View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17306_low_4 (Length: 323)
Name: NF17306_low_4
Description: NF17306
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17306_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 6 - 317
Target Start/End: Original strand, 22155004 - 22155315
Alignment:
| Q |
6 |
agcagcagagataatcagaagcgacgagagggtcttgatgaagaagtagtccaggatccacgatcaacacgtctggctagcatcagacaacaccctgatg |
105 |
Q |
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| T |
22155004 |
agcagcagagataatcagaagcgacgagagggtcttgatgaagaagtagtccaggatccacgatcaacacgtctggctagcatcagacaacaccctgatg |
22155103 |
T |
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| Q |
106 |
aaaatgagcagggattctatagaaaagagcatgatggaaagcaagatcccgaaagaaatcacatggtacttagaggtagagatggatcatacccttacaa |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
22155104 |
aaaatgagcagggattctatagaaaagagcatgatggaaagcaagatcccgaaagaaatcacatggtacttagaggtagagagggatcatacccttacaa |
22155203 |
T |
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| Q |
206 |
ggaccggcatcgtagcttggcccatcaattgcatacaaatactgacggatttgataggcaaaaagatagggacagttctgacatggattgggcaaggaga |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22155204 |
ggaccggcatcgtagcttggcccatcaattgcatacaaatactgacggatttgataggcaaaaagatagggacagttctgacatggattgggcaaggaga |
22155303 |
T |
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| Q |
306 |
gatgatgatgtc |
317 |
Q |
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|||||||||||| |
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| T |
22155304 |
gatgatgatgtc |
22155315 |
T |
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