View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17303_high_52 (Length: 245)
Name: NF17303_high_52
Description: NF17303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17303_high_52 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 3355851 - 3356079
Alignment:
| Q |
1 |
aaaagctaaactctgtagcttttgaaaaatcacagtgactcaccagaaacccaagggctttatcttggaattcataggttagtagtatacaatgatttct |
100 |
Q |
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| T |
3355851 |
aaaagctaaactctgtagcttttgaaaaatcacagtgactcaccggaaacccaagggctttatcttggaattcataggttagtagtatacaatgatttct |
3355950 |
T |
|
| Q |
101 |
aatagcaaatttgagaatatcattacaatttgaatgcaaaatcataaattaactaaatcattatacacttgaatgcaggaatatttgacaattatttttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |
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| T |
3355951 |
aatagcaaatttgagaatatcattacaatttgaatgcaaaatcataaattaactaaatcattatacacctgaatgcaggaatatttgacaattattttag |
3356050 |
T |
|
| Q |
201 |
cctgaagaaaagcctcggaaccaaaacac |
229 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
3356051 |
cctgaagaaaagcctcggaaccaaaacac |
3356079 |
T |
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