View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17303_low_45 (Length: 272)
Name: NF17303_low_45
Description: NF17303
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17303_low_45 |
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Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 21 - 262
Target Start/End: Complemental strand, 25640975 - 25640734
Alignment:
| Q |
21 |
aaggccatcatattgcaccttcatatgacactgtgcactctcttttaaccttttcatcacttgtcacatgagttataatggttaagtgtgaatgactaag |
120 |
Q |
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| T |
25640975 |
aaggccatcatattgcaccttcatatgacactgtgcactctcttttaaccttttcatcacttgtcacatgagttataatggttaagtgtgaatgactaag |
25640876 |
T |
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| Q |
121 |
ttacttgcttatgattggaccactttaattacttgctttgaaagaagtcaaaagttgaatttcttggggctgaaatcatgtggtcaagtggtcgccataa |
220 |
Q |
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| T |
25640875 |
ttacttgcttatgattggaccactttaattacttgctttgaaaaaagtcaaaagttgaatttcttggggctggaatcatgtggtcaagtggtcgccataa |
25640776 |
T |
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| Q |
221 |
tactttttatattttatcccaatctgatctgagcttcctttg |
262 |
Q |
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| T |
25640775 |
tactttttatattttatcccaatctgatctgagcttcctttg |
25640734 |
T |
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