View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17304_low_22 (Length: 248)
Name: NF17304_low_22
Description: NF17304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17304_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 40497638 - 40497412
Alignment:
| Q |
1 |
ttgtatttgttgaagctgaagcgaactgtatggtggaggatttgagtgatgtgaaggagcctgaccttgatattcttagaaaactagtttatgacattcc |
100 |
Q |
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| T |
40497638 |
ttgtatttgttgaagctgaagcgaactgtatggtggaggatttgagtgatgtgaaggagcctgaccttgatattcttagaaaactagtttatgacatccc |
40497539 |
T |
|
| Q |
101 |
tactgcaaagaacttactagagatgcctccacttctaattcaggtttttgtttatatttacattgtcatgaaattcgatgtttgttaaattaaagaactc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
40497538 |
tactgcaaagaacttactagagatgcctccacttctaattcaggtttttgtttatatttacattgtcatgaaatttgatgtttgttaaattaaagaactc |
40497439 |
T |
|
| Q |
201 |
ttgttaaagaacttactgacttattag |
227 |
Q |
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||||||||||||| ||||||||||||| |
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| T |
40497438 |
ttgttaaagaactcactgacttattag |
40497412 |
T |
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