View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17303_low_39 (Length: 286)
Name: NF17303_low_39
Description: NF17303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17303_low_39 |
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Alignment Details
Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 36363627 - 36363351
Alignment:
| Q |
1 |
attttgtttttatcttaaatttgttatgttatatttcactggctttcagttgatcagataagcatctaaatctaaatattatgcactaattttaatgttc |
100 |
Q |
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| T |
36363627 |
attttgtttttattttaaatttgttatgttatatttcactggctttcagttgatcagataagcatctaaatctaaatattatgcactaattttaatgttc |
36363528 |
T |
|
| Q |
101 |
aaatgaatgtcaatttattatgataaattcagaaaataaattccctccagttattttaactacctagaaacatgatccatgaaatgtcagcagctcaata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36363527 |
aaatgaatgtcaatttattatgataaattcagaaaataaattccctccagttattttaactacctagaaacatgatccatgaaatgtcagcagctcaata |
36363428 |
T |
|
| Q |
201 |
gcaagcgtttgaatttgtaacagggatgaaattcaaatcttttttaggatggtggttaaatagtactagtaatactc |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36363427 |
gcaagcgtttgaatttgtaacagggatgaaattcaaatcttttttaggatggtggttaaatagtactagtaatactc |
36363351 |
T |
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