View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17309_high_27 (Length: 252)
Name: NF17309_high_27
Description: NF17309
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17309_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 3 - 234
Target Start/End: Original strand, 7728188 - 7728419
Alignment:
| Q |
3 |
taatacaaggcaaaacagtctaaattgttagaatttgaatgtatataccaatggaggctaacttatcggcacaaaggttgctctctctataaatgtgtga |
102 |
Q |
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| T |
7728188 |
taatacaaggcaaaagagtctaaattgttagaatttgaatgtatttaccaatggaggctaacttatgggcacaaaggttgccctctctataaatgtgtga |
7728287 |
T |
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| Q |
103 |
gactataaaattcatgccatggagcataagtttacaattaattaccatgagcttaagtgtactttgggtct-ctaagtgtaaaatgttacgattttgata |
201 |
Q |
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|||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| || |
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| T |
7728288 |
gactataaaattcatgccattgagcataaatttacaattaattaccatga-cttaagtgtactttgggtctcctaagtttaaaatgttacgattttggta |
7728386 |
T |
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| Q |
202 |
tcttaataaaaagaacgacaaatttagtcccct |
234 |
Q |
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| T |
7728387 |
tattaataaaaagaacgacaaatttaatcccct |
7728419 |
T |
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