View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17315_high_18 (Length: 318)
Name: NF17315_high_18
Description: NF17315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17315_high_18 |
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Alignment Details
Target: chr4 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 15 - 297
Target Start/End: Original strand, 51912752 - 51913035
Alignment:
| Q |
15 |
gagcacagagcacaggcaggacacacgggaaatgactcttcattcggtacaccaattagtggtcattcaagctcaataacgtttggaataagacatttgg |
114 |
Q |
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| T |
51912752 |
gagcacagagcacaggcaggacacacgggaaatgactcttcattcggtacaccaattagtggtcattcaagctcaataacgtttggaataagacatttgg |
51912851 |
T |
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| Q |
115 |
aaataaccggtaattagtaataattgagaaggaagtattgttaactttgatgatgtactgcggtagaagttgctactatacagtagtttcttcttttgct |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51912852 |
aaataaccggtaattagtaataattgagaaggaagtattgttaactttgatgatgtactgcggtagaagttgctactatacagtagtttcttcttttgct |
51912951 |
T |
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| Q |
215 |
ttttcccc-tggtttactgcacgcgtgtacgaaacagaaggaaaagaaagaaataattcacacatgggtgtgctcaatattgga |
297 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51912952 |
ttttccccttggtttactgcacgcgtgtacgaaacagaaggaaaagaaagaaataattcacacatgggtgtgctcaatattgga |
51913035 |
T |
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