View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17316_low_10 (Length: 352)
Name: NF17316_low_10
Description: NF17316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17316_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 10 - 325
Target Start/End: Complemental strand, 23985260 - 23984944
Alignment:
| Q |
10 |
aagaaaatatagtgatcatccttgcgttaggtcggagaaattggaactcattcactctgactcttgatggtgagttttagtttctccaacccacccccgc |
109 |
Q |
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| T |
23985260 |
aagaaaatatagtgatcatccttgcgttaggtcagagaaattggaactcattcactctgactcttgatggtgagttctagtttctccaacccttccccgc |
23985161 |
T |
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| Q |
110 |
aaaagataaagagaaaactatataatagtaattgtgtaaaataa-ctttacttttaaccttcaataatgtttttagatgaatcgaggattaaaccctgac |
208 |
Q |
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| T |
23985160 |
aaaagataaagagaaaattatataatagtaattgtgtaaaataatatttacttttgaccttcaataatttttttagatgaatcgaggattaaaccctgac |
23985061 |
T |
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| Q |
209 |
catatacgacgtgccactttgcaatagtaaaaaactaaatttttacattatatgagatagaatgttattttaaatctcactttcttatagaccgaccttg |
308 |
Q |
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|| |||||||||||||||| ||| ||||||||||||| |||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
23985060 |
cacgtacgacgtgccactttccaacagtaaaaaactaacttttcacatgatatgagatagaatattattttaaatctcactttcttatagaccgaccttg |
23984961 |
T |
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| Q |
309 |
caaaaatttatgtcatg |
325 |
Q |
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||||| |||||| |||| |
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| T |
23984960 |
caaaactttatggcatg |
23984944 |
T |
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