View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17305_low_5 (Length: 410)

Name: NF17305_low_5
Description: NF17305
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17305_low_5
NF17305_low_5
[»] chr2 (24 HSPs)
chr2 (18-279)||(18508716-18508977)
chr2 (25-138)||(18490356-18490469)
chr2 (18-129)||(18515017-18515128)
chr2 (227-279)||(3888876-3888928)
chr2 (227-279)||(11122649-11122701)
chr2 (354-402)||(18508596-18508644)
chr2 (227-279)||(23926648-23926700)
chr2 (227-281)||(3889126-3889180)
chr2 (227-281)||(22196178-22196232)
chr2 (233-279)||(29421704-29421750)
chr2 (227-279)||(10192342-10192394)
chr2 (227-279)||(28788872-28788924)
chr2 (227-279)||(30488085-30488137)
chr2 (227-270)||(42950524-42950567)
chr2 (227-269)||(9027292-9027334)
chr2 (227-273)||(9912176-9912222)
chr2 (227-281)||(26499427-26499481)
chr2 (227-279)||(9911914-9911966)
chr2 (227-279)||(10714265-10714317)
chr2 (227-279)||(20663915-20663967)
chr2 (227-279)||(26499668-26499720)
chr2 (227-279)||(28789124-28789176)
chr2 (227-279)||(30488337-30488389)
chr2 (227-279)||(35412134-35412186)
[»] chr8 (12 HSPs)
chr8 (227-279)||(8156714-8156766)
chr8 (227-279)||(39198873-39198925)
chr8 (227-278)||(33278940-33278991)
chr8 (227-270)||(41617053-41617096)
chr8 (227-279)||(21660731-21660783)
chr8 (227-279)||(27713021-27713073)
chr8 (227-279)||(29596407-29596459)
chr8 (227-279)||(30253631-30253683)
chr8 (227-279)||(33279195-33279247)
chr8 (235-279)||(33526953-33526997)
chr8 (227-279)||(38123117-38123169)
chr8 (227-279)||(43497212-43497264)
[»] chr7 (22 HSPs)
chr7 (227-279)||(7173188-7173240)
chr7 (227-281)||(29099429-29099483)
chr7 (227-279)||(2699874-2699926)
chr7 (227-279)||(7149548-7149600)
chr7 (227-279)||(31813735-31813787)
chr7 (227-279)||(45867702-45867754)
chr7 (355-392)||(34287642-34287679)
chr7 (355-392)||(45867571-45867608)
chr7 (227-279)||(7149296-7149348)
chr7 (227-279)||(8806001-8806053)
chr7 (235-279)||(8949549-8949593)
chr7 (227-279)||(12423850-12423902)
chr7 (227-279)||(12424103-12424155)
chr7 (227-279)||(21733073-21733125)
chr7 (227-279)||(28588322-28588374)
chr7 (227-279)||(34287521-34287573)
chr7 (227-279)||(38495171-38495223)
chr7 (227-279)||(41922287-41922339)
chr7 (227-279)||(42391301-42391353)
chr7 (227-279)||(44458041-44458093)
chr7 (227-279)||(45055579-45055631)
chr7 (227-279)||(45062319-45062371)
[»] chr6 (20 HSPs)
chr6 (227-279)||(9220360-9220412)
chr6 (227-270)||(3011917-3011960)
chr6 (234-279)||(20028030-20028075)
chr6 (218-279)||(28852445-28852506)
chr6 (227-279)||(9220108-9220160)
chr6 (227-279)||(9546668-9546720)
chr6 (227-279)||(12240738-12240790)
chr6 (227-279)||(20027778-20027830)
chr6 (227-279)||(24325250-24325302)
chr6 (227-269)||(685220-685262)
chr6 (227-281)||(1925406-1925460)
chr6 (227-281)||(7279558-7279612)
chr6 (227-279)||(2316746-2316798)
chr6 (227-279)||(8129790-8129842)
chr6 (235-279)||(9546423-9546467)
chr6 (227-279)||(9899200-9899252)
chr6 (227-279)||(9899452-9899504)
chr6 (227-279)||(12240485-12240537)
chr6 (227-279)||(17853900-17853952)
chr6 (227-279)||(21926069-21926121)
[»] chr4 (28 HSPs)
chr4 (227-279)||(18568029-18568081)
chr4 (354-402)||(23962988-23963036)
chr4 (227-279)||(7067499-7067551)
chr4 (227-279)||(9902913-9902965)
chr4 (227-279)||(16019962-16020014)
chr4 (227-279)||(35130796-35130848)
chr4 (227-279)||(35131053-35131105)
chr4 (227-279)||(38555947-38555999)
chr4 (227-279)||(43781328-43781380)
chr4 (227-279)||(45801224-45801276)
chr4 (227-279)||(49387439-49387491)
chr4 (355-402)||(18635966-18636013)
chr4 (227-270)||(44834984-44835027)
chr4 (227-281)||(25331820-25331874)
chr4 (355-392)||(9644883-9644920)
chr4 (355-392)||(45801344-45801381)
chr4 (227-279)||(9902658-9902710)
chr4 (227-279)||(20984171-20984223)
chr4 (227-279)||(32922072-32922124)
chr4 (227-279)||(32922324-32922376)
chr4 (227-275)||(37068690-37068738)
chr4 (227-279)||(44551172-44551224)
chr4 (227-279)||(45655698-45655750)
chr4 (235-279)||(46648280-46648324)
chr4 (227-279)||(52537884-52537936)
chr4 (227-279)||(52538136-52538188)
chr4 (227-279)||(52653936-52653988)
chr4 (227-279)||(52654189-52654241)
[»] scaffold0009 (1 HSPs)
scaffold0009 (227-270)||(258760-258803)
[»] chr1 (26 HSPs)
chr1 (227-270)||(46283406-46283449)
chr1 (227-281)||(17504040-17504094)
chr1 (227-279)||(26095493-26095545)
chr1 (227-281)||(8853350-8853404)
chr1 (233-279)||(10296603-10296649)
chr1 (233-279)||(50208369-50208415)
chr1 (227-276)||(8853101-8853150)
chr1 (227-276)||(25012907-25012956)
chr1 (227-279)||(1501776-1501828)
chr1 (227-279)||(4695193-4695245)
chr1 (227-279)||(5586744-5586796)
chr1 (227-279)||(5618076-5618128)
chr1 (227-279)||(6488876-6488928)
chr1 (227-279)||(8828581-8828633)
chr1 (227-279)||(12649927-12649979)
chr1 (227-271)||(26095755-26095799)
chr1 (227-279)||(28554195-28554247)
chr1 (227-279)||(31289259-31289311)
chr1 (235-279)||(32694565-32694609)
chr1 (227-279)||(34480189-34480241)
chr1 (235-279)||(40770153-40770197)
chr1 (227-279)||(45286237-45286289)
chr1 (227-279)||(45286489-45286541)
chr1 (227-279)||(45569020-45569071)
chr1 (227-279)||(46283659-46283711)
chr1 (235-279)||(50208613-50208657)
[»] chr5 (20 HSPs)
chr5 (227-281)||(7610517-7610571)
chr5 (353-402)||(23226732-23226781)
chr5 (227-279)||(2426487-2426539)
chr5 (227-279)||(18707268-18707320)
chr5 (227-279)||(24858660-24858712)
chr5 (227-279)||(31485962-31486014)
chr5 (244-281)||(13577518-13577555)
chr5 (227-279)||(1643544-1643596)
chr5 (227-279)||(7601598-7601650)
chr5 (227-279)||(7601850-7601902)
chr5 (227-279)||(13697575-13697627)
chr5 (227-279)||(14871739-14871791)
chr5 (235-279)||(14871992-14872036)
chr5 (227-279)||(16736806-16736858)
chr5 (227-279)||(19131127-19131179)
chr5 (235-279)||(33381442-33381486)
chr5 (227-279)||(33429790-33429842)
chr5 (227-279)||(39589620-39589672)
chr5 (235-279)||(40881475-40881519)
chr5 (227-279)||(40952072-40952124)
[»] chr3 (28 HSPs)
chr3 (218-279)||(29434297-29434358)
chr3 (227-279)||(14202053-14202105)
chr3 (227-279)||(15543256-15543308)
chr3 (227-279)||(38674986-38675038)
chr3 (227-279)||(44036692-44036744)
chr3 (227-279)||(50710708-50710760)
chr3 (235-281)||(36546334-36546380)
chr3 (235-281)||(36561934-36561980)
chr3 (229-279)||(49002495-49002545)
chr3 (355-392)||(11439951-11439988)
chr3 (354-402)||(2397927-2397975)
chr3 (227-279)||(11220997-11221049)
chr3 (227-279)||(11221249-11221301)
chr3 (235-279)||(11439814-11439858)
chr3 (213-281)||(11575941-11576009)
chr3 (235-279)||(12123507-12123551)
chr3 (227-279)||(14463380-14463432)
chr3 (227-279)||(18169011-18169063)
chr3 (227-279)||(20209155-20209207)
chr3 (227-279)||(21016926-21016978)
chr3 (227-279)||(25061535-25061587)
chr3 (227-279)||(27812828-27812880)
chr3 (235-279)||(28843742-28843786)
chr3 (227-279)||(31574256-31574308)
chr3 (235-279)||(35415499-35415543)
chr3 (227-279)||(45214381-45214433)
chr3 (227-279)||(46292839-46292891)
chr3 (227-279)||(50711252-50711304)
[»] scaffold0077 (1 HSPs)
scaffold0077 (227-279)||(10176-10228)
[»] scaffold0024 (1 HSPs)
scaffold0024 (227-279)||(107857-107909)
[»] scaffold0019 (1 HSPs)
scaffold0019 (233-279)||(44881-44927)
[»] scaffold0003 (2 HSPs)
scaffold0003 (227-269)||(323427-323469)
scaffold0003 (227-279)||(323669-323721)
[»] scaffold0592 (1 HSPs)
scaffold0592 (227-279)||(8645-8697)


Alignment Details
Target: chr2 (Bit Score: 168; Significance: 6e-90; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 18 - 279
Target Start/End: Complemental strand, 18508977 - 18508716
Alignment:
Q  18 catgaggtcttgcctcaagcacatctagataccaattgtgtaaatcaaatttggtacttggaacactgaaataaatatttccatctgatgcttctattat 117  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  18508977 catgtggtcttgcctcaagcacatctagataccaattgtgtaaaccaaatttggtacttggtacactgaaatatatatttccatctgatgcttctattat 18508878  T
Q  118 atcatctgcaaatctgcttcaaataactcattagaaaagtcaagtaacccttacnnnnnnnnnnnnnnnnnntttaaatatctaaagaagggagaaaata 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||                  ||||||||||||||||||||||||||||    
T  18508877 atcatctgcaaatctgcttcaaataactcattagaaaagtcaagtaacccttactatattattattattatttttaaatatctaaagaagggagaaaata 18508778  T
Q  218 ttaaggttcaattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    |||||| | ||||| |||||||||| |||||||||||||||||||||| |||| ||||||||    
T  18508777 ttaaggctaaattacacttttaatcccttaacttaatttcagctaacaatttggtcttttat 18508716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 25 - 138
Target Start/End: Complemental strand, 18490469 - 18490356
Alignment:
Q  25 tcttgcctcaagcacatctagataccaattgtgtaaatcaaatttggtacttggaacactgaaataaatatttccatctgatgcttctattatatcatct 124  Q
    |||||||||||||||||| | |||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18490469 tcttgcctcaagcacatccaaataccaattgtgcataccaaatttggtacttggaacactgaaataaatatttccatctgatgcttctattacatcatct 18490370  T
Q  125 gcaaatctgcttca 138  Q
    ||||| ||| ||||    
T  18490369 gcaaacctggttca 18490356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 18515128 - 18515017
Alignment:
Q  18 catgaggtcttgcctcaagcacatctagataccaattgtgtaaatcaaatttggtacttggaacactgaaataaatatttccatctgatgcttctattat 117  Q
    |||||||||||||||| |||| ||| | |||||||| ||||||| |||||||| ||||   ||||||||| || |||||||||||||||||||||||||     
T  18515128 catgaggtcttgcctctagcaaatccaaataccaatcgtgtaaaccaaatttgttactaccaacactgaagtatatatttccatctgatgcttctattac 18515029  T
Q  118 atcatctgcaaa 129  Q
    |||||| |||||    
T  18515028 atcatcggcaaa 18515017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 3888876 - 3888928
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||| ||||| || |||||||||||||||| |||||||||||||||||||    
T  3888876 aattatatttttagtcccttaacttaatttcaggtaacagtttgatcttttat 3888928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 11122649 - 11122701
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||| ||||||||||||||||||||||||| |||||||||| || |||||    
T  11122649 aattatatttttaatctcttaacttaatttcaggtaacagtttggtcctttat 11122701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 18508644 - 18508596
Alignment:
Q  354 gttttattttcttatgacctttccatcttcaaatctatggctttcatct 402  Q
    |||||||||||||||||||||| |||||| ||||||||||| |||||||    
T  18508644 gttttattttcttatgaccttttcatctttaaatctatggccttcatct 18508596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 23926700 - 23926648
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| ||||| |||||||||||||    
T  23926700 aattacacttttaatcccttaacttaatttcaggtaacaatttgatcttttat 23926648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 3889180 - 3889126
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttattt 281  Q
    ||||| ||||||| || |||||||||||||||| ||||||||||||| |||||||    
T  3889180 aattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttattt 3889126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 22196232 - 22196178
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttattt 281  Q
    ||||||| ||||| |||||||||||||||| || ||||||||||||| |||||||    
T  22196232 aattatatttttagtctcttaacttaattttaggtaacagtttgatcctttattt 22196178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 29421704 - 29421750
Alignment:
Q  233 acttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||| || |||||||||||||||||||||||||||||| |||||    
T  29421704 acttttagtcccttaacttaatttcagctaacagtttgatcctttat 29421750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 10192394 - 10192342
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    |||||||||||||||| |||||||||||||||  ||||| ||||||| |||||    
T  10192394 aattatacttttaatcccttaacttaatttcaaataacaatttgatcctttat 10192342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 28788872 - 28788924
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| || |||||    
T  28788872 aattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttat 28788924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 30488085 - 30488137
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| ||||| ||||||| |||||    
T  30488085 aattacacttttaatcccttaacttaatttcaggtaacaatttgatcatttat 30488137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 42950524 - 42950567
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttg 270  Q
    ||||||| ||||||||||||||||||||||||| ||||| ||||    
T  42950524 aattatatttttaatctcttaacttaatttcagataacattttg 42950567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 9027334 - 9027292
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagttt 269  Q
    ||||| |||||||||| |||||||||||||||| |||||||||    
T  9027334 aattacacttttaatcccttaacttaatttcaggtaacagttt 9027292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 9912222 - 9912176
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatc 273  Q
    ||||| |||||||||| ||||||||||||| || |||||||||||||    
T  9912222 aattacacttttaatcccttaacttaattttaggtaacagtttgatc 9912176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 26499427 - 26499481
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttattt 281  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||||    
T  26499427 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttattt 26499481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 9911914 - 9911966
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  9911914 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 9911966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 10714317 - 10714265
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  10714317 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttat 10714265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 20663967 - 20663915
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  20663967 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 20663915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 26499720 - 26499668
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  26499720 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 26499668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 28789176 - 28789124
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  28789176 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 28789124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 30488389 - 30488337
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  30488389 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 30488337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 35412186 - 35412134
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  35412186 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 35412134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 8156714 - 8156766
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||| |||||    
T  8156714 aattatacttttagtctcttaacttaatttcaagtaacagtttgatcctttat 8156766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 39198925 - 39198873
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| |||||||||| || |||||    
T  39198925 aattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttat 39198873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 278
Target Start/End: Original strand, 33278940 - 33278991
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatctttta 278  Q
    ||||| ||||||| ||||||||||||||||||| ||||| |||| |||||||    
T  33278940 aattacacttttagtctcttaacttaatttcaggtaacaatttggtctttta 33278991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 41617053 - 41617096
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttg 270  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||||    
T  41617053 aattacacttttagtctcttaacttaatttcagataacagtttg 41617096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 21660731 - 21660783
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  21660731 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 21660783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 27713073 - 27713021
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  27713073 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 27713021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 29596407 - 29596459
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  29596407 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 29596459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 30253631 - 30253683
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  30253631 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttat 30253683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 33279247 - 33279195
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  33279247 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 33279195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 33526953 - 33526997
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| || |||||||||||||||| |||||||||| ||||||||    
T  33526953 ttttagtcccttaacttaatttcagataacagtttggtcttttat 33526997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 38123117 - 38123169
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    |||||||||||||||| ||||||||||||||   | | |||||||||||||||    
T  38123117 aattatacttttaatcccttaacttaatttcgaatgatagtttgatcttttat 38123169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 43497212 - 43497264
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||||||||| || ||||||||||||| || ||||| ||||||| |||||    
T  43497212 aattatacttttagtcccttaacttaattttagataacaatttgatcctttat 43497264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 7173240 - 7173188
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||| |||||    
T  7173240 aattacacttttaatcccttaacttaatttcaggtaacagtttgatcctttat 7173188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 29099483 - 29099429
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttattt 281  Q
    ||||| ||||||| || |||||||||||||||| ||||||||||||| |||||||    
T  29099483 aattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttattt 29099429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 2699926 - 2699874
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| || |||||    
T  2699926 aattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttat 2699874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 7149600 - 7149548
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| || |||||    
T  7149600 aattacacttttagtctcttaacttaatttcagataacagtttggtcatttat 7149548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 31813735 - 31813787
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| |||||||||| || |||||    
T  31813735 aattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttat 31813787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 45867754 - 45867702
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| |||||||||| || |||||    
T  45867754 aattacacttttaatcccttaacttaatttcaggtaacagtttggtcatttat 45867702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 34287642 - 34287679
Alignment:
Q  355 ttttattttcttatgacctttccatcttcaaatctatg 392  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  34287642 ttttattttcttatgatctttcaatcttcaaatctatg 34287679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 45867571 - 45867608
Alignment:
Q  355 ttttattttcttatgacctttccatcttcaaatctatg 392  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  45867571 ttttattttcttatgatctttcaatcttcaaatctatg 45867608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 7149296 - 7149348
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  7149296 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 7149348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 8806053 - 8806001
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  8806053 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 8806001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 8949593 - 8949549
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| || |||||||||||||||| |||||||||| ||||||||    
T  8949593 ttttagtcccttaacttaatttcagataacagtttggtcttttat 8949549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 12423850 - 12423902
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  12423850 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 12423902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 12424155 - 12424103
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  12424155 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 12424103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 21733073 - 21733125
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||| ||| || |||||||||||||||| |||||||||| ||||||||    
T  21733073 aattacactattagtcccttaacttaatttcaggtaacagtttggtcttttat 21733125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 28588322 - 28588374
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| ||  ||||||||||||||| |||||||||| ||||||||    
T  28588322 aattacacttttagtcctttaacttaatttcaggtaacagtttggtcttttat 28588374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 34287521 - 34287573
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| |||||||||||||||| || |||||||||| || |||||    
T  34287521 aattacacttttactctcttaacttaattttaggtaacagtttggtcctttat 34287573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 38495223 - 38495171
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  38495223 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 38495171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 41922287 - 41922339
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  41922287 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 41922339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 42391301 - 42391353
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  42391301 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 42391353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 44458093 - 44458041
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  44458093 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 44458041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 45055631 - 45055579
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  45055631 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 45055579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 45062371 - 45062319
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  45062371 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 45062319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 9220412 - 9220360
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  9220412 aattacacttttaatctcttaacttaatttcaggtaagagtttggtcttttat 9220360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 3011917 - 3011960
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttg 270  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||    
T  3011917 aattatacttttagtctcttaacttaatttcaggtaacagtttg 3011960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 20028075 - 20028030
Alignment:
Q  234 cttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  20028075 cttttagtctcttaacttaatttcaggtaacagtttggtcttttat 20028030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 28852506 - 28852445
Alignment:
Q  218 ttaaggttcaattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||| |||||| | ||||| |||||||| ||||||| || |||||||||||||||||||    
T  28852506 ttaaggtacaattacatttttagtctcttaaattaattttaggtaacagtttgatcttttat 28852445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 9220108 - 9220160
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| ||||||||||||| |||||    
T  9220108 aattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttat 9220160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 9546720 - 9546668
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| ||||||||||||| |||||    
T  9546720 aattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttat 9546668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 12240790 - 12240738
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| || |||||    
T  12240790 aattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttat 12240738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 20027778 - 20027830
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||| ||||| ||  ||||||||||||||| |||||||||||||||||||    
T  20027778 aattatatttttagtccattaacttaatttcaggtaacagtttgatcttttat 20027830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 24325302 - 24325250
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| |||||||||| || |||||    
T  24325302 aattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttat 24325250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 685262 - 685220
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagttt 269  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||    
T  685262 aattacacttttagtctcttaacttaatttcaggtaacagttt 685220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 1925460 - 1925406
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttattt 281  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||||    
T  1925460 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttattt 1925406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 7279558 - 7279612
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttattt 281  Q
    ||||| ||||||| | ||||||||||||||||  ||||||||||||| |||||||    
T  7279558 aattacacttttagtttcttaacttaatttcaagtaacagtttgatcatttattt 7279612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 2316798 - 2316746
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  2316798 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 2316746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 8129842 - 8129790
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| || ||||||| |||||||||||||||| |||||||||| || |||||    
T  8129842 aattacacatttaatcccttaacttaatttcaggtaacagtttggtcatttat 8129790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 9546423 - 9546467
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| || |||||||||||||||| |||||||||| ||||||||    
T  9546423 ttttagtcccttaacttaatttcaggtaacagtttggtcttttat 9546467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 9899200 - 9899252
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  9899200 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 9899252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 9899504 - 9899452
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  9899504 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 9899452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 12240485 - 12240537
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| ||| |||||||||||| || ||||||||||||| |||||    
T  12240485 aattacacttttagtcttttaacttaattttaggtaacagtttgatcctttat 12240537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 17853952 - 17853900
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  17853952 aattacacttttagtcccttaacttaatttcagataacagtttggtcctttat 17853900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 21926069 - 21926121
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  21926069 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 21926121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 18568029 - 18568081
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || |||||    
T  18568029 aattacacttttaatctcttaacttaatttcagataacagtttggtcctttat 18568081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 23963036 - 23962988
Alignment:
Q  354 gttttattttcttatgacctttccatcttcaaatctatggctttcatct 402  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||||||    
T  23963036 gttttattttcttatgacatttcaatcttcaaatctatggttttcatct 23962988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 7067551 - 7067499
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| ||||||||||||| |||||    
T  7067551 aattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttat 7067499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 9902965 - 9902913
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| |||||||||| || |||||    
T  9902965 aattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttat 9902913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 16019962 - 16020014
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| ||||||||||||| |||||    
T  16019962 aattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttat 16020014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 35130796 - 35130848
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| |||||||||| || |||||    
T  35130796 aattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttat 35130848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 35131105 - 35131053
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| |||||||||| || |||||    
T  35131105 aattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttat 35131053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 38555947 - 38555999
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| ||||||||||||| |||||    
T  38555947 aattacacttttagtcccttaacttaatttcagataacagtttgatcctttat 38555999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 43781380 - 43781328
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||||||||||||||||||||||||| ||| |||||  ||| ||||||||    
T  43781380 aattatacttttaatctcttaacttaattgcagataacaagttggtcttttat 43781328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 45801224 - 45801276
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||||||||| |||||||| |||||||||| |||||||||| || |||||    
T  45801224 aattatacttttagtctcttaatttaatttcaggtaacagtttggtcctttat 45801276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 49387491 - 49387439
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||||||||| || |||||||||||||||| |||||||||| || |||||    
T  49387491 aattatacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 49387439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 402
Target Start/End: Original strand, 18635966 - 18636013
Alignment:
Q  355 ttttattttcttatgacctttccatcttcaaatctatggctttcatct 402  Q
    |||||||||||||||||||||| ||||||||||| ||||  |||||||    
T  18635966 ttttattttcttatgacctttcaatcttcaaatccatggtcttcatct 18636013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 44834984 - 44835027
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttg 270  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||    
T  44834984 aattacacttttaatcccttaacttaatttcaggtaacagtttg 44835027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 25331820 - 25331874
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttattt 281  Q
    ||||| ||||||| || |||||||||||||||| ||||| ||||||| |||||||    
T  25331820 aattacacttttagtcccttaacttaatttcaggtaacaatttgatcctttattt 25331874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 9644883 - 9644920
Alignment:
Q  355 ttttattttcttatgacctttccatcttcaaatctatg 392  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  9644883 ttttattttcttatggcctttccgtcttcaaatctatg 9644920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 392
Target Start/End: Original strand, 45801344 - 45801381
Alignment:
Q  355 ttttattttcttatgacctttccatcttcaaatctatg 392  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  45801344 ttttattttcttatgatctttcaatcttcaaatctatg 45801381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 9902658 - 9902710
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  9902658 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 9902710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 20984223 - 20984171
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  20984223 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 20984171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 32922072 - 32922124
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  32922072 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttat 32922124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 32922376 - 32922324
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  32922376 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 32922324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 37068690 - 37068738
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatctt 275  Q
    ||||| ||||||| || ||||||||||||| || |||||||||||||||    
T  37068690 aattacacttttagtcccttaacttaattttaggtaacagtttgatctt 37068738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 44551224 - 44551172
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  44551224 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 44551172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 45655698 - 45655750
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| ||||||||||||||||||| ||||| |||  ||||||||    
T  45655698 aattacacttttagtctcttaacttaatttcaggtaacaattttgtcttttat 45655750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 46648324 - 46648280
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| || |||||||||||||||| ||||||||||||| |||||    
T  46648324 ttttagtcccttaacttaatttcaggtaacagtttgatcatttat 46648280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 52537884 - 52537936
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  52537884 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 52537936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 52538188 - 52538136
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  52538188 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 52538136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 52653936 - 52653988
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  52653936 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 52653988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 52654241 - 52654189
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  52654241 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 52654189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 258760 - 258803
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttg 270  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
T  258760 aattatacttttaatcccttaacttaatttcaggtaacagtttg 258803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000004; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 46283406 - 46283449
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttg 270  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||    
T  46283406 aattacacttttaatctcttaacttaatttcagataacagtttg 46283449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 17504040 - 17504094
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttattt 281  Q
    ||||| ||||||| || |||||||||||||||| ||||||||||||| |||||||    
T  17504040 aattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttattt 17504094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 26095493 - 26095545
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||||||||| || |||||||||||||||| |||||||||| || |||||    
T  26095493 aattatacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 26095545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 8853404 - 8853350
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttattt 281  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||||    
T  8853404 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttattt 8853350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 10296603 - 10296649
Alignment:
Q  233 acttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||| || |||||||||||||||| |||||||||| ||||||||    
T  10296603 acttttagtcccttaacttaatttcaggtaacagtttggtcttttat 10296649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 50208369 - 50208415
Alignment:
Q  233 acttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||| ||||||||||||||||||| ||||| ||||||| |||||    
T  50208369 acttttagtctcttaacttaatttcagataacaatttgatcctttat 50208415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Original strand, 8853101 - 8853150
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttt 276  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| |||||    
T  8853101 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcttt 8853150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 276
Target Start/End: Complemental strand, 25012956 - 25012907
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttt 276  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| |||||    
T  25012956 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcttt 25012907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 1501828 - 1501776
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||||||||| || ||||| |||||||||| |||||||||| || |||||    
T  1501828 aattatacttttagtcccttaatttaatttcaggtaacagtttggtcctttat 1501776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 4695245 - 4695193
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  4695245 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 4695193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 5586796 - 5586744
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  5586796 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttat 5586744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 5618076 - 5618128
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  5618076 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 5618128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 6488876 - 6488928
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  6488876 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttat 6488928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 8828581 - 8828633
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| ||||||||| ||| |||||    
T  8828581 aattacacttttagtcccttaacttaatttcaggtaacagtttaatcctttat 8828633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 12649927 - 12649979
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  12649927 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 12649979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 26095799 - 26095755
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttga 271  Q
    ||||| ||||||| || |||||||||||||||| |||||||||||    
T  26095799 aattacacttttagtcccttaacttaatttcaggtaacagtttga 26095755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 28554195 - 28554247
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  28554195 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 28554247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 31289259 - 31289311
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  31289259 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 31289311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 32694609 - 32694565
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||||||||||||||| |||||||||| || |||||    
T  32694609 ttttagtctcttaacttaatttcaggtaacagtttggtcctttat 32694565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 34480189 - 34480241
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  34480189 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 34480241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 40770153 - 40770197
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||||||||||||||| |||||||| | ||||||||    
T  40770153 ttttagtctcttaacttaatttcaggtaacagttgggtcttttat 40770197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 45286237 - 45286289
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| ||||||||||||||||||| ||||| |||| || |||||    
T  45286237 aattacacttttagtctcttaacttaatttcaggtaacaatttggtcctttat 45286289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 45286541 - 45286489
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||| ||||| |  |||||||||||||||| ||||||||||||| |||||    
T  45286541 aattatatttttagttccttaacttaatttcagataacagtttgatcctttat 45286489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 45569020 - 45569071
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| ||| ||||||||||||||| |||||||||| ||||||||    
T  45569020 aattacacttttagtct-ttaacttaatttcaggtaacagtttggtcttttat 45569071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 46283711 - 46283659
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || ||||| |||||||||| ||||||||||||| |||||    
T  46283711 aattacacttttagtcccttaatttaatttcagataacagtttgatcctttat 46283659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 50208657 - 50208613
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    |||||||| |||||||||||||||| |||||||||| || |||||    
T  50208657 ttttaatcccttaacttaatttcagataacagtttggtcctttat 50208613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 7610571 - 7610517
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttattt 281  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| || |||||||    
T  7610571 aattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttattt 7610517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 402
Target Start/End: Original strand, 23226732 - 23226781
Alignment:
Q  353 agttttattttcttatgacctttccatcttcaaatctatggctttcatct 402  Q
    |||||||||||||||||||||||| ||||| ||||||||||  |||||||    
T  23226732 agttttattttcttatgacctttcaatctttaaatctatggtcttcatct 23226781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 2426539 - 2426487
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| ||||||||    
T  2426539 aattacacttttagtcccttaacttaatttcagataacagtttggtcttttat 2426487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 18707268 - 18707320
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||||||  ||||||||||||||| |||||||||| ||||||||    
T  18707268 aattacacttttaatcctttaacttaatttcaggtaacagtttggtcttttat 18707320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 24858712 - 24858660
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| ||||||||||| |||| ||||||||||||| |||||    
T  24858712 aattacacttttaatcccttaacttaatgtcaggtaacagtttgatcctttat 24858660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 31485962 - 31486014
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||| || |||||    
T  31485962 aattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttat 31486014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 281
Target Start/End: Complemental strand, 13577555 - 13577518
Alignment:
Q  244 cttaacttaatttcagctaacagtttgatcttttattt 281  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  13577555 cttaacttaatttcaggtaacagtttgatcctttattt 13577518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 1643544 - 1643596
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  1643544 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 1643596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 7601598 - 7601650
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||| ||||| || |||||||||||||||| |||||||||| || |||||    
T  7601598 aattatatttttagtcccttaacttaatttcaggtaacagtttggtcctttat 7601650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 7601902 - 7601850
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  7601902 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcatttat 7601850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 13697627 - 13697575
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| |||||| ||| || |||||    
T  13697627 aattacacttttaatcccttaacttaatttcagataacagattggtcatttat 13697575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 14871739 - 14871791
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  14871739 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 14871791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 14872036 - 14871992
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    |||||||| |||||||||||||||| |||||||||| || |||||    
T  14872036 ttttaatcccttaacttaatttcaggtaacagtttggtcctttat 14871992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 16736806 - 16736858
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  16736806 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 16736858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 19131179 - 19131127
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  19131179 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 19131127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 33381442 - 33381486
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| || |||||||||||||||| |||||||||| ||||||||    
T  33381442 ttttagtcccttaacttaatttcaggtaacagtttggtcttttat 33381486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 33429842 - 33429790
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  33429842 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 33429790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 39589620 - 39589672
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  39589620 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 39589672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 40881475 - 40881519
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| || ||| |||||||||||| |||||||||||||||||||    
T  40881475 ttttagtcccttgacttaatttcagataacagtttgatcttttat 40881519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 40952072 - 40952124
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  40952072 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 40952124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000006; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 279
Target Start/End: Original strand, 29434297 - 29434358
Alignment:
Q  218 ttaaggttcaattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    |||||||  ||||||||||||| || |||||||||||||||| ||||| ||||||| |||||    
T  29434297 ttaaggtaaaattatacttttagtcccttaacttaatttcaggtaacaatttgatcctttat 29434358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 14202105 - 14202053
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| ||||||||||||| |||||    
T  14202105 aattacacttttagtcccttaacttaatttcagataacagtttgatcctttat 14202053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 15543308 - 15543256
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| ||||||||||||| |||||    
T  15543308 aattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttat 15543256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 38674986 - 38675038
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| |||||||||| || |||||    
T  38674986 aattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttat 38675038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 44036692 - 44036744
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||| |||||||| |||||||||||||||| |||||||||| || |||||    
T  44036692 aattatagttttaatcccttaacttaatttcaggtaacagtttggtcctttat 44036744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 50710708 - 50710760
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| ||||||||    
T  50710708 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcttttat 50710760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 36546380 - 36546334
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttattt 281  Q
    ||||| ||| ||||||||||||||| ||||||||||||| |||||||    
T  36546380 ttttagtcttttaacttaatttcaggtaacagtttgatcctttattt 36546334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 36561934 - 36561980
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttattt 281  Q
    ||||| ||| ||||||||||||||| ||||||||||||| |||||||    
T  36561934 ttttagtcttttaacttaatttcaggtaacagtttgatcctttattt 36561980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 49002545 - 49002495
Alignment:
Q  229 ttatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||||||| || |||||||||||||||| |||||||||| || |||||    
T  49002545 ttatacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 49002495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 392
Target Start/End: Complemental strand, 11439988 - 11439951
Alignment:
Q  355 ttttattttcttatgacctttccatcttcaaatctatg 392  Q
    |||||||||||||||  |||||||||||||||||||||    
T  11439988 ttttattttcttatggtctttccatcttcaaatctatg 11439951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 402
Target Start/End: Complemental strand, 2397975 - 2397927
Alignment:
Q  354 gttttattttcttatgacctttccatcttcaaatctatggctttcatct 402  Q
    |||||||||||||||||| |||| |||||||||| |||||  |||||||    
T  2397975 gttttattttcttatgacatttcaatcttcaaatttatggtcttcatct 2397927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 11220997 - 11221049
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || ||||||||||||| || ||||||||||||| |||||    
T  11220997 aattacacttttagtcccttaacttaattttaggtaacagtttgatcctttat 11221049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 11221301 - 11221249
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| ||||| |||| || |||||    
T  11221301 aattacacttttaatcccttaacttaatttcaggtaacaatttggtcctttat 11221249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 11439814 - 11439858
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| || |||||||||||||||| |||||||||| ||||||||    
T  11439814 ttttagtcccttaacttaatttcagataacagtttggtcttttat 11439858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 11576009 - 11575941
Alignment:
Q  213 aaatattaaggttcaattatacttttaatctcttaacttaatttcagctaacagtttgatcttttattt 281  Q
    ||||||| ||||  ||||||| ||||| ||||||||||||||||  | ||| |||||||| ||||||||    
T  11576009 aaatatttaggtagaattatatttttagtctcttaacttaattttcgataatagtttgattttttattt 11575941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 12123507 - 12123551
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||||||||||||||||||||  ||||||||| ||| |||||    
T  12123507 ttttaatctcttaacttaatttcatataacagtttaatcctttat 12123551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 14463432 - 14463380
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  14463432 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 14463380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 18169063 - 18169011
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  18169063 aattacacttttagtcccttaacttaatttcagataacagtttggtcatttat 18169011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 20209155 - 20209207
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  20209155 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 20209207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 21016926 - 21016978
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    |||||||||||||||| ||||| |||||||||| |||||| ||| || |||||    
T  21016926 aattatacttttaatcccttaatttaatttcaggtaacagattggtcatttat 21016978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 25061587 - 25061535
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||  ||||||||||||||||||| |||||||||| || |||||    
T  25061587 aattacacttttggtctcttaacttaatttcaggtaacagtttggtcctttat 25061535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 27812880 - 27812828
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  27812880 aattacacttttagtcccttaacttaatttcagataacagtttggtcctttat 27812828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Original strand, 28843742 - 28843786
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| || ||||| |||||||||| |||||||||||||||||||    
T  28843742 ttttagtcccttaatttaatttcagataacagtttgatcttttat 28843786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 31574256 - 31574308
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||| |||||||| ||||||||||||| || |||||||||| || |||||    
T  31574256 aattatatttttaatcccttaacttaattttaggtaacagtttggtcctttat 31574308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 35415543 - 35415499
Alignment:
Q  235 ttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| || |||||||||||||||| |||||||||| ||||||||    
T  35415543 ttttagtcccttaacttaatttcaggtaacagtttggtcttttat 35415499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 45214381 - 45214433
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  45214381 aattacacttttagtcccttaacttaatttcagttaacagtttggtcctttat 45214433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 46292891 - 46292839
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||||||||| |||||||| |||||||||| ||| |||||| || |||||    
T  46292891 aattatacttttagtctcttaatttaatttcaggtaatagtttggtcctttat 46292839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 50711304 - 50711252
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| || |||||||||||||||| |||||||||| || |||||    
T  50711304 aattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttat 50711252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 10228 - 10176
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    |||||||||||||||| |||||||||||||||| ||||| |||| || |||||    
T  10228 aattatacttttaatcccttaacttaatttcagataacaatttggtcctttat 10176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Original strand, 107857 - 107909
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| |||||||||| |||||||||||||||| |||||||||| || |||||    
T  107857 aattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttat 107909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 233 - 279
Target Start/End: Original strand, 44881 - 44927
Alignment:
Q  233 acttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    |||||||||| |||||||||||||||| |||||||||| || |||||    
T  44881 acttttaatcccttaacttaatttcagataacagtttggtcctttat 44927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 323427 - 323469
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagttt 269  Q
    ||||| ||||||| ||||||||||||||||||| |||||||||    
T  323427 aattacacttttagtctcttaacttaatttcaggtaacagttt 323469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 323721 - 323669
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||||| ||||| || |||||||||||||||| |||||||||| || |||||    
T  323721 aattatatttttagtcccttaacttaatttcaggtaacagtttggtcctttat 323669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 8697 - 8645
Alignment:
Q  227 aattatacttttaatctcttaacttaatttcagctaacagtttgatcttttat 279  Q
    ||||| ||||||| ||| ||||||||||||||| |||||||||| || |||||    
T  8697 aattacacttttagtcttttaacttaatttcaggtaacagtttggtcctttat 8645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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