View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17317_low_4 (Length: 375)

Name: NF17317_low_4
Description: NF17317
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17317_low_4
NF17317_low_4
[»] chr8 (35 HSPs)
chr8 (1-167)||(6525078-6525244)
chr8 (245-321)||(6524922-6524998)
chr8 (319-362)||(29563656-29563699)
chr8 (319-362)||(45145867-45145910)
chr8 (320-362)||(2229069-2229111)
chr8 (320-362)||(2339289-2339331)
chr8 (320-362)||(41915701-41915743)
chr8 (320-362)||(45145972-45146014)
chr8 (318-362)||(2229177-2229221)
chr8 (245-321)||(17934453-17934529)
chr8 (323-362)||(12270163-12270202)
chr8 (319-362)||(30923919-30923962)
chr8 (320-362)||(2339397-2339439)
chr8 (320-362)||(25848074-25848116)
chr8 (320-362)||(27793304-27793346)
chr8 (320-362)||(33642457-33642499)
chr8 (320-362)||(33837579-33837621)
chr8 (320-362)||(40465237-40465279)
chr8 (320-362)||(43135151-43135193)
chr8 (320-361)||(11293295-11293336)
chr8 (321-362)||(32159141-32159182)
chr8 (245-321)||(21511462-21511538)
chr8 (245-321)||(41636589-41636665)
chr8 (246-321)||(32821801-32821876)
chr8 (319-362)||(34028381-34028424)
chr8 (324-362)||(22781885-22781923)
chr8 (320-362)||(29563765-29563807)
chr8 (320-362)||(32159033-32159075)
chr8 (320-362)||(34028490-34028532)
chr8 (327-361)||(37564739-37564773)
chr8 (320-362)||(41915593-41915635)
chr8 (320-361)||(25878171-25878212)
chr8 (320-360)||(3799826-3799866)
chr8 (326-362)||(25847972-25848008)
chr8 (320-360)||(34157770-34157810)
[»] scaffold0024 (3 HSPs)
scaffold0024 (316-362)||(36061-36107)
scaffold0024 (245-321)||(42031-42107)
scaffold0024 (320-362)||(35953-35995)
[»] chr3 (53 HSPs)
chr3 (320-362)||(10049775-10049817)
chr3 (320-362)||(6086900-6086942)
chr3 (320-362)||(9465178-9465220)
chr3 (320-362)||(14768097-14768139)
chr3 (320-362)||(26999128-26999170)
chr3 (320-362)||(28406466-28406508)
chr3 (320-362)||(28406574-28406616)
chr3 (320-362)||(28945655-28945697)
chr3 (320-362)||(28945763-28945805)
chr3 (320-362)||(39341371-39341413)
chr3 (317-362)||(26999017-26999062)
chr3 (317-362)||(47449912-47449957)
chr3 (321-361)||(28564935-28564975)
chr3 (245-321)||(35924716-35924792)
chr3 (245-321)||(36734911-36734987)
chr3 (322-362)||(49122945-49122985)
chr3 (323-362)||(9440130-9440169)
chr3 (270-321)||(21891876-21891927)
chr3 (319-362)||(40214898-40214941)
chr3 (320-362)||(379069-379111)
chr3 (316-362)||(6087008-6087054)
chr3 (320-362)||(8243789-8243831)
chr3 (320-362)||(9440235-9440277)
chr3 (320-362)||(10049667-10049709)
chr3 (322-360)||(25113458-25113496)
chr3 (316-362)||(26123097-26123143)
chr3 (320-362)||(29019734-29019776)
chr3 (320-362)||(42605934-42605976)
chr3 (320-362)||(51698113-51698155)
chr3 (322-362)||(19202251-19202291)
chr3 (327-362)||(8243688-8243723)
chr3 (320-362)||(1122382-1122424)
chr3 (320-362)||(3484331-3484373)
chr3 (320-362)||(18765365-18765407)
chr3 (320-362)||(19202357-19202399)
chr3 (320-362)||(21653343-21653385)
chr3 (327-361)||(25846619-25846653)
chr3 (320-362)||(28565042-28565084)
chr3 (320-362)||(29019842-29019884)
chr3 (320-362)||(40215007-40215049)
chr3 (255-321)||(47257395-47257461)
chr3 (320-362)||(51698221-51698263)
chr3 (248-321)||(45406319-45406392)
chr3 (317-362)||(48643711-48643756)
chr3 (322-362)||(2544566-2544606)
chr3 (320-360)||(8266340-8266380)
chr3 (245-321)||(19680867-19680943)
chr3 (285-321)||(29251219-29251255)
chr3 (320-360)||(31376284-31376324)
chr3 (320-360)||(39617020-39617060)
chr3 (325-361)||(42841877-42841913)
chr3 (245-301)||(46552599-46552655)
chr3 (320-360)||(51517066-51517106)
[»] chr7 (31 HSPs)
chr7 (245-321)||(9157580-9157656)
chr7 (320-362)||(35427766-35427808)
chr7 (245-321)||(28337006-28337082)
chr7 (320-359)||(5347832-5347871)
chr7 (246-321)||(48268863-48268938)
chr7 (320-362)||(5909578-5909620)
chr7 (320-362)||(12763228-12763270)
chr7 (320-362)||(12763336-12763378)
chr7 (320-362)||(20397922-20397964)
chr7 (320-362)||(23248775-23248817)
chr7 (255-321)||(24875670-24875736)
chr7 (319-361)||(34281667-34281709)
chr7 (320-361)||(7463448-7463489)
chr7 (245-321)||(24862046-24862122)
chr7 (245-321)||(28606552-28606628)
chr7 (320-362)||(5347722-5347764)
chr7 (320-362)||(5909470-5909512)
chr7 (320-362)||(7107737-7107779)
chr7 (320-362)||(10599423-10599465)
chr7 (320-362)||(12085023-12085065)
chr7 (319-357)||(15074620-15074658)
chr7 (320-362)||(20397814-20397856)
chr7 (320-362)||(23248667-23248709)
chr7 (247-321)||(40952237-40952311)
chr7 (320-362)||(41088851-41088893)
chr7 (245-318)||(28918863-28918936)
chr7 (320-360)||(7463559-7463599)
chr7 (320-360)||(11668014-11668054)
chr7 (250-321)||(25318181-25318250)
chr7 (245-321)||(28606288-28606364)
chr7 (320-360)||(28677316-28677356)
[»] chr2 (44 HSPs)
chr2 (316-360)||(41260020-41260064)
chr2 (320-362)||(6761572-6761614)
chr2 (320-362)||(16241266-16241308)
chr2 (320-362)||(20427000-20427042)
chr2 (320-362)||(29866081-29866123)
chr2 (320-362)||(39377835-39377877)
chr2 (317-362)||(16241374-16241419)
chr2 (245-318)||(33891831-33891904)
chr2 (245-321)||(5998048-5998124)
chr2 (320-359)||(11711434-11711473)
chr2 (311-362)||(45065687-45065738)
chr2 (319-361)||(4740708-4740750)
chr2 (320-362)||(6761464-6761506)
chr2 (320-362)||(7765793-7765835)
chr2 (320-362)||(9152486-9152528)
chr2 (320-362)||(12486099-12486141)
chr2 (320-362)||(13775710-13775752)
chr2 (320-362)||(25892051-25892093)
chr2 (320-362)||(30864667-30864709)
chr2 (320-362)||(32750341-32750383)
chr2 (320-362)||(44737282-44737324)
chr2 (320-362)||(44737389-44737431)
chr2 (320-361)||(18452676-18452717)
chr2 (245-321)||(6201232-6201308)
chr2 (320-360)||(9152378-9152418)
chr2 (245-321)||(32918460-32918536)
chr2 (245-304)||(14660303-14660362)
chr2 (327-362)||(39377938-39377973)
chr2 (319-349)||(13724101-13724131)
chr2 (320-362)||(13775818-13775860)
chr2 (320-362)||(18452568-18452610)
chr2 (319-361)||(23667426-23667468)
chr2 (320-362)||(25795345-25795387)
chr2 (320-362)||(25891943-25891985)
chr2 (320-362)||(29866189-29866231)
chr2 (320-362)||(30864782-30864824)
chr2 (320-362)||(40430773-40430815)
chr2 (320-362)||(42263577-42263619)
chr2 (248-321)||(32493730-32493802)
chr2 (245-321)||(21646899-21646975)
chr2 (249-317)||(28176178-28176246)
chr2 (320-360)||(30761487-30761527)
chr2 (246-318)||(39952318-39952390)
chr2 (245-321)||(41398972-41399048)
[»] chr6 (25 HSPs)
chr6 (319-362)||(390912-390955)
chr6 (320-362)||(885601-885643)
chr6 (320-362)||(6045788-6045830)
chr6 (320-362)||(14931360-14931402)
chr6 (320-362)||(24949630-24949672)
chr6 (320-362)||(24949738-24949780)
chr6 (320-362)||(7405443-7405485)
chr6 (320-362)||(7405551-7405593)
chr6 (320-362)||(8558913-8558955)
chr6 (320-362)||(17225350-17225392)
chr6 (320-362)||(22880917-22880959)
chr6 (320-362)||(22898852-22898894)
chr6 (318-362)||(766534-766578)
chr6 (318-362)||(30686541-30686585)
chr6 (254-321)||(17186928-17186995)
chr6 (320-362)||(6047903-6047945)
chr6 (320-362)||(31971029-31971071)
chr6 (320-362)||(31971137-31971179)
chr6 (320-362)||(33859489-33859531)
chr6 (320-362)||(33859597-33859639)
chr6 (320-362)||(34639039-34639081)
chr6 (245-318)||(13246850-13246923)
chr6 (320-361)||(30686652-30686693)
chr6 (245-321)||(21381594-21381670)
chr6 (320-360)||(27909084-27909124)
[»] scaffold2107 (1 HSPs)
scaffold2107 (320-362)||(550-592)
[»] chr5 (49 HSPs)
chr5 (320-362)||(7053647-7053689)
chr5 (320-362)||(9601700-9601742)
chr5 (320-362)||(25027801-25027843)
chr5 (320-362)||(29374277-29374319)
chr5 (320-362)||(37699779-37699821)
chr5 (317-362)||(31802954-31802999)
chr5 (248-317)||(35286208-35286277)
chr5 (322-362)||(2959240-2959280)
chr5 (322-362)||(2967709-2967749)
chr5 (245-321)||(32270247-32270323)
chr5 (254-321)||(10192780-10192847)
chr5 (320-362)||(903965-904007)
chr5 (320-362)||(1643451-1643493)
chr5 (320-362)||(7749917-7749959)
chr5 (320-362)||(7945836-7945878)
chr5 (320-362)||(13144879-13144921)
chr5 (320-362)||(13144987-13145029)
chr5 (320-362)||(15569438-15569480)
chr5 (320-362)||(25027693-25027735)
chr5 (320-362)||(26898298-26898340)
chr5 (320-362)||(31803065-31803107)
chr5 (320-362)||(41989563-41989605)
chr5 (320-361)||(21610409-21610450)
chr5 (320-361)||(36417046-36417087)
chr5 (245-304)||(865807-865866)
chr5 (327-362)||(1108289-1108324)
chr5 (246-317)||(17218347-17218418)
chr5 (323-362)||(21090378-21090417)
chr5 (327-362)||(37699887-37699922)
chr5 (323-362)||(41046830-41046869)
chr5 (320-362)||(1643343-1643385)
chr5 (320-362)||(2959346-2959388)
chr5 (320-362)||(2967815-2967857)
chr5 (320-362)||(6338422-6338464)
chr5 (320-362)||(9601592-9601634)
chr5 (320-362)||(18353315-18353357)
chr5 (320-362)||(23411272-23411314)
chr5 (320-362)||(29374169-29374211)
chr5 (320-362)||(36419092-36419134)
chr5 (320-362)||(41815292-41815334)
chr5 (320-361)||(7053756-7053796)
chr5 (320-361)||(26898190-26898231)
chr5 (272-321)||(36977603-36977652)
chr5 (320-361)||(38393863-38393904)
chr5 (277-321)||(5841513-5841557)
chr5 (245-321)||(9771660-9771736)
chr5 (312-360)||(13789723-13789771)
chr5 (317-361)||(13932457-13932501)
chr5 (245-321)||(42522312-42522387)
[»] chr4 (43 HSPs)
chr4 (320-362)||(4758776-4758818)
chr4 (320-362)||(23125645-23125687)
chr4 (320-362)||(53621327-53621369)
chr4 (318-362)||(49122518-49122562)
chr4 (320-362)||(580410-580452)
chr4 (320-362)||(2385194-2385236)
chr4 (320-362)||(3085979-3086021)
chr4 (320-362)||(4758884-4758926)
chr4 (320-362)||(5970386-5970428)
chr4 (320-362)||(6246715-6246757)
chr4 (320-362)||(18135420-18135462)
chr4 (320-362)||(19485679-19485721)
chr4 (320-362)||(20688523-20688565)
chr4 (320-362)||(27006504-27006546)
chr4 (320-362)||(36099486-36099528)
chr4 (320-362)||(36099594-36099636)
chr4 (320-362)||(38688018-38688060)
chr4 (320-362)||(44200079-44200121)
chr4 (320-362)||(49122627-49122669)
chr4 (320-362)||(53621435-53621477)
chr4 (320-361)||(15170882-15170923)
chr4 (245-321)||(50680014-50680088)
chr4 (245-321)||(24968563-24968639)
chr4 (245-317)||(35321380-35321452)
chr4 (318-362)||(39877400-39877444)
chr4 (323-362)||(18430362-18430401)
chr4 (320-362)||(580518-580560)
chr4 (320-362)||(2279523-2279565)
chr4 (320-362)||(2385302-2385344)
chr4 (320-362)||(31227270-31227312)
chr4 (320-362)||(31227378-31227420)
chr4 (320-362)||(38687910-38687952)
chr4 (320-362)||(39834273-39834315)
chr4 (320-362)||(51833011-51833053)
chr4 (320-362)||(53225751-53225793)
chr4 (320-362)||(55292111-55292153)
chr4 (320-361)||(19485571-19485612)
chr4 (248-301)||(37874744-37874797)
chr4 (326-362)||(6246613-6246649)
chr4 (326-362)||(29833270-29833306)
chr4 (322-362)||(31854486-31854526)
chr4 (316-360)||(32193470-32193514)
chr4 (320-360)||(44111744-44111784)
[»] chr1 (41 HSPs)
chr1 (320-362)||(2352416-2352458)
chr1 (320-362)||(9548779-9548821)
chr1 (320-362)||(23398187-23398229)
chr1 (320-361)||(38830591-38830632)
chr1 (245-321)||(34331447-34331523)
chr1 (245-321)||(36699909-36699985)
chr1 (245-321)||(36716013-36716089)
chr1 (319-362)||(10380388-10380431)
chr1 (319-362)||(29312437-29312480)
chr1 (246-321)||(51161991-51162066)
chr1 (320-362)||(2352308-2352350)
chr1 (320-362)||(2961103-2961145)
chr1 (320-362)||(2961211-2961253)
chr1 (320-362)||(9301918-9301960)
chr1 (320-362)||(10065254-10065296)
chr1 (320-362)||(10380497-10380539)
chr1 (320-362)||(14281589-14281631)
chr1 (320-362)||(34718890-34718932)
chr1 (320-362)||(38830482-38830524)
chr1 (245-321)||(47792709-47792786)
chr1 (314-362)||(9548665-9548713)
chr1 (245-321)||(25892081-25892157)
chr1 (245-321)||(43413529-43413605)
chr1 (322-362)||(45536270-45536310)
chr1 (323-362)||(2512413-2512452)
chr1 (320-362)||(14281697-14281740)
chr1 (311-362)||(26733775-26733826)
chr1 (320-362)||(7796089-7796131)
chr1 (320-362)||(9302026-9302068)
chr1 (320-362)||(23398079-23398121)
chr1 (320-362)||(26550394-26550436)
chr1 (320-362)||(28989271-28989313)
chr1 (320-362)||(29892237-29892279)
chr1 (320-362)||(45536162-45536204)
chr1 (320-362)||(46320256-46320298)
chr1 (255-311)||(12628548-12628604)
chr1 (245-321)||(15801883-15801959)
chr1 (320-360)||(26924322-26924362)
chr1 (245-321)||(29152985-29153061)
chr1 (318-362)||(40161280-40161323)
chr1 (245-321)||(41812189-41812265)
[»] scaffold0221 (2 HSPs)
scaffold0221 (319-362)||(11137-11180)
scaffold0221 (320-362)||(11029-11071)
[»] scaffold0123 (2 HSPs)
scaffold0123 (320-362)||(29243-29285)
scaffold0123 (325-362)||(29351-29388)
[»] scaffold0144 (2 HSPs)
scaffold0144 (320-361)||(38933-38974)
scaffold0144 (326-362)||(38830-38866)
[»] scaffold0027 (1 HSPs)
scaffold0027 (245-304)||(116868-116927)
[»] scaffold0007 (2 HSPs)
scaffold0007 (317-359)||(77341-77383)
scaffold0007 (320-352)||(77461-77493)
[»] scaffold0006 (1 HSPs)
scaffold0006 (248-321)||(160787-160861)
[»] scaffold0002 (1 HSPs)
scaffold0002 (320-362)||(492412-492454)


Alignment Details
Target: chr8 (Bit Score: 159; Significance: 1e-84; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 6525244 - 6525078
Alignment:
Q  1 aagatgaagaattagagagttttttgaagaatcgaaagcttcgtcggaacggaggaagcggtggtgtcaggtgtggggtttgtggtgccgtgcagggttt 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6525244 aagatgaagaattagagagtttgttgaagaatcgaaagcttcgtcggaacggaggaagcggtggtgtcaggtgtggggtttgtggtgccgtgcagggttt 6525145  T
Q  101 ctgaatggcgcggtgaaagggttttagggtttaagggcttttatatgtatgttttcgtacaggtcgg 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6525144 ctgaatggcgcggtgaaagggttttagggtttaagggcttttatatgtacgttttcgtacaggtcgg 6525078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 6524998 - 6524922
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6524998 ctcattttatataagtttaaaatgaatttttgacatttactaacttaaatattcattgttatagattatacatagta 6524922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 29563656 - 29563699
Alignment:
Q  319 gtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  29563656 gtactccctccggtcctatttacaagagacaatttactttttag 29563699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 45145867 - 45145910
Alignment:
Q  319 gtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  45145867 gtactccctccggtcctatttacaagagacaatttactttttag 45145910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 2229069 - 2229111
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  2229069 tactccctccggtcctatttacaagagacagttgactttttag 2229111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 2339289 - 2339331
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  2339289 tactccctccggtcctatttacaagagacaatttactttttag 2339331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 41915743 - 41915701
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  41915743 tactccctccggtcctatttacaagagaaaattgactttttag 41915701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 45146014 - 45145972
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  45146014 tactccctccggtcctatttacaagagaaaattgactttttag 45145972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 2229221 - 2229177
Alignment:
Q  318 agtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||| |||||||||||||||||||||||||||| |||||||||    
T  2229221 agtactacctccggtcctatttacaagagacaatttactttttag 2229177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 17934529 - 17934453
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||| |||||||||||| |||| ||  |||| |||||||||||||||||| |||||||||  ||||| |||||||||    
T  17934529 ctcaattgatataagttaaaaaagagattttgacatttactaacttaaatgttcattgttcaagattttacatagta 17934453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 323 - 362
Target Start/End: Complemental strand, 12270202 - 12270163
Alignment:
Q  323 tccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  12270202 tccctccggtcctatttacaagagacaatttactttttag 12270163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 30923919 - 30923962
Alignment:
Q  319 gtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||    
T  30923919 gtacttcctccggtcctatttacaagagacagttgactttttag 30923962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 2339439 - 2339397
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  2339439 tactccctccggtcctatttacaagagaaagttgactttttag 2339397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 25848116 - 25848074
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  25848116 tactacctccggtcctatttacaagagacagttgactttttag 25848074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 27793346 - 27793304
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  27793346 tactccctccggtcctatttacaagagaaagttgactttttag 27793304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 33642457 - 33642499
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| |||| |||||||||    
T  33642457 tactccctccggtcctatttacaagagataatttactttttag 33642499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 33837579 - 33837621
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  33837579 tactccctccggttctatttacaagagacaatttactttttag 33837621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 40465237 - 40465279
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  40465237 tactccctccgatcctatttacaagagaaaattgactttttag 40465279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 43135193 - 43135151
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  43135193 tacttcctccggtcctatttacaagagacagttgactttttag 43135151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 11293336 - 11293295
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||| |||||||||||||||||||||||||||| ||||||||    
T  11293336 tacttcctccggtcctatttacaagagacaatttacttttta 11293295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 362
Target Start/End: Complemental strand, 32159182 - 32159141
Alignment:
Q  321 actccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  32159182 actccctccgatcctatttacaagagacaatttactttttag 32159141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 21511462 - 21511538
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||| |||||||| |||| ||  |||| ||||| ||||||||||||||| ||||||  ||||| |||||||||    
T  21511462 ctcatttggtataagttaaaaaagagattttgacattcactaacttaaatattaattgtttgagattttacatagta 21511538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 41636665 - 41636589
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||| ||||||||| |||| ||  |||| ||||| ||||||||||||||||||||||  ||||| || ||||||    
T  41636665 ctcatttaatataagttaaaaaagagattttgacattcactaacttaaatattcattgttcgagattttagatagta 41636589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 32821876 - 32821801
Alignment:
Q  246 tcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||||||||||| |||| ||  |||| | ||| ||||||||||||||||||||||  ||||| ||| |||||    
T  32821876 tcatttgatataagttaaaaaagagattttgatattcactaacttaaatattcattgttcgagattttacttagta 32821801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 34028381 - 34028424
Alignment:
Q  319 gtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||  |||||| |||||||||    
T  34028381 gtactccctccggtcctatttacaagtaacaatttactttttag 34028424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 362
Target Start/End: Original strand, 22781885 - 22781923
Alignment:
Q  324 ccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  22781885 ccctccggtcctatttacaagaaacaatttactttttag 22781923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 29563807 - 29563765
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| ||||||||||||||||||||||| | ||||||||||||    
T  29563807 tacttcctccggtcctatttacaagagaaagttgactttttag 29563765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 32159033 - 32159075
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||| ||||||||||||||||||| | ||||||||||||    
T  32159033 tactcccttcggtcctatttacaagagaaatttgactttttag 32159075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 34028532 - 34028490
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | ||||| ||||||    
T  34028532 tactccctccggtcctatttacaagagaaagttgaccttttag 34028490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 361
Target Start/End: Complemental strand, 37564773 - 37564739
Alignment:
Q  327 tccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||||||||||||||||||||| ||||||||    
T  37564773 tccggtcctatttacaagagacaatttacttttta 37564739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 41915593 - 41915635
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||| ||||||||||| | |||||||    
T  41915593 tactccctccggtcctatttataagagacaatttaatttttag 41915635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 25878171 - 25878212
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||||| |||||||||| |||||| |||||||||||||    
T  25878171 tactccctccagtcctatttataagagaaaattgacttttta 25878212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 3799866 - 3799826
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    |||||||| ||||||||||||||| |||||||| |||||||    
T  3799866 tactcccttcggtcctatttacaatagacaatttacttttt 3799826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 25847972 - 25848008
Alignment:
Q  326 ctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  25847972 ctccgatcctatttacaagagacaatttactttttag 25848008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 34157810 - 34157770
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    |||||||||||||||||||||||||||| | |||| |||||    
T  34157810 tactccctccggtcctatttacaagagaaatttgaattttt 34157770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 36107 - 36061
Alignment:
Q  316 atagtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  36107 atagtactccctccggtcctatttacaagagaaaattgactttttag 36061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 42031 - 42107
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||| |||| ||  |||||||||| ||| ||||||||||||||||||  ||||| |||||||||    
T  42031 ctcatttgatataagttaaaaaagagattttcacattcactcacttaaatattcattgttcgagattttacatagta 42107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 35953 - 35995
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  35953 tactccctccggtcctatttacaagagacaatttactttttag 35995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 10049817 - 10049775
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10049817 tactccctccggtcctatttacaagagacaattgactttttag 10049775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 6086900 - 6086942
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  6086900 tactccctccggtcctatttacaagagacagttgactttttag 6086942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 9465220 - 9465178
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  9465220 tactccctccggtcctatttacaagagacaatttactttttag 9465178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 14768097 - 14768139
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  14768097 tactccctccggtcctatttacaagagacaatttactttttag 14768139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 26999170 - 26999128
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  26999170 tactccctccggtcctatttacaagagacatttgactttttag 26999128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 28406466 - 28406508
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  28406466 tactccctccggtcctatttacaagaaacaattgactttttag 28406508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 28406616 - 28406574
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  28406616 tactccctccggtcctatttacaagaaacaattgactttttag 28406574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 28945655 - 28945697
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  28945655 tactccctccggtcctatttacaagagacaatttactttttag 28945697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 28945805 - 28945763
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  28945805 tactccctccggtcctatttacaagagaaaattgactttttag 28945763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 39341371 - 39341413
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  39341371 tactccctccggtcctatttacaagagaaaattgactttttag 39341413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 26999017 - 26999062
Alignment:
Q  317 tagtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||    
T  26999017 tagtactacctccggtcctatttacaagagacaatttactttttag 26999062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 47449912 - 47449957
Alignment:
Q  317 tagtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||    
T  47449912 tagtactccctccgatcctatttacaagagacaatttactttttag 47449957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 321 - 361
Target Start/End: Original strand, 28564935 - 28564975
Alignment:
Q  321 actccctccggtcctatttacaagagacaattgacttttta 361  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  28564935 actccctccggtcctatttacaagagaaaattgacttttta 28564975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 35924716 - 35924792
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||| |||| ||  |||| ||||| ||||||||||||||||||||||  ||||| |||| ||||    
T  35924716 ctcatttgatataagttaaaaaagagattttgacattcactaacttaaatattcattgttcgagattttacacagta 35924792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 36734911 - 36734987
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||| |||||||| |||| ||  |||||||||| |||||| |||||||||||||||  ||||| |||||||||    
T  36734911 ctcatttgttataagttaaaaaagatattttcacattcactaacataaatattcattgttcgagattttacatagta 36734987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 49122945 - 49122985
Alignment:
Q  322 ctccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  49122945 ctccctccggtcctatttacaagagacaatttactttttag 49122985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 323 - 362
Target Start/End: Original strand, 9440130 - 9440169
Alignment:
Q  323 tccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  9440130 tccctccggtcctatttacaagagacagttgactttttag 9440169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 321
Target Start/End: Complemental strand, 21891927 - 21891876
Alignment:
Q  270 atttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||  ||||||||||||||||||||||||||| ||||| |||||||||    
T  21891927 atttttcgtatttactaacttaaatattcattgttagagattttacatagta 21891876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 40214898 - 40214941
Alignment:
Q  319 gtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||| | ||||||||||||    
T  40214898 gtactccctccggtcctatttacaagagaaagttgactttttag 40214941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 379069 - 379111
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  379069 tactccctccggtcctatttacaagagacaattaattttttag 379111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 6087054 - 6087008
Alignment:
Q  316 atagtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| ||| |||||||||||||||||||||||||||| |||||||||    
T  6087054 atagcactacctccggtcctatttacaagagacaatttactttttag 6087008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 8243831 - 8243789
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  8243831 tactacctccggtcctatttacaagagacaatttactttttag 8243789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 9440277 - 9440235
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  9440277 tactacctccggtcctatttacaagagacaatttactttttag 9440235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 10049667 - 10049709
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  10049667 tactacctccggtcctatttacaagagacaatttactttttag 10049709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 360
Target Start/End: Complemental strand, 25113496 - 25113458
Alignment:
Q  322 ctccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  25113496 ctccctccggtcctatttacaagagacaatttacttttt 25113458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 26123143 - 26123097
Alignment:
Q  316 atagtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||||| |  |||||||||||    
T  26123143 atagtactccctccggtcctatttacaagagaaagatgactttttag 26123097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 29019734 - 29019776
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  29019734 tactccctccggtcctatttacaagagacaatttacattttag 29019776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 42605976 - 42605934
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  42605976 tactccctccggtcctacttacaagagacaatttactttttag 42605934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 51698113 - 51698155
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  51698113 tactccctccggtcctatttacaagagaaagttgactttttag 51698155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 19202251 - 19202291
Alignment:
Q  322 ctccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  19202251 ctccctccggtcctatttacaagagaaagttgactttttag 19202291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 8243688 - 8243723
Alignment:
Q  327 tccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||| ||||||||||||||||||||||||||||    
T  8243688 tccggtcttatttacaagagacaattgactttttag 8243723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 1122424 - 1122382
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||| || ||||||||||||||||||| ||||||||||||||    
T  1122424 tactcacttcggtcctatttacaagagaaaattgactttttag 1122382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 3484331 - 3484373
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||| |||||||||||||||||||||| | |||||||    
T  3484331 tactccctccagtcctatttacaagagacaattaattttttag 3484373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 18765407 - 18765365
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||| ||||||||||||||||||| |||||| |||||||||    
T  18765407 tactccttccggtcctatttacaagaaacaatttactttttag 18765365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 19202399 - 19202357
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||| | |||||| |||||||||    
T  19202399 tactccctccggtcctatttacaaaaaacaatttactttttag 19202357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 21653343 - 21653385
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | |||| |||||||    
T  21653343 tactccctccggtcctatttacaagagaaatttgattttttag 21653385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 361
Target Start/End: Complemental strand, 25846653 - 25846619
Alignment:
Q  327 tccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||||||||||||||||||||| ||||||||    
T  25846653 tccggtcctatttacaagagacaatttacttttta 25846619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 28565084 - 28565042
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||| |||||||||||||||||||||||| | |||||||    
T  28565084 tactcccttcggtcctatttacaagagacaatttattttttag 28565042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 29019884 - 29019842
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||| | ||||||||||||||||| ||||||||||||||    
T  29019884 tactcccttcagtcctatttacaagagaaaattgactttttag 29019842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 40215049 - 40215007
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||| ||||||||| | |||||||||    
T  40215049 tactccctccggtcctatttataagagacaagttactttttag 40215007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 47257395 - 47257461
Alignment:
Q  255 ataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||| |||||||| ||||  || | |||| |||||||||||||||||| ||||| |||||||||    
T  47257395 ataagttaaaaatgaaattttggcactcactagcttaaatattcattgttaaagattttacatagta 47257461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 51698263 - 51698221
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||| | ||||||||||||||||||||| |||||||||    
T  51698263 tactccctctgatcctatttacaagagacaatttactttttag 51698221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 45406319 - 45406392
Alignment:
Q  248 atttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||||||||| |||| ||  |||| ||||| |||| |||| ||||||||||||  ||||| |||||||||    
T  45406319 atttgatataagttaaaaaagagattttgacattcactatcttatatattcattgttcgagattttacatagta 45406392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 48643756 - 48643711
Alignment:
Q  317 tagtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||| |||||  |||||||| ||||||||||||||||    
T  48643756 tagtactccctccagtccttattacaagaaacaattgactttttag 48643711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 2544606 - 2544566
Alignment:
Q  322 ctccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||  |||||||| ||||||||||||||||    
T  2544606 ctccctccggtccttattacaagaaacaattgactttttag 2544566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 8266380 - 8266340
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||||||||||||||| |||| ||| ||||||||||    
T  8266380 tactccctccggtcctatttataagaaacatttgacttttt 8266340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 19680943 - 19680867
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||| |||||||| |||| ||  |||| | ||| ||||||||||||||||||||||  || || |||||||||    
T  19680943 ctcatttggtataagttaaaaaagagattttgatattcactaacttaaatattcattgttcgagcttttacatagta 19680867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 29251219 - 29251255
Alignment:
Q  285 taacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  29251219 taacttaaatattcattgttagagattttacatagta 29251255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 31376324 - 31376284
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||||||||||  |||||||| ||||||||||||||    
T  31376324 tactccctccggtccttattacaagaaacaattgacttttt 31376284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 39617060 - 39617020
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||||||||||  |||||||| ||||||||||||||    
T  39617060 tactccctccggtccttattacaagaaacaattgacttttt 39617020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 361
Target Start/End: Complemental strand, 42841913 - 42841877
Alignment:
Q  325 cctccggtcctatttacaagagacaattgacttttta 361  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  42841913 cctccggccctatttacaagagacaatttacttttta 42841877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 46552599 - 46552655
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcatt 301  Q
    ||||||||||||||||| |||| ||  |||| ||||| | |||||||||||||||||    
T  46552599 ctcatttgatataagttaaaaaagagattttaacattcattaacttaaatattcatt 46552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 51517106 - 51517066
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||||||||||||||| |||| ||| ||||||||||    
T  51517106 tactccctccggtcctatttataagaaacatttgacttttt 51517066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 9157580 - 9157656
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||| |||| ||  |||| ||||| ||||||||||||||||||||||  ||||| |||||||||    
T  9157580 ctcatttgatataagttaaaaaagagattttgacattcactaacttaaatattcattgtttgagattttacatagta 9157656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 35427808 - 35427766
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  35427808 tactccctccggtcctatttacaagagacaatttactttttag 35427766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 28337082 - 28337006
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||| ||| |||| ||  |||| ||||| ||||||||||||||||||||||  ||||| |||||||||    
T  28337082 ctcatttgatataggttaaaaaagagattttgacattcactaacttaaatattcattgttcaagattttacatagta 28337006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 5347871 - 5347832
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttt 359  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  5347871 tactccctccggtcctatttacaagagacaatttactttt 5347832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 48268938 - 48268863
Alignment:
Q  246 tcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||||||||| | |||| ||  |||| ||||| ||||||||||||||||||||||  ||||| |||||||||    
T  48268938 tcatttgatataaggtaaaaaagagatttttacattcactaacttaaatattcattgtttgagattttacatagta 48268863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 5909620 - 5909578
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  5909620 tacttcctccggtcctatttacaagagacaatttactttttag 5909578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 12763228 - 12763270
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  12763228 tactcccttcggtcctatttacaagagacaatttactttttag 12763270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 12763378 - 12763336
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  12763378 tactccctccggtcttatttacaagagaaaattgactttttag 12763336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 20397964 - 20397922
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  20397964 tactccctccggtcctatttacaagagaaagttgactttttag 20397922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 23248817 - 23248775
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  23248817 tactacctccggtcctatttacaagagacaatttactttttag 23248775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 24875670 - 24875736
Alignment:
Q  255 ataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||| |||||||  ||||  |||||||||||||||||||||||||||| | ||| |||||||||    
T  24875670 ataagttaaaaatgagattttggcatttactaacttaaatattcattgttagatattttacatagta 24875736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 34281667 - 34281709
Alignment:
Q  319 gtactccctccggtcctatttacaagagacaattgacttttta 361  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  34281667 gtactccctccggtcctatttacaagagaaagttgacttttta 34281709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 7463448 - 7463489
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  7463448 tactccctccggtcctatttacaagaaacaatttacttttta 7463489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 24862122 - 24862046
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||  |||||||| |||||||  ||||  |||| ||||||||||||||||||||||| | ||| |||||||||    
T  24862122 ctcatttagtataagttaaaaatgagattttggcattcactaacttaaatattcattgttagatattttacatagta 24862046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 28606552 - 28606628
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||| |||||||| |||| ||  |||| ||||| || |||||||||||||||||||  ||||| |||||||||    
T  28606552 ctcatttggtataagttaaaaaagagatttttacattcacgaacttaaatattcattgttcgagattttacatagta 28606628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 5347722 - 5347764
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||| |||||| | ||||||||||||    
T  5347722 tactccctccggtcctatttataagagaaagttgactttttag 5347764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 5909470 - 5909512
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||    
T  5909470 tactcccttcggtcctatttacaagagaaaattgaccttttag 5909512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 7107779 - 7107737
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| ||||||||||||||||||||||| | ||||||||||||    
T  7107779 tactacctccggtcctatttacaagagaaagttgactttttag 7107737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 10599465 - 10599423
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||| ||||||||||||||||||||| | |||||||    
T  10599465 tactccctccgatcctatttacaagagacaatttattttttag 10599423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 12085023 - 12085065
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||| ||||||||||||||||||||| |||||||| |||||    
T  12085023 tactccatccggtcctatttacaagagaaaattgactgtttag 12085065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 357
Target Start/End: Original strand, 15074620 - 15074658
Alignment:
Q  319 gtactccctccggtcctatttacaagagacaattgactt 357  Q
    ||||||||||||||||||||||||||| |||||| ||||    
T  15074620 gtactccctccggtcctatttacaagaaacaatttactt 15074658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 20397814 - 20397856
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||| ||||||||||| | |||||||    
T  20397814 tactccctccggtcctatttataagagacaatttaatttttag 20397856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 23248667 - 23248709
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| | | ||||||||||||    
T  23248667 tactccctccggtcctatttacaagataaagttgactttttag 23248709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 321
Target Start/End: Original strand, 40952237 - 40952311
Alignment:
Q  247 catttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||| ||||||| |||  ||  |||| ||||| ||||||||||||||||||||||| | ||| |||||||||    
T  40952237 catttgacataagttaaaacggagattttaacattcactaacttaaatattcattgttagatattttacatagta 40952311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 41088851 - 41088893
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||  |||||||| ||||||||||||||||    
T  41088851 tactccctccggtccttattacaagaaacaattgactttttag 41088893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Original strand, 28918863 - 28918936
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacata 318  Q
    ||||||||  ||||||| ||||   |||||| ||||| |||| |||||||||||||||||| ||||| ||||||    
T  28918863 ctcatttgtcataagttaaaaagagatttttgacattcactatcttaaatattcattgttagagattttacata 28918936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 7463599 - 7463559
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||| ||||||||||| |||||| ||||||||||||    
T  7463599 tactccctctggtcctatttataagagaaaattgacttttt 7463559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 11668014 - 11668054
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||||||||||||||| |||| ||| ||||||||||    
T  11668014 tactccctccggtcctatttataagaaacatttgacttttt 11668054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 321
Target Start/End: Complemental strand, 25318250 - 25318181
Alignment:
Q  250 ttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||||||| ||||| || ||||  |||| |||||||||  |||||||||||| ||||| |||||||||    
T  25318250 ttgatataagttaaaaataaaattttggcattcactaactta--tattcattgttagagattttacatagta 25318181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 28606364 - 28606288
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||| |||| ||| |||| |||||  | | ||||||||||| |||||  ||||| |||||||||    
T  28606364 ctcatttgatataagttaaaaaagaaatttttacattccccatcttaaatattctttgttcaagattttacatagta 28606288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 28677316 - 28677356
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||||||||||||||| |||| ||| ||||||||||    
T  28677316 tactccctccggtcctatttataagaaacatttgacttttt 28677356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 41260020 - 41260064
Alignment:
Q  316 atagtactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  41260020 atagtactccctccggtcctatttacaagagacaatttacttttt 41260064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 6761614 - 6761572
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  6761614 tactccctccggtcctatttacaagagacagttgactttttag 6761572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 16241266 - 16241308
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  16241266 tactccctccggtcctatttacaagagacagttgactttttag 16241308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 20427000 - 20427042
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  20427000 tactccctccggtcctatttacaagagacaatttactttttag 20427042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 29866081 - 29866123
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  29866081 tactccctccggtcctatttacaagagacaatttactttttag 29866123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 39377835 - 39377877
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  39377835 tactccctccggtcctatttacaagagacaatttactttttag 39377877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Complemental strand, 16241419 - 16241374
Alignment:
Q  317 tagtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||    
T  16241419 tagtactacctccggtcctatttacaagagacaatttactttttag 16241374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 33891904 - 33891831
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacata 318  Q
    ||||||||||||||||| |||| ||  |||| ||||| ||||||||||||||||||||||  ||||| ||||||    
T  33891904 ctcatttgatataagttaaaaaagagattttgacattcactaacttaaatattcattgttcgagattttacata 33891831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 5998124 - 5998048
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||| ||||||||| |||| ||  |||| ||||| ||||||||||||||||||||||  ||||| |||||||||    
T  5998124 ctcatttaatataagttaaaaaagagattttgacattcactaacttaaatattcattgttcgagattttacatagta 5998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 11711473 - 11711434
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttt 359  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  11711473 tactccctccggtcctatttacaagagacaatttactttt 11711434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 311 - 362
Target Start/End: Complemental strand, 45065738 - 45065687
Alignment:
Q  311 tatacatagtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||| || ||||||||||||||||||| |||||||||    
T  45065738 tataaatagtactccctccagttctatttacaagagacaatttactttttag 45065687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 4740708 - 4740750
Alignment:
Q  319 gtactccctccggtcctatttacaagagacaattgacttttta 361  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  4740708 gtactccctccggtcctatttacaagaaacaattaacttttta 4740750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 6761464 - 6761506
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  6761464 tactacctccggtcctatttacaagagacaatttactttttag 6761506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 7765793 - 7765835
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  7765793 tactccctccggtcctatttacaagagaaagttgactttttag 7765835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 9152528 - 9152486
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  9152528 tactccctccggtcttatttacaagaaacaattgactttttag 9152486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 12486141 - 12486099
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  12486141 tactccctctggtcctatttacaagaaacaattgactttttag 12486099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 13775710 - 13775752
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| |||| |||||||||    
T  13775710 tactccctccggtcctatttacaagagataatttactttttag 13775752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 25892093 - 25892051
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  25892093 tactacctccggtcctatttacaagagacaatttactttttag 25892051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 30864667 - 30864709
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||| |||||||| ||||||||||||||    
T  30864667 tactccctccggtcctattgacaagagaaaattgactttttag 30864709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 32750341 - 32750383
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  32750341 tactccctccggtcctatttacaagagaaagttgactttttag 32750383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 44737282 - 44737324
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  44737282 tactccctccggtcttatttacaagagaaaattgactttttag 44737324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 44737431 - 44737389
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  44737431 tactacctccggtcctatttacaagagacaatttactttttag 44737389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 18452717 - 18452676
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||| ||||||||||||||||||||| |||||||||||    
T  18452717 tactcccttcggtcctatttacaagagacagttgacttttta 18452676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 6201232 - 6201308
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||| |||| ||  | || ||||| |||||||||||| |||||||||  ||||| |||||||||    
T  6201232 ctcatttgatataagttaaaaaagagatcttgacattcactaacttaaatgttcattgttcgagattttacatagta 6201308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 9152378 - 9152418
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  9152378 tactccctccggtcctatttacaagaaacatttgacttttt 9152418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 32918460 - 32918536
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||| |||||||| |||||||  |||| ||||| | |||| |||||||||||||||  ||||| |||||||||    
T  32918460 ctcatttggtataagttaaaaatgagattttgacattcattaacctaaatattcattgttcgagattttacatagta 32918536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 304
Target Start/End: Original strand, 14660303 - 14660362
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgtt 304  Q
    ||||||||||||||||| |||| ||  |||| | ||||||||||||||||||| ||||||    
T  14660303 ctcatttgatataagttaaaaaagagattttgatatttactaacttaaatatttattgtt 14660362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 327 - 362
Target Start/End: Complemental strand, 39377973 - 39377938
Alignment:
Q  327 tccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| |||||||||    
T  39377973 tccggtcctatttacaagagacaatttactttttag 39377938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 349
Target Start/End: Original strand, 13724101 - 13724131
Alignment:
Q  319 gtactccctccggtcctatttacaagagaca 349  Q
    |||||||||||||||||||||||||||||||    
T  13724101 gtactccctccggtcctatttacaagagaca 13724131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 13775860 - 13775818
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||| |||||| | ||||||||||||    
T  13775860 tactccctccggtcctatttataagagaaagttgactttttag 13775818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 18452568 - 18452610
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| ||||| |||||||||||||||||||||| |||||||||    
T  18452568 tactacctccagtcctatttacaagagacaatttactttttag 18452610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 23667426 - 23667468
Alignment:
Q  319 gtactccctccggtcctatttacaagagacaattgacttttta 361  Q
    ||||| |||||||| |||||||||||| |||||||||||||||    
T  23667426 gtacttcctccggttctatttacaagaaacaattgacttttta 23667468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 25795387 - 25795345
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||  |||||||| ||||||||||||||||    
T  25795387 tactccctccggtccttattacaagaaacaattgactttttag 25795345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 25891943 - 25891985
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||| ||||||||| |||||||| ||||||||||||    
T  25891943 tactccctccgatcctatttataagagacagttgactttttag 25891985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 29866231 - 29866189
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| | | ||||||||||||    
T  29866231 tactccctccggtcctatttacaagataaagttgactttttag 29866189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 30864824 - 30864782
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||| ||| |||||||||||||||||| |||||||||    
T  30864824 tactccctccagtcttatttacaagagacaatttactttttag 30864782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 40430815 - 40430773
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||    
T  40430815 tactctctccggtcctatttataagagacaatttactttttag 40430773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 42263619 - 42263577
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||| ||||||||||||||| |||||| |||||||||    
T  42263619 tactccctccagtcctatttacaagaaacaatttactttttag 42263577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 32493802 - 32493730
Alignment:
Q  248 atttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||||||||| |||| ||  |||| ||||| |||||||| |||||||||||||  ||||| |||||||||    
T  32493802 atttgatataagttaaaaacgagattttgacattcactaactt-aatattcattgttcgagattttacatagta 32493730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 21646899 - 21646975
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||| ||||| || |||| ||  |||| ||||| |||||| |||||||||||||||  ||||| |||||||||    
T  21646899 ctcatttgttataaattaaaaaagatattttgacattcactaacctaaatattcattgttcgagattttacatagta 21646975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 28176178 - 28176246
Alignment:
Q  249 tttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacat 317  Q
    ||||||||||||| |||| ||  |||| ||||| | ||||||||||||||||||||  ||||| |||||    
T  28176178 tttgatataagttaaaaaagagattttgacattcattaacttaaatattcattgttcgagattttacat 28176246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 30761527 - 30761487
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||||||||||||||| |||| ||| ||||||||||    
T  30761527 tactccctccggtcctatttataagaaacatttgacttttt 30761487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 39952390 - 39952318
Alignment:
Q  246 tcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacata 318  Q
    ||||||| |||||||| |||| ||  |||| ||||| || |||||||||||||||||||  ||||| ||||||    
T  39952390 tcatttggtataagttaaaaaagagattttgacattcaccaacttaaatattcattgttcgagattttacata 39952318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 41398972 - 41399048
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||  |||| ||  | || | ||| ||||||||||||||||||||||  ||||| |||||||||    
T  41398972 ctcatttgatataagtcaaaaaagagatcttgaaattcactaacttaaatattcattgttcgagattttacatagta 41399048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 390955 - 390912
Alignment:
Q  319 gtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  390955 gtactccctccggtcctatttacaagagacaatttactttttag 390912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 885601 - 885643
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  885601 tactccctccggtcctatttacaagagacagttgactttttag 885643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 6045830 - 6045788
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  6045830 tactccctccggtcctatttacaagagacaatttactttttag 6045788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 14931402 - 14931360
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  14931402 tactccctccggtcatatttacaagagacaattgactttttag 14931360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 24949630 - 24949672
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  24949630 tactccctccggtcctatttacaagagaaaattgactttttag 24949672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 24949780 - 24949738
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  24949780 tactccctccggtcctatttacaagagacaatttactttttag 24949738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 7405443 - 7405485
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||| |||||||||||||||||||||||| |||||||||    
T  7405443 tactcccttcggtcctatttacaagagacaatttactttttag 7405485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 7405593 - 7405551
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||| ||||||||||||| ||||||||||||||    
T  7405593 tactccctccggtcttatttacaagagaaaattgactttttag 7405551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 8558913 - 8558955
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  8558913 tactccctccagtcctatttacaagagaaaattgactttttag 8558955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 17225392 - 17225350
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||| ||||||||||||||||||||| |||||||||    
T  17225392 tactccctccgatcctatttacaagagacaatttactttttag 17225350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 22880917 - 22880959
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  22880917 tactacctccggtcctatttacaagagacaatttactttttag 22880959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 22898852 - 22898894
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  22898852 tactacctccggtcctatttacaagagacaatttactttttag 22898894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 766578 - 766534
Alignment:
Q  318 agtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| |||| | |||||||    
T  766578 agtactccctccggtcctatttacaagagataatttattttttag 766534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 30686541 - 30686585
Alignment:
Q  318 agtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||    
T  30686541 agtactctctccagtcctatttacaagagacaatttactttttag 30686585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 321
Target Start/End: Complemental strand, 17186995 - 17186928
Alignment:
Q  254 tataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||| |||| ||  |||| ||||| ||||||||||||||||||||||  ||||| |||||||||    
T  17186995 tataagttaaaaaagagattttgacattcactaacttaaatattcattgttcgagattttacatagta 17186928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 6047945 - 6047903
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||| ||||||||||||| |||| |||||||||    
T  6047945 tactccctccggtcatatttacaagagataatttactttttag 6047903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 31971029 - 31971071
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||| ||||||||||||| | ||||||||||||    
T  31971029 tactccctccggtcttatttacaagagaaagttgactttttag 31971071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 31971179 - 31971137
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| || ||||||    
T  31971179 tactacctccggtcctatttacaagagacaatttacattttag 31971137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 33859489 - 33859531
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||| ||||||||||||||| |||||||| |||||||||    
T  33859489 tactcccttcggtcctatttacaatagacaatttactttttag 33859531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 33859639 - 33859597
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | || |||||||||    
T  33859639 tactccctccggtcctatttacaagagaaagttaactttttag 33859597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 34639039 - 34639081
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||    
T  34639039 tacttcctccagtcctatttacaagagacagttgactttttag 34639081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 318
Target Start/End: Complemental strand, 13246923 - 13246850
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacata 318  Q
    |||||||||||||||||||||| ||   ||| ||||| | ||||||| ||||||||||||  ||||| ||||||    
T  13246923 ctcatttgatataagtttaaaaagatactttgacattcattaacttatatattcattgttcgagattttacata 13246850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 30686693 - 30686652
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||||| || |||||||||||||| |||||||||||||    
T  30686693 tactccctcccgttctatttacaagagaaaattgacttttta 30686652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 21381670 - 21381594
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||| ||||||||| |||| ||  |||| ||||| ||||| ||||||||||||||||  | ||| |||||||||    
T  21381670 ctcatttcatataagttaaaaaagagatttttacattcactaatttaaatattcattgttcgaaattttacatagta 21381594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 27909124 - 27909084
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||| |||||||||||||||| ||| ||||||||||    
T  27909124 tactccctctggtcctatttacaagaaacatttgacttttt 27909084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 592 - 550
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  592 tactccctccggtcctatttacaagagaaaattgactttttag 550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 7053647 - 7053689
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  7053647 tactccctccggtcctatttacaagagacaatttactttttag 7053689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 9601742 - 9601700
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  9601742 tactccctccggtcctatttacaagagacaatttactttttag 9601700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 25027843 - 25027801
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  25027843 tactccctccggtcctatttacaagagacagttgactttttag 25027801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 29374319 - 29374277
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  29374319 tactccctccggtcctatttacaagagacagttgactttttag 29374277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 37699779 - 37699821
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  37699779 tactccctccggtcctatttacaagagacagttgactttttag 37699821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 362
Target Start/End: Original strand, 31802954 - 31802999
Alignment:
Q  317 tagtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||    
T  31802954 tagtactccctccggtcctatttacaagagaaagttgactttttag 31802999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 35286277 - 35286208
Alignment:
Q  248 atttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacat 317  Q
    |||||||||||||| |||| ||  |||||||||| ||||||||||||||||||||||  ||||| |||||    
T  35286277 atttgatataagttaaaaaggagattttcacattcactaacttaaatattcattgttcaagattttacat 35286208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 2959240 - 2959280
Alignment:
Q  322 ctccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  2959240 ctccctccggtcctatttacaagagaaaattgactttttag 2959280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 2967709 - 2967749
Alignment:
Q  322 ctccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  2967709 ctccctccggtcctatttacaagagaaaattgactttttag 2967749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 32270247 - 32270323
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||| |||| ||  |||| ||||| ||||||||||||||||||||||  ||||| ||| |||||    
T  32270247 ctcatttgatataagttaaaaaagagattttgacattcactaacttaaatattcattgttcgagattttacttagta 32270323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 254 - 321
Target Start/End: Complemental strand, 10192847 - 10192780
Alignment:
Q  254 tataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||| |||| ||  |||| ||||||||||||||||||||||||||||  ||||| |||||||||    
T  10192847 tataagttaaaaaggagattttgacatttactaacttaaatattcattgttcgagattttacatagta 10192780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 903965 - 904007
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  903965 tactccctccggtcctatttacaagagaaagttgactttttag 904007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 1643493 - 1643451
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  1643493 tactccctccggtcctatttataagagacagttgactttttag 1643451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 7749917 - 7749959
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  7749917 tactccctccggtcctatttacaagagacaatttaatttttag 7749959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 7945836 - 7945878
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| |||||| |||||||||    
T  7945836 tactccctccggtcctatttacaagaaacaatttactttttag 7945878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 13144879 - 13144921
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  13144879 tactacctccggtcctatttacaagagacaatttactttttag 13144921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 13145029 - 13144987
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  13145029 tactccctccggtcctatttacaagagacagttgattttttag 13144987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 15569480 - 15569438
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  15569480 tacttcctccggtcctatttacaagagacaatttactttttag 15569438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 25027693 - 25027735
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  25027693 tactacctccggtcctatttacaagagacaatttactttttag 25027735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 26898340 - 26898298
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  26898340 tactccctccggtcctatttacaagagaaagttgactttttag 26898298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 31803107 - 31803065
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| |||||| |||||||||    
T  31803107 tactccctccggtcctatttacaagaaacaatttactttttag 31803065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 41989563 - 41989605
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  41989563 tacttcctccggtcctatttacaagagacaatttactttttag 41989605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 21610450 - 21610409
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  21610450 tactccctccggtcctatttacaagaaacaattaacttttta 21610409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 36417046 - 36417087
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  36417046 tactccctccggtcctatttacaagagaaatttgacttttta 36417087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 865866 - 865807
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgtt 304  Q
    ||||||| ||||||||| |||| ||  |||| ||||| ||||||||||||||||||||||    
T  865866 ctcatttaatataagttaaaaaagagattttgacattcactaacttaaatattcattgtt 865807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 1108289 - 1108324
Alignment:
Q  327 tccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| |||||||||    
T  1108289 tccggtcctatttacaagagacaatttactttttag 1108324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 317
Target Start/End: Original strand, 17218347 - 17218418
Alignment:
Q  246 tcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacat 317  Q
    |||||||||||||||| |||| ||  |||| ||||| | ||||||||||||||||||||  ||||| |||||    
T  17218347 tcatttgatataagttaaaaaagagattttgacattcattaacttaaatattcattgttcgagattttacat 17218418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 362
Target Start/End: Original strand, 21090378 - 21090417
Alignment:
Q  323 tccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  21090378 tccctccggtcctatttacaagagaaaattaactttttag 21090417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 327 - 362
Target Start/End: Complemental strand, 37699922 - 37699887
Alignment:
Q  327 tccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| |||||||||    
T  37699922 tccggtcctatttacaagagacaatttactttttag 37699887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 362
Target Start/End: Original strand, 41046830 - 41046869
Alignment:
Q  323 tccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  41046830 tccctccggtcctatttacaagagacaatctactttttag 41046869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 1643343 - 1643385
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| ||||||||||||||||||| |||||||| |||||||||    
T  1643343 tactacctccggtcctatttacaatagacaatttactttttag 1643385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 2959388 - 2959346
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||| ||||||||||||||||||| |||||| |||||||||    
T  2959388 tactccatccggtcctatttacaagaaacaatttactttttag 2959346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 2967857 - 2967815
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||| ||||||||||||||||||| |||||| |||||||||    
T  2967857 tactccatccggtcctatttacaagaaacaatttactttttag 2967815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 6338464 - 6338422
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||| ||||||||||||| |||||||| |||||||||    
T  6338464 tactccctccagtcctatttacaaaagacaatttactttttag 6338422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 9601592 - 9601634
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||| ||||||||||||||||||||| | ||||||||||||    
T  9601592 tactccttccggtcctatttacaagagaaagttgactttttag 9601634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 18353357 - 18353315
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||| |||||||||||||| |||||| |||||||||    
T  18353357 tactccctccgatcctatttacaagaaacaatttactttttag 18353315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 23411314 - 23411272
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||| ||||||||||||| |||||| |||||||    
T  23411314 tactccctccggtcttatttacaagagaaaattgattttttag 23411272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 29374169 - 29374211
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||| ||||||||||||||||||||| |||||||||    
T  29374169 tactacctccgatcctatttacaagagacaatttactttttag 29374211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 36419134 - 36419092
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||| ||| |||||||||||||||||||| |||||||||    
T  36419134 tactcccttcggacctatttacaagagacaatttactttttag 36419092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 41815334 - 41815292
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||| ||||||||||||||||||| | ||||||||||||    
T  41815334 tactcccttcggtcctatttacaagagaaagttgactttttag 41815292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 7053796 - 7053756
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  7053796 tactccctccggtcctatttacaagaga-agttgacttttta 7053756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 26898190 - 26898231
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||| | |||||||||||||||||||||| ||||||||    
T  26898190 tactcccttcagtcctatttacaagagacaatttacttttta 26898231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 36977652 - 36977603
Alignment:
Q  272 ttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||| ||||| ||||||||||||||||||||||  ||||| |||||||||    
T  36977652 ttttgacattcactaacttaaatattcattgttcgagattttacatagta 36977603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 38393904 - 38393863
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||| |||||||| |||||||||||| |||||||||||||||    
T  38393904 tacttcctccggttctatttacaagaaacaattgacttttta 38393863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 5841557 - 5841513
Alignment:
Q  277 acatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||| ||||||||||||||||||||||  ||||| |||||||||    
T  5841557 acattcactaacttaaatattcattgttcgagattttacatagta 5841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 9771660 - 9771736
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||||| ||| || |||| ||  |||| ||||| |||||||||||||||||| |||  ||||| |||||||||    
T  9771660 ctcatttgatttaaattaaaaaagagattttgacattcactaacttaaatattcatcgttcgagattctacatagta 9771736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 13789723 - 13789771
Alignment:
Q  312 atacatagtactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||| ||||||||||||||||||||| |||| ||| || |||||||    
T  13789723 atacataatactccctccggtcctatttataagaaacattttacttttt 13789771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 13932457 - 13932501
Alignment:
Q  317 tagtactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||||||||||||||  ||| |||| |||||||||||||||    
T  13932457 tagtactccctccggtccttgttataagaaacaattgacttttta 13932501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 42522387 - 42522312
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||| ||||   |||||| ||||| |||| |||||||||| ||||||  ||||| |||||||||    
T  42522387 ctcatttgatataagttaaaaaaagattttt-acattcactaccttaaatatttattgttcgagattttacatagta 42522312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 4758776 - 4758818
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  4758776 tactccctccggtcctatttacaagagacagttgactttttag 4758818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 23125645 - 23125687
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  23125645 tactccctccggtcctatttacaagagacaatttactttttag 23125687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 53621327 - 53621369
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  53621327 tactccctccggtcctatttacaagagacagttgactttttag 53621369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 49122518 - 49122562
Alignment:
Q  318 agtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||    
T  49122518 agtactccctccggttctatttacaagagacagttgactttttag 49122562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 580410 - 580452
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  580410 tactccctccgatcctatttacaagagaaaattgactttttag 580452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 2385194 - 2385236
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  2385194 tactccctccggtcctatttacaagagaaagttgactttttag 2385236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 3086021 - 3085979
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  3086021 tactccctccggtcctatttacaagagacaatttattttttag 3085979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 4758926 - 4758884
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  4758926 tactacctccggtcctatttacaagagacaatttactttttag 4758884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 5970428 - 5970386
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||| |||||||||||||||||||||||||| |||||||||    
T  5970428 tactccttccggtcctatttacaagagacaatttactttttag 5970386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 6246757 - 6246715
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  6246757 tactccctccggtcctatttacaagagaaagttgactttttag 6246715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 18135462 - 18135420
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  18135462 tactacctccggtcctatttacaagagacaatttactttttag 18135420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 19485721 - 19485679
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| |||||| |||||||    
T  19485721 tactccctccggtcctatttacaagagaaaattgattttttag 19485679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 20688565 - 20688523
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| ||||||||||||||||||||||||| ||||||||||||    
T  20688565 tactacctccggtcctatttacaagagacagttgactttttag 20688523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 27006504 - 27006546
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||| |||||||||||||||||||||| |||||||||    
T  27006504 tactccctccagtcctatttacaagagacaatttactttttag 27006546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 36099486 - 36099528
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  36099486 tactacctccggtcctatttacaagagacaatttactttttag 36099528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 36099636 - 36099594
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  36099636 tactccctccggtcctatttacaagagacagttgattttttag 36099594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 38688060 - 38688018
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| |||||| |||||||||    
T  38688060 tactccctccggtcctatttacaagaaacaatttactttttag 38688018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 44200121 - 44200079
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||| |||||||||||||||||| |||||||||    
T  44200121 tactccctccggtcttatttacaagagacaatttactttttag 44200079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 49122669 - 49122627
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  49122669 tactacctccggtcctatttacaagagacaatttactttttag 49122627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 53621477 - 53621435
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  53621477 tactacctccggtcctatttacaagagacaatttactttttag 53621435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 15170882 - 15170923
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  15170882 tactccctccggtcttatttacaagagaaaattgacttttta 15170923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 50680088 - 50680014
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||| |||| ||  |||| ||||| |||||||||||||||||| |||  ||||| |||||||||    
T  50680088 ctcatttgatataagttaaaaaaga--ttttgacattcactaacttaaatattcatagttcgagattttacatagta 50680014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 24968563 - 24968639
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||||||| |||| |||  ||  |||| ||||| ||||||||||||||||||||||  ||||| |||||||||    
T  24968563 ctcatttgatattagttaaaaccgagattttgacattcactaacttaaatattcattgttcgagattttacatagta 24968639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 35321380 - 35321452
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacat 317  Q
    ||||||||||||||||| |||| ||  |||| ||||| ||||| ||||||||||||||||  ||||| |||||    
T  35321380 ctcatttgatataagttaaaaaagatattttaacattcactaagttaaatattcattgttcgagattttacat 35321452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 39877400 - 39877444
Alignment:
Q  318 agtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| || ||| |||||||||    
T  39877400 agtactccctccggtcctatttacaagaaacgatttactttttag 39877444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 362
Target Start/End: Complemental strand, 18430401 - 18430362
Alignment:
Q  323 tccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||| |||||||||||||||||||||||| |||||||||    
T  18430401 tcccttcggtcctatttacaagagacaatttactttttag 18430362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 580560 - 580518
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| | |||||||    
T  580560 tactacctccggtcctatttacaagagacaatttattttttag 580518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 2279523 - 2279565
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||| || ||||||||||||||||||||||| |||||||||    
T  2279523 tactccttctggtcctatttacaagagacaatttactttttag 2279565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 2385344 - 2385302
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||| ||||||||||||||||||||||| | |||||||    
T  2385344 tactccctctggtcctatttacaagagacaatttaatttttag 2385302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 31227270 - 31227312
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||| ||||||||||||||||||| |||||| |||||||||    
T  31227270 tactccatccggtcctatttacaagaaacaatttactttttag 31227312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 31227420 - 31227378
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||| ||||||||||||||||||| | ||||||||||||    
T  31227420 tactcccttcggtcctatttacaagagaaagttgactttttag 31227378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 38687910 - 38687952
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||| ||||||||||||| | ||||||||||||    
T  38687910 tactccctccggtcttatttacaagagaaagttgactttttag 38687952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 39834273 - 39834315
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||| |||||||||||||||||| | |||||||    
T  39834273 tactccctccggtcttatttacaagagacaatttattttttag 39834315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 51833011 - 51833053
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||| |||||||||||||||||||||||||| | |||||||    
T  51833011 tactccatccggtcctatttacaagagacaatttattttttag 51833053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 53225793 - 53225751
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||| |||| | ||||||||||||||    
T  53225793 tactccctccggtcctatttataagaaaaaattgactttttag 53225751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 55292111 - 55292153
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| ||||||||||||||||||||||| | ||||||||||||    
T  55292111 tacttcctccggtcctatttacaagagaaatttgactttttag 55292153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 19485571 - 19485612
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||||| ||||||||||||||| |||||| ||||||||    
T  19485571 tactccctcctgtcctatttacaagaaacaatttacttttta 19485612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 37874797 - 37874744
Alignment:
Q  248 atttgatataagtttaaaatgaatttttcacatttactaacttaaatattcatt 301  Q
    |||||||||||||| |||| ||  |||| ||||| |||||||||||||||||||    
T  37874797 atttgatataagttaaaaaagagattttgacattcactaacttaaatattcatt 37874744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 6246613 - 6246649
Alignment:
Q  326 ctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  6246613 ctccggttctatttacaagagacaatttactttttag 6246649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 29833270 - 29833306
Alignment:
Q  326 ctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||| | ||||||||||||||    
T  29833270 ctccggtcctatttacaagataaaattgactttttag 29833306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 31854526 - 31854486
Alignment:
Q  322 ctccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| ||||||||||||||||||| |||||| |||||||||    
T  31854526 ctccttccggtcctatttacaagaaacaatttactttttag 31854486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 32193470 - 32193514
Alignment:
Q  316 atagtactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||||||||||||||  ||| |||| ||||||||||||||    
T  32193470 atagtactccctccggtccttattataagaaacaattgacttttt 32193514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 44111744 - 44111784
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||||||||||||||| |||| ||| ||||||||||    
T  44111744 tactccctccggtcctatttataagaaacatttgacttttt 44111784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 2352458 - 2352416
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  2352458 tactccctccggtcctatttacaagagacagttgactttttag 2352416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 9548821 - 9548779
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  9548821 tactccctccggtcctatttacaagagaaaattgactttttag 9548779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 23398229 - 23398187
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  23398229 tactccctccggtcctatttacaatagacaattgactttttag 23398187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 38830632 - 38830591
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  38830632 tactccctccggtcctatttacaagagacagttgacttttta 38830591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 34331447 - 34331523
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||| | ||||||| |||||||  ||||  |||| ||||||||||||||||||||||| ||||| |||||||||    
T  34331447 ctcatttaacataagttaaaaatgagattttagcattcactaacttaaatattcattgttagagattttacatagta 34331523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 36699909 - 36699985
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||| |||| ||  |||| ||||| ||||| ||||||||||||||||  ||||| |||||||||    
T  36699909 ctcatttgatataagttaaaaaagagattttgacattcactaatttaaatattcattgttcgagattttacatagta 36699985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 36716013 - 36716089
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||| |||| ||  |||| ||||| ||||| ||||||||||||||||  ||||| |||||||||    
T  36716013 ctcatttgatataagttaaaaaagagattttgacattcactaatttaaatattcattgttcgagattttacatagta 36716089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 10380388 - 10380431
Alignment:
Q  319 gtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||    
T  10380388 gtacttcctccggtcctatttacaagagaaaattgactttttag 10380431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 29312437 - 29312480
Alignment:
Q  319 gtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||| |||||||||||||||||||||||||||| |||||||||    
T  29312437 gtacttcctccggtcctatttacaagagacaatttactttttag 29312480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 51162066 - 51161991
Alignment:
Q  246 tcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||||||||||| |||| ||  |||| ||||| ||||||||||||||||||||||  |||||  ||||||||    
T  51162066 tcatttgatataagttaaaaaagagattttgacattcactaacttaaatattcattgttcgagatttaacatagta 51161991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 2352308 - 2352350
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  2352308 tactacctccggtcctatttacaagagacaatttactttttag 2352350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 2961103 - 2961145
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| | ||||||||||||    
T  2961103 tactccctccggtcctatttacaagagaaagttgactttttag 2961145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 2961253 - 2961211
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  2961253 tactccctctggtcctatttacaagagacaatttactttttag 2961211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 9301918 - 9301960
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  9301918 tactccctccggtcctatttacaagagacagttaactttttag 9301960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 10065254 - 10065296
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| |||||| |||||||    
T  10065254 tactccctccggtcctatttacaagagaaaattgattttttag 10065296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 10380539 - 10380497
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  10380539 tactccctctggtcctatttacaagagacaatttactttttag 10380497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 14281589 - 14281631
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  14281589 tactacctccggtcctatttacaagagacaatttactttttag 14281631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 34718890 - 34718932
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  34718890 tactccctccggtcctatttacaagagacaatttaatttttag 34718932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 38830482 - 38830524
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||||| |||||||||    
T  38830482 tactacctccggtcctatttacaagagacaatttactttttag 38830524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 47792786 - 47792709
Alignment:
Q  245 ctcatttgatataagtttaaaat-gaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||| ||||  ||  |||| |||| |||||||||||||||||||||||  ||||| |||||||||    
T  47792786 ctcatttgatataagttaaaaaaagagattttaacatgtactaacttaaatattcattgttcgagattttacatagta 47792709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 362
Target Start/End: Original strand, 9548665 - 9548713
Alignment:
Q  314 acatagtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||| |||| ||||||||||||||||||||| |||||| |||||||||    
T  9548665 acataatacttcctccggtcctatttacaagaaacaatttactttttag 9548713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 25892157 - 25892081
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||  ||||||| |||||||  |||  ||||| ||||||||||||||||||||||| | ||| |||||||||    
T  25892157 ctcatttggcataagttaaaaatgagatttcgacattcactaacttaaatattcattgttagaaattttacatagta 25892081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 43413605 - 43413529
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    ||||||||||||||||| |||| ||  |||| | ||| ||||||||||||||||||||||  ||||| |||| ||||    
T  43413605 ctcatttgatataagttaaaaaagagattttgatattcactaacttaaatattcattgtttgagattttacacagta 43413529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 362
Target Start/End: Complemental strand, 45536310 - 45536270
Alignment:
Q  322 ctccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| |||| |||||||||    
T  45536310 ctccctccggtcctatttacaagagataatttactttttag 45536270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 362
Target Start/End: Original strand, 2512413 - 2512452
Alignment:
Q  323 tccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  2512413 tccctccgatcctatttacaagagacaatttactttttag 2512452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 14281740 - 14281697
Alignment:
Q  320 tactccctccgg-tcctatttacaagagacaattgactttttag 362  Q
    |||||||||||| |||||||||||||||||| ||||||||||||    
T  14281740 tactccctccgggtcctatttacaagagacagttgactttttag 14281697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 311 - 362
Target Start/End: Original strand, 26733775 - 26733826
Alignment:
Q  311 tatacatagtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| ||| ||||| |||||||||||||||||||| |||||| |||||||||    
T  26733775 tatatataatactctctccggtcctatttacaagaaacaattaactttttag 26733826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 7796089 - 7796131
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||||| ||| | ||||||||    
T  7796089 tactccctccggtcctatttacaagagaaaatagtctttttag 7796131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 9302068 - 9302026
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||| ||||||||||| |||||||||    
T  9302068 tactacctccggtcctatttataagagacaatttactttttag 9302026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 23398079 - 23398121
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||| |||||||||||||||||||||||||| | |||||||||    
T  23398079 tactacctccggtcctatttacaagagacaacttactttttag 23398121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 26550436 - 26550394
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||| |||||| ||||||||||| |||||||||    
T  26550436 tactccctccggtcatatttataagagacaatttactttttag 26550394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 28989271 - 28989313
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||| ||||||||||||||||| |||||| |||||||||    
T  28989271 tactcccttcggtcctatttacaagaaacaatttactttttag 28989313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 29892279 - 29892237
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||| | || ||||||||||||||||    
T  29892279 tactccctccggtcctatttataggaaacaattgactttttag 29892237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 45536162 - 45536204
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||  ||||||||||||| ||||||||||||||    
T  45536162 tactccctccggttttatttacaagagaaaattgactttttag 45536204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 46320298 - 46320256
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||| | ||||||||||||||||||||| |||||||||    
T  46320298 tactccctctgttcctatttacaagagacaatttactttttag 46320256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 12628548 - 12628604
Alignment:
Q  255 ataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagatt 311  Q
    ||||||| |||||||  |||| ||||| |||| |||||||||||||||||| |||||    
T  12628548 ataagttaaaaatgagattttgacattcactagcttaaatattcattgttagagatt 12628604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 15801883 - 15801959
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||||||||| || |||| ||  ||||  |||| ||||||||||||||||| ||||  ||||| |||||||||    
T  15801883 ctcatttgatataaattaaaaaagagattttggcattcactaacttaaatattcactgttcgagattttacatagta 15801959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 26924362 - 26924322
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttt 360  Q
    ||||||||||||||||||||| |||| ||| ||||||||||    
T  26924362 tactccctccggtcctatttataagaaacatttgacttttt 26924322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 29153061 - 29152985
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||| |||||||| ||||  |  |||| ||||| ||||||||| ||||||||||||  ||||| |||||||||    
T  29153061 ctcatttggtataagttaaaaaaaatattttgacattcactaacttatatattcattgtttgagattttacatagta 29152985  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 40161323 - 40161280
Alignment:
Q  318 agtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||  |||||||||||||||||| |||||||||    
T  40161323 agtactccctccggta-tatttacaagagacaatttactttttag 40161280  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Complemental strand, 41812265 - 41812189
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgttatagattatacatagta 321  Q
    |||||||  |||||||| |||| ||  |||| ||||| ||||||||||||||||||| ||  ||||| |||||||||    
T  41812265 ctcatttagtataagttaaaaaagagattttgacattcactaacttaaatattcattcttcgagattttacatagta 41812189  T

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Target: scaffold0221 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 362
Target Start/End: Complemental strand, 11180 - 11137
Alignment:
Q  319 gtactccctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||||||||| | ||||||||||||    
T  11180 gtactccctccggtcctatttacaagagaaagttgactttttag 11137  T

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Target: scaffold0221; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 11029 - 11071
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||| |||||||||||||||| |||||||||    
T  11029 tactccctccggtcctttttacaagagacaatttactttttag 11071  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 29243 - 29285
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||||||||||||||||||| |||||| |||||||||    
T  29243 tactccctccggtcctatttacaagaaacaatttactttttag 29285  T

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Target: scaffold0123; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 362
Target Start/End: Complemental strand, 29388 - 29351
Alignment:
Q  325 cctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  29388 cctccggtcctatttacaagagaaagttgactttttag 29351  T

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Target: scaffold0144 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 38974 - 38933
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgacttttta 361  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  38974 tactccctccggtcctatttacaagagacagttgacatttta 38933  T

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Target: scaffold0144; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 38830 - 38866
Alignment:
Q  326 ctccggtcctatttacaagagacaattgactttttag 362  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  38830 ctccggtcctagttacaagagacaatttactttttag 38866  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 304
Target Start/End: Complemental strand, 116927 - 116868
Alignment:
Q  245 ctcatttgatataagtttaaaatgaatttttcacatttactaacttaaatattcattgtt 304  Q
    ||||||| ||||||||| |||| ||  |||| || |||||||||||||||||||||||||    
T  116927 ctcatttcatataagttaaaaaagagattttaacttttactaacttaaatattcattgtt 116868  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 359
Target Start/End: Original strand, 77341 - 77383
Alignment:
Q  317 tagtactccctccggtcctatttacaagagacaattgactttt 359  Q
    |||||||||||||||||||||||| |||||| | |||||||||    
T  77341 tagtactccctccggtcctatttataagagaaagttgactttt 77383  T

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Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 352
Target Start/End: Complemental strand, 77493 - 77461
Alignment:
Q  320 tactccctccggtcctatttacaagagacaatt 352  Q
    ||||||||||||||||||||| |||||||||||    
T  77493 tactccctccggtcctatttataagagacaatt 77461  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 160787 - 160861
Alignment:
Q  248 atttgatataagtttaaaatgaatttttcacatttact-aacttaaatattcattgttatagattatacatagta 321  Q
    |||| ||||||||| |||| ||  |||||||||| ||| |||||||||||||||||||  ||||| |||||||||    
T  160787 atttcatataagttaaaaaagagattttcacattcacttaacttaaatattcattgttcgagattttacatagta 160861  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 362
Target Start/End: Complemental strand, 492454 - 492412
Alignment:
Q  320 tactccctccggtcctatttacaagagacaattgactttttag 362  Q
    |||||||||| ||||||||||||||| |||||| |||||||||    
T  492454 tactccctccagtcctatttacaagaaacaatttactttttag 492412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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