View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17304_high_9 (Length: 394)
Name: NF17304_high_9
Description: NF17304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17304_high_9 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 290; Significance: 1e-162; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 290; E-Value: 1e-162
Query Start/End: Original strand, 11 - 345
Target Start/End: Original strand, 12930707 - 12931041
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaac |
110 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| |
|
|
| T |
12930707 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagtaggtctcacgggaaac |
12930806 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930807 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
12930906 |
T |
|
| Q |
211 |
ctcggtattagagggttttccacgttaaatattggtgttcannnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaatttta |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
12930907 |
ctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtctcttttggattttggaatttta |
12931006 |
T |
|
| Q |
311 |
atttacacttgcgttaagctcgtcgagcccaacaa |
345 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
12931007 |
atttacacttgcgttaagctcgtcgagcccaacaa |
12931041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 11 - 344
Target Start/End: Original strand, 12935453 - 12935786
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaac |
110 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||| ||||||| |
|
|
| T |
12935453 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagagtaaaagtaggtctcacgggaaac |
12935552 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935553 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
12935652 |
T |
|
| Q |
211 |
ctcggtattagagggttttccacgttaaatattggtgttcannnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaatttta |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| | ||||||| |||||||||||||| |
|
|
| T |
12935653 |
ctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtttcttttgaattttggaatttta |
12935752 |
T |
|
| Q |
311 |
atttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
12935753 |
atttacacttgcgttaagctcgtcgagcccaaca |
12935786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 137 - 249
Target Start/End: Complemental strand, 26505055 - 26504945
Alignment:
| Q |
137 |
agagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttccacgtt |
236 |
Q |
| |
|
||||||| || |||||||||||||||| |||| |||||| |||||||||| ||||||||| | |||| |||| ||| | ||||||| ||| || |||||| |
|
|
| T |
26505055 |
agagagttgaaagaatattgtaatattttttattatagttgaatattttttggagtttgtactgtgg-ttttgccttgttattagacggtatt-cacgtt |
26504958 |
T |
|
| Q |
237 |
aaatattggtgtt |
249 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
26504957 |
aaatattgatgtt |
26504945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 15588948 - 15589060
Alignment:
| Q |
139 |
agagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttccacgttaa |
238 |
Q |
| |
|
|||||||||| ||| |||||||||| ||| ||| |||| ||||||||| ||||||||| | || |||||| ||| || ||||||||||| || ||| |
|
|
| T |
15588948 |
agagtggagaaaatgttgtaatattgtttgataaagtgaaatattttttagagtttgtcacttgatttttctctcattaatagagggtttttcaaaataa |
15589047 |
T |
|
| Q |
239 |
atattggtgttca |
251 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
15589048 |
atattgatgttca |
15589060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 336
Target Start/End: Complemental strand, 26504895 - 26504850
Alignment:
| Q |
291 |
ttttggattttggaattttaatttacacttgcgttaagctcgtcga |
336 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | |||| |||||||| |
|
|
| T |
26504895 |
ttttggattttgaaattttaatttacacttccattaaactcgtcga |
26504850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 11 - 344
Target Start/End: Original strand, 34907170 - 34907503
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaac |
110 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||| |
|
|
| T |
34907170 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaataaaagtaggtctcacgggaaac |
34907269 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907270 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
34907369 |
T |
|
| Q |
211 |
ctcggtattagagggttttccacgttaaatattggtgttcannnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaatttta |
310 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
34907370 |
ctcggtattagagggttttccacgttaaatattggtgttcatttttttatcgctaccgctgcgctgcaagatccagtctcttttggattttggaatttta |
34907469 |
T |
|
| Q |
311 |
atttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
34907470 |
atttacacttgcgttaagctcgtcgagcccaaca |
34907503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 283; Significance: 1e-158; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 11 - 345
Target Start/End: Original strand, 14173968 - 14174303
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaac |
110 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
14173968 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaac |
14174067 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174068 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
14174167 |
T |
|
| Q |
211 |
ctcggtattagagggttttccacgttaaatattggtgttca-nnnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaatttt |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14174168 |
ctcggtattagagggttttccacgttaaatattggtgttcattttttttatcactaccgctgcgctgcaagatccagtctcttttggattttggaatttt |
14174267 |
T |
|
| Q |
310 |
aatttacacttgcgttaagctcgtcgagcccaacaa |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174268 |
aatttacacttgcgttaagctcgtcgagcccaacaa |
14174303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 11 - 345
Target Start/End: Original strand, 14178722 - 14179057
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaac |
110 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
14178722 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaac |
14178821 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178822 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
14178921 |
T |
|
| Q |
211 |
ctcggtattagagggttttccacgttaaatattggtgttca-nnnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaatttt |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
14178922 |
ctcggtattagagggttttccacgttaaatattggtgttcattttttttattgctaccgctgcgctgcaagatccagtctcttttggattttggaatttt |
14179021 |
T |
|
| Q |
310 |
aatttacacttgcgttaagctcgtcgagcccaacaa |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
14179022 |
aatttacacttgcgttaagctcgtcgagcccaacaa |
14179057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 11 - 345
Target Start/End: Complemental strand, 28611902 - 28611567
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaac |
110 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
28611902 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaac |
28611803 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611802 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
28611703 |
T |
|
| Q |
211 |
ctcggtattagagggttttccacgttaaatattggtgttca-nnnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaatttt |
309 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28611702 |
ctcggtattagagggtttttcacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccagtctcttttggattttggaatttt |
28611603 |
T |
|
| Q |
310 |
aatttacacttgcgttaagctcgtcgagcccaacaa |
345 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611602 |
aatttacacttgcgttaagctcgtcgagcccaacaa |
28611567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 11 - 346
Target Start/End: Complemental strand, 28607140 - 28606804
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaac |
110 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
28607140 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacgggaaac |
28607041 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28607040 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
28606941 |
T |
|
| Q |
211 |
ctcggtattagagggttttccacgttaaatattggtgttca-nnnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaatttt |
309 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28606940 |
ctcggtattagagggtttttcacgttaaatattggtgttaattttttttatcgctaccgctgcgctgcaagatccagtctcttttggattttggaatttt |
28606841 |
T |
|
| Q |
310 |
aatttacacttgcgttaagctcgtcgagcccaacaat |
346 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28606840 |
aatttacacttgcgttaagctcgtcgagcccaacaat |
28606804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 11 - 344
Target Start/End: Original strand, 44161617 - 44161949
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaac |
110 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| |
|
|
| T |
44161617 |
cagagagtgtgggaaaaatacaccgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtcttacgggaaac |
44161716 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
210 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161717 |
actatattgtatctcttgtgtgtgtaagagagtggagaga--attgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
44161814 |
T |
|
| Q |
211 |
ctcggtattagagggttttccacgttaaatattggtgttca-nnnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaatttt |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161815 |
ctcggtattagagggttttccacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccaatctcttttggattttggaatttt |
44161914 |
T |
|
| Q |
310 |
aatttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
44161915 |
aatttacacttgcgttaagctcgtcgagcccaaca |
44161949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 11 - 344
Target Start/End: Original strand, 11104500 - 11104829
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaac |
110 |
Q |
| |
|
|||||||||| ||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||| |||||| ||| | ||||| ||||||| |
|
|
| T |
11104500 |
cagagagtgtaggaaaaatacaccgggtggatatcatctctataacttctaggtgttataaaataatagcatttgaataggagtgggtctcacgggaaac |
11104599 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
210 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| || |
|
|
| T |
11104600 |
actatattgtatctctt-tgtgtgtaagagagtggagagaatattgtaatattcttagatatggtggaatatttttcggagtttgtcccgtgg-tttacc |
11104697 |
T |
|
| Q |
211 |
ctcggtattagagggttttccacgttaaatattggtgttcannnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaatttta |
310 |
Q |
| |
|
|||| ||||||||| ||||| | |||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11104698 |
ctcgatattagaggattttctatgttaaatattggtgttca--tttttatcgctacagctgcgctgcaagatccaatctcttttggattttggaatttta |
11104795 |
T |
|
| Q |
311 |
atttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
11104796 |
atttacacttgcgttaagctcgtcgagcccaaca |
11104829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 42 - 346
Target Start/End: Complemental strand, 48827000 - 48826700
Alignment:
| Q |
42 |
tatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaacactatattgtatctcttgtgtgtgtgagaga |
141 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
48827000 |
tatcatctctataacttctaggtgctataaaataatagcattcaaataggagtgaatctcacgggaaacactatattgtatctcttgtgtgtgtaagaga |
48826901 |
T |
|
| Q |
142 |
gtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttccacgttaaata |
241 |
Q |
| |
|
| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
48826900 |
gcgaagagaatattgtaatattctttaatatagtggaatatttttcggag-ttgtcccgtgatttttccctcggtattagaggattttccacgttaaata |
48826802 |
T |
|
| Q |
242 |
ttggtgttcannnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagccca |
341 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
48826801 |
ttggtgttc-tttttctatcgctaccgctgcgctgcaagatccaatctc--ttgaattttgaaattttaatttacaattgcgttaagctcgtcgatccca |
48826705 |
T |
|
| Q |
342 |
acaat |
346 |
Q |
| |
|
||||| |
|
|
| T |
48826704 |
acaat |
48826700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 230
Target Start/End: Complemental strand, 24726446 - 24726288
Alignment:
| Q |
69 |
taaaataatagcattagaatagaagtagatctcatgggaaacactatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattcttta |
168 |
Q |
| |
|
|||||||||| |||| |||||| ||| | ||||| || ||||| |||| |||||||| |||| || ||||| ||||||||||||| | || ||||||| |
|
|
| T |
24726446 |
taaaataataacatttgaataggagtgg-tctcacggaaaacaatatagtgtatctc--gtgtcggtaagagaatggagagaatattattatgttcttta |
24726350 |
T |
|
| Q |
169 |
atatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttc |
230 |
Q |
| |
|
||||| ||||||||||||| ||||||||| ||||| |||||||| | ||||||| ||||||| |
|
|
| T |
24726349 |
atataatggaatatttttcagagtttgtctcgtggcttttcccttgatattagatggttttc |
24726288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 145 - 317
Target Start/End: Complemental strand, 48708256 - 48708086
Alignment:
| Q |
145 |
gagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattg |
244 |
Q |
| |
|
||||||||||||||||||| ||||||||| || ||||||||| |||||||||| ||||||||||| || |||||| || ||||| || ||||||||||| |
|
|
| T |
48708256 |
gagagaatattgtaatattttttaatataatgaaatattttttggagtttgtcacgtggtttttctcttagtattatagagtttttcatgttaaatattg |
48708157 |
T |
|
| Q |
245 |
gtgttcannnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaattttaatttaca |
317 |
Q |
| |
|
|| || | ||||| ||| || || || ||||| |||| |||||| ||||||||||||||||||||| |
|
|
| T |
48708156 |
gtattta--attttatcgccaccactgcgttgtaagattcaatttcttttatattttggaattttaatttaca |
48708086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 11 - 344
Target Start/End: Complemental strand, 37040760 - 37040426
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaac |
110 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| |
|
|
| T |
37040760 |
cagagagtgtgggaaaaatacatcgggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtaggtctcacggaaaac |
37040661 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37040660 |
actatattgtatctcttgtgtgtgtgagagagtggagaaaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
37040561 |
T |
|
| Q |
211 |
ctcggtattagagggttttccacgttaaatattggtgttca-nnnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaatttt |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
37040560 |
ctcggtattagagggttttccacgttaaatattggtgttcattttttttatcgctaccgctgcgctgcaagatccagtcttttttggattttggaatttt |
37040461 |
T |
|
| Q |
310 |
aatttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
37040460 |
aatttacacttgcgttaagctcgtcgagcccaaca |
37040426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 22 - 345
Target Start/End: Original strand, 15290273 - 15290595
Alignment:
| Q |
22 |
ggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaacactatattgta |
121 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| | ||||| || ||||||||||||||| |
|
|
| T |
15290273 |
ggaaaaatacaccgggtgggtatcatctctataacttctaggtgctg--aaataatagcattcgaataggagtgggtctcacgg-aaacactatattgta |
15290369 |
T |
|
| Q |
122 |
tctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattag |
221 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| || ||| ||||||||||||||||||| | |||||||||||| |
|
|
| T |
15290370 |
tctcttgtgtgtgtaagagagtggagagaatattgtaatattcttaaatatagtggaaaatcttttggagtttgtcccgtggtttatacctcggtattag |
15290469 |
T |
|
| Q |
222 |
agggttttccacgttaaatattggtgttca-nnnnnnnatcgctaccgctacgctgcaagatccaatctc-ttttggattttggaattttaatttacact |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||||||||| |||||||||||||| | |
|
|
| T |
15290470 |
agggttttccacgttaaatattggtgttcattttttttatcgctaaggctgcgctgcaagatccaatctctttttggattttgaaattttaatttacaat |
15290569 |
T |
|
| Q |
320 |
tgcgttaagctcgtcgagcccaacaa |
345 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
15290570 |
tgcgttaagctcgtcgagcccaacaa |
15290595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 41 - 344
Target Start/End: Original strand, 12099060 - 12099361
Alignment:
| Q |
41 |
gtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaacactatattgtatctcttgtgtgtgtgagag |
140 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||| |||| |||||| ||| ||||| ||||||| ||||||| ||||||||| |||| |||| |
|
|
| T |
12099060 |
gtatcatctctataacttttaggtgttataaaataatatcatttgaataggagtgagtctcactagaaacacaatattgtgtctcttgtgcgtgtaagag |
12099159 |
T |
|
| Q |
141 |
agtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttccacgttaaat |
240 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||| ||| ||||||||||||| ||||| |||| |
|
|
| T |
12099160 |
agtggagagaatattgtaatattctttaatatagttgaaattttttcggagtttgtcccttggtttttccttcgtcattagagggtttttcacgtaaaat |
12099259 |
T |
|
| Q |
241 |
attggtgttcannnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagccc |
340 |
Q |
| |
|
|||| | |||| ||||||| || | ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
12099260 |
attgcttttca--tttttatcgctatcggtgagctgcaagatcatatctcttttggattttggaattttaatttacactcgcgttaaactcgtcgagccc |
12099357 |
T |
|
| Q |
341 |
aaca |
344 |
Q |
| |
|
|||| |
|
|
| T |
12099358 |
aaca |
12099361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 194
Target Start/End: Original strand, 12082055 - 12082227
Alignment:
| Q |
21 |
gggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaacactatattgt |
120 |
Q |
| |
|
|||||||||| | | ||| ||||| |||||||||||||||||| |||||||||||||| |||| |||||| || |||||| ||||||||||||||| |
|
|
| T |
12082055 |
gggaaaaatatatcgggtaggtattatctctataacttctaggcgctataaaataataacatttgaataggagcgagtctcattagaaacactatattgt |
12082154 |
T |
|
| Q |
121 |
atctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagttt |
194 |
Q |
| |
|
||||||| | |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
12082155 |
atctcttttccgtgtaagagagtggagaaaatattgtaatattc-ttaatatagtggaatattttttggagttt |
12082227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 107 - 321
Target Start/End: Complemental strand, 2757448 - 2757236
Alignment:
| Q |
107 |
aaacactatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggttt |
206 |
Q |
| |
|
|||||||||||||||||||||| ||||| ||||||||||||||||| || |||||| || |||||||||||||| ||||| | |||||| | |||||| |
|
|
| T |
2757448 |
aaacactatattgtatctcttgagtgtgaaagagagtggagagaatagtgcaatatttttaaatatagtggaata-ttttcaaaatttgtctcatggttt |
2757350 |
T |
|
| Q |
207 |
ttccctcggtattagagggttttccacgttaaatattggtgttcannnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaat |
306 |
Q |
| |
|
|||| | | |||| |||| ||| || ||||||||||||||| | |||| || ||||| ||||| || |||| ||||||| |||||||||| |
|
|
| T |
2757349 |
ttccttaagcattaaaggggttttcatattaaatattggtgtt-aaatttttatcgttattgctacactgcataattcaatttcttttgaattttggaat |
2757251 |
T |
|
| Q |
307 |
tttaatttacacttg |
321 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
2757250 |
tttaatttacacttg |
2757236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 259 - 344
Target Start/End: Original strand, 12084666 - 12084751
Alignment:
| Q |
259 |
atcgctaccgctacgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
|||||||||| | |||| ||||||||||| ||| |||||||||| ||||||||||||| || | ||||||||||| |||||||||| |
|
|
| T |
12084666 |
atcgctaccgttgcgctacaagatccaatgtctattggattttgaaattttaatttaccctcgtgttaagctcgttgagcccaaca |
12084751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 344
Target Start/End: Complemental strand, 29107209 - 29106878
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtggg-tatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaa |
109 |
Q |
| |
|
|||||||||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
29107209 |
cagagagtgtgggaaaaatacattgggtggggtatcatctttataacttctaggtgctaaaaaataatagcattagaatagaagtaggtctcacgggaaa |
29107110 |
T |
|
| Q |
110 |
cactatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttc |
209 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29107109 |
cactat-ttgtatctcttgtgtgtgtaagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttc |
29107011 |
T |
|
| Q |
210 |
cctcggtattagagggttttccacgttaaatattggtgttcannnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaatttt |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
29107010 |
cctcggtattagagggttttccacgttaaatattggtgttca--tttttaacgctaccgctgcgctgcaagatccaatcttttttggattttggaatttt |
29106913 |
T |
|
| Q |
310 |
aatttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
||||||||||||| |||||||| |||| ||||||| |
|
|
| T |
29106912 |
aatttacacttgcattaagctcctcgatcccaaca |
29106878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 345
Target Start/End: Complemental strand, 42911323 - 42910992
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaac |
110 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
42911323 |
cagagagtgtggaaaaaatacactgggtgggtatcatctctataacttcttggtgctataaaataatagcattagaatagaagtaggtctcaagggaaac |
42911224 |
T |
|
| Q |
111 |
actatattgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttttcc |
210 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
42911223 |
actatattgtatcttttgtgtgtgtgagagagtggagagaatattgtaatattcttaaatatagtggaata-ttttcggagtttgtcccgtggtttttcc |
42911125 |
T |
|
| Q |
211 |
ctcggtattagagggttttccacgttaaatattggtgttcannnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaatttta |
310 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||| |||| | ||||| |||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
42911124 |
ctcggtattagagggttttccatgttaaatattggtgttca--tttttatcgttgccgctgcgctgcaagatctaatctcttttggattttaaaatttta |
42911027 |
T |
|
| Q |
311 |
atttacacttgcgttaagctcgtcgagcccaacaa |
345 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
42911026 |
atttccacttgcgttaagctcgtcgagcccaacaa |
42910992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 38997320 - 38997230
Alignment:
| Q |
160 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttc |
250 |
Q |
| |
|
|||||||||||||| |||| ||||||| |||||||||||||| ||||||| ||| ||||||||||||||| |||| |||||||| ||||| |
|
|
| T |
38997320 |
tattctttaatataatggattattttttggagtttgtcccgtagtttttcgttcgatattagagggttttcgacgtaaaatattgctgttc |
38997230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 264 - 345
Target Start/End: Complemental strand, 38994779 - 38994698
Alignment:
| Q |
264 |
taccgctacgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
345 |
Q |
| |
|
||||||| | |||||||||||||| | ||||| |||||||||||||||||||||| || ||||| ||||| |||||||||| |
|
|
| T |
38994779 |
taccgctgcactgcaagatccaattttgtttgggttttggaattttaatttacactagcattaagatcgtcaagcccaacaa |
38994698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 345
Target Start/End: Complemental strand, 38997193 - 38997137
Alignment:
| Q |
289 |
tcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
345 |
Q |
| |
|
||||||||||| |||||||||||||||||| || |||||| | |||| |||||||| |
|
|
| T |
38997193 |
tcttttggattctggaattttaatttacacccgcattaagcccttcgaacccaacaa |
38997137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 11 - 346
Target Start/End: Original strand, 8539214 - 8539550
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaac |
110 |
Q |
| |
|
|||||||||||||||||||||| | | ||||||||||||||||||||| |||||||| ||||||||||||| | |||||| ||| | ||||| || |||| |
|
|
| T |
8539214 |
cagagagtgtgggaaaaatacatcggatgggtatcatctctataacttttaggtgctgtaaaataatagcaatcgaataggagtgggtctcacgg-aaac |
8539312 |
T |
|
| Q |
111 |
actata---ttgtatctcttgtgtgtgtgagagagtggagagaatattgtaatattctttaatatagtggaatatttttcggagtttgtcccgtggtttt |
207 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
8539313 |
actataatattgtatctcttgtgtgtgtaagagagtggagataatattgtaatattcttaaatatagtggaatatctttcggagtttgtcccgtgatttt |
8539412 |
T |
|
| Q |
208 |
tccctcggtattagagggttttccacgttaaatattggtgttcannnnnnnatcgctaccgctacgctgcaagatccaatctcttttggattttggaatt |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||| || | ||||||| ||||||||||||||||||||||| || ||||||||| |
|
|
| T |
8539413 |
tccctcggtattagagggttttccacgttaaatattgatgttca-ttttttattgttaccgctgcgctgcaagatccaatctcttttagaatttggaatt |
8539511 |
T |
|
| Q |
308 |
ttaatttacacttgcgttaagctcgtcgagcccaacaat |
346 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8539512 |
ttaatttacacttgcgttaagctcgtcgagcccaacaat |
8539550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 71; Significance: 5e-32; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 51302192 - 51302306
Alignment:
| Q |
11 |
cagagagtgtgggaaaaatacaccaggtgggtatcatctctataacttctaggtgctataaaataatagcattagaatagaagtagatctcatgggaaac |
110 |
Q |
| |
|
|||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||| ||| | ||||| ||||||| |
|
|
| T |
51302192 |
cagagagtgtggataaaatacaccgggtgggaatcatctctataacttctaggtgctataaaacaattgcattcgaataggagtgggtctcacgggaaac |
51302291 |
T |
|
| Q |
111 |
actatattgtatctc |
125 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
51302292 |
actatattgtatctc |
51302306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 262 - 345
Target Start/End: Original strand, 51302937 - 51303020
Alignment:
| Q |
262 |
gctaccgctacgctgcaagatccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaacaa |
345 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
51302937 |
gctaccgctgcgctgcaagatccaatctgttttggattttgaaattttaatttacacttgcattaagctcgtcgatcccaacaa |
51303020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 51302304 - 51302344
Alignment:
| Q |
211 |
ctcggtattagagggttttccacgttaaatattggtgttca |
251 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51302304 |
ctcggtattagagggttttccacgttaaatattggtgttca |
51302344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 160 - 344
Target Start/End: Complemental strand, 2100379 - 2100199
Alignment:
| Q |
160 |
tattctttaatatagtggaatatttttcggagtttgtcccgtggtttttccctcggtattagagggttttccacgttaaatattggtgttcannnnnnna |
259 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| ||||||| ||| ||||| |||||||||||| |||||||||| |||||| | |
|
|
| T |
2100379 |
tattctttaatatagtggaatatttttcggagtttgcccc---gtttttcgctcattattaaagggttttccaccttaaatattgatgttca--atttta |
2100285 |
T |
|
| Q |
260 |
tcgctaccgctacgctgcaaga-tccaatctcttttggattttggaattttaatttacacttgcgttaagctcgtcgagcccaaca |
344 |
Q |
| |
|
|| || || | ||||||| | || |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
2100284 |
tcattatcgttgtgctgcaaaattcaaatctcttatgaattttggaattttaatttacacttgtgttaagctcgtcgagcccaaca |
2100199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 2100771 - 2100723
Alignment:
| Q |
119 |
gtatctcttgtgtgtgtgagagagtggagagaatattgtaatattcttt |
167 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2100771 |
gtatctcttgtgtatgtaagagagtggagagaatattgtaatattcttt |
2100723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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