |
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| T |
6089755 |
aactttacttcctttctatg |
6089736 |
T |
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