View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17303_low_41 (Length: 284)

Name: NF17303_low_41
Description: NF17303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17303_low_41
NF17303_low_41
[»] chr3 (9 HSPs)
chr3 (1-179)||(26770949-26771129)
chr3 (179-273)||(26770394-26770488)
chr3 (2-150)||(34332806-34332954)
chr3 (2-150)||(40930519-40930667)
chr3 (26-160)||(35214354-35214486)
chr3 (26-160)||(29523724-29523860)
chr3 (26-114)||(11203844-11203932)
chr3 (2-150)||(2364278-2364426)
chr3 (2-150)||(7312777-7312925)
[»] chr2 (5 HSPs)
chr2 (1-179)||(17764922-17765102)
chr2 (26-150)||(41207041-41207165)
chr2 (6-179)||(28252725-28252900)
chr2 (26-153)||(38604362-38604489)
chr2 (2-150)||(4552170-4552318)
[»] chr6 (8 HSPs)
chr6 (1-175)||(15958777-15958953)
chr6 (26-150)||(18651225-18651349)
chr6 (2-108)||(2553638-2553744)
chr6 (57-150)||(24767415-24767508)
chr6 (2-154)||(14372978-14373130)
chr6 (26-160)||(21630086-21630222)
chr6 (26-160)||(20883012-20883148)
chr6 (26-114)||(17606361-17606449)
[»] chr1 (5 HSPs)
chr1 (3-179)||(47623037-47623215)
chr1 (2-150)||(51052481-51052629)
chr1 (2-150)||(11909096-11909244)
chr1 (26-114)||(16917836-16917924)
chr1 (26-114)||(43388392-43388480)
[»] scaffold0472 (1 HSPs)
scaffold0472 (22-150)||(3273-3401)
[»] chr7 (7 HSPs)
chr7 (2-150)||(11277243-11277391)
chr7 (2-150)||(47876984-47877132)
chr7 (26-150)||(235428-235552)
chr7 (2-169)||(17720636-17720805)
chr7 (22-106)||(29967996-29968080)
chr7 (49-114)||(25619507-25619572)
chr7 (2-150)||(4938119-4938267)
[»] chr5 (13 HSPs)
chr5 (26-150)||(42928156-42928280)
chr5 (2-150)||(23238385-23238533)
chr5 (2-150)||(28535666-28535814)
chr5 (3-108)||(8228028-8228133)
chr5 (2-150)||(12825200-12825348)
chr5 (26-160)||(8300161-8300297)
chr5 (2-150)||(30732305-30732453)
chr5 (50-150)||(35983782-35983882)
chr5 (26-160)||(33385353-33385489)
chr5 (26-160)||(18359071-18359207)
chr5 (26-160)||(27767067-27767203)
chr5 (26-114)||(25857451-25857539)
chr5 (74-150)||(31641584-31641660)
[»] chr4 (12 HSPs)
chr4 (5-179)||(11587158-11587334)
chr4 (2-150)||(7403914-7404062)
chr4 (26-114)||(45472736-45472824)
chr4 (26-109)||(55725718-55725801)
chr4 (3-107)||(19755269-19755373)
chr4 (3-107)||(19784433-19784537)
chr4 (26-108)||(15740246-15740328)
chr4 (2-104)||(47685932-47686034)
chr4 (2-119)||(1828562-1828679)
chr4 (84-153)||(19735735-19735804)
chr4 (2-150)||(13270882-13271030)
chr4 (2-150)||(23642582-23642730)
[»] chr8 (10 HSPs)
chr8 (2-150)||(13396389-13396537)
chr8 (2-104)||(32266565-32266667)
chr8 (5-94)||(34137010-34137099)
chr8 (26-160)||(37434157-37434293)
chr8 (26-150)||(2170367-2170491)
chr8 (2-150)||(9922602-9922750)
chr8 (26-153)||(13200148-13200275)
chr8 (2-150)||(7924387-7924535)
chr8 (26-114)||(20824321-20824409)
chr8 (50-150)||(41665360-41665460)
[»] scaffold0034 (1 HSPs)
scaffold0034 (2-150)||(105834-105982)


Alignment Details
Target: chr3 (Bit Score: 126; Significance: 5e-65; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 26771129 - 26770949
Alignment:
Q  1 accacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaac 100  Q
    ||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||||  ||| ||||||| |||||||||||| ||||||||||| ||||||    
T  26771129 accacggtttgccaaatttgctttcgtaggtaaacgatccctcaaaagccgccaagtaagaatagagactttaagaggagcctgtttatgccacattaac 26771030  T
Q  101 tccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcat--acaccacgaactgaatacccgccaccctga 179  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  26771029 tccatatttggatgtaactaaggatgttcctgtaatgttagcatgtcatacacaccacgaactgaatacccgccaccctga 26770949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 179 - 273
Target Start/End: Complemental strand, 26770488 - 26770394
Alignment:
Q  179 aaaaagtgaataactttaagataacgtggttcaatgagatccacaaaatacatatgggtggaaatatgctagtgcagtgctaactacgaaaatat 273  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26770488 aaaaagtgaataactttaagataacatggttcaatgagatccacaaaatacatatgggtggaaatatgctagtgcagtgctaactacgaaaatat 26770394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 34332954 - 34332806
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||   ||| |||||||| |||||||||| | |  ||||| |||| ||||| | ||| |||||| | ||||||||||| |||||||    
T  34332954 ccacggtttgccaaattattttttgtaggtaatcgatctctcagaagttgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaact 34332855  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||||||  |||||||||  || || |||||| |||| |||||||||||    
T  34332854 ccatattatgatgtaactggggctgctcctgtgatgtcagcatgtcata 34332806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 40930667 - 40930519
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||   ||| |||||||| | ||| |||||| | |||||| |||| ||||| | ||| |||||| | |||||||| || | |||||    
T  40930667 ccacggtttgccaaattattttttgtaggtaaccaatccctcaaaagtcgccaagcaaggatagatactttgagaggaacctgtttatgtcaaactaact 40930568  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||| ||| |||| |||| ||| || |||||| |||| |||||||||||    
T  40930567 ccatgttttgatgcaactgaggttgctcctgtgatgtcagcatgtcata 40930519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 35214486 - 35214354
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    ||||| |||||||| |||||   |||||||||||| ||||| | ||| | |||| | ||||||||||| ||||||||||||||| |||| |  | ||| |    
T  35214486 gtaggcaaacgatccctcaacatccgccaaacaaggatagaaacttttaaaggaacctgtttatgccagattaactccatattttgatgaacatgaggtt 35214387  T
Q  126 gttcctgtaatgttagcatgtcatacaccacgaac 160  Q
    ||||| || |||||| |||||  ||||||||||||    
T  35214386 gttcccgtgatgttaacatgt--tacaccacgaac 35214354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 29523860 - 29523724
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    |||||||||||||| |||||  | |||||| |||| ||||| | ||| | |||| | ||||||||||| ||||||||||||||| |||| |  | ||| |    
T  29523860 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaactccatattttgatgaacatgaggtt 29523761  T
Q  126 gttcctgtaatgttagcatgtc--atacaccacgaac 160  Q
    |||||||| |||| | || |||  |||||||||||||    
T  29523760 gttcctgtgatgtcaacaagtcatatacaccacgaac 29523724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 11203844 - 11203932
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatg 114  Q
    |||||||||||||| |||||  | |||||| |||| ||||| | ||| | |||| | ||||||||||| ||||||||||||||| ||||    
T  11203844 gtaggtaaacgatccctcaacagtcgccaagcaagtatagaaacttttaaaggaacctgtttatgccaaattaactccatattttgatg 11203932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 2364278 - 2364426
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    ||||| |||||| |||| | ||| |||||||| ||||| ||||   | |||||| |||| ||||| | ||| |||||  | ||||||||||| ||||| |    
T  2364278 ccacgatttgccaaattaagttttgtaggtaaccgatccctcagtagtcgccaagcaaggatagatactttgagagggacctgtttatgccaaattaagt 2364377  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||||||  | |||||||  || || |||||| |||| |||||||||||    
T  2364378 ccatattatggtgtaactggggctgctcctgtgatgtcagcatgtcata 2364426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 7312777 - 7312925
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    ||||| |||||| |||| | ||| |||||||| ||||| ||||   | |||||| |||| ||||| | ||| |||||  | ||||||||||| ||||| |    
T  7312777 ccacgatttgccaaattaagttttgtaggtaaccgatccctcattagtcgccaagcaaggatagatactttgagaggtacctgtttatgccaaattaagt 7312876  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||||||  | |||||||  || || |||||| |||| |||||||||||    
T  7312877 ccatattatggtgtaactggggctgctcctgtgatgtcagcatgtcata 7312925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 6e-40; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 17765102 - 17764922
Alignment:
Q  1 accacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaac 100  Q
    ||||||||||||| ||||| |||||||||||||| |||| |||||  |||||||| |||| ||||||| |||||||||||| ||||||||||||||||||    
T  17765102 accacggtttgccaaatttgctttcgtaggtaaatgatccctcaatagccgccaagcaagaatagagactttaagaggagcctgtttatgccatattaac 17765003  T
Q  101 tccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcatacaccac---gaactgaatacccgccaccctga 179  Q
    |||||||||  || |||| |||||||||| ||| |||| | |||||||||||| ||   ||||||||||| |||||||||||    
T  17765002 tccatatttgaatataaccaaggatgttcatgtgatgtcaacatgtcatacac-actgtgaactgaatactcgccaccctga 17764922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 41207041 - 41207165
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    |||||||| ||||| |||| | |||||||| |||| ||||||| ||| |||||| | ||||||||||| ||||||||||||||| ||||||||| |||||    
T  41207041 gtaggtaaccgatccctcagaagccgccaagcaaggatagagactttgagaggaacctgtttatgccaaattaactccatatttggatgtaactgaggat 41207140  T
Q  126 gttcctgtaatgttagcatgtcata 150  Q
    |||||||  |||| |||||||||||    
T  41207141 gttcctgcgatgtcagcatgtcata 41207165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 179
Target Start/End: Original strand, 28252725 - 28252900
Alignment:
Q  6 ggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccat 105  Q
    |||||||| ||||| | ||||||||||| ||||| |||||| |||||||| |||| ||||| | ||| |||||  | ||||||||||| ||||| |||||    
T  28252725 ggtttgccaaatttcccttcgtaggtaagcgatccctcaaaagccgccaagcaagaatagatacttttagaggtacctgtttatgccaaattaattccat 28252824  T
Q  106 atttagatgtaactaaggatgttcctgtaatgttagcatgtcatacacc--acgaactgaatacccgccaccctga 179  Q
    |  |  |||||||| ||| ||||||||| |||| |||||||||||||||  ||| |||||||| ||||| ||||||    
T  28252825 agatgaatgtaactgaggctgttcctgtgatgtcagcatgtcatacaccctacggactgaataaccgcctccctga 28252900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 153
Target Start/End: Complemental strand, 38604489 - 38604362
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    ||||||||||||||||| ||  || ||||  |||| || || | ||| |||||  ||||||||||||| ||||||||||||||| |||| || | ||| |    
T  38604489 gtaggtaaacgatctcttaacagcagccatgcaaggattgaaacttttagaggtacttgtttatgccagattaactccatattttgatgaaaattaggtt 38604390  T
Q  126 gttcctgtaatgttagcatgtcatacac 153  Q
    |||||||| |||| | ||||||||||||    
T  38604389 gttcctgtgatgtcaacatgtcatacac 38604362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 4552170 - 4552318
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    ||||| |||||| |||| | ||| |||||||| ||||| |||| | | |||||| |||| ||||| | |||||||||| | | ||||||||| ||||| |    
T  4552170 ccacgatttgccaaattaagttttgtaggtaaccgatccctcagaagtcgccaagcaaggatagatactttaagaggaacctatttatgccaaattaagt 4552269  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||||||  | |||||||  || || |||||| |||| |||||||||||    
T  4552270 ccatattatggtgtaactggggctgctcctgtgatgtcagcatgtcata 4552318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 9e-39; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 15958953 - 15958777
Alignment:
Q  1 accacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaac 100  Q
    |||| |||||||| ||||| |||||||||||||| |||| |||||| |||||||| |||| ||||||| |||||||||| | ||||||||||||||||||    
T  15958953 accatggtttgccaaatttgctttcgtaggtaaatgatccctcaaaagccgccaagcaagaatagagactttaagaggaacctgtttatgccatattaac 15958854  T
Q  101 tccatatttagatgtaactaaggatgttcctgtaatgttagcatgtc--atacaccacgaactgaatacccgccacc 175  Q
    | ||||||| ||||||||| | | ||||||||| |||| ||||||||  | ||||| |||||||||||||| |||||    
T  15958853 ttcatatttggatgtaactgaagttgttcctgtgatgtcagcatgtcagacacaccgcgaactgaatacccaccacc 15958777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 18651349 - 18651225
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    |||||||| ||||| |||| | | |||||| |||| ||||||| ||| |||||| | ||||||||||| ||||||||||||||| ||| |||||  || |    
T  18651349 gtaggtaaccgatccctcagaagtcgccaagcaaggatagagactttgagaggaacctgtttatgccaaattaactccatattttgatctaactggggct 18651250  T
Q  126 gttcctgtaatgttagcatgtcata 150  Q
    | |||||| |||| |||||||||||    
T  18651249 gctcctgtgatgtcagcatgtcata 18651225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 2553638 - 2553744
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||   ||| |||||||| |||||| ||||| | |||||| |||| ||||| | ||| |||||| | ||||||||||| |||||||    
T  2553638 ccacggtttgccaaattattttttgtaggtaaccgatctttcaaaagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaact 2553737  T
Q  102 ccatatt 108  Q
    |||||||    
T  2553738 ccatatt 2553744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 24767508 - 24767415
Alignment:
Q  57 caagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||| ||||||| ||| | |||| | ||||||||| | ||||||||||||||| |||||||||| || || |||||| |||| |||||||||||    
T  24767508 caaggatagagactttgataggaacctgtttatgcaaaattaactccatattttgatgtaactagggctgctcctgtgatgtcagcatgtcata 24767415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 154
Target Start/End: Complemental strand, 14373130 - 14372978
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||| ||||||||||||| |  |  |||||| || ||||| |||| ||||| | ||| |||||  | ||||||||||| ||||| |    
T  14373130 ccacggtttgccaaatttcctttcgtaggtaagccgttcctcaaaagctgccaagcaagaatagatacttttagaggtacctgtttatgccaaattaaat 14373031  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcatacacc 154  Q
    |||||     |||||||| ||| ||||||||  |||| |||||||||||||||    
T  14373030 ccatagaagaatgtaactgaggctgttcctgggatgtcagcatgtcatacacc 14372978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 21630222 - 21630086
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    |||||||||||||| |||||  | ||||||||||| ||||| | ||| | |||| | || |||||||| ||||||||||||||| |||| |  | ||| |    
T  21630222 gtaggtaaacgatccctcaatagtcgccaaacaaggatagaaacttttaaaggaacctggttatgccaaattaactccatattttgatgaacatgaggtt 21630123  T
Q  126 gttcctgtaatgttagcatgtc--atacaccacgaac 160  Q
    |||||||| |||| | || |||  |||||||||||||    
T  21630122 gttcctgtgatgtcaacaagtcatatacaccacgaac 21630086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 20883148 - 20883012
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    |||||||||| ||| |||||  |||||||| |||| ||||| | ||| | |||| | | ||||||||| ||||||||||||||| |||| |  |  || |    
T  20883148 gtaggtaaacaatccctcaacagccgccaagcaaggatagaaacttttaaaggaacctatttatgccagattaactccatattttgatgaacatgtggtt 20883049  T
Q  126 gttcctgtaatgttagcatgtc--atacaccacgaac 160  Q
    |||||||| |||| | ||||||  |||||||||||||    
T  20883048 gttcctgtgatgtcaacatgtcatatacaccacgaac 20883012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 17606449 - 17606361
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatg 114  Q
    ||||||||| |||| |||||  | |||||| |||| ||||| | ||| | |||| | ||||||||||| ||||||||||||||| ||||    
T  17606449 gtaggtaaatgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaactccatattttgatg 17606361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 179
Target Start/End: Complemental strand, 47623215 - 47623037
Alignment:
Q  3 cacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactc 102  Q
    ||||||||||| ||||| | ||||||||||| || || |||||| |||||||| |||| ||||| | ||| |||||  | ||||||||||| ||||| ||    
T  47623215 cacggtttgccaaatttcccttcgtaggtaagcggtccctcaaaagccgccaagcaagaatagatactttgagaggtacctgtttatgccaaattaattc 47623116  T
Q  103 catatttagatgtaactaaggatgttcctgtaatgttagcatgtcataca--ccacgaactgaatacccgccaccctga 179  Q
    ||||| |  |||||||| ||| ||||||||| |||| |||||||||||||  ||| | |||||||||||||| ||||||    
T  47623115 catatatgaatgtaactgaggttgttcctgtgatgtcagcatgtcatacaccccatggactgaatacccgcctccctga 47623037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 51052481 - 51052629
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    ||||| |||||| |||| | ||| |||||||| ||||| |||| | | |||||| |||| ||||| | ||| |||||| | ||||||||||| ||||| |    
T  51052481 ccacgatttgccaaattaagttttgtaggtaaccgatccctcagaagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaagt 51052580  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||||||  | |||||||  || || |||||| |||| |||||||||||    
T  51052581 ccatattatggtgtaactggggctgctcctgtgatgtcagcatgtcata 51052629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 11909244 - 11909096
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    ||||| |||||| |||| | ||| |||||||| ||||| |||| | | |||||| |||  ||||| | ||| |||||| | ||||||||||| ||||| |    
T  11909244 ccacgatttgccaaattaagttttgtaggtaaccgatccctcagaagtcgccaagcaatgatagatactttgagaggaacctgtttatgccaaattaagt 11909145  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||||||  | |||||||  || || |||||| |||| |||||||||||    
T  11909144 ccatattatggtgtaactggggctgctcctgtgatgtcagcatgtcata 11909096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 16917924 - 16917836
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatg 114  Q
    |||||||| ||||| |||||  | |||||| |||| ||||| | ||| | |||| | ||||||||||| ||||||||||||||| ||||    
T  16917924 gtaggtaagcgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaactccatattttgatg 16917836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 43388392 - 43388480
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatg 114  Q
    |||||||||||||| |||||    |||||| |||| ||||| | ||| | |||| | ||||||||||| ||||||||||||||| ||||    
T  43388392 gtaggtaaacgatccctcaacaatcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaactccatattttgatg 43388480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 3273 - 3401
Alignment:
Q  22 tttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaa 121  Q
    |||||||||||| |||||||||||| | | |||| |||| ||||| | |||||||||| | ||||||||||| ||||||||||||||  | ||||||||     
T  3273 tttcgtaggtaaccgatctctcaaaagtctccaagcaaggatagaaactttaagaggaacctgtttatgccaaattaactccatattatggtgtaactag 3372  T
Q  122 ggatgttcctgtaatgttagcatgtcata 150  Q
    || || |||||| |||| ||||| |||||    
T  3373 ggttgctcctgtgatgtcagcatatcata 3401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 11277391 - 11277243
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||   |||||||||||| |||||||||||| | |||||| |||| ||||| | ||| |||||| | ||||||||||| |||||||    
T  11277391 ccacggtttgccaaattatttttcgtaggtaaccgatctctcaaaagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaact 11277292  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||||||  | |||||||  || || |||||| |||| ||||| |||||    
T  11277291 ccatattatggtgtaactggggttgctcctgtgatgtcagcatatcata 11277243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 47876984 - 47877132
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||   ||| ||||||||  ||||||||| | | |||||| |||| ||||| | ||| |||||| | ||||||||||| |||||||    
T  47876984 ccacggtttgccaaattattttttgtaggtaactgatctctcagaagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaact 47877083  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    || ||||| |||||||||  || || |||||| |||| |||||||||||    
T  47877084 ccctattttgatgtaactggggctgctcctgtgatgtcagcatgtcata 47877132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 235552 - 235428
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    |||||||| ||||| |||| | | |||||| |||| ||||||| ||| ||| || | ||||||||||| ||||||||||||||| |||||||||  || |    
T  235552 gtaggtaaccgatccctcagaagtcgccaagcaaggatagagactttgagatgaacctgtttatgccaaattaactccatattttgatgtaactggggct 235453  T
Q  126 gttcctgtaatgttagcatgtcata 150  Q
    | |||||| |||| | |||||||||    
T  235452 gctcctgtgatgtcaacatgtcata 235428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 169
Target Start/End: Original strand, 17720636 - 17720805
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||  |||| |||||||| ||||| |||| | | |||||  |||| ||||| | ||| |||||| | ||| ||||||| |||||||    
T  17720636 ccacggtttgccaaattatcttttgtaggtaaccgatccctcagaagtcgccatgcaaggatagaaactttgagaggaacctgtgtatgccaaattaact 17720735  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata--caccacgaactgaataccc 169  Q
    |||  ||| ||||||| | ||| || |||||| |||| |||||||||||  | |||||||| ||||||||    
T  17720736 ccaagttttgatgtaagtgaggctgctcctgtgatgtcagcatgtcataggctccacgaacggaataccc 17720805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 106
Target Start/End: Original strand, 29967996 - 29968080
Alignment:
Q  22 tttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccata 106  Q
    |||||||||||| |||||||||||| | |  ||| |||| ||||| | ||| |||||| | ||||||||||| ||||||||||||    
T  29967996 tttcgtaggtaaccgatctctcaaaagtcctcaagcaaggatagatactttgagaggaacctgtttatgccaaattaactccata 29968080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 25619507 - 25619572
Alignment:
Q  49 ccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatg 114  Q
    ||||||| |||| ||||| | ||| | |||| | ||||||||||||||||||||||||||| ||||    
T  25619507 ccgccaagcaaggatagaaacttttaaaggaacctgtttatgccatattaactccatattttgatg 25619572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 4938267 - 4938119
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    ||||| |||||| |||| | ||| |||||||| ||||| ||||   | |||||| |||| ||||||| ||| |||||  | ||||||||||| ||||| |    
T  4938267 ccacgatttgccaaattaagttttgtaggtaaccgatccctcattagtcgccaagcaaggatagagactttgagagggacctgtttatgccaaattaagt 4938168  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    ||| |||  | |||||||  || || |||||| |||| |||||||||||    
T  4938167 ccacattatggtgtaactggggctgctcctgtgatgtcagcatgtcata 4938119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 42928156 - 42928280
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    |||| ||| ||||| |||| | ||||||||||||| ||||||| ||| |||||| | ||||||| ||| ||||||||||||||| |||||||||  || |    
T  42928156 gtagttaaccgatccctcagaagccgccaaacaaggatagagactttgagaggaacctgtttataccaaattaactccatatttggatgtaactggggct 42928255  T
Q  126 gttcctgtaatgttagcatgtcata 150  Q
    |||||||  |||| |||||||||||    
T  42928256 gttcctgcgatgtcagcatgtcata 42928280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 23238385 - 23238533
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||   |||||||||||| |||||||||||| | | |||| |||| ||||| | ||| |||||| | | ||||||||| |||||||    
T  23238385 ccacggtttgccaaattacttttcgtaggtaaccgatctctcaaaagtctccaagcaaggatagaaactttgagaggaacctatttatgccaaattaact 23238484  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||||||  | |||||||  || || |||||| |||||||||| |||||    
T  23238485 ccatattatggtgtaactggggttgctcctgtgatgttagcatatcata 23238533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 28535814 - 28535666
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||   ||| |||||||| ||||| |||| | | |||||| |||| ||||| | ||| |||||| | ||| ||||||| |||||||    
T  28535814 ccacggtttgccaaattattttttgtaggtaaccgatccctcagaagtcgccaagcaaggatagaaactttgagaggaacctgtgtatgccaaattaact 28535715  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||| ||| ||||||||| ||| || |||||| |||| |||||||||||    
T  28535714 ccatgttttgatgtaactgaggctgctcctgtgatgtcagcatgtcata 28535666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 8228028 - 8228133
Alignment:
Q  3 cacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactc 102  Q
    ||||||||||| ||||   |||||||||||| |||||||||||| | | |||| |||| ||||| | ||| |||||| | |||||||| || ||||||||    
T  8228028 cacggtttgccaaattacttttcgtaggtaaccgatctctcaaaagtctccaagcaaggatagatactttgagaggaacctgtttatgtcaaattaactc 8228127  T
Q  103 catatt 108  Q
    ||||||    
T  8228128 catatt 8228133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 12825200 - 12825348
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    ||||| |||||| |||| | ||| |||||||| ||||| |||| | | |||||| |||| ||| | | ||| |||||| ||||||||||||| ||||| |    
T  12825200 ccacgatttgccaaattaagttttgtaggtaaccgatccctcagaagtcgccaagcaaggatacatactttgagaggaacttgtttatgccaaattaagt 12825299  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||||||  | |||||||  || || |||||| |||| |||||||||||    
T  12825300 ccatattatggtgtaactggggctgctcctgtgatgtcagcatgtcata 12825348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 8300297 - 8300161
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    |||||||| ||||| |||||  | ||||||||||| ||||| | ||| | |||| | ||||||||||| ||||||||||||||| |||| |  | ||| |    
T  8300297 gtaggtaagcgatccctcaacagtcgccaaacaaggatagaaacttttaaaggaacctgtttatgccaaattaactccatattttgatgaacatgaggtt 8300198  T
Q  126 gttcctgtaatgttagcatgtcata--caccacgaac 160  Q
    |||||||| |||| | || ||||||  ||||||||||    
T  8300197 gttcctgtgatgtcaacaggtcatatgcaccacgaac 8300161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 30732453 - 30732305
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    ||||| |||||| |||| | ||| |||||||| ||||| |||| | | |||||| |||  ||||| | ||| |||||| | ||||||||||| ||||| |    
T  30732453 ccacgatttgccaaattaagttttgtaggtaaccgatccctcagaagtcgccaagcaaagatagatactttgagaggaacctgtttatgccaaattaagt 30732354  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||||||  | |||||||  || || |||||| |||| |||||||||||    
T  30732353 ccatattatggtgtaactggggctgctcctgtgatgtcagcatgtcata 30732305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 35983882 - 35983782
Alignment:
Q  50 cgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcat 149  Q
    |||||| |||| ||||| | ||| |||||| | ||| || |||| ||||||||||| ||| ||||||||| ||| || |||||| |||| ||||||||||    
T  35983882 cgccaagcaaggatagatactttgagaggaacctgtgtaagccaaattaactccatgttttgatgtaactgaggctgctcctgtgatgtcagcatgtcat 35983783  T
Q  150 a 150  Q
    |    
T  35983782 a 35983782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 33385489 - 33385353
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagaga-ttttaagaggagcttgtttatgccatattaactccatatttagatgtaactaagga 124  Q
    |||||||||||||| |||||  | |||||| |||| ||||| | ||||||| ||| | ||||||||||| ||||||||||||||| |||| |  | |||     
T  33385489 gtaggtaaacgatccctcaacagtcgccaagcaaggatagaaacttttaag-ggaacctgtttatgccaaattaactccatattttgatgaatatgaggt 33385391  T
Q  125 tgttcctgtaatgttagcatgtc--atacaccacgaac 160  Q
    ||||||||| |||| | || |||  |||||||||||||    
T  33385390 tgttcctgtgatgtcaacaagtcatatacaccacgaac 33385353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 160
Target Start/End: Complemental strand, 18359207 - 18359071
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    |||||||||||||| |||||   ||||||| |||| || || | ||| | |||| | ||||||||| | ||||||||||||||| |||| |  | ||| |    
T  18359207 gtaggtaaacgatccctcaacaaccgccaagcaaggattgaaacttttaaaggaacctgtttatgctagattaactccatattttgatgaacatgaggtt 18359108  T
Q  126 gttcctgtaatgttagcatgtc--atacaccacgaac 160  Q
    |||||||| |||| | ||||||  |||||||||||||    
T  18359107 gttcctgtgatgtcaacatgtcatatacaccacgaac 18359071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 160
Target Start/End: Original strand, 27767067 - 27767203
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    |||||||||||||| |||||  | |||||| |||| ||| | | ||| | |||| | ||||||||||| ||||||||||||||| |||| |  | ||| |    
T  27767067 gtaggtaaacgatccctcaacagtcgccaagcaaggatataaacttttaaaggaacctgtttatgccaaattaactccatattttgatgaacatgaggtt 27767166  T
Q  126 gttcctgtaatgttagcatgtc--atacaccacgaac 160  Q
    |||||||| |||| | || |||  |||||||||||||    
T  27767167 gttcctgtgatgtcaacaagtcatatacaccacgaac 27767203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 25857539 - 25857451
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatg 114  Q
    |||||||| ||||| |||||  | |||||| |||| ||||| | ||| | |||| | ||||||||||| ||||||||||||||| ||||    
T  25857539 gtaggtaagcgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaactccatattttgatg 25857451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 31641584 - 31641660
Alignment:
Q  74 agaggagcttgtttatgccatattaactccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||||| | ||| ||||||| ||||||||||| ||| ||||||| | ||| || |||||| |||| |||||||||||    
T  31641584 agaggaacctgtgtatgccaaattaactccatgttttgatgtaagtgaggctgctcctgtgatgtcagcatgtcata 31641660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 179
Target Start/End: Complemental strand, 11587334 - 11587158
Alignment:
Q  5 cggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactcca 104  Q
    ||||||||| ||||| ||||||||||||||||||  |||| | |||||||| |||| ||||| | ||| | |||    | ||||||||| ||||||||||    
T  11587334 cggtttgccaaattttctttcgtaggtaaacgattcctcagaagccgccaagcaagaatagatactttgataggtatctatttatgccaaattaactcca 11587235  T
Q  105 tatttagatgtaactaaggatgttcctgtaatgttagcatgtcat--acaccacgaactgaatacccgccaccctga 179  Q
    ||  | |||| |||| ||| ||||||||| |||| ||||||||||  |||||||  |||||||| ||||| ||||||    
T  11587234 tagatggatgcaactgaggctgttcctgtgatgtcagcatgtcatacacaccacagactgaatatccgcctccctga 11587158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 7403914 - 7404062
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||   ||| |||||||| ||||| |||| | | |||||| |||| ||||||| ||| | | || ||||||||||||| |||||||    
T  7403914 ccacggtttgccaaattcttttttgtaggtaaccgatccctcagaagtcgccaagcaaggatagagactttgaaatgaacttgtttatgccaaattaact 7404013  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
     ||||||| |||||||||  || || |||||| |||| |||||||||||    
T  7404014 tcatattttgatgtaactggggctgctcctgtgatgtcagcatgtcata 7404062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 45472824 - 45472736
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatg 114  Q
    |||||||||||||| |||||  | ||||||||||| ||||| | ||| | |||| | ||||||||||| ||||||||||||||| ||||    
T  45472824 gtaggtaaacgatccctcaacagtcgccaaacaaggatagaaacttttaaaggaacctgtttatgccaaattaactccatattttgatg 45472736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 55725801 - 55725718
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatattt 109  Q
    |||||||| ||||| |||||  |||||||| |||| || || | ||| |||||| ||||||||||||| |||||||||||||||    
T  55725801 gtaggtaagcgatccctcaatagccgccaagcaaggattgaaacttttagaggaacttgtttatgccaaattaactccatattt 55725718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 19755269 - 19755373
Alignment:
Q  3 cacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactc 102  Q
    ||||||||||| ||||   ||| |||||||| ||||||||||   | |||||| |||| ||||| | ||| |||||| | ||||||||||| ||||||||    
T  19755269 cacggtttgccaaattattttttgtaggtaaccgatctctcaggagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaactc 19755368  T
Q  103 catat 107  Q
    |||||    
T  19755369 catat 19755373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 19784537 - 19784433
Alignment:
Q  3 cacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactc 102  Q
    ||||||||||| ||||   ||| |||||||| ||||||||||   | |||||| |||| ||||| | ||| |||||| | ||||||||||| ||||||||    
T  19784537 cacggtttgccaaattattttttgtaggtaaccgatctctcaggagtcgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaactc 19784438  T
Q  103 catat 107  Q
    |||||    
T  19784437 catat 19784433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 15740246 - 15740328
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatt 108  Q
    |||||||| ||||||| |||| | | |||| |||| ||||| | ||| |||||| | ||||||||||| ||||||||||||||    
T  15740246 gtaggtaaccgatctcgcaaaagtctccaagcaaggatagatactttgagaggaacctgtttatgccaaattaactccatatt 15740328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 47686034 - 47685932
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||   ||| |||||||| |||||||||||| | |||||| |||| ||||| | ||| |||||| | |||||||| || ||||| |    
T  47686034 ccacggtttgccaaattatgttttgtaggtaaccgatctctcaaaagtcgccaagcaaggatagatactttgagaggaacctgtttatgtcaaattaagt 47685935  T
Q  102 cca 104  Q
    |||    
T  47685934 cca 47685932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 1828679 - 1828562
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||   ||| |||||||| | ||||| |||  | | |||| |||| ||||| | ||| |||||| | ||||||||||| |||||||    
T  1828679 ccacggtttgccaaattagtttttgtaggtaacctatctcgcaatagtctccaagcaaggatagatactttgagaggaacctgtttatgccaaattaact 1828580  T
Q  102 ccatatttagatgtaact 119  Q
    |||||||  |||||||||    
T  1828579 ccatattatgatgtaact 1828562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 19735804 - 19735735
Alignment:
Q  84 gtttatgccatattaactccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcatacac 153  Q
    |||||||||  |||||||||| |||| ||||||||  ||| ||||||||  |||| ||||||||||||||    
T  19735804 gtttatgcctaattaactccaaattttgatgtaacataggttgttcctgcgatgtcagcatgtcatacac 19735735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 13271030 - 13270882
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    ||||| |||||| |||| | ||| |||||||| ||||| ||||   | |||||| |||| ||||||| ||| |||||  | ||||||||||| ||||| |    
T  13271030 ccacgatttgccaaattaagttttgtaggtaaccgatccctcattagtcgccaagcaaggatagagactttgagagggacctgtttatgccaaattaagt 13270931  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    ||| |||  | |||||||  || || |||||| |||| |||||||||||    
T  13270930 ccacattatggtgtaactggggctgctcctgtgatgtcagcatgtcata 13270882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 23642730 - 23642582
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    ||||| |||||| |||| | ||| |||||||| ||||| ||||   | |||||| |||| ||||||| ||| |||||  | ||||||||||| ||||| |    
T  23642730 ccacgatttgccaaattaagttttgtaggtaaccgatccctcattagtcgccaagcaaggatagagactttgagagggacctgtttatgccaaattaagt 23642631  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    ||| |||  | |||||||  || || |||||| |||| |||||||||||    
T  23642630 ccacattatggtgtaactggggctgctcctgtgatgtcagcatgtcata 23642582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 13396389 - 13396537
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||   ||| |||||||| ||||||||||   | |||||| |||| ||||| | ||| |||||| ||||||||||||| |||||||    
T  13396389 ccacggtttgccaaattattttttgtaggtaaccgatctctcaggagtcgccaagcaaggatagatactttgagaggaacttgtttatgccaaattaact 13396488  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    ||||||   ||||||| |  || || |||||| |||| |||||||||||    
T  13396489 ccatatgatgatgtaattggggctgctcctgtgatgtcagcatgtcata 13396537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 32266565 - 32266667
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||   |||||||||||| |||||||||||| | | |||| |||| ||||| | ||| |||||| | ||||||||||| |||||||    
T  32266565 ccacggtttgccaaattacttttcgtaggtaaccgatctctcaaaagtctccaagcaaggatagatactttgagaggaacctgtttatgccaaattaact 32266664  T
Q  102 cca 104  Q
    |||    
T  32266665 cca 32266667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 34137099 - 34137010
Alignment:
Q  5 cggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccat 94  Q
    ||||||||| ||||| |||||||||||||||||||  ||| | |||||||| |||| ||||||| ||| |||||  | ||||||||||||    
T  34137099 cggtttgccaaattttctttcgtaggtaaacgatccatcataagccgccaagcaagaatagagactttgagaggtacctgtttatgccat 34137010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 160
Target Start/End: Original strand, 37434157 - 37434293
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    |||||||||||||| |||||  | |||||| |||| ||||||| ||| | |||| | ||||||||||| ||||||||||||||| |||| |  | ||| |    
T  37434157 gtaggtaaacgatccctcaacagtcgccaagcaagaatagagacttttaaaggaacatgtttatgccaaattaactccatattttgatgaacatgaggtt 37434256  T
Q  126 gttcctgtaatgttagcatgtc--atacaccacgaac 160  Q
    |||||||| |||| | || |||  |||||||||||||    
T  37434257 gttcctgtgatgtcaacaagtcatatacaccacgaac 37434293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 2170367 - 2170491
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    |||||||||||||| |||||  | |||||| |||| ||||| | ||| | |||| | ||||||||||| ||||||||||||||| |||| |  | ||| |    
T  2170367 gtaggtaaacgatccctcaacggtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccagattaactccatattttgatgaacatgaggtt 2170466  T
Q  126 gttcctgtaatgttagcatgtcata 150  Q
    |||||||| |||| | |||||||||    
T  2170467 gttcctgtgatgtcaacatgtcata 2170491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 9922602 - 9922750
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    |||||||||||| ||||  |||| |||||||| ||||| |||| | | || ||  |||| ||||| | ||| |||||| | ||| ||||||| |||||||    
T  9922602 ccacggtttgccaaattatcttttgtaggtaaccgatccctcagaagtcgtcatgcaaggatagaaactttgagaggaacctgtgtatgccaaattaact 9922701  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    |||  ||| ||||||| | ||| || |||||| |||| |||||||||||    
T  9922702 ccaagttttgatgtaagtgaggctgctcctgtgatgtcagcatgtcata 9922750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 153
Target Start/End: Original strand, 13200148 - 13200275
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggat 125  Q
    |||||||||||||| |||||  || ||||| |||| || || | ||| |||||| | ||||||||||| | ||||||||||||| |||| |  | ||| |    
T  13200148 gtaggtaaacgatccctcaatagctgccaagcaaggattgaaacttttagaggaacctgtttatgccaaactaactccatattttgatgaacatgaggtt 13200247  T
Q  126 gttcctgtaatgttagcatgtcatacac 153  Q
    |||||||| |||| | ||| ||||||||    
T  13200248 gttcctgtgatgtcaacatatcatacac 13200275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 7924387 - 7924535
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    ||||| |||||| |||| | ||| |||||||| ||||| ||||   | |||||| |||| ||||||| ||| |||||  | ||||||||||| ||||| |    
T  7924387 ccacgatttgccaaattaagttttgtaggtaaccgatccctcattagtcgccaagcaaggatagagactttgagagggacctgtttatgccaaattaagt 7924486  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    ||| |||  | |||||||  || || |||||| |||| |||||||||||    
T  7924487 ccacattatggtgtaactggggctgctcctgtgatgtcagcatgtcata 7924535  T

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Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 20824321 - 20824409
Alignment:
Q  26 gtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatg 114  Q
    |||||||| ||||| |||||  | |||||| |||| ||||| | ||| | |||| | ||||||||||| ||||||||||||||| ||||    
T  20824321 gtaggtaagcgatccctcaacagtcgccaagcaaggatagaaacttttaaaggaacctgtttatgccaaattaactccatattttgatg 20824409  T

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Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 41665460 - 41665360
Alignment:
Q  50 cgccaaacaagcatagagattttaagaggagcttgtttatgccatattaactccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcat 149  Q
    |||||| |||| ||||| | ||| |||||| | ||||||||||| |||||||||||||   ||||||| |  || || |||||| |||| ||||||||||    
T  41665460 cgccaagcaaggatagatactttgagaggaacctgtttatgccaaattaactccatatgatgatgtaattggggctgctcctgtgatgtcagcatgtcat 41665361  T
Q  150 a 150  Q
    |    
T  41665360 a 41665360  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 105982 - 105834
Alignment:
Q  2 ccacggtttgccgaatttactttcgtaggtaaacgatctctcaaatgccgccaaacaagcatagagattttaagaggagcttgtttatgccatattaact 101  Q
    ||||| |||||| |||| | ||| |||||||| ||||| ||||   | |||||| |||| ||||||| ||| |||||  | ||||||||||| ||||| |    
T  105982 ccacgatttgccaaattaagttttgtaggtaaccgatccctcattagtcgccaagcaaggatagagactttgagagggacctgtttatgccaaattaagt 105883  T
Q  102 ccatatttagatgtaactaaggatgttcctgtaatgttagcatgtcata 150  Q
    ||| |||  | |||||||  || || |||||| |||| |||||||||||    
T  105882 ccacattatggtgtaactggggctgctcctgtgatgtcagcatgtcata 105834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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