View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17317_high_12 (Length: 260)
Name: NF17317_high_12
Description: NF17317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17317_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 42893911 - 42894142
Alignment:
| Q |
17 |
aaacagaggaagaagatgagtagaagaaacggaagtgggccaaagctagatttgaagctgaatttgtcaccaccaagggtgaacagaagaatggaatcat |
116 |
Q |
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| T |
42893911 |
aaacagaggaagaagatgagtagaagaaacggaagtgggccaaagctagatttgaagctgaatttgtcaccaccaagggtgaacagaagaatggaatcat |
42894010 |
T |
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| Q |
117 |
caccaacacgatcagcgtcggtgtcgccgccgagttcatgtgtttcatctgagaatggatcaagcagccctgaagcaacctccatgctgttagtaggttg |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42894011 |
caccaacacgatcagcgtcggtgtcgccgccgagttcatgtgtttcatctgagaatggatcaagcagccctgaagcaacctccatgctgttagtaggttg |
42894110 |
T |
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| Q |
217 |
tcctcgttgtctcatgtatgtgatgctctctg |
248 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
42894111 |
tcctcgttgtctcatgtatgtgatgctctctg |
42894142 |
T |
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