View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17302_low_64 (Length: 209)

Name: NF17302_low_64
Description: NF17302
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17302_low_64
NF17302_low_64
[»] chr2 (27 HSPs)
chr2 (53-200)||(21507946-21508093)
chr2 (17-52)||(5474903-5474938)
chr2 (17-55)||(4183170-4183208)
chr2 (17-52)||(1260182-1260217)
chr2 (17-52)||(3446727-3446762)
chr2 (17-52)||(8250339-8250374)
chr2 (17-52)||(17078454-17078489)
chr2 (17-52)||(18694782-18694817)
chr2 (17-52)||(19281605-19281640)
chr2 (17-52)||(19684070-19684105)
chr2 (17-52)||(22653682-22653717)
chr2 (17-52)||(25857333-25857368)
chr2 (17-52)||(27297172-27297207)
chr2 (17-52)||(33228971-33229006)
chr2 (17-52)||(38400307-38400342)
chr2 (17-52)||(44948593-44948628)
chr2 (18-52)||(11050796-11050830)
chr2 (19-53)||(43895909-43895943)
chr2 (22-51)||(2304284-2304313)
chr2 (17-46)||(5612957-5612986)
chr2 (17-50)||(34613978-34614011)
chr2 (17-54)||(38525591-38525628)
chr2 (19-52)||(44822420-44822453)
chr2 (17-53)||(1844813-1844849)
chr2 (17-49)||(2806539-2806571)
chr2 (17-53)||(33233260-33233296)
chr2 (17-53)||(44857272-44857308)
[»] chr1 (42 HSPs)
chr1 (17-53)||(45333749-45333785)
chr1 (17-55)||(21265650-21265688)
chr1 (18-54)||(1836498-1836534)
chr1 (17-53)||(10664832-10664868)
chr1 (19-55)||(17671450-17671486)
chr1 (17-53)||(32594247-32594283)
chr1 (17-53)||(33207201-33207237)
chr1 (17-53)||(42054329-42054365)
chr1 (17-53)||(51050186-51050222)
chr1 (17-52)||(1151756-1151791)
chr1 (17-52)||(1570230-1570265)
chr1 (17-52)||(3269616-3269651)
chr1 (17-52)||(4482636-4482671)
chr1 (17-52)||(6438102-6438137)
chr1 (17-52)||(6702573-6702608)
chr1 (17-52)||(6893275-6893310)
chr1 (17-52)||(7166265-7166300)
chr1 (17-52)||(8865851-8865886)
chr1 (17-52)||(15819639-15819674)
chr1 (17-52)||(22563383-22563418)
chr1 (17-52)||(25999847-25999882)
chr1 (17-52)||(26584784-26584819)
chr1 (17-52)||(33254725-33254760)
chr1 (17-52)||(33274897-33274932)
chr1 (17-52)||(35605661-35605696)
chr1 (17-52)||(40519582-40519617)
chr1 (17-52)||(42490448-42490483)
chr1 (17-52)||(46965737-46965772)
chr1 (17-52)||(48638529-48638564)
chr1 (17-52)||(50899548-50899583)
chr1 (18-52)||(18216903-18216937)
chr1 (17-51)||(47469111-47469145)
chr1 (17-58)||(13773159-13773200)
chr1 (17-50)||(16343027-16343060)
chr1 (22-51)||(42908766-42908795)
chr1 (17-53)||(6463074-6463110)
chr1 (17-49)||(9866222-9866254)
chr1 (17-53)||(16526215-16526251)
chr1 (17-49)||(24874971-24875003)
chr1 (17-53)||(34058210-34058246)
chr1 (17-53)||(37662595-37662631)
chr1 (17-53)||(40520826-40520862)
[»] chr7 (33 HSPs)
chr7 (17-55)||(42443683-42443721)
chr7 (17-54)||(2228970-2229007)
chr7 (17-54)||(47999775-47999812)
chr7 (17-53)||(27424835-27424871)
chr7 (17-53)||(37300137-37300173)
chr7 (17-52)||(2681093-2681128)
chr7 (17-52)||(5990183-5990218)
chr7 (17-52)||(9877305-9877340)
chr7 (17-52)||(10244927-10244962)
chr7 (17-52)||(12640627-12640662)
chr7 (17-52)||(15238886-15238921)
chr7 (17-52)||(19753006-19753041)
chr7 (17-52)||(23102596-23102631)
chr7 (17-52)||(25833552-25833587)
chr7 (17-52)||(29617402-29617437)
chr7 (17-52)||(35950125-35950160)
chr7 (17-52)||(36389704-36389739)
chr7 (17-52)||(44616599-44616634)
chr7 (17-52)||(47641042-47641077)
chr7 (18-52)||(36469744-36469778)
chr7 (17-51)||(41853995-41854029)
chr7 (17-54)||(31026214-31026251)
chr7 (19-52)||(32074435-32074468)
chr7 (19-52)||(35815835-35815868)
chr7 (16-52)||(9233799-9233835)
chr7 (16-52)||(9929941-9929977)
chr7 (17-49)||(24781030-24781062)
chr7 (17-49)||(27510295-27510327)
chr7 (17-53)||(30806111-30806147)
chr7 (17-53)||(36174386-36174422)
chr7 (17-49)||(36391942-36391974)
chr7 (17-53)||(41084035-41084071)
chr7 (17-53)||(46534786-46534822)
[»] chr8 (47 HSPs)
chr8 (15-52)||(1503907-1503944)
chr8 (17-54)||(10736912-10736949)
chr8 (17-54)||(26022242-26022279)
chr8 (15-52)||(33604208-33604245)
chr8 (16-52)||(6280477-6280513)
chr8 (17-53)||(11875882-11875918)
chr8 (17-53)||(11890889-11890925)
chr8 (17-53)||(16449121-16449157)
chr8 (17-53)||(28909461-28909497)
chr8 (17-53)||(34413058-34413094)
chr8 (17-52)||(12263-12298)
chr8 (17-52)||(94549-94584)
chr8 (17-52)||(1937307-1937342)
chr8 (17-52)||(8265265-8265300)
chr8 (17-52)||(17027918-17027953)
chr8 (17-52)||(17558354-17558389)
chr8 (17-52)||(17698519-17698554)
chr8 (17-52)||(24458314-24458349)
chr8 (17-52)||(29514623-29514658)
chr8 (17-52)||(29716857-29716892)
chr8 (17-52)||(30972855-30972890)
chr8 (17-52)||(32719645-32719680)
chr8 (17-52)||(35939484-35939519)
chr8 (17-52)||(38745317-38745352)
chr8 (17-52)||(39362262-39362297)
chr8 (17-52)||(41689879-41689914)
chr8 (17-52)||(43656033-43656068)
chr8 (17-52)||(44340383-44340418)
chr8 (18-52)||(2168486-2168520)
chr8 (16-54)||(7797125-7797163)
chr8 (16-54)||(7816398-7816436)
chr8 (18-52)||(9187262-9187296)
chr8 (17-51)||(23178929-23178963)
chr8 (19-52)||(257536-257569)
chr8 (19-52)||(658351-658384)
chr8 (19-52)||(844087-844120)
chr8 (17-54)||(34894364-34894401)
chr8 (19-52)||(43085263-43085296)
chr8 (17-53)||(2787119-2787155)
chr8 (17-53)||(2792775-2792811)
chr8 (17-53)||(20540144-20540180)
chr8 (17-53)||(26280822-26280858)
chr8 (17-49)||(34158695-34158727)
chr8 (17-53)||(36540283-36540319)
chr8 (17-53)||(37092087-37092123)
chr8 (17-53)||(37717359-37717395)
chr8 (17-53)||(43284004-43284040)
[»] chr6 (29 HSPs)
chr6 (17-54)||(4408353-4408390)
chr6 (18-55)||(8857084-8857121)
chr6 (17-54)||(19953866-19953903)
chr6 (17-53)||(17441877-17441913)
chr6 (17-52)||(607184-607219)
chr6 (17-52)||(3794211-3794246)
chr6 (17-52)||(7177292-7177327)
chr6 (17-52)||(7207841-7207876)
chr6 (17-52)||(7545326-7545361)
chr6 (17-52)||(7865393-7865428)
chr6 (17-52)||(9246420-9246455)
chr6 (17-52)||(9372239-9372274)
chr6 (17-52)||(9435623-9435658)
chr6 (17-52)||(10934596-10934631)
chr6 (17-52)||(15091445-15091480)
chr6 (17-52)||(30885608-30885643)
chr6 (17-52)||(33573814-33573849)
chr6 (18-52)||(1968993-1969027)
chr6 (17-50)||(2251837-2251870)
chr6 (17-54)||(21248527-21248564)
chr6 (19-52)||(22574867-22574900)
chr6 (16-53)||(22997332-22997369)
chr6 (16-53)||(23791032-23791069)
chr6 (17-53)||(3640510-3640546)
chr6 (17-49)||(8439675-8439707)
chr6 (17-53)||(19892314-19892350)
chr6 (17-53)||(30391258-30391294)
chr6 (17-53)||(30704956-30704992)
chr6 (17-53)||(31705895-31705931)
[»] chr4 (43 HSPs)
chr4 (17-54)||(46105530-46105567)
chr4 (17-53)||(8433661-8433697)
chr4 (17-53)||(8965090-8965126)
chr4 (17-57)||(40051614-40051654)
chr4 (17-53)||(43147422-43147458)
chr4 (17-53)||(43207665-43207701)
chr4 (17-53)||(48798275-48798311)
chr4 (17-52)||(3847678-3847713)
chr4 (17-52)||(6371111-6371146)
chr4 (17-56)||(9761108-9761147)
chr4 (17-52)||(23705191-23705226)
chr4 (17-52)||(24680124-24680159)
chr4 (17-52)||(26868346-26868381)
chr4 (17-52)||(26919506-26919541)
chr4 (17-52)||(35219538-35219573)
chr4 (17-52)||(35465432-35465467)
chr4 (17-52)||(37935858-37935893)
chr4 (17-52)||(39023172-39023207)
chr4 (17-52)||(43596892-43596927)
chr4 (17-52)||(44602482-44602517)
chr4 (17-52)||(45126129-45126164)
chr4 (17-52)||(45849044-45849079)
chr4 (17-52)||(46775068-46775103)
chr4 (17-52)||(48569214-48569249)
chr4 (17-52)||(49901479-49901514)
chr4 (17-52)||(52757316-52757351)
chr4 (17-52)||(55251389-55251424)
chr4 (18-52)||(3764047-3764081)
chr4 (17-51)||(52015489-52015523)
chr4 (19-52)||(18360490-18360523)
chr4 (19-52)||(36602406-36602439)
chr4 (19-52)||(47934112-47934145)
chr4 (17-50)||(51890796-51890829)
chr4 (17-54)||(55536375-55536412)
chr4 (17-53)||(4958594-4958630)
chr4 (17-49)||(22230472-22230504)
chr4 (17-49)||(22788712-22788744)
chr4 (17-49)||(24997472-24997504)
chr4 (17-53)||(30217595-30217631)
chr4 (17-49)||(31852349-31852381)
chr4 (17-53)||(34353775-34353811)
chr4 (17-49)||(40994141-40994173)
chr4 (17-49)||(43978008-43978040)
[»] chr3 (46 HSPs)
chr3 (16-53)||(31528995-31529032)
chr3 (17-53)||(3748640-3748676)
chr3 (17-53)||(7269951-7269987)
chr3 (17-53)||(7920316-7920352)
chr3 (17-53)||(22501969-22502005)
chr3 (17-53)||(46795967-46796003)
chr3 (17-52)||(882386-882421)
chr3 (17-52)||(2522923-2522958)
chr3 (17-52)||(11820001-11820036)
chr3 (17-52)||(19550503-19550538)
chr3 (17-52)||(19999864-19999899)
chr3 (17-52)||(28550357-28550392)
chr3 (17-52)||(30555265-30555300)
chr3 (17-52)||(31327539-31327574)
chr3 (17-52)||(31327756-31327791)
chr3 (17-52)||(32256592-32256627)
chr3 (17-52)||(37800649-37800684)
chr3 (18-53)||(39300380-39300415)
chr3 (17-52)||(39966112-39966147)
chr3 (17-52)||(40192153-40192188)
chr3 (17-52)||(40548300-40548335)
chr3 (17-52)||(40933869-40933904)
chr3 (17-52)||(44652020-44652055)
chr3 (17-52)||(45701341-45701376)
chr3 (17-52)||(48739782-48739817)
chr3 (17-52)||(50496852-50496887)
chr3 (17-52)||(52410279-52410314)
chr3 (17-52)||(52945892-52945927)
chr3 (17-52)||(53163591-53163626)
chr3 (17-52)||(53347328-53347363)
chr3 (17-55)||(19996490-19996528)
chr3 (17-51)||(24303388-24303422)
chr3 (19-53)||(45551849-45551883)
chr3 (17-50)||(6920001-6920034)
chr3 (19-52)||(33225388-33225421)
chr3 (17-54)||(34102649-34102686)
chr3 (19-52)||(37488500-37488533)
chr3 (17-49)||(4139000-4139032)
chr3 (17-49)||(9176624-9176656)
chr3 (17-53)||(10176941-10176977)
chr3 (18-54)||(13638284-13638320)
chr3 (17-49)||(34757529-34757561)
chr3 (17-53)||(36666457-36666493)
chr3 (17-53)||(45871013-45871049)
chr3 (17-49)||(47098732-47098764)
chr3 (17-49)||(52046423-52046455)
[»] scaffold0275 (1 HSPs)
scaffold0275 (17-53)||(8817-8853)
[»] scaffold0088 (1 HSPs)
scaffold0088 (17-53)||(10864-10900)
[»] scaffold0707 (1 HSPs)
scaffold0707 (17-52)||(58-93)
[»] scaffold0608 (1 HSPs)
scaffold0608 (17-52)||(8963-8998)
[»] scaffold0445 (1 HSPs)
scaffold0445 (17-52)||(4052-4087)
[»] scaffold0128 (1 HSPs)
scaffold0128 (17-52)||(17617-17652)
[»] scaffold0121 (1 HSPs)
scaffold0121 (17-52)||(46523-46558)
[»] scaffold0100 (1 HSPs)
scaffold0100 (17-52)||(45881-45916)
[»] scaffold0024 (1 HSPs)
scaffold0024 (17-52)||(59780-59815)
[»] scaffold0009 (1 HSPs)
scaffold0009 (17-52)||(266735-266770)
[»] scaffold0002 (1 HSPs)
scaffold0002 (17-52)||(8863-8898)
[»] chr5 (36 HSPs)
chr5 (17-52)||(1743124-1743159)
chr5 (17-52)||(2848210-2848245)
chr5 (17-52)||(4417723-4417758)
chr5 (17-52)||(6518814-6518849)
chr5 (17-52)||(9835030-9835065)
chr5 (17-52)||(11897245-11897280)
chr5 (17-52)||(12463753-12463788)
chr5 (17-52)||(12891554-12891589)
chr5 (17-52)||(16603395-16603430)
chr5 (17-52)||(17545210-17545245)
chr5 (17-52)||(21918049-21918084)
chr5 (17-52)||(21962143-21962178)
chr5 (17-52)||(25648123-25648158)
chr5 (17-52)||(27765254-27765289)
chr5 (17-52)||(29713414-29713449)
chr5 (17-52)||(32505685-32505720)
chr5 (18-53)||(32706318-32706353)
chr5 (17-52)||(41179841-41179876)
chr5 (17-52)||(42320314-42320349)
chr5 (17-52)||(42916386-42916421)
chr5 (17-55)||(24033071-24033109)
chr5 (17-54)||(2328587-2328624)
chr5 (17-50)||(4745914-4745947)
chr5 (19-56)||(11795500-11795537)
chr5 (19-52)||(13621986-13622019)
chr5 (20-53)||(21749418-21749451)
chr5 (17-50)||(25472621-25472654)
chr5 (19-52)||(25729480-25729513)
chr5 (19-52)||(41477398-41477431)
chr5 (17-53)||(5966825-5966861)
chr5 (17-53)||(18815344-18815380)
chr5 (18-54)||(18993500-18993536)
chr5 (17-49)||(23292455-23292487)
chr5 (19-51)||(25660907-25660939)
chr5 (17-49)||(35515512-35515544)
chr5 (17-53)||(42525396-42525432)
[»] scaffold0460 (1 HSPs)
scaffold0460 (17-53)||(12455-12491)
[»] scaffold0366 (1 HSPs)
scaffold0366 (17-49)||(898-930)
[»] scaffold0014 (1 HSPs)
scaffold0014 (17-49)||(12299-12331)


Alignment Details
Target: chr2 (Bit Score: 132; Significance: 9e-69; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 53 - 200
Target Start/End: Original strand, 21507946 - 21508093
Alignment:
Q  53 tgtgacgcttccgtcttaatggtacataaatagtctcaattttctataccatatataagggtcgcgttgaagtgtaccaataaaaaatgaactttgtaac 152  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21507946 tgtgacgtttccgtcttaatggtacataaatagtctcaattttctataccatatataagggtcgcgttgaagtgtaccaataaaaaatgaactttgtaac 21508045  T
Q  153 tagtgaagtcttatttaaaacttcaaacaactaacgtcacaggttctg 200  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  21508046 tagtgaagtcttatttaagacttcgaacaactaacgtcataggttctg 21508093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 5474938 - 5474903
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    ||||||||||||||||||||||||||||||||||||    
T  5474938 caatatccctgccaactgagctaagctcacggggat 5474903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 4183208 - 4183170
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattgt 55  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  4183208 caatatccctaccaactgagctaagctcacggggattgt 4183170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 1260217 - 1260182
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  1260217 caatatccctaccaactgagctaagctcacggggat 1260182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 3446762 - 3446727
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  3446762 caatatccctaccaactgagctaagctcacggggat 3446727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 8250339 - 8250374
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  8250339 caatatccctaccaactgagctaagctcacggggat 8250374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 17078489 - 17078454
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  17078489 caatatccctaccaactgagctaagctcacggggat 17078454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 18694817 - 18694782
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  18694817 caatatccctaccaactgagctaagctcacggggat 18694782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 19281640 - 19281605
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  19281640 caatatccctaccaactgagctaagctcacggggat 19281605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 19684105 - 19684070
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  19684105 caatatccctaccaactgagctaagctcacggggat 19684070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 22653682 - 22653717
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  22653682 caatatccctaccaactgagctaagctcacggggat 22653717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 25857333 - 25857368
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  25857333 caatatccctaccaactgagctaagctcacggggat 25857368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 27297207 - 27297172
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  27297207 caatatccctaccaactgagctaagctcacggggat 27297172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 33228971 - 33229006
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  33228971 caatatccctaccaactgagctaagctcacggggat 33229006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 38400342 - 38400307
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  38400342 caatatccctaccaactgagctaagctcacggggat 38400307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 44948628 - 44948593
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  44948628 caatatccctaccaactgagctaagctcacggggat 44948593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 11050796 - 11050830
Alignment:
Q  18 aatatccctgccaactgagctaagctcacggggat 52  Q
    ||||||||| |||||||||||||||||||||||||    
T  11050796 aatatccctaccaactgagctaagctcacggggat 11050830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 43895943 - 43895909
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||| ||||||||||||||||||||||||||    
T  43895943 atatccctaccaactgagctaagctcacggggatt 43895909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 51
Target Start/End: Complemental strand, 2304313 - 2304284
Alignment:
Q  22 tccctgccaactgagctaagctcacgggga 51  Q
    ||||||||||||||||||||||||||||||    
T  2304313 tccctgccaactgagctaagctcacgggga 2304284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 5612986 - 5612957
Alignment:
Q  17 caatatccctgccaactgagctaagctcac 46  Q
    ||||||||||||||||||||||||||||||    
T  5612986 caatatccctgccaactgagctaagctcac 5612957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 34614011 - 34613978
Alignment:
Q  17 caatatccctgccaactgagctaagctcacgggg 50  Q
    |||||||||| |||||||||||||||||||||||    
T  34614011 caatatccctaccaactgagctaagctcacgggg 34613978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 38525591 - 38525628
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||| | |||||||||||||||||||||||||||    
T  38525591 caatatccttaccaactgagctaagctcacggggattg 38525628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 44822453 - 44822420
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  44822453 atatccctaccaactgagctaagctcacggggat 44822420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 1844849 - 1844813
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| |||||||||||||||| |||||||||    
T  1844849 caatatccctaccaactgagctaagcttacggggatt 1844813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 2806539 - 2806571
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  2806539 caatatccctaccaactgagctaagctcacggg 2806571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 33233260 - 33233296
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  33233260 caatatccctaccaactgagataagctcacggggatt 33233296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 44857272 - 44857308
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| |||||||||||||||||||| |||||    
T  44857272 caatatccctaccaactgagctaagctcacgaggatt 44857308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 45333749 - 45333785
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||||||||||||||||||||||||||||||    
T  45333749 caatatccctgccaactgagctaagctcacggggatt 45333785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 21265688 - 21265650
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattgt 55  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  21265688 caatatccctaccaactgagctaagctcacggggattgt 21265650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 1836534 - 1836498
Alignment:
Q  18 aatatccctgccaactgagctaagctcacggggattg 54  Q
    ||||||||| |||||||||||||||||||||||||||    
T  1836534 aatatccctaccaactgagctaagctcacggggattg 1836498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 10664832 - 10664868
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10664832 caatatccctaccaactgagctaagctcacggggatt 10664868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 17671450 - 17671486
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggattgt 55  Q
    |||||||| ||||||||||||||||||||||||||||    
T  17671450 atatccctaccaactgagctaagctcacggggattgt 17671486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 32594283 - 32594247
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  32594283 caatatccctaccaactgagctaagctcacggggatt 32594247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 33207237 - 33207201
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  33207237 caatatccctaccaactgagctaagctcacggggatt 33207201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 42054365 - 42054329
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  42054365 caatatccctaccaactgagctaagctcacggggatt 42054329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 51050222 - 51050186
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  51050222 caatatccctaccaactgagctaagctcacggggatt 51050186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 1151791 - 1151756
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  1151791 caatatccctaccaactgagctaagctcacggggat 1151756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 1570230 - 1570265
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  1570230 caatatccctaccaactgagctaagctcacggggat 1570265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 3269651 - 3269616
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  3269651 caatatccctaccaactgagctaagctcacggggat 3269616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 4482636 - 4482671
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  4482636 caatatccctaccaactgagctaagctcacggggat 4482671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 6438102 - 6438137
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  6438102 caatatccctaccaactgagctaagctcacggggat 6438137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 6702608 - 6702573
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  6702608 caatatccctaccaactgagctaagctcacggggat 6702573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 6893275 - 6893310
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  6893275 caatatccctaccaactgagctaagctcacggggat 6893310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 7166265 - 7166300
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  7166265 caatatccctaccaactgagctaagctcacggggat 7166300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 8865886 - 8865851
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  8865886 caatatccctaccaactgagctaagctcacggggat 8865851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 15819639 - 15819674
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  15819639 caatatccctaccaactgagctaagctcacggggat 15819674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 22563418 - 22563383
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  22563418 caatatccctaccaactgagctaagctcacggggat 22563383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 25999882 - 25999847
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  25999882 caatatccctaccaactgagctaagctcacggggat 25999847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 26584784 - 26584819
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  26584784 caatatccctaccaactgagctaagctcacggggat 26584819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 33254760 - 33254725
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  33254760 caatatccctaccaactgagctaagctcacggggat 33254725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 33274932 - 33274897
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  33274932 caatatccctaccaactgagctaagctcacggggat 33274897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 35605661 - 35605696
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  35605661 caatatccctaccaactgagctaagctcacggggat 35605696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 40519582 - 40519617
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  40519582 caatatccctaccaactgagctaagctcacggggat 40519617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 42490448 - 42490483
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  42490448 caatatccctaccaactgagctaagctcacggggat 42490483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 46965772 - 46965737
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  46965772 caatatccctaccaactgagctaagctcacggggat 46965737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 48638564 - 48638529
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  48638564 caatatccctaccaactgagctaagctcacggggat 48638529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 50899548 - 50899583
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  50899548 caatatccctaccaactgagctaagctcacggggat 50899583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 18216937 - 18216903
Alignment:
Q  18 aatatccctgccaactgagctaagctcacggggat 52  Q
    ||||||||| |||||||||||||||||||||||||    
T  18216937 aatatccctaccaactgagctaagctcacggggat 18216903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 47469111 - 47469145
Alignment:
Q  17 caatatccctgccaactgagctaagctcacgggga 51  Q
    |||| ||||||||||||||||||||||||||||||    
T  47469111 caatgtccctgccaactgagctaagctcacgggga 47469145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 13773200 - 13773159
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattgtgac 58  Q
    |||||||||| ||||||||||||| ||||||||||| |||||    
T  13773200 caatatccctaccaactgagctaaactcacggggatagtgac 13773159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 16343060 - 16343027
Alignment:
Q  17 caatatccctgccaactgagctaagctcacgggg 50  Q
    |||||||||| |||||||||||||||||||||||    
T  16343060 caatatccctaccaactgagctaagctcacgggg 16343027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 51
Target Start/End: Complemental strand, 42908795 - 42908766
Alignment:
Q  22 tccctgccaactgagctaagctcacgggga 51  Q
    ||||||||||||||||||||||||||||||    
T  42908795 tccctgccaactgagctaagctcacgggga 42908766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 6463074 - 6463110
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| |||||||||||||||||| |||||||    
T  6463074 caatatccctaccaactgagctaagctcatggggatt 6463110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 9866222 - 9866254
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  9866222 caatatccctaccaactgagctaagctcacggg 9866254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 16526215 - 16526251
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| |||| |||||||||||||||||||||    
T  16526215 caatatccctaccaattgagctaagctcacggggatt 16526251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 24875003 - 24874971
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  24875003 caatatccctaccaactgagctaagctcacggg 24874971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 34058246 - 34058210
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  34058246 caatatccctaccaactgagctaagctcacggagatt 34058210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 37662595 - 37662631
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| |||||||||||||||||||| |||||    
T  37662595 caatatccctaccaactgagctaagctcacgaggatt 37662631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 40520862 - 40520826
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  40520862 caatatccctaccaactgagctaaactcacggggatt 40520826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000007; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 42443721 - 42443683
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattgt 55  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  42443721 caatatccctaccaactgagctaagctcacggggattgt 42443683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 2229007 - 2228970
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||||| |||||||||||||||||||||||||||    
T  2229007 caatatccctaccaactgagctaagctcacggggattg 2228970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 47999812 - 47999775
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||||| |||||||||||||||||||||||||||    
T  47999812 caatatccctaccaactgagctaagctcacggggattg 47999775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 27424871 - 27424835
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  27424871 caatatcccttccaactgagctaagctcacggggatt 27424835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 37300137 - 37300173
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  37300137 caatatccctaccaactgagctaagctcacggggatt 37300173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 2681128 - 2681093
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  2681128 caatatccctaccaactgagctaagctcacggggat 2681093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 5990183 - 5990218
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  5990183 caatatccctaccaactgagctaagctcacggggat 5990218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 9877305 - 9877340
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  9877305 caatatccctaccaactgagctaagctcacggggat 9877340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 10244927 - 10244962
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  10244927 caatatccctaccaactgagctaagctcacggggat 10244962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 12640627 - 12640662
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  12640627 caatatccctaccaactgagctaagctcacggggat 12640662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 15238921 - 15238886
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  15238921 caatatccctaccaactgagctaagctcacggggat 15238886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 19753006 - 19753041
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  19753006 caatatccctaccaactgagctaagctcacggggat 19753041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 23102596 - 23102631
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  23102596 caatatccctaccaactgagctaagctcacggggat 23102631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 25833587 - 25833552
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  25833587 caatatccctaccaactgagctaagctcacggggat 25833552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 29617437 - 29617402
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  29617437 caatatccctaccaactgagctaagctcacggggat 29617402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 35950160 - 35950125
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  35950160 caatatccctaccaactgagctaagctcacggggat 35950125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 36389704 - 36389739
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  36389704 caatatccctaccaactgagctaagctcacggggat 36389739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 44616634 - 44616599
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  44616634 caatatccctaccaactgagctaagctcacggggat 44616599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 47641077 - 47641042
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  47641077 caatatccctaccaactgagctaagctcacggggat 47641042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 36469744 - 36469778
Alignment:
Q  18 aatatccctgccaactgagctaagctcacggggat 52  Q
    ||||||||| |||||||||||||||||||||||||    
T  36469744 aatatccctaccaactgagctaagctcacggggat 36469778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 41854029 - 41853995
Alignment:
Q  17 caatatccctgccaactgagctaagctcacgggga 51  Q
    |||| ||||||||||||||||||||||||||||||    
T  41854029 caatgtccctgccaactgagctaagctcacgggga 41853995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 31026251 - 31026214
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  31026251 caatatccctaccaactgagctacgctcacggggattg 31026214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 32074435 - 32074468
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  32074435 atatccctaccaactgagctaagctcacggggat 32074468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 35815868 - 35815835
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  35815868 atatccctaccaactgagctaagctcacggggat 35815835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 9233799 - 9233835
Alignment:
Q  16 tcaatatccctgccaactgagctaagctcacggggat 52  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  9233799 tcaatatccctaccaactgagttaagctcacggggat 9233835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 9929941 - 9929977
Alignment:
Q  16 tcaatatccctgccaactgagctaagctcacggggat 52  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  9929941 tcaatatccctaccaactgagctaagctaacggggat 9929977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 24781062 - 24781030
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  24781062 caatatccctaccaactgagctaagctcacggg 24781030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 27510295 - 27510327
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  27510295 caatatccctaccaactgagctaagctcacggg 27510327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 30806147 - 30806111
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  30806147 caatatccctaccaactgagctaaactcacggggatt 30806111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 36174422 - 36174386
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  36174422 caatatccctaccaactgagctaagctcacggagatt 36174386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 36391942 - 36391974
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  36391942 caatatccctaccaactgagctaagctcacggg 36391974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 41084071 - 41084035
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  41084071 caatatccctaccaactgagctaagctcacggcgatt 41084035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 46534786 - 46534822
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| |||||||||||||||||| |||||||    
T  46534786 caatatccctaccaactgagctaagctcatggggatt 46534822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000003; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 1503944 - 1503907
Alignment:
Q  15 atcaatatccctgccaactgagctaagctcacggggat 52  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  1503944 atcaatatccctgccaactgagctaagctcatggggat 1503907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 10736912 - 10736949
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||||| |||||||||||||||||||||||||||    
T  10736912 caatatccctaccaactgagctaagctcacggggattg 10736949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 26022279 - 26022242
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||||| |||||||||||||||||||||||||||    
T  26022279 caatatccctaccaactgagctaagctcacggggattg 26022242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 33604208 - 33604245
Alignment:
Q  15 atcaatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||||| |||||||||||||||||||||||||    
T  33604208 atcaatatccctaccaactgagctaagctcacggggat 33604245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 6280513 - 6280477
Alignment:
Q  16 tcaatatccctgccaactgagctaagctcacggggat 52  Q
    ||||||||||| |||||||||||||||||||||||||    
T  6280513 tcaatatccctaccaactgagctaagctcacggggat 6280477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 11875918 - 11875882
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  11875918 caatatccctaccaactgagctaagctcacggggatt 11875882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 11890925 - 11890889
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  11890925 caatatccctaccaactgagctaagctcacggggatt 11890889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 16449157 - 16449121
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  16449157 caatatccctaccaactgagctaagctcacggggatt 16449121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 28909497 - 28909461
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  28909497 caatatccctaccaactgagctaagctcacggggatt 28909461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 34413094 - 34413058
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  34413094 caatatccctaccaactgagctaagctcacggggatt 34413058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 12263 - 12298
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  12263 caatatccctaccaactgagctaagctcacggggat 12298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 94549 - 94584
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  94549 caatatccctaccaactgagctaagctcacggggat 94584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 1937342 - 1937307
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  1937342 caatatccctaccaactgagctaagctcacggggat 1937307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 8265300 - 8265265
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  8265300 caatatccctaccaactgagctaagctcacggggat 8265265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 17027918 - 17027953
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  17027918 caatatccctaccaactgagctaagctcacggggat 17027953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 17558354 - 17558389
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  17558354 caatatccctaccaactgagctaagctcacggggat 17558389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 17698554 - 17698519
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  17698554 caatatccctaccaactgagctaagctcacggggat 17698519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 24458349 - 24458314
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  24458349 caatatcccttccaactgagctaagctcacggggat 24458314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 29514658 - 29514623
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  29514658 caatatccctaccaactgagctaagctcacggggat 29514623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 29716892 - 29716857
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  29716892 caatatccctaccaactgagctaagctcacggggat 29716857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 30972855 - 30972890
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  30972855 caatatccctaccaactgagctaagctcacggggat 30972890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 32719645 - 32719680
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  32719645 caatatccctaccaactgagctaagctcacggggat 32719680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 35939519 - 35939484
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  35939519 caatatccctaccaactgagctaagctcacggggat 35939484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 38745317 - 38745352
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  38745317 caatatccctaccaactgagctaagctcacggggat 38745352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 39362297 - 39362262
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  39362297 caatatccctaccaactgagctaagctcacggggat 39362262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 41689914 - 41689879
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  41689914 caatatccctaccaactgagctaagctcacggggat 41689879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 43656068 - 43656033
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  43656068 caatatccctaccaactgagctaagctcacggggat 43656033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 44340383 - 44340418
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  44340383 caatatccctaccaactgagctaagctcacggggat 44340418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 2168486 - 2168520
Alignment:
Q  18 aatatccctgccaactgagctaagctcacggggat 52  Q
    ||||||||| |||||||||||||||||||||||||    
T  2168486 aatatccctaccaactgagctaagctcacggggat 2168520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 7797163 - 7797125
Alignment:
Q  16 tcaatatccctgccaactgagctaagctcacggggattg 54  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  7797163 tcaatatccctaccaactgagctaagcttacggggattg 7797125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 7816436 - 7816398
Alignment:
Q  16 tcaatatccctgccaactgagctaagctcacggggattg 54  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  7816436 tcaatatccctaccaactgagctaagcttacggggattg 7816398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 9187262 - 9187296
Alignment:
Q  18 aatatccctgccaactgagctaagctcacggggat 52  Q
    ||||||||| |||||||||||||||||||||||||    
T  9187262 aatatccctaccaactgagctaagctcacggggat 9187296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 23178929 - 23178963
Alignment:
Q  17 caatatccctgccaactgagctaagctcacgggga 51  Q
    |||||||||| ||||||||||||||||||||||||    
T  23178929 caatatccctaccaactgagctaagctcacgggga 23178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 257569 - 257536
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  257569 atatccctaccaactgagctaagctcacggggat 257536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 658351 - 658384
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  658351 atatccctaccaactgagctaagctcacggggat 658384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 844087 - 844120
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  844087 atatccctaccaactgagctaagctcacggggat 844120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 34894401 - 34894364
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  34894401 caatatccctaccaactgagctaagcttacggggattg 34894364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 43085263 - 43085296
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  43085263 atatccctcccaactgagctaagctcacggggat 43085296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 2787119 - 2787155
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  2787119 caatatccctaccaactgagctaagctcacggagatt 2787155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 2792811 - 2792775
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    ||||||||||  |||||||||||||||||||||||||    
T  2792811 caatatccctatcaactgagctaagctcacggggatt 2792775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 20540144 - 20540180
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    ||||||||||  |||||||||||||||||||||||||    
T  20540144 caatatccctaacaactgagctaagctcacggggatt 20540180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 26280822 - 26280858
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  26280822 caatatccctaccaactgagttaagctcacggggatt 26280858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 34158695 - 34158727
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  34158695 caatatccctaccaactgagctaagctcacggg 34158727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 36540319 - 36540283
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  36540319 caatatccctaccaactgagttaagctcacggggatt 36540283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 37092123 - 37092087
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  37092123 caatatccctaccaactgagctaaactcacggggatt 37092087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 37717395 - 37717359
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  37717395 caatatccctaccaactgagttaagctcacggggatt 37717359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 43284004 - 43284040
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  43284004 caatatccctaccaactgagctaaactcacggggatt 43284040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 4408390 - 4408353
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4408390 caatatccctaccaactgagctaagctcacggggattg 4408353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 8857121 - 8857084
Alignment:
Q  18 aatatccctgccaactgagctaagctcacggggattgt 55  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  8857121 aatatccctaccaactgagctaagctcacggggattgt 8857084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 19953866 - 19953903
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||||| |||||||||||||||||||||||||||    
T  19953866 caatatccctaccaactgagctaagctcacggggattg 19953903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 17441877 - 17441913
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  17441877 caatatccctaccaactgagctaagctcacggggatt 17441913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 607219 - 607184
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  607219 caatatccctaccaactgagctaagctcacggggat 607184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 3794211 - 3794246
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  3794211 caatatccctaccaactgagctaagctcacggggat 3794246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 7177327 - 7177292
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  7177327 caatatccctaccaactgagctaagctcacggggat 7177292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 7207876 - 7207841
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  7207876 caatatccctaccaactgagctaagctcacggggat 7207841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 7545361 - 7545326
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  7545361 caatatccctaccaactgagctaagctcacggggat 7545326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 7865393 - 7865428
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  7865393 caatatccctaccaactgagctaagctcacggggat 7865428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 9246420 - 9246455
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  9246420 caatatccctaccaactgagctaagctcacggggat 9246455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 9372239 - 9372274
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  9372239 caatatccctaccaactgagctaagctcacggggat 9372274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 9435658 - 9435623
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  9435658 caatatccctaccaactgagctaagctcacggggat 9435623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 10934631 - 10934596
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  10934631 caatatccctaccaactgagctaagctcacggggat 10934596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 15091480 - 15091445
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  15091480 caatatccctaccaactgagctaagctcacggggat 15091445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 30885608 - 30885643
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  30885608 caatatccctaccaactgagctaagctcacggggat 30885643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 33573849 - 33573814
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  33573849 caatatccctaccaactgagctaagctcacggggat 33573814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 1969027 - 1968993
Alignment:
Q  18 aatatccctgccaactgagctaagctcacggggat 52  Q
    ||||||||| |||||||||||||||||||||||||    
T  1969027 aatatccctaccaactgagctaagctcacggggat 1968993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 2251870 - 2251837
Alignment:
Q  17 caatatccctgccaactgagctaagctcacgggg 50  Q
    |||||||||| |||||||||||||||||||||||    
T  2251870 caatatccctaccaactgagctaagctcacgggg 2251837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 21248564 - 21248527
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  21248564 caatatccctaccaactgagctaagcttacggggattg 21248527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 22574900 - 22574867
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  22574900 atatccctaccaactgagctaagctcacggggat 22574867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 22997369 - 22997332
Alignment:
Q  16 tcaatatccctgccaactgagctaagctcacggggatt 53  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  22997369 tcaatatccctaccaactgagctaagctcacggagatt 22997332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 23791032 - 23791069
Alignment:
Q  16 tcaatatccctgccaactgagctaagctcacggggatt 53  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  23791032 tcaatatccctaccaactgagctaagctcacggagatt 23791069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 3640546 - 3640510
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| |||||||||||||||||||| |||||    
T  3640546 caatatccctaccaactgagctaagctcacgaggatt 3640510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 8439707 - 8439675
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  8439707 caatatccctaccaactgagctaagctcacggg 8439675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 19892314 - 19892350
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| |||||||| |||||||||||||||||    
T  19892314 caatatccctaccaactgaactaagctcacggggatt 19892350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 30391258 - 30391294
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    ||||||||||  |||||||||||||||||||||||||    
T  30391258 caatatccctaacaactgagctaagctcacggggatt 30391294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 30704992 - 30704956
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| |||||||| |||||||||||||||||    
T  30704992 caatatccctaccaactgaactaagctcacggggatt 30704956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 31705931 - 31705895
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||| | ||||||||||||||||||||||||||    
T  31705931 caatatccataccaactgagctaagctcacggggatt 31705895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 46105567 - 46105530
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||||| |||||||||||||||||||||||||||    
T  46105567 caatatccctaccaactgagctaagctcacggggattg 46105530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 8433661 - 8433697
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  8433661 caatatccctaccaactgagctaagctcacggggatt 8433697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 8965126 - 8965090
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  8965126 caatatccctaccaactgagctaagctcacggggatt 8965090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 40051654 - 40051614
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattgtga 57  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  40051654 caatatccctaccaactgagctaagctcacggggatggtga 40051614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 43147422 - 43147458
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  43147422 caatatccctaccaactgagctaagctcacggggatt 43147458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 43207701 - 43207665
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  43207701 caatatccctaccaactgagctaagctcacggggatt 43207665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 48798311 - 48798275
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  48798311 caatatccctaccaactgagctaagctcacggggatt 48798275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 3847713 - 3847678
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  3847713 caatatccctaccaactgagctaagctcacggggat 3847678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 6371146 - 6371111
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  6371146 caatatccctaccaactgagctaagctcacggggat 6371111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 9761147 - 9761108
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattgtg 56  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  9761147 caatatccctaccaactgaggtaagctcacggggattgtg 9761108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 23705191 - 23705226
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  23705191 caatatccctaccaactgagctaagctcacggggat 23705226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 24680124 - 24680159
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  24680124 caatatccctaccaactgagctaagctcacggggat 24680159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 26868381 - 26868346
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  26868381 caatatccctaccaactgagctaagctcacggggat 26868346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 26919506 - 26919541
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  26919506 caatatccctaccaactgagctaagctcacggggat 26919541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 35219538 - 35219573
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  35219538 caatatccctaccaactgagctaagctcacggggat 35219573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 35465467 - 35465432
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  35465467 caatatccctaccaactgagctaagctcacggggat 35465432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 37935893 - 37935858
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  37935893 caatatccctaccaactgagctaagctcacggggat 37935858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 39023207 - 39023172
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  39023207 caatatccctaccaactgagctaagctcacggggat 39023172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 43596927 - 43596892
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  43596927 caatatccctaccaactgagctaagctcacggggat 43596892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 44602517 - 44602482
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  44602517 caatatccctaccaactgagctaagctcacggggat 44602482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 45126164 - 45126129
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  45126164 caatatccctaccaactgagctaagctcacggggat 45126129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 45849079 - 45849044
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  45849079 caatatccctaccaactgagctaagctcacggggat 45849044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 46775068 - 46775103
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  46775068 caatatccctaccaactgagctaagctcacggggat 46775103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 48569214 - 48569249
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  48569214 caatatccctaccaactgagctaagctcacggggat 48569249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 49901514 - 49901479
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  49901514 caatatccctaccaactgagctaagctcacggggat 49901479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 52757316 - 52757351
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||| |||||||||||||||||||||||||||||    
T  52757316 caatattcctgccaactgagctaagctcacggggat 52757351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 55251389 - 55251424
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  55251389 caatatccctaccaactgagctaagctcacggggat 55251424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Original strand, 3764047 - 3764081
Alignment:
Q  18 aatatccctgccaactgagctaagctcacggggat 52  Q
    ||||||||| |||||||||||||||||||||||||    
T  3764047 aatatccctaccaactgagctaagctcacggggat 3764081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 52015523 - 52015489
Alignment:
Q  17 caatatccctgccaactgagctaagctcacgggga 51  Q
    |||| ||||||||||||||||||||||||||||||    
T  52015523 caatgtccctgccaactgagctaagctcacgggga 52015489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 18360523 - 18360490
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  18360523 atatccctaccaactgagctaagctcacggggat 18360490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 36602406 - 36602439
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  36602406 atatccctaccaactgagctaagctcacggggat 36602439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 47934112 - 47934145
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  47934112 atatccctaccaactgagctaagctcacggggat 47934145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 51890829 - 51890796
Alignment:
Q  17 caatatccctgccaactgagctaagctcacgggg 50  Q
    |||| |||||||||||||||||||||||||||||    
T  51890829 caatgtccctgccaactgagctaagctcacgggg 51890796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 55536412 - 55536375
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||| | |||||||||||||||||||||||||||    
T  55536412 caatatccttaccaactgagctaagctcacggggattg 55536375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 4958594 - 4958630
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| |||||||| |||||||||||||||||    
T  4958594 caatatccctaccaactgaactaagctcacggggatt 4958630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 22230472 - 22230504
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  22230472 caatatccctaccaactgagctaagctcacggg 22230504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 22788712 - 22788744
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  22788712 caatatccctaccaactgagctaagctcacggg 22788744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 24997472 - 24997504
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  24997472 caatatccctaccaactgagctaagctcacggg 24997504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 30217631 - 30217595
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  30217631 caatatccctaccaactgagctaagctcacggagatt 30217595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 31852381 - 31852349
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||| ||||||||||||||||||||||||||||    
T  31852381 caatgtccctgccaactgagctaagctcacggg 31852349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 34353811 - 34353775
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  34353811 caatatccctaccaactgagctaagctcacggagatt 34353775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 40994141 - 40994173
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  40994141 caatatccctaccaactgagctaagctcacggg 40994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 43978040 - 43978008
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  43978040 caatatccctaccaactgagctaagctcacggg 43978008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 31528995 - 31529032
Alignment:
Q  16 tcaatatccctgccaactgagctaagctcacggggatt 53  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  31528995 tcaatatccctaccaactgagctaagctcacggggatt 31529032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 3748640 - 3748676
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  3748640 caatatccctaccaactgagctaagctcacggggatt 3748676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 7269987 - 7269951
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  7269987 caatatccctaccaactgagctaagctcacggggatt 7269951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 7920352 - 7920316
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  7920352 caatatccctaccaactgagctaagctcacggggatt 7920316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 22501969 - 22502005
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  22501969 caatatccctaccaactgagctaagctcacggggatt 22502005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 46795967 - 46796003
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  46795967 caatatccctaccaactgagctaagctcacggggatt 46796003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 882421 - 882386
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  882421 caatatccctaccaactgagctaagctcacggggat 882386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 2522958 - 2522923
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  2522958 caatatccctaccaactgagctaagctcacggggat 2522923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 11820036 - 11820001
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  11820036 caatatccctaccaactgagctaagctcacggggat 11820001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 19550538 - 19550503
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  19550538 caatatccctaccaactgagctaagctcacggggat 19550503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 19999899 - 19999864
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  19999899 caatatccctaccaactgagctaagctcacggggat 19999864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 28550357 - 28550392
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  28550357 caatatccctaccaactgagctaagctcacggggat 28550392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 30555265 - 30555300
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  30555265 caatatccctaccaactgagctaagctcacggggat 30555300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 31327539 - 31327574
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  31327539 caatatccctaccaactgagctaagctcacggggat 31327574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 31327756 - 31327791
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  31327756 caatatccctaccaactgagctaagctcacggggat 31327791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 32256592 - 32256627
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  32256592 caatatccctaccaactgagctaagctcacggggat 32256627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 37800649 - 37800684
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  37800649 caatatccctaccaactgagctaagctcacggggat 37800684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 39300415 - 39300380
Alignment:
Q  18 aatatccctgccaactgagctaagctcacggggatt 53  Q
    ||||||||| ||||||||||||||||||||||||||    
T  39300415 aatatccctaccaactgagctaagctcacggggatt 39300380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 39966112 - 39966147
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  39966112 caatatccctaccaactgagctaagctcacggggat 39966147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 40192188 - 40192153
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  40192188 caatatccctaccaactgagctaagctcacggggat 40192153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 40548335 - 40548300
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  40548335 caatatccctaccaactgagctaagctcacggggat 40548300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 40933869 - 40933904
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  40933869 caatatccctaccaactgagctaagctcacggggat 40933904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 44652020 - 44652055
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  44652020 caatatccctaccaactgagctaagctcacggggat 44652055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 45701376 - 45701341
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  45701376 caatatccctaccaactgagctaagctcacggggat 45701341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 48739782 - 48739817
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  48739782 caatatccctaccaactgagctaagctcacggggat 48739817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 50496852 - 50496887
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  50496852 caatatccctaccaactgagctaagctcacggggat 50496887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 52410279 - 52410314
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  52410279 caatatccctaccaactgagctaagctcacggggat 52410314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 52945927 - 52945892
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  52945927 caatatccctaccaactgagctaagctcacggggat 52945892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 53163626 - 53163591
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  53163626 caatatccctaccaactgagctaagctcacggggat 53163591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 53347328 - 53347363
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  53347328 caatatccctaccaactgagctaagctcacggggat 53347363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 19996490 - 19996528
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattgt 55  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  19996490 caatatccctaccaactgagctacgctcacggggattgt 19996528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 24303422 - 24303388
Alignment:
Q  17 caatatccctgccaactgagctaagctcacgggga 51  Q
    |||| ||||||||||||||||||||||||||||||    
T  24303422 caatgtccctgccaactgagctaagctcacgggga 24303388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 45551849 - 45551883
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||| ||||||||||||||||||||||||||    
T  45551849 atatccctaccaactgagctaagctcacggggatt 45551883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 6920001 - 6920034
Alignment:
Q  17 caatatccctgccaactgagctaagctcacgggg 50  Q
    |||||||||| |||||||||||||||||||||||    
T  6920001 caatatccctaccaactgagctaagctcacgggg 6920034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 33225388 - 33225421
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  33225388 atatccctaccaactgagctaagctcacggggat 33225421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 34102649 - 34102686
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||||| |||||||| ||||||||||||||||||    
T  34102649 caatatccctaccaactgaactaagctcacggggattg 34102686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 37488500 - 37488533
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  37488500 atatccctaccaactgagctaagctcacggggat 37488533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 4139032 - 4139000
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  4139032 caatatccctaccaactgagctaagctcacggg 4139000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 9176624 - 9176656
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  9176624 caatatccctaccaactgagctaagctcacggg 9176656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 10176941 - 10176977
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  10176941 caatatccctaccaactgagctaacctcacggggatt 10176977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 13638284 - 13638320
Alignment:
Q  18 aatatccctgccaactgagctaagctcacggggattg 54  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  13638284 aatatccctaccaactgaactaagctcacggggattg 13638320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 34757561 - 34757529
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  34757561 caatatccctaccaactgagctaagctcacggg 34757529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 36666493 - 36666457
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||| |||||||||||| |||||||||||||||||    
T  36666493 caatattcctgccaactgaactaagctcacggggatt 36666457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 45871049 - 45871013
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  45871049 caatatccctaccaactgagctaaactcacggggatt 45871013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 47098764 - 47098732
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  47098764 caatatccctaccaactgagctaagctcacggg 47098732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 52046423 - 52046455
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  52046423 caatatccctaccaactgagctaagctcacggg 52046455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 8853 - 8817
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  8853 caatatccctaccaactgagctaagctcacggggatt 8817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 10864 - 10900
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10864 caatatccctaccaactgagctaagctcacggggatt 10900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 58 - 93
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  58 caatatccctaccaactgagctaagctcacggggat 93  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 8998 - 8963
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  8998 caatatccctaccaactgagctaagctcacggggat 8963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 4052 - 4087
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  4052 caatatccctaccaactgagctaagctcacggggat 4087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 17652 - 17617
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  17652 caatatccctaccaactgagctaagctcacggggat 17617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 46558 - 46523
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  46558 caatatccctaccaactgagctaagctcacggggat 46523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 45916 - 45881
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  45916 caatatccctaccaactgagctaagctcacggggat 45881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 59815 - 59780
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  59815 caatatccctaccaactgagctaagctcacggggat 59780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 266735 - 266770
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  266735 caatatccctaccaactgagctaagctcacggggat 266770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 8863 - 8898
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  8863 caatatccctaccaactgagctaagctcacggggat 8898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000004; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 1743159 - 1743124
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  1743159 caatatccctaccaactgagctaagctcacggggat 1743124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 2848245 - 2848210
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  2848245 caatatccctaccaactgagctaagctcacggggat 2848210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 4417723 - 4417758
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  4417723 caatatccctaccaactgagctaagctcacggggat 4417758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 6518814 - 6518849
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  6518814 caatatccctaccaactgagctaagctcacggggat 6518849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 9835065 - 9835030
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  9835065 caatatccctaccaactgagctaagctcacggggat 9835030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 11897280 - 11897245
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  11897280 caatatccctaccaactgagctaagctcacggggat 11897245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 12463788 - 12463753
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  12463788 caatatccctaccaactgagctaagctcacggggat 12463753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 12891589 - 12891554
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  12891589 caatatccctaccaactgagctaagctcacggggat 12891554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 16603430 - 16603395
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  16603430 caatatccctaccaactgagctaagctcacggggat 16603395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 17545210 - 17545245
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  17545210 caatatccctaccaactgagctaagctcacggggat 17545245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 21918084 - 21918049
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  21918084 caatatccctaccaactgagctaagctcacggggat 21918049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 21962143 - 21962178
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||||||||||||| |||||||||||||||    
T  21962143 caatatccctgccaactgagttaagctcacggggat 21962178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 25648123 - 25648158
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  25648123 caatatccctaccaactgagctaagctcacggggat 25648158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 27765289 - 27765254
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  27765289 caatatccctaccaactgagctaagctcacggggat 27765254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 29713414 - 29713449
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  29713414 caatatccctaccaactgagctaagctcacggggat 29713449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 32505720 - 32505685
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  32505720 caatatccctaccaactgagctaagctcacggggat 32505685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 32706353 - 32706318
Alignment:
Q  18 aatatccctgccaactgagctaagctcacggggatt 53  Q
    ||||||||| ||||||||||||||||||||||||||    
T  32706353 aatatccctaccaactgagctaagctcacggggatt 32706318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 41179841 - 41179876
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  41179841 caatatccctaccaactgagctaagctcacggggat 41179876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 42320349 - 42320314
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  42320349 caatatccctaccaactgagctaagctcacggggat 42320314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 17 - 52
Target Start/End: Complemental strand, 42916421 - 42916386
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggat 52  Q
    |||||||||| |||||||||||||||||||||||||    
T  42916421 caatatccctaccaactgagctaagctcacggggat 42916386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 24033109 - 24033071
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattgt 55  Q
    |||||||||| ||||||||||||||||| ||||||||||    
T  24033109 caatatccctaccaactgagctaagctcgcggggattgt 24033071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 2328624 - 2328587
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  2328624 caatatccctaccaactaagctaagctcacggggattg 2328587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 4745914 - 4745947
Alignment:
Q  17 caatatccctgccaactgagctaagctcacgggg 50  Q
    |||||||||| |||||||||||||||||||||||    
T  4745914 caatatccctaccaactgagctaagctcacgggg 4745947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 11795537 - 11795500
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggattgtg 56  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  11795537 atatccctaccaactgagctaagctcacagggattgtg 11795500  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 13621986 - 13622019
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  13621986 atatccctaccaactgagctaagctcacggggat 13622019  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 21749418 - 21749451
Alignment:
Q  20 tatccctgccaactgagctaagctcacggggatt 53  Q
    ||||||| ||||||||||||||||||||||||||    
T  21749418 tatccctaccaactgagctaagctcacggggatt 21749451  T

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Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 50
Target Start/End: Original strand, 25472621 - 25472654
Alignment:
Q  17 caatatccctgccaactgagctaagctcacgggg 50  Q
    |||||||||| |||||||||||||||||||||||    
T  25472621 caatatccctaccaactgagctaagctcacgggg 25472654  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 25729480 - 25729513
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  25729480 atatccctaccaactgagctaagctcacggggat 25729513  T

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Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 41477398 - 41477431
Alignment:
Q  19 atatccctgccaactgagctaagctcacggggat 52  Q
    |||||||| |||||||||||||||||||||||||    
T  41477398 atatccctaccaactgagctaagctcacggggat 41477431  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 5966861 - 5966825
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| |||||||||||| |||||||||||||    
T  5966861 caatatccctaccaactgagctacgctcacggggatt 5966825  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 18815380 - 18815344
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||| | ||||||||||||||||||||||||||    
T  18815380 caatatccttaccaactgagctaagctcacggggatt 18815344  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 18993500 - 18993536
Alignment:
Q  18 aatatccctgccaactgagctaagctcacggggattg 54  Q
    |||||||||  ||||||||||||||||||||||||||    
T  18993500 aatatccctatcaactgagctaagctcacggggattg 18993536  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 23292455 - 23292487
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  23292455 caatatccctaccaactgagctaagctcacggg 23292487  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 25660939 - 25660907
Alignment:
Q  19 atatccctgccaactgagctaagctcacgggga 51  Q
    ||||||||||||||||||||| |||||||||||    
T  25660939 atatccctgccaactgagctatgctcacgggga 25660907  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 35515544 - 35515512
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  35515544 caatatccctaccaactgagctaagctcacggg 35515512  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 42525432 - 42525396
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| ||||||||||||| ||||||||||||    
T  42525432 caatatccctaccaactgagctaaactcacggggatt 42525396  T

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Target: scaffold0460 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 12491 - 12455
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggggatt 53  Q
    |||||||||| |||||||||||| |||||||||||||    
T  12491 caatatccctaccaactgagctacgctcacggggatt 12455  T

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Target: scaffold0366 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 898 - 930
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  898 caatatccctaccaactgagctaagctcacggg 930  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 12299 - 12331
Alignment:
Q  17 caatatccctgccaactgagctaagctcacggg 49  Q
    |||||||||| ||||||||||||||||||||||    
T  12299 caatatccctaccaactgagctaagctcacggg 12331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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