View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17316_low_14 (Length: 278)

Name: NF17316_low_14
Description: NF17316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17316_low_14
NF17316_low_14
[»] chr5 (4 HSPs)
chr5 (3-252)||(29199210-29199459)
chr5 (7-48)||(24040349-24040390)
chr5 (4-48)||(2183090-2183134)
chr5 (4-48)||(9989470-9989514)
[»] chr4 (17 HSPs)
chr4 (94-252)||(12652446-12652603)
chr4 (4-48)||(52557346-52557390)
chr4 (4-48)||(44957536-44957580)
chr4 (4-48)||(50768968-50769012)
chr4 (4-42)||(23756059-23756097)
chr4 (4-49)||(37206686-37206731)
chr4 (4-49)||(43734545-43734590)
chr4 (4-48)||(623938-623982)
chr4 (4-48)||(1433530-1433574)
chr4 (4-48)||(19088600-19088644)
chr4 (4-48)||(21763440-21763484)
chr4 (4-48)||(30683787-30683831)
chr4 (4-48)||(33091712-33091756)
chr4 (4-48)||(38339639-38339683)
chr4 (4-48)||(42855598-42855642)
chr4 (4-48)||(44991537-44991581)
chr4 (4-48)||(46849928-46849972)
[»] chr1 (12 HSPs)
chr1 (3-48)||(4330095-4330140)
chr1 (4-49)||(25995930-25995975)
chr1 (4-48)||(9006450-9006494)
chr1 (1-48)||(27400680-27400727)
chr1 (4-48)||(1762933-1762977)
chr1 (4-48)||(2064470-2064514)
chr1 (4-48)||(3089489-3089533)
chr1 (4-48)||(12127312-12127356)
chr1 (4-48)||(37284987-37285031)
chr1 (4-48)||(38127856-38127900)
chr1 (4-48)||(45052948-45052992)
chr1 (4-48)||(49140402-49140446)
[»] chr7 (13 HSPs)
chr7 (4-48)||(21391449-21391493)
chr7 (4-48)||(33716735-33716779)
chr7 (4-48)||(41751797-41751841)
chr7 (4-49)||(36423515-36423560)
chr7 (4-49)||(48626322-48626367)
chr7 (4-48)||(6356912-6356956)
chr7 (4-48)||(10526458-10526502)
chr7 (4-48)||(17359328-17359372)
chr7 (4-48)||(19681754-19681798)
chr7 (4-48)||(28286376-28286420)
chr7 (4-48)||(28297966-28298010)
chr7 (4-40)||(31638202-31638238)
chr7 (4-48)||(41191944-41191988)
[»] chr6 (11 HSPs)
chr6 (4-48)||(32993274-32993318)
chr6 (1-48)||(35167748-35167795)
chr6 (4-48)||(5310973-5311017)
chr6 (4-48)||(5938072-5938116)
chr6 (4-48)||(6137637-6137681)
chr6 (4-48)||(7270100-7270144)
chr6 (4-48)||(7270776-7270820)
chr6 (4-48)||(18053103-18053147)
chr6 (4-48)||(24744475-24744519)
chr6 (4-48)||(26600504-26600548)
chr6 (4-48)||(34890791-34890835)
[»] chr3 (15 HSPs)
chr3 (4-48)||(51509378-51509422)
chr3 (4-49)||(24428713-24428758)
chr3 (4-48)||(8474105-8474149)
chr3 (4-48)||(10506207-10506251)
chr3 (4-48)||(16931753-16931797)
chr3 (4-48)||(22151992-22152036)
chr3 (4-48)||(26318441-26318485)
chr3 (4-48)||(29818324-29818368)
chr3 (4-48)||(32633324-32633368)
chr3 (4-48)||(39241505-39241549)
chr3 (4-48)||(42591931-42591975)
chr3 (4-48)||(44893887-44893931)
chr3 (4-48)||(47669406-47669450)
chr3 (4-48)||(54108161-54108205)
chr3 (4-48)||(54752310-54752354)
[»] chr2 (9 HSPs)
chr2 (4-49)||(24372226-24372271)
chr2 (4-48)||(8174144-8174188)
chr2 (4-48)||(16305172-16305216)
chr2 (4-48)||(17052205-17052249)
chr2 (4-48)||(24138765-24138809)
chr2 (4-48)||(26181959-26182003)
chr2 (4-48)||(34735602-34735646)
chr2 (4-48)||(38332851-38332895)
chr2 (4-48)||(41474229-41474273)
[»] scaffold0221 (1 HSPs)
scaffold0221 (4-48)||(8575-8619)
[»] scaffold0182 (1 HSPs)
scaffold0182 (4-48)||(19855-19899)
[»] scaffold0115 (1 HSPs)
scaffold0115 (4-48)||(21658-21702)
[»] scaffold0072 (1 HSPs)
scaffold0072 (4-48)||(15595-15639)
[»] scaffold0019 (1 HSPs)
scaffold0019 (4-48)||(50735-50779)
[»] chr8 (6 HSPs)
chr8 (4-48)||(5435159-5435203)
chr8 (4-48)||(7949559-7949603)
chr8 (4-44)||(11708009-11708049)
chr8 (4-48)||(38588734-38588778)
chr8 (4-48)||(44594860-44594904)
chr8 (4-48)||(45077462-45077506)


Alignment Details
Target: chr5 (Bit Score: 246; Significance: 1e-136; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 3 - 252
Target Start/End: Original strand, 29199210 - 29199459
Alignment:
Q  3 taaaatgatactaataaataatgttagaagatccacataatacaaataattctaacgtgaaacgactgttatttagagacggtgggactattttgatata 102  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29199210 taaaatgatactaataaataatgttagaagatccacataatataaataattctaacgtgaaacgactgttatttagagacggtgggactattttgatata 29199309  T
Q  103 attttgtgacgaaagaaagttgatgtatttcattccataattaaatagaggaataaacacaatacacaatgcacttgtttcgcgggaaggacgattaaca 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29199310 attttgtgacgaaagaaagttgatgtatttcattccataattaaatagaggaataaacacaatacacaatgcacttgtttcgcgggaaggacgattaaca 29199409  T
Q  203 aactatcttctccttccatccttccataactgaaaatcaaatcccgcttt 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29199410 aactatcttctccttccatccttccataactgaaaatcaaatcccgcttt 29199459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 24040349 - 24040390
Alignment:
Q  7 atgatactaataaataatgttagaagatccacataatacaaa 48  Q
    ||||||||||||||||| ||||||||| |||||||| |||||    
T  24040349 atgatactaataaataaagttagaagacccacataacacaaa 24040390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 2183134 - 2183090
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  2183134 aaaatgatactaataaataaagttagaggacccacataacacaaa 2183090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 9989514 - 9989470
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  9989514 aaaatgatactaataaataaagttagaggacccacataacacaaa 9989470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 94 - 252
Target Start/End: Complemental strand, 12652603 - 12652446
Alignment:
Q  94 tttgatataattttgtgacgaaagaaagttgatgtatttcattccataattaaatagaggaataaacacaatacacaatgcacttgtttcgcgggaagga 193  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12652603 tttgatataattt-gtgacaaaagaaagttgatgtatttcattccataattaaatagaggaataaacacaatacacaatgcacttgtttcgcgggaagga 12652505  T
Q  194 cgattaacaaactatcttctccttccatccttccataactgaaaatcaaatcccgcttt 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12652504 cgattaacaaactatcttctccttccatccttccataactgaaaatcaaatcccgcttt 12652446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 52557346 - 52557390
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| |||||||||||||||||    
T  52557346 aaaatgatactaataaataaagttagaggatccacataatacaaa 52557390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 44957580 - 44957536
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||    
T  44957580 aaaatgatactaataaataaagttagaggatccacataacacaaa 44957536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 50769012 - 50768968
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||    
T  50769012 aaaatgatactaataaataaagttagaggatccacataacacaaa 50768968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 23756059 - 23756097
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataa 42  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  23756059 aaaatgatactaataaataaagttagaggatccacataa 23756097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 37206686 - 37206731
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaat 49  Q
    |||||||||||||||||||| |||||| || |||||||| ||||||    
T  37206686 aaaatgatactaataaataaagttagaggacccacataacacaaat 37206731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 43734545 - 43734590
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaat 49  Q
    |||||||||||||||||||| |||||| || |||||||| ||||||    
T  43734545 aaaatgatactaataaataaagttagaggacccacataacacaaat 43734590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 623938 - 623982
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||| ||||||||||| |||||| ||||||||||| |||||    
T  623938 aaaatgatgctaataaataaagttagaggatccacataacacaaa 623982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 1433530 - 1433574
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  1433530 aaaatgatactaataaataaagttagaggacccacataacacaaa 1433574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 19088600 - 19088644
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  19088600 aaaatgatactaataaataaagttagaggacccacataacacaaa 19088644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 21763440 - 21763484
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  21763440 aaaatgatactaataaataaagttagaggacccacataacacaaa 21763484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 30683787 - 30683831
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  30683787 aaaatgatactaataaataaagttagaggacccacataacacaaa 30683831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 33091712 - 33091756
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  33091712 aaaatgatactaataaataaagttagaggacccacataacacaaa 33091756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 38339683 - 38339639
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  38339683 aaaatgatactaataaataaagttagaggacccacataacacaaa 38339639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 42855598 - 42855642
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  42855598 aaaatgatactaataaataaagttagaggacccacataacacaaa 42855642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 44991537 - 44991581
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  44991537 aaaatgatactaataaataaagttagaggacccacataacacaaa 44991581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 46849928 - 46849972
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  46849928 aaaatgatactaataaataaagttagaggacccacataacacaaa 46849972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 4330095 - 4330140
Alignment:
Q  3 taaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    ||||||||||||||||||||| ||||||||| |||||||| |||||    
T  4330095 taaaatgatactaataaataaagttagaagacccacataacacaaa 4330140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 25995975 - 25995930
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaat 49  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||||    
T  25995975 aaaatgatactaataaataaagttagaggatccacataacacaaat 25995930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 9006450 - 9006494
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || ||||||||||||||    
T  9006450 aaaatgatactaataaataaagttagaggacccacataatacaaa 9006494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27400680 - 27400727
Alignment:
Q  1 actaaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    ||||||||||||||||||||||| |||||| || |||||||| |||||    
T  27400680 actaaaatgatactaataaataaagttagaggacccacataacacaaa 27400727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 1762933 - 1762977
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  1762933 aaaatgatactaataaataaagttagaggacccacataacacaaa 1762977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 2064470 - 2064514
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  2064470 aaaatgatactaataaataaagttagaggacccacataacacaaa 2064514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 3089533 - 3089489
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||| | ||||||||||| |||||    
T  3089533 aaaatgatactaataaataaagttataggatccacataacacaaa 3089489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 12127312 - 12127356
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  12127312 aaaatgatactaataaataaagttagaggacccacataacacaaa 12127356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 37284987 - 37285031
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  37284987 aaaatgatactaataaataaagttagaggacccacataacacaaa 37285031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 38127900 - 38127856
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  38127900 aaaatgatactaataaataaagttagaggacccacataaaacaaa 38127856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 45052948 - 45052992
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  45052948 aaaatgatactaataaataaagttagaggacccacataacacaaa 45052992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 49140402 - 49140446
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  49140402 aaaatgatactaataaataaagttagaggacccacataacacaaa 49140446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 21391449 - 21391493
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||    
T  21391449 aaaatgatactaataaataaagttagatgatccacataacacaaa 21391493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 33716779 - 33716735
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || ||||||||||||||    
T  33716779 aaaatgatactaataaataaagttagaggacccacataatacaaa 33716735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 41751841 - 41751797
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    ||||| |||||||||||||| |||||||||||||||||| |||||    
T  41751841 aaaataatactaataaataaagttagaagatccacataacacaaa 41751797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 36423560 - 36423515
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaat 49  Q
    |||||||||||||||||||| |||||| || |||||||| ||||||    
T  36423560 aaaatgatactaataaataaagttagaggacccacataacacaaat 36423515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 48626322 - 48626367
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaat 49  Q
    |||||||||||||||||||| |||||| || |||||||| ||||||    
T  48626322 aaaatgatactaataaataaagttagaggacccacataacacaaat 48626367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 6356956 - 6356912
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  6356956 aaaatgatactaataaataaagttagaggacccacataacacaaa 6356912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 10526502 - 10526458
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  10526502 aaaatgatactaataaataaagttagaggacccacataacacaaa 10526458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 17359372 - 17359328
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  17359372 aaaatgatactaataaataaagttagaggacccacataacacaaa 17359328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 19681754 - 19681798
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  19681754 aaaatgatactaataaataaagttagaggacccacataacacaaa 19681798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 28286376 - 28286420
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  28286376 aaaatgatactaataaataaagttagaggacccacataacacaaa 28286420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 28298010 - 28297966
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  28298010 aaaatgatactaataaataaagttagaggacccacataacacaaa 28297966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Original strand, 31638202 - 31638238
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacat 40  Q
    |||||||||||||||||||| |||||| |||||||||    
T  31638202 aaaatgatactaataaataaagttagaggatccacat 31638238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 41191944 - 41191988
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  41191944 aaaatgatactaataaataaagttagaggacccacataacacaaa 41191988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 32993274 - 32993318
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || ||||||||||||||    
T  32993274 aaaatgatactaataaataaagttagaggacccacataatacaaa 32993318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 35167748 - 35167795
Alignment:
Q  1 actaaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    ||||||||||||||||||||||| |||||| || |||||||| |||||    
T  35167748 actaaaatgatactaataaataaagttagaggacccacataacacaaa 35167795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 5311017 - 5310973
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  5311017 aaaatgatactaataaataaagttagaggacccacataacacaaa 5310973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 5938072 - 5938116
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  5938072 aaaatgatactaataaataaagttagaggacccacataacacaaa 5938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 6137637 - 6137681
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  6137637 aaaatgatactaataaataaagttagaggacccacataacacaaa 6137681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 7270144 - 7270100
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  7270144 aaaatgatactaataaataaagttagaggacccacataacacaaa 7270100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 7270820 - 7270776
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  7270820 aaaatgatactaataaataaagttagaggacccacataacacaaa 7270776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 18053147 - 18053103
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  18053147 aaaatgatactaataaataaagttagaggacccacataacacaaa 18053103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 24744519 - 24744475
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  24744519 aaaatgatactaataaataaagttagaggacccacataacacaaa 24744475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 26600548 - 26600504
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  26600548 aaaatgatactaataaataaagttagaggacccacataacacaaa 26600504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 34890835 - 34890791
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  34890835 aaaatgatactaataaataaagttagaggacccacataacacaaa 34890791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 51509378 - 51509422
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || ||||||||||||||    
T  51509378 aaaatgatactaataaataaagttagaggacccacataatacaaa 51509422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 24428758 - 24428713
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaat 49  Q
    |||||||||||||||||| | |||||| ||||||||||| ||||||    
T  24428758 aaaatgatactaataaattaagttagaggatccacataacacaaat 24428713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 8474105 - 8474149
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  8474105 aaaatgatactaataaataaagttagaggacccacataacacaaa 8474149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 10506207 - 10506251
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  10506207 aaaatgatactaataaataaagttagaggacccacataacacaaa 10506251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 16931797 - 16931753
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  16931797 aaaatgatactaataaataaagttagaggacccacataacacaaa 16931753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 22152036 - 22151992
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  22152036 aaaatgatactaataaataaagttagaggacccacataacacaaa 22151992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 26318441 - 26318485
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  26318441 aaaatgatactaataaataaagttagaggacccacataacacaaa 26318485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 29818368 - 29818324
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| |||||| |||| |||||    
T  29818368 aaaatgatactaataaataaagttagaggatccatataacacaaa 29818324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 32633324 - 32633368
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  32633324 aaaatgatactaataaataaagttagaggacccacataacacaaa 32633368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 39241549 - 39241505
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  39241549 aaaatgatactaataaataaagttagaggacccacataacacaaa 39241505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 42591975 - 42591931
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  42591975 aaaatgatactaataaataaagttagaggacccacataacacaaa 42591931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 44893931 - 44893887
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  44893931 aaaatgatactaataaataaagttagaggacccacataacacaaa 44893887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 47669450 - 47669406
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  47669450 aaaatgatactaataaataaagttagaggacccacataacacaaa 47669406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 54108161 - 54108205
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  54108161 aaaatgatactaataaataaagttagaggacccacataacacaaa 54108205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 54752354 - 54752310
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  54752354 aaaatgatactaataaataaagttagaggacccacataacacaaa 54752310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 30; Significance: 0.00000009; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 24372226 - 24372271
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaat 49  Q
    |||||||||||||||||||| |||||| || |||||||| ||||||    
T  24372226 aaaatgatactaataaataaagttagaggacccacataacacaaat 24372271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 8174144 - 8174188
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  8174144 aaaatgatactaataaataaagttagaggacccacataacacaaa 8174188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 16305216 - 16305172
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  16305216 aaaatgatactaataaataaagttagaggacccacataacacaaa 16305172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 17052249 - 17052205
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  17052249 aaaatgatactaataaataaagttagaggacccacataacacaaa 17052205  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 24138765 - 24138809
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  24138765 aaaatgatactaataaataaagttagaggacccacataacacaaa 24138809  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 26181959 - 26182003
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  26181959 aaaatgatactaataaataaagttagaggacccacataacacaaa 26182003  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 34735602 - 34735646
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  34735602 aaaatgatactaataaataaagttagaggacccacataacacaaa 34735646  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 38332895 - 38332851
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  38332895 aaaatgatactaataaataaagttagaggacccacataaaacaaa 38332851  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 41474273 - 41474229
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  41474273 aaaatgatactaataaataaagttagatgacccacataacacaaa 41474229  T

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Target: scaffold0221 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 8619 - 8575
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  8619 aaaatgatactaataaataaagttagaggacccacataacacaaa 8575  T

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Target: scaffold0182 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 19899 - 19855
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||| ||||||||||| |||||| || ||||||||||||||    
T  19899 aaaatgatgctaataaataaagttagaggacccacataatacaaa 19855  T

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Target: scaffold0115 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 21702 - 21658
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  21702 aaaatgatactaataaataaagttagaggacccacataacacaaa 21658  T

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Target: scaffold0072 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 15639 - 15595
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  15639 aaaatgatactaataaataaagttagaggacccacataacacaaa 15595  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 50735 - 50779
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  50735 aaaatgatactaataaataaagttagaggacccacataacacaaa 50779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 29; Significance: 0.0000004; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 5435159 - 5435203
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  5435159 aaaatgatactaataaataaagttagatgacccacataacacaaa 5435203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 7949603 - 7949559
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  7949603 aaaatgatactaataaataaagttagaggacccacataacacaaa 7949559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 11708009 - 11708049
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataata 44  Q
    |||||||||||||||||||| |||||| || ||||||||||    
T  11708009 aaaatgatactaataaataaagttagatgacccacataata 11708049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 38588778 - 38588734
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  38588778 aaaatgatactaataaataaagttagaggacccacataacacaaa 38588734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 44594860 - 44594904
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    ||||| |||||||||||||| |||||| ||||||||||| |||||    
T  44594860 aaaataatactaataaataaagttagaggatccacataacacaaa 44594904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 45077462 - 45077506
Alignment:
Q  4 aaaatgatactaataaataatgttagaagatccacataatacaaa 48  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  45077462 aaaatgatactaataaataaagttagaggacccacataacacaaa 45077506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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