View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17318_high_45 (Length: 265)
Name: NF17318_high_45
Description: NF17318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17318_high_45 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 16 - 249
Target Start/End: Original strand, 44432635 - 44432868
Alignment:
| Q |
16 |
ctgtgaagaaggtcaaattgtcgaaggctctcaccatccccgatgggacaaccgttacggatgcatgtagacgaatggccgctcgccgtgtcgatgcggt |
115 |
Q |
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| T |
44432635 |
ctgtgaagaaggtcaaattgtcgaaggctctcaccatccccgatgggacaaccgttacggatgcatgtagacgaatggccgctcgccgtgtcgacgcggt |
44432734 |
T |
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| Q |
116 |
tcttttaactgattccagtgctcttctttctggaattctcactgacaaggtctctctctttttctatattttatgttttatttccttcattcaaattcaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44432735 |
tcttttaactgattccagtgctcttctttctggaattctcactgacaaggtctctctctttttctatattttatgttttatttccttcattcaaattcaa |
44432834 |
T |
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| Q |
216 |
attcaatgttcaatgttgtttgttaatttgtttt |
249 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
44432835 |
attcaatgttcaatgttgtttgttaatttgtttt |
44432868 |
T |
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