View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17304_low_13 (Length: 341)
Name: NF17304_low_13
Description: NF17304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17304_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 16 - 276
Target Start/End: Complemental strand, 30836862 - 30836604
Alignment:
| Q |
16 |
gactttcataactagatttcgtaactatttatatagatgatgagagaaaactaagaactccaaatatatataactatgtatacaacaaacatttatagca |
115 |
Q |
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| T |
30836862 |
gactttcataactagatttcgtaactatttatatagatgatgagagaaaactaagaactccaaatatatataactatgtatacaacaaacatttatagca |
30836763 |
T |
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| Q |
116 |
taagcatacaataaaaaagctcatgcactgcataaattgatcataacatatgtttacaagaccattaaactaattttctttcatgtaaaatagatgtaga |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
30836762 |
taagcatacaataaaaaagctcatgcactgcataaattgatcataacatatgtttacaagaccattaaacttattttctttcatgtaaaatagatgtaga |
30836663 |
T |
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| Q |
216 |
taatagaaatgaaattaactnnnnnnnttgttgcaacttattaatcacctgattactaaat |
276 |
Q |
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|||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
30836662 |
taatag--atgaaattaaccaaaaaaattgttgcaacttattaatcacctgattactaaat |
30836604 |
T |
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