View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17303_high_29 (Length: 331)
Name: NF17303_high_29
Description: NF17303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17303_high_29 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 303
Target Start/End: Original strand, 28812752 - 28813040
Alignment:
| Q |
17 |
atcaagatggacctgaagtgtggcagcgttatgagaacattgttgtagctgtgaatgaaattctatcaagaatatgatagtgttttgaaatcaaatgtag |
116 |
Q |
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| T |
28812752 |
atcaagatggacctgaagtgtggcagcgttatgagaacattgttgtagctgtgaatgaaattctatcaagaatatgatagtgttttgaaatcaaatgtag |
28812851 |
T |
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| Q |
117 |
ctgaatgaagaaaaaggttcttgtttatatcatcaatttgttcattgagagttagctaagaatgttgagtgtctaaattgtaaaata---ggtgatagta |
213 |
Q |
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| T |
28812852 |
ctgaatgaagaaaaaggttcttgtttatatcatcaatttgttcattgagagttagctaagaatgttgagtgtctaaattgtaaaataggtggtgatagta |
28812951 |
T |
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| Q |
214 |
aaatggtgctnnnnnnnnngttaggtgagataactcacactagttcattcttgacaggcgcatgctttttcatagtgagtcaatttccat |
303 |
Q |
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| T |
28812952 |
aaatggtgctaaaataaaa-ttacgttagttaactcacgctaattcattcttgacagccgcatgctttttcatagtgagtcaatttccat |
28813040 |
T |
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