View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1731-Insertion-9 (Length: 142)
Name: NF1731-Insertion-9
Description: NF1731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1731-Insertion-9 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 126; Significance: 2e-65; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 126; E-Value: 2e-65
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 10215781 - 10215914
Alignment:
| Q |
9 |
atattttataatatatcatcagataaatttcacataggtttcgtcaattacaggacaaaaatctagcaaataatgttagattcaaaatcaaagatttctc |
108 |
Q |
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| T |
10215781 |
atattttataatatatcatcagataaatttcacataggtttcgtcaattaaaggactaaaatctagcaaataatgttagattcaaaatcaaagatttctc |
10215880 |
T |
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| Q |
109 |
aatatttagaaaaggaaacttgcttttgtttttt |
142 |
Q |
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| T |
10215881 |
aatatttagaaaaggaaacttgcttttgtttttt |
10215914 |
T |
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