View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17304_high_30 (Length: 207)
Name: NF17304_high_30
Description: NF17304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17304_high_30 |
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Alignment Details
Target: chr5 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 6784925 - 6785124
Alignment:
| Q |
1 |
atacttaaccaactatgacaaataattttttgaataaccagttatcacaaaaagtagtatgaaagttattccattattattaacatcacattacgtctat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6784925 |
atacttaaccaactatgacaaataattttttgaataaccagttatcacaaaaagtagtatgaaagttattccattattattaacatcacattacgtctat |
6785024 |
T |
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| Q |
101 |
-nnnnnnnnnttacaatacggtgcttaannnnnnnacacaagcttctggttctagctagctatacaaaagcaaatcactcaattttcttctccctttgct |
199 |
Q |
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|||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||| |
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| T |
6785025 |
aaaaaaaatattacaatacggtgcttaatttttttacacaagcttctggtt----ctagctatacaaaaacaaatcactcaattttcttctccttttgct |
6785120 |
T |
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