View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17318_low_14 (Length: 449)

Name: NF17318_low_14
Description: NF17318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17318_low_14
NF17318_low_14
[»] chr1 (34 HSPs)
chr1 (134-433)||(5574286-5574587)
chr1 (2-67)||(29638826-29638891)
chr1 (2-67)||(41564775-41564840)
chr1 (2-67)||(48962097-48962162)
chr1 (2-67)||(23399884-23399949)
chr1 (10-67)||(30414975-30415032)
chr1 (2-67)||(29094643-29094708)
chr1 (2-67)||(51666871-51666936)
chr1 (2-66)||(11121592-11121656)
chr1 (4-67)||(835982-836045)
chr1 (2-67)||(8577397-8577462)
chr1 (134-178)||(8577529-8577574)
chr1 (2-67)||(12972601-12972666)
chr1 (2-63)||(12990380-12990441)
chr1 (2-66)||(40118610-40118674)
chr1 (4-67)||(26760673-26760736)
chr1 (2-67)||(37947115-37947180)
chr1 (134-178)||(41564907-41564952)
chr1 (134-177)||(40118742-40118786)
chr1 (3-67)||(40240007-40240071)
chr1 (2-66)||(48389974-48390038)
chr1 (134-179)||(1100215-1100261)
chr1 (134-179)||(26585200-26585246)
chr1 (2-67)||(37435468-37435534)
chr1 (17-67)||(50460622-50460672)
chr1 (150-179)||(110745-110774)
chr1 (2-67)||(5574170-5574235)
chr1 (134-178)||(22674711-22674756)
chr1 (2-59)||(22674816-22674873)
chr1 (2-67)||(31244630-31244695)
chr1 (150-179)||(36954669-36954698)
chr1 (2-67)||(43105216-43105281)
chr1 (134-177)||(12990496-12990540)
chr1 (134-177)||(23400016-23400060)
[»] chr7 (35 HSPs)
chr7 (2-67)||(1709395-1709460)
chr7 (1-67)||(17039268-17039334)
chr7 (2-67)||(24380616-24380681)
chr7 (2-67)||(47945094-47945159)
chr7 (2-67)||(47950524-47950589)
chr7 (4-67)||(48383217-48383280)
chr7 (2-67)||(23034208-23034273)
chr7 (2-67)||(27704546-27704611)
chr7 (2-67)||(41910080-41910145)
chr7 (2-67)||(48639280-48639345)
chr7 (2-67)||(29923782-29923846)
chr7 (2-67)||(38197772-38197837)
chr7 (2-67)||(41538591-41538656)
chr7 (134-179)||(27704433-27704479)
chr7 (134-179)||(33341152-33341198)
chr7 (2-60)||(40207726-40207784)
chr7 (134-179)||(48639410-48639456)
chr7 (134-178)||(11070227-11070272)
chr7 (2-67)||(45335974-45336039)
chr7 (134-176)||(17039158-17039201)
chr7 (4-66)||(22331108-22331170)
chr7 (134-179)||(28548248-28548294)
chr7 (134-179)||(41538480-41538526)
chr7 (134-177)||(47944982-47945027)
chr7 (134-177)||(47950412-47950457)
chr7 (134-182)||(2600561-2600610)
chr7 (2-47)||(39765387-39765432)
chr7 (137-177)||(40207830-40207871)
chr7 (134-178)||(41910212-41910257)
chr7 (134-174)||(45335865-45335906)
chr7 (134-177)||(11789718-11789762)
chr7 (134-177)||(29763830-29763874)
chr7 (134-177)||(30538626-30538670)
chr7 (3-67)||(37848516-37848580)
chr7 (140-179)||(48522154-48522194)
[»] chr4 (41 HSPs)
chr4 (2-67)||(38960555-38960620)
chr4 (2-66)||(21766659-21766723)
chr4 (2-67)||(8614293-8614358)
chr4 (2-63)||(32294647-32294708)
chr4 (2-67)||(36110245-36110310)
chr4 (4-67)||(50291393-50291456)
chr4 (2-67)||(18944396-18944461)
chr4 (2-67)||(22893979-22894044)
chr4 (2-67)||(22945647-22945712)
chr4 (2-64)||(19807313-19807375)
chr4 (2-67)||(1727984-1728049)
chr4 (2-67)||(4878078-4878143)
chr4 (2-67)||(31413681-31413746)
chr4 (2-67)||(33777005-33777070)
chr4 (2-67)||(39699362-39699427)
chr4 (30-64)||(23133472-23133506)
chr4 (2-67)||(8487746-8487811)
chr4 (134-178)||(29863550-29863595)
chr4 (2-67)||(45678374-45678439)
chr4 (2-66)||(1868788-1868852)
chr4 (3-66)||(43307261-43307323)
chr4 (134-179)||(23133564-23133610)
chr4 (134-179)||(29577463-29577509)
chr4 (141-179)||(33776906-33776944)
chr4 (134-175)||(43307396-43307438)
chr4 (134-179)||(50291280-50291326)
chr4 (2-67)||(6093500-6093565)
chr4 (2-63)||(24310416-24310477)
chr4 (141-181)||(31413809-31413850)
chr4 (2-67)||(43983008-43983073)
chr4 (2-67)||(46799866-46799931)
chr4 (134-178)||(48650283-48650328)
chr4 (2-67)||(51107337-51107402)
chr4 (134-178)||(51107468-51107513)
chr4 (138-179)||(55609197-55609238)
chr4 (2-66)||(4577676-4577739)
chr4 (151-179)||(18874966-18874994)
chr4 (134-181)||(35037605-35037653)
chr4 (134-177)||(36110134-36110178)
chr4 (134-178)||(53781864-53781908)
chr4 (134-177)||(55960700-55960744)
[»] chr2 (49 HSPs)
chr2 (2-67)||(12257012-12257077)
chr2 (2-63)||(5852573-5852634)
chr2 (2-67)||(11152594-11152659)
chr2 (2-67)||(16463403-16463468)
chr2 (2-67)||(18749258-18749323)
chr2 (2-66)||(28679239-28679303)
chr2 (4-66)||(35798321-35798383)
chr2 (2-67)||(1096238-1096303)
chr2 (2-67)||(26387726-26387791)
chr2 (2-67)||(34141554-34141619)
chr2 (2-67)||(35705812-35705877)
chr2 (2-67)||(38598245-38598309)
chr2 (4-67)||(44897737-44897800)
chr2 (134-179)||(19637227-19637273)
chr2 (134-179)||(19835820-19835866)
chr2 (2-67)||(8757655-8757720)
chr2 (134-178)||(12256900-12256945)
chr2 (2-67)||(23141465-23141530)
chr2 (2-67)||(23553255-23553320)
chr2 (2-67)||(30340105-30340170)
chr2 (2-67)||(38027510-38027575)
chr2 (2-57)||(40115636-40115691)
chr2 (2-57)||(45202027-45202082)
chr2 (5-67)||(17999855-17999917)
chr2 (134-179)||(30339991-30340037)
chr2 (134-179)||(34141440-34141486)
chr2 (2-67)||(11828715-11828780)
chr2 (2-67)||(35007996-35008061)
chr2 (2-67)||(35203644-35203709)
chr2 (2-67)||(35518386-35518451)
chr2 (2-55)||(38778014-38778067)
chr2 (2-67)||(41156898-41156963)
chr2 (134-177)||(5852474-5852518)
chr2 (134-177)||(11126463-11126507)
chr2 (134-177)||(18749390-18749434)
chr2 (3-67)||(22296025-22296089)
chr2 (137-179)||(12208440-12208483)
chr2 (4-67)||(43205204-43205267)
chr2 (137-178)||(3839409-3839451)
chr2 (134-179)||(27529527-27529573)
chr2 (134-178)||(11152726-11152771)
chr2 (134-174)||(28679131-28679172)
chr2 (151-179)||(4263897-4263925)
chr2 (134-177)||(6328667-6328711)
chr2 (2-66)||(24491572-24491636)
chr2 (138-181)||(24766148-24766192)
chr2 (3-67)||(27538828-27538892)
chr2 (134-177)||(35203776-35203820)
chr2 (134-177)||(44897626-44897670)
[»] scaffold0514 (2 HSPs)
scaffold0514 (2-67)||(1742-1807)
scaffold0514 (134-177)||(1872-1916)
[»] scaffold0014 (2 HSPs)
scaffold0014 (2-67)||(145158-145223)
scaffold0014 (134-178)||(145060-145105)
[»] chr8 (40 HSPs)
chr8 (2-67)||(25430757-25430822)
chr8 (2-67)||(28713204-28713269)
chr8 (2-67)||(28720551-28720616)
chr8 (2-67)||(28728193-28728258)
chr8 (2-64)||(18550093-18550155)
chr8 (2-67)||(27300457-27300522)
chr8 (2-67)||(34838165-34838230)
chr8 (2-67)||(1646367-1646432)
chr8 (2-67)||(21649065-21649130)
chr8 (2-67)||(33692832-33692897)
chr8 (6-67)||(35701742-35701803)
chr8 (2-67)||(37471754-37471819)
chr8 (2-64)||(34578232-34578294)
chr8 (2-67)||(4148550-4148615)
chr8 (134-178)||(18549978-18550023)
chr8 (2-67)||(22203110-22203175)
chr8 (2-67)||(22836034-22836099)
chr8 (134-178)||(23708975-23709020)
chr8 (2-67)||(41776286-41776351)
chr8 (3-66)||(13924121-13924184)
chr8 (4-67)||(23709087-23709150)
chr8 (2-45)||(40570641-40570684)
chr8 (134-179)||(22203242-22203288)
chr8 (134-179)||(28713091-28713137)
chr8 (134-179)||(28720438-28720484)
chr8 (134-179)||(28728080-28728126)
chr8 (134-179)||(32674259-32674305)
chr8 (134-179)||(35701854-35701900)
chr8 (2-67)||(23265248-23265313)
chr8 (134-178)||(37784401-37784446)
chr8 (2-67)||(43590805-43590870)
chr8 (134-177)||(10591900-10591944)
chr8 (134-177)||(21649195-21649239)
chr8 (134-177)||(27300346-27300390)
chr8 (2-66)||(42651032-42651096)
chr8 (134-179)||(4148682-4148728)
chr8 (134-178)||(5742684-5742729)
chr8 (134-178)||(34578404-34578449)
chr8 (137-177)||(42688427-42688468)
chr8 (134-177)||(40459789-40459833)
[»] chr5 (32 HSPs)
chr5 (2-67)||(37821036-37821101)
chr5 (2-67)||(39032499-39032564)
chr5 (2-67)||(6458878-6458943)
chr5 (2-67)||(21771368-21771433)
chr5 (2-67)||(35616696-35616761)
chr5 (3-67)||(18729173-18729237)
chr5 (2-67)||(8442270-8442335)
chr5 (2-67)||(14126525-14126590)
chr5 (2-67)||(35595881-35595946)
chr5 (2-63)||(36899376-36899437)
chr5 (3-66)||(12203257-12203320)
chr5 (4-67)||(14522861-14522924)
chr5 (134-179)||(3031832-3031878)
chr5 (134-179)||(18729316-18729362)
chr5 (134-179)||(20985556-20985602)
chr5 (134-179)||(34693243-34693289)
chr5 (134-179)||(39032631-39032677)
chr5 (2-67)||(12612912-12612977)
chr5 (2-63)||(22864274-22864335)
chr5 (134-178)||(25585483-25585528)
chr5 (2-67)||(34693111-34693176)
chr5 (2-67)||(38919957-38920022)
chr5 (134-181)||(14522991-14523039)
chr5 (2-49)||(17574119-17574166)
chr5 (134-180)||(29765827-29765874)
chr5 (2-49)||(30103348-30103395)
chr5 (134-176)||(30103478-30103521)
chr5 (134-179)||(12891123-12891169)
chr5 (138-187)||(19844340-19844390)
chr5 (134-179)||(31626103-31626149)
chr5 (2-67)||(42364540-42364605)
chr5 (2-58)||(35578970-35579026)
[»] chr3 (48 HSPs)
chr3 (2-67)||(14838940-14839005)
chr3 (2-66)||(32152005-32152069)
chr3 (2-63)||(29555736-29555797)
chr3 (2-67)||(30664612-30664677)
chr3 (2-67)||(42888668-42888732)
chr3 (2-67)||(43894880-43894945)
chr3 (2-67)||(50745660-50745725)
chr3 (2-67)||(55264928-55264993)
chr3 (2-64)||(884651-884713)
chr3 (2-67)||(9027724-9027789)
chr3 (2-67)||(43149238-43149303)
chr3 (2-67)||(43220037-43220102)
chr3 (2-67)||(44689914-44689979)
chr3 (2-67)||(48117447-48117512)
chr3 (2-66)||(33971995-33972059)
chr3 (2-66)||(35368723-35368787)
chr3 (2-57)||(29846786-29846841)
chr3 (137-179)||(45517687-45517730)
chr3 (3-49)||(26280684-26280730)
chr3 (2-64)||(27276848-27276910)
chr3 (134-179)||(29555865-29555911)
chr3 (140-178)||(41112105-41112143)
chr3 (6-67)||(7351537-7351598)
chr3 (134-178)||(7351665-7351710)
chr3 (7-67)||(9158936-9158996)
chr3 (134-177)||(14839072-14839116)
chr3 (2-66)||(29057760-29057824)
chr3 (134-177)||(30664503-30664547)
chr3 (134-177)||(48205045-48205089)
chr3 (134-177)||(55264817-55264861)
chr3 (2-49)||(31763936-31763983)
chr3 (2-57)||(40821755-40821810)
chr3 (134-176)||(44689793-44689836)
chr3 (134-179)||(9159063-9159109)
chr3 (2-40)||(11404849-11404887)
chr3 (134-179)||(50025725-50025771)
chr3 (134-178)||(2280176-2280221)
chr3 (138-179)||(16479630-16479671)
chr3 (134-174)||(17118400-17118441)
chr3 (2-67)||(38296557-38296622)
chr3 (134-178)||(42888799-42888844)
chr3 (138-181)||(288721-288765)
chr3 (2-50)||(44827081-44827129)
chr3 (134-177)||(47141627-47141671)
chr3 (140-179)||(49361857-49361897)
chr3 (137-180)||(52381179-52381223)
chr3 (151-179)||(53715337-53715365)
chr3 (134-177)||(54233495-54233539)
[»] scaffold0024 (1 HSPs)
scaffold0024 (2-67)||(48765-48830)
[»] chr6 (13 HSPs)
chr6 (2-67)||(34792117-34792182)
chr6 (2-67)||(9395232-9395297)
chr6 (2-67)||(16121263-16121328)
chr6 (6-64)||(17442936-17442994)
chr6 (2-67)||(32135332-32135397)
chr6 (2-67)||(608556-608621)
chr6 (2-67)||(6997445-6997510)
chr6 (2-67)||(10557520-10557585)
chr6 (134-178)||(34792021-34792066)
chr6 (136-177)||(6997579-6997621)
chr6 (30-67)||(27790158-27790195)
chr6 (2-66)||(19713106-19713170)
chr6 (134-177)||(27790262-27790306)
[»] scaffold0058 (1 HSPs)
scaffold0058 (2-67)||(3054-3119)


Alignment Details
Target: chr1 (Bit Score: 254; Significance: 1e-141; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 134 - 433
Target Start/End: Original strand, 5574286 - 5574587
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttgtgaatattatcttttccacttcttttttaggtctaggaaaagttgaagcttt 232  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5574286 ttgtacaaaagttgtacaaaaatgattgtacaaatatcatttcttttgtgaatattatcttttccacttcttttttaggtctaggaaaagttgaagcttt 5574385  T
Q  233 ttctgattttatctatgaagtatgaacaatcccccttcaaattatcatatgtctcggcgtatcagtgttgtgtccggtatccatatccgtatcagtattt 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||| |||||| ||||||||| |||||||||||    
T  5574386 ttctgattttatctatgaagtatgaacaatcccccttcaaattattagatgtctcgacgtatcagtgttgtatccggtgtccatatccatatcagtattt 5574485  T
Q  333 ttgtagga-ttttattgaaccttcaacattctagatagaagacttgtggagtggagatagtatcaattagtcattaaacatctgaacttatcatgcgtat 431  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5574486 ttgtaggatttttattgaaccttcaacattctagatagaagacttgtggagtggagatagtatcaattagtcattaaacatctgaacttatcatgcgtat 5574585  T
Q  432 tt 433  Q
    ||    
T  5574586 tt 5574587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 29638891 - 29638826
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  29638891 gatatttgaacaactcttttggtacaatttttgggacaattttgttgtgttctcttcttattggtc 29638826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 41564775 - 41564840
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  41564775 gatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtc 41564840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 48962162 - 48962097
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  48962162 gatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtc 48962097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 23399884 - 23399949
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  23399884 gatatttaaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtc 23399949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 30415032 - 30414975
Alignment:
Q  10 aacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  30415032 aacaactcttttggtacaacttttgggacaatcttgttgtgttctcttcttattggtc 30414975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 29094643 - 29094708
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| || || ||||||||||| ||| ||||||||||||||||||||||    
T  29094643 gatatttgaacaactcttttgatacaacttttgggacaaccttattgtgttctcttcttattggtc 29094708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 51666936 - 51666871
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| |||||||||||||| ||| |||||||| |||||| |||||||||    
T  51666936 gatatttgaacaactattttgctataatttttgggataatattgttgtgctctctttttattggtc 51666871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 11121656 - 11121592
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||||||  |||||||| ||||||    
T  11121656 gatatttgaacaactattttggtataacttttgtgacaatcttgttgttgtctcttctcattggt 11121592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 836045 - 835982
Alignment:
Q  4 tatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| |||||||| || |||||||||||||||||| | ||||||||| |||||||    
T  836045 tatttgaacaactcttttggtacaacttttgggacaatcttgttattttctcttctcattggtc 835982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 8577397 - 8577462
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||||||  ||| |||| |||||||    
T  8577397 gatatttgaacaactattttggtataacttttgggacaaccttgttgttctctattctcattggtc 8577462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 8577529 - 8577574
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 178  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  8577529 ttgtacaaaagttatacaaaaatggttgtacaaatatcatttctct 8577574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 12972601 - 12972666
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| | ||||||||||| |||| ||||||| |||||||||||| || |||||||||    
T  12972601 gatatttgaacaattcttttggtataacttttaggacaattttgttgtgttctttttttattggtc 12972666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 12990380 - 12990441
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttatt 63  Q
    ||||||||||||||| ||||| || || ||||||||||| |||||||||||||||| |||||    
T  12990380 gatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctctttttatt 12990441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 40118610 - 40118674
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||||| ||||||| || |||||||||||||| ||||||||| | |||| ||||||||    
T  40118610 gatatttgaacaatttttttgctacaatttttgggacaaccttgttgtgctttctttttattggt 40118674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 26760736 - 26760673
Alignment:
Q  4 tatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||| ||||||||||||| ||||| ||||| ||||| ||||||||| |||||| |||||||||    
T  26760736 tatttaaacaacttttttgttataacttttgagacaaccttgttgtgctctctttttattggtc 26760673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 37947115 - 37947180
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| || || ||||||||||| ||||||||  |||||||| |||||||    
T  37947115 gatatttgaacaactattttgttacaacttttgggacaaccttgttgttctctcttctcattggtc 37947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 41564907 - 41564952
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||    
T  41564907 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctct 41564952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 40118742 - 40118786
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  40118742 ttgtacaaaaattatacaaaaatgattgtacaaatatcatttctc 40118786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 40240007 - 40240071
Alignment:
Q  3 atatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||||||||||||| || || ||||||||||| ||||||||| | |||| | |||||||    
T  40240007 atatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctatcttttcattggtc 40240071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 48389974 - 48390038
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||||| | |||| ||||||||||||||||||  ||| |||||| |||| ||||||||    
T  48389974 gatatttgaacaattcttttagtataatttttgggacaactttgctgtgttatctttttattggt 48390038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 1100261 - 1100215
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    |||||||||| || |||||||||| ||||||||||||||||||||||    
T  1100261 ttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctctt 1100215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 26585200 - 26585246
Alignment:
Q  134 ttgtacaaaagttat-acaaaaatgttgtacaaatatcatttctctt 179  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||    
T  26585200 ttgtacaaaagttatcacaaaatagttgtacaaatatcatttctctt 26585246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 37435468 - 37435534
Alignment:
Q  2 gatatttgaacaacttttttgg-tataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| |||||| | |||||||||||||||||  |||||||| ||| || |||||||||    
T  37435468 gatatttgaacaattttttttgctataatttttgggacaactttgttgtgctctttttttattggtc 37435534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 50460622 - 50460672
Alignment:
Q  17 tttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||| || ||||||||||||||| |||||||||| |||| |||||||||    
T  50460622 tttttgctacaatttttgggacaattttgttgtgttttctttttattggtc 50460672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 110774 - 110745
Alignment:
Q  150 caaaaatgttgtacaaatatcatttctctt 179  Q
    ||||||||||||||||||||||||||||||    
T  110774 caaaaatgttgtacaaatatcatttctctt 110745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 5574170 - 5574235
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| |  |||| |||||||||||||||||  || ||||||||| || |||||||||    
T  5574170 gatatttgaacaattcgtttgatataatttttgggacaactttattgtgttctttttttattggtc 5574235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 22674756 - 22674711
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 178  Q
    |||||||||| || ||||||||| ||||||||||||||||||||||    
T  22674756 ttgtacaaaaattgtacaaaaatagttgtacaaatatcatttctct 22674711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 22674873 - 22674816
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttct 59  Q
    ||||||||||||| |||||||||| || |||||| | ||| ||||||| |||||||||    
T  22674873 gatatttgaacaatttttttggtacaacttttggaataattttgttgttttctcttct 22674816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 31244630 - 31244695
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| ||  |||||||||| | ||||||  |||||||| |||||||    
T  31244630 gatatttgaacaactattttggtacaacatttgggacaaccatgttgttctctcttctcattggtc 31244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 179
Target Start/End: Complemental strand, 36954698 - 36954669
Alignment:
Q  150 caaaaatgttgtacaaatatcatttctctt 179  Q
    ||||||||||||||||||||||||||||||    
T  36954698 caaaaatgttgtacaaatatcatttctctt 36954669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 43105281 - 43105216
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| | |||||||| ||||||||||||||  || ||||  |||||| |||||||||    
T  43105281 gatatttgaacaattattttggtacaatttttgggacaactttattgttctctctttttattggtc 43105216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 12990496 - 12990540
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    |||||| |||||| |||||||||| ||||||||||||||||||||    
T  12990496 ttgtacgaaagttgtacaaaaatggttgtacaaatatcatttctc 12990540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 23400016 - 23400060
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    ||||||||||||| || ||||||| ||||||||||||||||||||    
T  23400016 ttgtacaaaagttgtataaaaatggttgtacaaatatcatttctc 23400060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 1709460 - 1709395
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1709460 gatatttgaacaactcttttggtataatttttgggacaatcttgttgtgttctctttttattggtc 1709395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17039334 - 17039268
Alignment:
Q  1 cgatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||| | |||||||    
T  17039334 cgatatttgaacaatttttttgctataatttttgggacaaccttgttgtgttctcttttcattggtc 17039268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 24380616 - 24380681
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || |||||| |||| ||||||||||||||||||||||||||    
T  24380616 gatatttgaacaactcttttggtacaacttttggaacaaccttgttgtgttctcttcttattggtc 24380681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 47945159 - 47945094
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||||||||||    
T  47945159 gatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttcttattggtc 47945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 47950589 - 47950524
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||||||||||    
T  47950589 gatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttcttattggtc 47950524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 48383217 - 48383280
Alignment:
Q  4 tatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||| |||||||||||||||||||||||||||||||| || || | |||||||||||||||||    
T  48383217 tatttcaacaacttttttggtataatttttgggacaattttattattttctcttcttattggtc 48383280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 23034208 - 23034273
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || ||||||||||| ||||||||| ||| ||||||||||||    
T  23034208 gatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgctcttttcttattggtc 23034273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 27704611 - 27704546
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| || || |||||||||||  |||||||||||||||||||||||||    
T  27704611 gatatttgaacaactcttttgttacaacttttgggacaactttgttgtgttctcttcttattggtc 27704546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 41910080 - 41910145
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| | |||||||| || |||| |||||| ||||||||||||||||||||||||||    
T  41910080 gatatttgaacaattcttttggtacaacttttaggacaaccttgttgtgttctcttcttattggtc 41910145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 48639280 - 48639345
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || |||||| |||| ||||||||||||||||| ||||||||    
T  48639280 gatatttgaacaactcttttggtacaacttttggaacaaccttgttgtgttctcttcgtattggtc 48639345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 29923846 - 29923782
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || |||||| |||| ||||||||||||| ||||||||||||    
T  29923846 gatatttgaacaactcttttggtacaacttttgg-acaaccttgttgtgttcttttcttattggtc 29923782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 38197837 - 38197772
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||| | |||| | |||||||    
T  38197837 gatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctatcttttcattggtc 38197772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 41538656 - 41538591
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| | ||||| || || ||||||||||| ||||||||||| ||||||||||||||    
T  41538656 gatatttgaacaattcttttgatacaacttttgggacaaccttgttgtgttatcttcttattggtc 41538591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 27704479 - 27704433
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 179  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  27704479 ttgtacaaaagttgtacaaaaatagttgtacaaatatcatttctctt 27704433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 33341152 - 33341198
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 179  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  33341152 ttgtacaaaagttatactaaaattgttgtacaaatatcatttctctt 33341198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 60
Target Start/End: Original strand, 40207726 - 40207784
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttctt 60  Q
    |||||||||| || |||||||||| || |||||||||||| ||||||||||||| ||||    
T  40207726 gatatttgaataatttttttggtacaacttttgggacaattttgttgtgttctcctctt 40207784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 48639410 - 48639456
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  48639410 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 48639456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 11070272 - 11070227
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  11070272 ttgtacaaaagttatactaaaatggttgtacaaatatcatttctct 11070227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 45336039 - 45335974
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||| ||| |||||||| || ||||||||||| ||||||||  |||||| |||||||||    
T  45336039 gatatttgaactactcttttggtacaaattttgggacaaccttgttgttctctctttttattggtc 45335974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 17039201 - 17039158
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttct 176  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  17039201 ttgtacaaaaattatacaaaaatagttgtacaaatatcatttct 17039158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 22331108 - 22331170
Alignment:
Q  4 tatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||| ||||||| || |||||||||||||| |||||| || |||||| | ||||||    
T  22331108 tatttgaacaatttttttgctacaatttttgggacaaccttgttatgctctcttttcattggt 22331170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 28548248 - 28548294
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 179  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  28548248 ttgtacaaaagttgtaccaaaatagttgtacaaatatcatttctctt 28548294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 41538526 - 41538480
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    |||||||||| || |||||||||| ||||||||||||||||||||||    
T  41538526 ttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctctt 41538480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 47945027 - 47944982
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg--ttgtacaaatatcatttctc 177  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||    
T  47945027 ttgtacaaaagttgtacaaaaatggtttgtacaaatatcatttctc 47944982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 47950457 - 47950412
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg--ttgtacaaatatcatttctc 177  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||    
T  47950457 ttgtacaaaagttgtacaaaaatggtttgtacaaatatcatttctc 47950412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 2600561 - 2600610
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttgtg 182  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||| ||||    
T  2600561 ttgtacaaaagttgtactaaaatggttgtacaaatatcatttctcatgtg 2600610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 39765387 - 39765432
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgtt 47  Q
    ||||||||||||||| ||| | |||||||||||| |||||||||||    
T  39765387 gatatttgaacaactatttagatataatttttggaacaatcttgtt 39765432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Original strand, 40207830 - 40207871
Alignment:
Q  137 tacaaaagttatacaaaaat-gttgtacaaatatcatttctc 177  Q
    |||||||||| ||||||||| |||||||||||||||||||||    
T  40207830 tacaaaagttgtacaaaaatagttgtacaaatatcatttctc 40207871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 41910212 - 41910257
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 178  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||    
T  41910212 ttgtacaaaagttgtacaaaaatggttgtacaaatatcattactct 41910257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 45335906 - 45335865
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcattt 174  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  45335906 ttgtacaaaagttgtacaaaaatggttgtacaaatatcattt 45335865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 11789718 - 11789762
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    ||||||||||||| ||| |||||| ||||||||||||||||||||    
T  11789718 ttgtacaaaagttgtactaaaatggttgtacaaatatcatttctc 11789762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 29763874 - 29763830
Alignment:
Q  134 ttgtacaaaagttat-acaaaaatgttgtacaaatatcatttctc 177  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||    
T  29763874 ttgtacaaaagttatcacaaaatggttgtacaaatatcatttctc 29763830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 30538670 - 30538626
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 177  Q
    ||||||||||||| ||| ||||| |||||||||||||||||||||    
T  30538670 ttgtacaaaagttgtaccaaaattgttgtacaaatatcatttctc 30538626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 37848516 - 37848580
Alignment:
Q  3 atatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||||||||||||| || || |||| ||| || ||||||||| |||||| | |||||||    
T  37848516 atatttgaacaacttttttgctacaacttttaggataaccttgttgtgctctcttttcattggtc 37848580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 179
Target Start/End: Complemental strand, 48522194 - 48522154
Alignment:
Q  140 aaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  48522194 aaaagttgtacaaaaatggttgtacaaatatcatttctctt 48522154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 8e-22; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 38960555 - 38960620
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||    
T  38960555 gatatttgaacaactcttttgatacaatttttgggacaatcttgttgtgttctcttcttattggtc 38960620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 21766723 - 21766659
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  21766723 gatatttgaacaactcttttggtataacttttgggacaaccttgttgtgttctcttcttattggt 21766659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 8614358 - 8614293
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||||||||||||    
T  8614358 gatatttgaacaactttttttgtacaatttttgggacaaccttgttgtgttttcttcttattggtc 8614293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 32294647 - 32294708
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttatt 63  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  32294647 gatatttgaacaactcttttggtataatttttgggacaaccttgttgtgttcttttcttatt 32294708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 36110310 - 36110245
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||||||||||    
T  36110310 gatatttgaacaactcttttgatacaatttttgggacaaccttgttgtgttctcttcttattggtc 36110245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 50291456 - 50291393
Alignment:
Q  4 tatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  50291456 tatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtc 50291393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 18944461 - 18944396
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || ||||||||||| ||| ||||||||||||||||||||||    
T  18944461 gatatttgaacaactcttttggtacaacttttgggacaaccttattgtgttctcttcttattggtc 18944396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 22894044 - 22893979
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||| |||||| |||||||||    
T  22894044 gatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctctttttattggtc 22893979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 22945712 - 22945647
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||| |||||| |||||||||    
T  22945712 gatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctctttttattggtc 22945647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 19807313 - 19807375
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattg 64  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||||| | |||||||||||    
T  19807313 gatatttgaacaactttttttgtacaatttttgggacaaccttgttgtgatatcttcttattg 19807375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 1727984 - 1728049
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||| || |||||| ||| |||||||||||||| ||||||||||| ||||||||||||||    
T  1727984 gatatttgaataatttttttagtacaatttttgggacaaccttgttgtgttttcttcttattggtc 1728049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 4878143 - 4878078
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || ||||||||||| ||||||||| |||||| | |||||||    
T  4878143 gatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtc 4878078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 31413681 - 31413746
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || ||||| ||||| ||||||||| |||||| |||||||||    
T  31413681 gatatttgaacaacttttttgctacaagttttgtgacaaccttgttgtgctctctttttattggtc 31413746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 33777070 - 33777005
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| ||||||||||| || ||||||||  |||||| |||||||||    
T  33777070 gatatttgaacaactattttggtacaatttttgggataaccttgttgttctctctttttattggtc 33777005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 39699362 - 39699427
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| || || |||||| |||| ||| ||||||||||||||||||||||    
T  39699362 gatatttgaacaactcttttgatacaacttttggaacaaccttattgtgttctcttcttattggtc 39699427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 23133472 - 23133506
Alignment:
Q  30 ttttgggacaatcttgttgtgttctcttcttattg 64  Q
    |||||||||||||||||||||||||||||||||||    
T  23133472 ttttgggacaatcttgttgtgttctcttcttattg 23133506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 8487811 - 8487746
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| ||||||| || || ||||| ||||| ||||||||| |||||| |||||||||    
T  8487811 gatatttgaacaatttttttgctacaacttttgagacaaccttgttgtgctctctttttattggtc 8487746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 29863595 - 29863550
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  29863595 ttgtacaaaagttataccaaaatggttgtacaaatatcatttctct 29863550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 45678439 - 45678374
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || |||||| |||| ||||||||  |||||| |||||||||    
T  45678439 gatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctctttttattggtc 45678374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 1868788 - 1868852
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||||||||||||  || || ||||||||||| ||||||||| ||| || ||||||||    
T  1868788 gatatttgaacaacttttttactacaacttttgggacaaccttgttgtgctctttttttattggt 1868852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 43307261 - 43307323
Alignment:
Q  3 atatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    |||||||||||||||||||  || ||||||||||| || ||||||||| |||||| ||||||||    
T  43307261 atatttgaacaacttttttt-tacaatttttgggataaccttgttgtgctctctttttattggt 43307323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 23133564 - 23133610
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 179  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  23133564 ttgtacaaaagttgtacaaaaatggttgtacaaatataatttctctt 23133610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 29577463 - 29577509
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 179  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||    
T  29577463 ttgtacaaaaattgtacaaaaatagttgtacaaatatcatttctctt 29577509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 33776944 - 33776906
Alignment:
Q  141 aaagttatacaaaaatgttgtacaaatatcatttctctt 179  Q
    |||||| ||||||||| ||||||||||||||||||||||    
T  33776944 aaagttgtacaaaaatattgtacaaatatcatttctctt 33776906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 43307396 - 43307438
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttc 175  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  43307396 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttc 43307438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 50291326 - 50291280
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  50291326 ttgtataaaagttgtacaaaaatgattgtacaaatatcatttctctt 50291280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 6093500 - 6093565
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||| ||||||| |||||||||||| |||| |||||| |||||||  |||||| |||| ||||    
T  6093500 gatattttaacaactattttggtataatctttgagacaattttgttgttctctctttttatcggtc 6093565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 24310416 - 24310477
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttatt 63  Q
    ||||||||||||| ||||||| || || ||||||||||| ||||||||| ||| || |||||    
T  24310416 gatatttgaacaatttttttgctacaacttttgggacaaccttgttgtgctctttttttatt 24310477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 181
Target Start/End: Original strand, 31413809 - 31413850
Alignment:
Q  141 aaagttatacaaaaat-gttgtacaaatatcatttctcttgt 181  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  31413809 aaagttgtacaaaaatagttgtacaaatatcatttctcttgt 31413850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 43983073 - 43983008
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||  |||||||| || |||| ||||||||| |||||  |||||||| |||||||    
T  43983073 gatatttgaacaaccattttggtacaacttttaggacaatctagttgttctctcttctcattggtc 43983008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 46799931 - 46799866
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||||||   |||||||| |||||||||||||| ||||||||  ||| |||| |||||||    
T  46799931 gatatttgaacaatcattttggtacaatttttgggacaaccttgttgttctctattctcattggtc 46799866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 48650283 - 48650328
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 178  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||||    
T  48650283 ttgtacaaaagttttacaaaaatagttgtacaaataacatttctct 48650328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 51107337 - 51107402
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||| ||||||||| ||| |||||||||||| |||| ||||| ||| |||||| | |||||||    
T  51107337 gatattttaacaactttcttgctataatttttggaacaaccttgtcgtgctctcttttcattggtc 51107402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 51107468 - 51107513
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    |||| ||||| ||||||||||||| |||||||||||||||||||||    
T  51107468 ttgtgcaaaaattatacaaaaatgattgtacaaatatcatttctct 51107513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 55609197 - 55609238
Alignment:
Q  138 acaaaagttatacaaaaatgttgtacaaatatcatttctctt 179  Q
    ||||||||| |||||||  |||||||||||||||||||||||    
T  55609197 acaaaagttgtacaaaatggttgtacaaatatcatttctctt 55609238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 4577739 - 4577676
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||||||||||| | || || ||||||||||| ||||||||| |||||| | ||||||    
T  4577739 gatatttgaacaacttttt-gctacaacttttgggacaaccttgttgtgctctcttttcattggt 4577676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 18874966 - 18874994
Alignment:
Q  151 aaaaatgttgtacaaatatcatttctctt 179  Q
    |||||||||||||||||||||||||||||    
T  18874966 aaaaatgttgtacaaatatcatttctctt 18874994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 181
Target Start/End: Complemental strand, 35037653 - 35037605
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttgt 181  Q
    ||||||||||||| ||  |||||| ||||||||||||||||||||||||    
T  35037653 ttgtacaaaagttgtatcaaaatggttgtacaaatatcatttctcttgt 35037605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 36110178 - 36110134
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 177  Q
    |||||||||| || ||||||||| |||||||||||||||||||||    
T  36110178 ttgtacaaaaattgtacaaaaatagttgtacaaatatcatttctc 36110134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 53781864 - 53781908
Alignment:
Q  134 ttgtacaaaagttatacaaaaatgttgtacaaatatcatttctct 178  Q
    ||||| ||||||| |||||||  ||||||||||||||||||||||    
T  53781864 ttgtataaaagttgtacaaaatagttgtacaaatatcatttctct 53781908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 55960744 - 55960700
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 177  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||||    
T  55960744 ttgtacaaaagttataccaaaatggttatacaaatatcatttctc 55960700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 8e-22; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 12257077 - 12257012
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||    
T  12257077 gatatttgaacaacttttttggtacaatttttgggacaaccttgttgtgttttcttcttattggtc 12257012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 5852634 - 5852573
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttatt 63  Q
    ||||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||||    
T  5852634 gatatttgaacaactcttttggtaaaacttttgggacaaccttgttgtgttctcttcttatt 5852573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 11152594 - 11152659
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| |||||||||| |  |||||||||||||||||||||||||||| |||||||||    
T  11152594 gatatttgaacaaattttttggtacagcttttgggacaatcttgttgtgttctctttttattggtc 11152659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 16463468 - 16463403
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| || ||||| || ||||||||||||||||||||| ||||||||||||||||    
T  16463468 gatatttgaacaactcttatggtacaacttttgggacaatcttgttgtgctctcttcttattggtc 16463403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 18749258 - 18749323
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||||| |||||||| |||||||||    
T  18749258 gatatttgaacaaattttttggtataatttttaggacaaccttgttgcgttctctttttattggtc 18749323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 28679303 - 28679239
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||||||| |||||||| || ||||||||||| |||||||| ||||||||||||||||    
T  28679303 gatatttgaacaactcttttggtacaacttttgggacaaccttgttgtattctcttcttattggt 28679239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 35798383 - 35798321
Alignment:
Q  4 tatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||| | |||| ||||||||    
T  35798383 tatttgaacaacttttttgttataatttttgggacaaccttgttgtgctttctttttattggt 35798321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 1096238 - 1096303
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| || || |||| ||||||| |||||||||||||||||||||||||    
T  1096238 gatatttgaacaactcttttgatacaacttttaggacaattttgttgtgttctcttcttattggtc 1096303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 26387726 - 26387791
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| || || ||||||||||| ||||||||||||| ||||||||||||    
T  26387726 gatatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttcttttcttattggtc 26387791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 34141619 - 34141554
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || |||||| ||||  |||||||||||||||||||||||||    
T  34141619 gatatttgaacaactcttttggtacaacttttggaacaactttgttgtgttctcttcttattggtc 34141554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 35705812 - 35705877
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||| |||||| | |||||||    
T  35705812 gatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctcttttcattggtc 35705877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 38598245 - 38598309
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||| | ||||| ||||| ||||| ||||||||||||||||||||||||||    
T  38598245 gatatttgaacaactttttag-tataacttttgtgacaaccttgttgtgttctcttcttattggtc 38598309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 44897800 - 44897737
Alignment:
Q  4 tatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| ||||| || || ||||||||||| |||||||||||||||| |||||||||    
T  44897800 tatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctctttttattggtc 44897737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 19637273 - 19637227
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 179  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  19637273 ttgtacaaaagttatacaaaaatggttgtacaaatatcatttctctt 19637227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 19835866 - 19835820
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 179  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  19835866 ttgtacaaaagttatacaaaaatggttgtacaaatatcatttctctt 19835820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 8757720 - 8757655
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || |||||| |||| ||||||||  ||||||||||||||||    
T  8757720 gatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtc 8757655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 12256945 - 12256900
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  12256945 ttgtacaaaagttatacaaaaatgattgtacaaatatcatttctct 12256900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 23141530 - 23141465
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || ||||||||||| ||||||||  |||||||| |||||||    
T  23141530 gatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtc 23141465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 23553320 - 23553255
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || ||||||||||| ||||||||  |||||||| |||||||    
T  23553320 gatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtc 23553255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 30340170 - 30340105
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || ||||||||||| ||||||||  |||||||| |||||||    
T  30340170 gatatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtc 30340105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 38027510 - 38027575
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||| ||||||| |||| |||||| |||||  |||| ||||||||||||||||||||||||||    
T  38027510 gatatttaaacaactcttttagtataacttttgaaacaaccttgttgtgttctcttcttattggtc 38027575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 57
Target Start/End: Complemental strand, 40115691 - 40115636
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctctt 57  Q
    ||||||||||||||||||||  || |||||||||||||| ||||||||| ||||||    
T  40115691 gatatttgaacaacttttttactacaatttttgggacaaccttgttgtgctctctt 40115636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 45202027 - 45202082
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctctt 57  Q
    ||||||||||||||||||||| || || ||||||||||| ||||||||| ||||||    
T  45202027 gatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctctt 45202082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 17999917 - 17999855
Alignment:
Q  5 atttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||| | |||| | |||||||    
T  17999917 atttgaacaacttttttgctataacttttgggacaaccttgttgtgatatcttttcattggtc 17999855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 30340037 - 30339991
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  30340037 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 30339991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 34141486 - 34141440
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  34141486 ttgtacaaaagttgtacaaaaatgattgtacaaatatcatttctctt 34141440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 11828715 - 11828780
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || |||| |||||| ||||||||| |||||| | |||||||    
T  11828715 gatatttgaacaacttttttgctacaacttttaggacaaccttgttgtgctctcttttcattggtc 11828780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 35007996 - 35008061
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||  || || ||||||||||| ||||||||| |||||| | |||||||    
T  35007996 gatatttgaacaacttttttactacaacttttgggacaaccttgttgtgctctcttttcattggtc 35008061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 35203644 - 35203709
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| ||||||| || |||||||||||||| ||||||||| | |||| | |||||||    
T  35203644 gatatttgaacaatttttttgctacaatttttgggacaaccttgttgtgctatcttttcattggtc 35203709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 35518451 - 35518386
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| || || |||||||||||  |||||||  ||||||||||||||||    
T  35518451 gatatttgaacaactattttgatacaacttttgggacaactttgttgttctctcttcttattggtc 35518386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 38778067 - 38778014
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctc 55  Q
    |||||||||| |||||||||| ||||| ||||||||||| ||||||||| ||||    
T  38778067 gatatttgaataacttttttgctataacttttgggacaaccttgttgtgctctc 38778014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 41156898 - 41156963
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| ||||||| || || |||||||||||| |||||||| |||||| | |||||||    
T  41156898 gatatttgaacaatttttttgctacaacttttgggacaattttgttgtgctctcttttcattggtc 41156963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 5852518 - 5852474
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  5852518 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 5852474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 11126507 - 11126463
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||    
T  11126507 ttgtacaaaagttatgcaaaaatggttgtacaaatatcatttctc 11126463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 18749390 - 18749434
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  18749390 ttgtacaaaaattatacaaaaatggttgtacaaatatcatttctc 18749434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 22296025 - 22296089
Alignment:
Q  3 atatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||||||||||||  || |||||||||||||| ||||||||| ||| || | |||||||    
T  22296025 atatttgaacaactttttttctacaatttttgggacaaccttgttgtgctcttttttcattggtc 22296089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 12208483 - 12208440
Alignment:
Q  137 tacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  12208483 tacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 12208440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 43205267 - 43205204
Alignment:
Q  4 tatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||| || || |||||||||||  |||||||| |||||| | |||||||    
T  43205267 tatttgaacaacttttttgctacaacttttgggacaactttgttgtgctctcttttcattggtc 43205204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 178
Target Start/End: Complemental strand, 3839451 - 3839409
Alignment:
Q  137 tacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  3839451 tacaaaagttataccaaaatggttgtacaaatatcatttctct 3839409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 27529573 - 27529527
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 179  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  27529573 ttgtacaaaagttgtacaaaaatggttctacaaatatcatttctctt 27529527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 11152726 - 11152771
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    |||||||||| ||||| ||||||| |||||||||||||||||||||    
T  11152726 ttgtacaaaaattatataaaaatgattgtacaaatatcatttctct 11152771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 28679172 - 28679131
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcattt 174  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  28679172 ttgtacaaaagttgtacaaaaatgattgtacaaatatcattt 28679131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 179
Target Start/End: Original strand, 4263897 - 4263925
Alignment:
Q  151 aaaaatgttgtacaaatatcatttctctt 179  Q
    |||||||||||||||||||||||||||||    
T  4263897 aaaaatgttgtacaaatatcatttctctt 4263925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 6328711 - 6328667
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    |||||||||| |||||| |||||| ||||||||||||||||||||    
T  6328711 ttgtacaaaaattataccaaaatggttgtacaaatatcatttctc 6328667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 24491572 - 24491636
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||||| | ||||| || || ||||| ||||||||| ||||  |||||||||||||||    
T  24491572 gatatttgaacaattcttttgatacaacttttgagacaatcttattgttctctcttcttattggt 24491636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 24766192 - 24766148
Alignment:
Q  138 acaaaagttatacaaaaatg-ttgtacaaatatcatttctcttgt 181  Q
    |||||||||||  ||||||| ||||||||||||||||||||||||    
T  24766192 acaaaagttattaaaaaatggttgtacaaatatcatttctcttgt 24766148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 27538828 - 27538892
Alignment:
Q  3 atatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||||||||||||| || || ||| ||||||| ||||||||| | |||| | |||||||    
T  27538828 atatttgaacaacttttttgctacaactttcgggacaaccttgttgtgctttcttttcattggtc 27538892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 35203776 - 35203820
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||    
T  35203776 ttgtacaaaagttgaacaaaaatggttgtacaaatatcatttctc 35203820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 44897670 - 44897626
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    |||||| |||||| |||||||||| ||||||||||||||||||||    
T  44897670 ttgtacgaaagttgtacaaaaatggttgtacaaatatcatttctc 44897626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 1742 - 1807
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || |||||||||||||||||| |||||||||||||||||||    
T  1742 gatatttgaacaactcttttggtacaacttttgggacaatcttgttatgttctcttcttattggtc 1807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 1872 - 1916
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 177  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  1872 ttgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 1916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 145223 - 145158
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  145223 gatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtc 145158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 145105 - 145060
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||    
T  145105 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctct 145060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 25430822 - 25430757
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  25430822 gatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtc 25430757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 28713269 - 28713204
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  28713269 gatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtc 28713204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 28720616 - 28720551
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  28720616 gatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtc 28720551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 28728258 - 28728193
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  28728258 gatatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtc 28728193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 18550155 - 18550093
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattg 64  Q
    ||||||||||||||| |||||||| || ||||||||||| |||||||||||||||||||||||    
T  18550155 gatatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctcttcttattg 18550093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 27300522 - 27300457
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||| |||| || |||||||||||||||||||| |||||||||||||||||    
T  27300522 gatatttgaacaactctttcggtacaacttttgggacaatcttgttgtattctcttcttattggtc 27300457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 34838165 - 34838230
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || |||| |||||| ||||||||||||||||||||||||||    
T  34838165 gatatttgaacaactcttttggtacaacttttaggacaaccttgttgtgttctcttcttattggtc 34838230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 1646432 - 1646367
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||||| |||||| | |||||||    
T  1646432 gatatttgaacaacttttttgctataatttttggaacaatcttattgtgctctcttttcattggtc 1646367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 21649065 - 21649130
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || ||||||||||| ||||||||| |||||| |||||||||    
T  21649065 gatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctctttttattggtc 21649130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 33692897 - 33692832
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||| |||||| | |||||||    
T  33692897 gatatttgaacaacttttttgttataatttttgggacaactttgttgtgctctcttttcattggtc 33692832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 35701742 - 35701803
Alignment:
Q  6 tttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||| | |||||||| || |||||||||||||||||| |||||||||||||||||||    
T  35701742 tttgaacaattcttttggtacaacttttgggacaatcttgttatgttctcttcttattggtc 35701803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 37471819 - 37471754
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||| |||||| | |||||||    
T  37471819 gatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctcttttcattggtc 37471754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 34578232 - 34578294
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattg 64  Q
    ||||||| ||||||| |||||||||||||||||||||||  |||||||  |||||||||||||    
T  34578232 gatattttaacaactattttggtataatttttgggacaactttgttgttctctcttcttattg 34578294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 4148550 - 4148615
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||| ||| |||||||| || ||||||||||| ||| |||||||| |||||||||||||    
T  4148550 gatatttgaacgactcttttggtacaacttttgggacaaccttattgtgttcccttcttattggtc 4148615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 18550023 - 18549978
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    |||||||||||||||||||||||| |||||||||||||||||||||    
T  18550023 ttgtacaaaagttatacaaaaatgattgtacaaatatcatttctct 18549978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 22203110 - 22203175
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || ||||||||||| ||||||||| |||||| | |||||||    
T  22203110 gatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttgattggtc 22203175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 22836034 - 22836099
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || ||||||||||| || ||||||||| |||||| | |||||||    
T  22836034 gatatttgaacaacttttttgctacaatttttgggataaccttgttgtgctctcttttcattggtc 22836099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 23709020 - 23708975
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 178  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  23709020 ttgtacaaaagttatacaaaaatggttgtacaaatatcatttctct 23708975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 41776351 - 41776286
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || ||||||||||| ||||||||| |||||| | |||||||    
T  41776351 gatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtc 41776286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 13924184 - 13924121
Alignment:
Q  3 atatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    |||||||||||||| |||||||| || ||||| ||||||||||||||  |||||||| ||||||    
T  13924184 atatttgaacaactcttttggtacaacttttgtgacaatcttgttgtcctctcttctcattggt 13924121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 23709150 - 23709087
Alignment:
Q  4 tatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||| || |||||||||||||| |||||| || |||||| | |||||||    
T  23709150 tatttgaacaacttttttgctacaatttttgggacaaccttgttatgctctcttttcattggtc 23709087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 40570684 - 40570641
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttg 45  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||    
T  40570684 gatatttgaacaacttttttgttataatttttgggacgatcttg 40570641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 22203242 - 22203288
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  22203242 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 22203288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 28713137 - 28713091
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  28713137 ttgtataaaagttatacaaaaatggttgtacaaatatcatttctctt 28713091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 28720484 - 28720438
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  28720484 ttgtataaaagttatacaaaaatggttgtacaaatatcatttctctt 28720438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 28728126 - 28728080
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  28728126 ttgtataaaagttatacaaaaatggttgtacaaatatcatttctctt 28728080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 32674259 - 32674305
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  32674259 ttgtacaaaagttataccaaaatggttgtacaaatatcatttctctt 32674305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 35701854 - 35701900
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  35701854 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 35701900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 23265248 - 23265313
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||| ||||||||||||| || || ||||| |||||| |||||||| |||||| |||||||||    
T  23265248 gatatttaaacaacttttttgttacaacttttgcgacaattttgttgtgctctctttttattggtc 23265313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 37784401 - 37784446
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  37784401 ttgtacaaaagttataccaaaatggttgtacaaatatcatttctct 37784446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 43590870 - 43590805
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||  ||||||||||| |||||| || ||||| |||||| | |||||||    
T  43590870 gatatttgaacaacttttttactataatttttgagacaattttattgtgctctcttttcattggtc 43590805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 10591900 - 10591944
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 177  Q
    |||||||||||||||| |||||| |||||||||||||||||||||    
T  10591900 ttgtacaaaagttatataaaaatagttgtacaaatatcatttctc 10591944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 21649195 - 21649239
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  21649195 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 21649239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 27300390 - 27300346
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  27300390 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 27300346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 42651096 - 42651032
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||||||| |||||||| || ||||| ||||| ||||||||  |||||||| ||||||    
T  42651096 gatatttgaacaactattttggtacaacttttgagacaaccttgttgttctctcttctcattggt 42651032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 4148682 - 4148728
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 179  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||    
T  4148682 ttgtacaaaagttgtacaaaaatggttatacaaatatcatttctctt 4148728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 5742684 - 5742729
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||    
T  5742684 ttgtacaaaagttgtaccaaaatggttgtacaaatatcatttctct 5742729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 34578404 - 34578449
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||    
T  34578404 ttgttcaaaagttgtacaaaaatggttgtacaaatatcatttctct 34578449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 177
Target Start/End: Complemental strand, 42688468 - 42688427
Alignment:
Q  137 tacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    ||||||||||||||||||||| |||||||||||||| |||||    
T  42688468 tacaaaagttatacaaaaatgattgtacaaatatcaattctc 42688427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 40459789 - 40459833
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctc 177  Q
    ||||||||||||||||| ||||| ||||||||||| |||||||||    
T  40459789 ttgtacaaaagttataccaaaatagttgtacaaatttcatttctc 40459833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 37821036 - 37821101
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  37821036 gatatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctcttcttattggtc 37821101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 39032499 - 39032564
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||||||||||    
T  39032499 gatatttgaacaactcttttgatacaatttttgggacaaccttgttgtgttctcttcttattggtc 39032564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 6458943 - 6458878
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||| | |||||||    
T  6458943 gatatttgaacaacttttttgctataatttttgggacaaccttgttgtgctctcttttaattggtc 6458878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 21771368 - 21771433
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||| |||||||||    
T  21771368 gatatttgaacaactcttttggtataacttttgggacaaccttgttgtgttatctttttattggtc 21771433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 35616696 - 35616761
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||||||  ||||||||||||||||    
T  35616696 gatatttgaacaactattttggtataaattttgggacaaccttgttgttctctcttcttattggtc 35616761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 18729173 - 18729237
Alignment:
Q  3 atatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||||||| |||||||| || ||||||||||| |||||||||||||||| |||||||||    
T  18729173 atatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctctttttattggtc 18729237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 8442335 - 8442270
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||||||||||||| ||||| |||||||  |||||||| |||||||    
T  8442335 gatatttgaacaactattttggtataatttttggaacaattttgttgttctctcttctcattggtc 8442270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 14126590 - 14126525
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| |  ||||||||||| |||| |||||||||||||||||||||    
T  14126590 gatatttgaacaactcttttggtagagcttttgggacaaccttgatgtgttctcttcttattggtc 14126525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 35595881 - 35595946
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||  || |||||||||||||||||||||||| ||| || | |||||||    
T  35595881 gatatttgaacaacttttttattacaatttttgggacaatcttgttgtgctcttttttcattggtc 35595946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 36899376 - 36899437
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttatt 63  Q
    ||||||||||||||| |||||||| || |||||| ||||||||||| ||||||||| |||||    
T  36899376 gatatttgaacaactattttggtacaacttttggaacaatcttgttttgttctctttttatt 36899437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 12203320 - 12203257
Alignment:
Q  3 atatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    |||||||||||||| |||||||| || ||||| ||||||||||||||  |||||||| ||||||    
T  12203320 atatttgaacaactcttttggtacaacttttgtgacaatcttgttgtcctctcttctcattggt 12203257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 14522861 - 14522924
Alignment:
Q  4 tatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||| || || ||||||||||||||| ||||| | |||| |||||||||    
T  14522861 tatttgaacaacttttttgctacaacttttgggacaatcttattgtgctatctttttattggtc 14522924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 3031878 - 3031832
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  3031878 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 3031832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 18729316 - 18729362
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  18729316 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 18729362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 20985556 - 20985602
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  20985556 ttgtacaaaaattatacaaaaatggttgtacaaatatcatttctctt 20985602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 34693243 - 34693289
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  34693243 ttgtacaaaaattatacaaaaatgattgtacaaatatcatttctctt 34693289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 39032631 - 39032677
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||    
T  39032631 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctctt 39032677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 12612912 - 12612977
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||  |||||||| || ||||||||||| ||||||||  |||||||| |||||||    
T  12612912 gatatttgaacaaccattttggtacaacttttgggacaaccttgttgttctctcttctcattggtc 12612977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 22864274 - 22864335
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttatt 63  Q
    ||||||||||||||| ||||| |||||||||||||||||  |||||||  |||||| |||||    
T  22864274 gatatttgaacaactattttgttataatttttgggacaacgttgttgttctctctttttatt 22864335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 25585483 - 25585528
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||    
T  25585483 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctct 25585528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 34693111 - 34693176
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||| |||| ||||| || || |||| ||| || ||||||||||||||||||||||||||    
T  34693111 gatatttgaataactcttttgatacaacttttaggataaccttgttgtgttctcttcttattggtc 34693176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 38920022 - 38919957
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || |||| |||||| ||||||||  |||||||| |||||||    
T  38920022 gatatttgaacaactcttttggtacaacttttaggacaaccttgttgttctctcttctcattggtc 38919957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 181
Target Start/End: Original strand, 14522991 - 14523039
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttgt 181  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||||||    
T  14522991 ttgtaaaaaagttgtacaaaaatggttgtacaaatatcatttctcttgt 14523039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 17574119 - 17574166
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgt 49  Q
    ||||||||||||||| |||||||| || ||||||||||| ||||||||    
T  17574119 gatatttgaacaactattttggtacaacttttgggacaaccttgttgt 17574166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 180
Target Start/End: Complemental strand, 29765874 - 29765827
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttg 180  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  29765874 ttgtacaaaagttgtactaaaatggttgtacaaatatcatttctcttg 29765827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 30103348 - 30103395
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgt 49  Q
    ||||||||||||||| ||||   |||||||||||||||||||||||||    
T  30103348 gatatttgaacaactattttaaaataatttttgggacaatcttgttgt 30103395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 176
Target Start/End: Original strand, 30103478 - 30103521
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttct 176  Q
    |||||||||| ||||||||||||| |||||||||||||||||||    
T  30103478 ttgtacaaaaattatacaaaaatgattgtacaaatatcatttct 30103521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 12891123 - 12891169
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||    
T  12891123 ttgtacaaaagttgtgcaaaaatggttgtacaaatatcatttctctt 12891169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 19844340 - 19844390
Alignment:
Q  138 acaaaagttatacaaaaat-gttgtacaaatatcatttctcttgtgaatat 187  Q
    |||||||||||  |||||| ||||||||||||||||||||||| |||||||    
T  19844340 acaaaagttatcaaaaaatagttgtacaaatatcatttctcttttgaatat 19844390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 31626103 - 31626149
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    |||||||||| |||||| |||||| ||||||||||||||||||||||    
T  31626103 ttgtacaaaaattataccaaaatgattgtacaaatatcatttctctt 31626149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 42364605 - 42364540
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||   | || ||||||||||| ||||||||||| |||| | |||||||    
T  42364605 gatatttgaacaacttttttccaacaacttttgggacaaccttgttgtgttatcttttcattggtc 42364540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 35579026 - 35578970
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttc 58  Q
    ||||||||||||| | |||||||||||||||||||| ||| || ||||  |||||||    
T  35579026 gatatttgaacaattattttggtataatttttgggataattttattgttctctcttc 35578970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 14838940 - 14839005
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||||||||    
T  14838940 gatatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctctttttattggtc 14839005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 32152069 - 32152005
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    |||||||||||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||    
T  32152069 gatatttgaacaacttttttggtacaatttttaggacaactttgttgtgttctcttcttattggt 32152005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 29555736 - 29555797
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttatt 63  Q
    ||||||||||||||| |||||||| || ||||||||||| ||||||||||||||||||||||    
T  29555736 gatatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttatt 29555797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 30664677 - 30664612
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||| ||||||||||||| || |||||| ||||| ||||||||||||||| |||||||||    
T  30664677 gatatttgaataacttttttggtacaacttttggaacaattttgttgtgttctctttttattggtc 30664612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 42888668 - 42888732
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||| ||||||||||| |||||||||    
T  42888668 gatatttgaacaacttttttgttataatttttggg-caaccttgctgtgttctctttttattggtc 42888732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 43894880 - 43894945
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||||| |||||| | |||||||    
T  43894880 gatatttgaacaacttttttgctataatttttgggacaactttgttgtgctctcttttcattggtc 43894945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 50745725 - 50745660
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||| |||||| | |||||||    
T  50745725 gatatttgaacaatttttttgctataatttttgggacaaccttgttgtgctctcttttcattggtc 50745660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 55264993 - 55264928
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| ||||||| |||||||||||||||||  || |||| |||||||||||||||||    
T  55264993 gatatttgaacaatttttttgatataatttttgggacaactttattgtattctcttcttattggtc 55264928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 884713 - 884651
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattg 64  Q
    ||||||| ||||||| ||||||||||||||||| || ||| ||||||| ||||||||||||||    
T  884713 gatattttaacaactattttggtataatttttgagagaattttgttgttttctcttcttattg 884651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 9027789 - 9027724
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || |||||| |||| ||||||||  ||||||||||||||||    
T  9027789 gatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtc 9027724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 43149238 - 43149303
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || |||||| |||| ||||||||  ||||||||||||||||    
T  43149238 gatatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtc 43149303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 43220037 - 43220102
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||||||||||||| |||||| |||||||||||| |||||||  ||| |||| |||||||    
T  43220037 gatatttgaacaacttttttagtataacttttgggacaattttgttgttctctattctcattggtc 43220102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 44689979 - 44689914
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| | |||||| | || ||||||||||| |||||||||||||||| |||||||||    
T  44689979 gatatttgaacaattcttttggaacaacttttgggacaaccttgttgtgttctctttttattggtc 44689914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 48117512 - 48117447
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || ||||||||||| ||||||||| |||||| | |||||||    
T  48117512 gatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtc 48117447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 33972059 - 33971995
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||||||| |||||||| |||||||| ||||| ||||||||  |||||||| ||||||    
T  33972059 gatatttgaacaactattttggtacaatttttgagacaaccttgttgttctctcttctcattggt 33971995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 35368787 - 35368723
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    |||||||||||||||| |||| || || ||||||||||||||||||||| |||||| | ||||||    
T  35368787 gatatttgaacaacttgtttgctacaacttttgggacaatcttgttgtgctctcttttcattggt 35368723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 29846786 - 29846841
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctctt 57  Q
    ||||||||||||||||||||| || || ||||||||||| ||||||||| ||||||    
T  29846786 gatatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctctt 29846841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 45517687 - 45517730
Alignment:
Q  137 tacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  45517687 tacaaaagttatacaaaaatggttgtacaaatatcatttctctt 45517730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 26280684 - 26280730
Alignment:
Q  3 atatttgaacaacttttttggtataatttttgggacaatcttgttgt 49  Q
    |||||||||||| | |||||||||||||||||||| |||||||||||    
T  26280684 atatttgaacaattattttggtataatttttgggataatcttgttgt 26280730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 27276910 - 27276848
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattg 64  Q
    ||||||||||||||| |||||||| |||||||| ||||| |||||||| |||| || ||||||    
T  27276910 gatatttgaacaactattttggtacaatttttgagacaaccttgttgttttctttttttattg 27276848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 29555865 - 29555911
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctctt 179  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  29555865 ttgtacaaaagttatacaaaaatggttgtacaaatattatttctctt 29555911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 41112105 - 41112143
Alignment:
Q  140 aaaagttatacaaaaatgttgtacaaatatcatttctct 178  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  41112105 aaaagttgtacaaaaatgttgtacaaatatcatttctct 41112143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 7351537 - 7351598
Alignment:
Q  6 tttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||||  ||||  |||| |||||||| || ||||||||||||||||||||||||||    
T  7351537 tttgaacaactcatttgaaataacttttgggaaaaccttgttgtgttctcttcttattggtc 7351598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 7351665 - 7351710
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  7351665 ttgtacaaaaattatacaaaaatggttgtacaaatatcatttctct 7351710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 9158936 - 9158996
Alignment:
Q  7 ttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    |||||||||||||||| || || ||||||||||| ||||||||| |||||| | |||||||    
T  9158936 ttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtc 9158996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 14839072 - 14839116
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  14839072 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 14839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 29057824 - 29057760
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||||| ||||||| || || ||||||||||| ||||||||| |||||| | ||||||    
T  29057824 gatatttgaacaatttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggt 29057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 30664547 - 30664503
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||    
T  30664547 ttgtacaaaagttgtacaaaaatgattgtacaaatatcatttctc 30664503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 48205089 - 48205045
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||    
T  48205089 ttgtacaaaaattatacaaaaatgattgtacaaatatcatttctc 48205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 55264861 - 55264817
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||    
T  55264861 ttgtataaaagttatacaaaaatggttgtacaaatatcatttctc 55264817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 31763983 - 31763936
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgt 49  Q
    ||||||| ||||||| |||||||| ||||||||||||||| |||||||    
T  31763983 gatatttaaacaactattttggtacaatttttgggacaattttgttgt 31763936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 40821755 - 40821810
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctctt 57  Q
    ||||||||||||||||||||  || || ||||||||||| ||||||||| ||||||    
T  40821755 gatatttgaacaacttttttactacaacttttgggacaaccttgttgtgctctctt 40821810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 44689836 - 44689793
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttct 176  Q
    ||||||||||||| |||||||||| |||||||||||||||||||    
T  44689836 ttgtacaaaagttgtacaaaaatggttgtacaaatatcatttct 44689793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 9159063 - 9159109
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    |||||||||| || |||||||||| ||||||||||||||||||||||    
T  9159063 ttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctctt 9159109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 11404849 - 11404887
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaa 40  Q
    ||||||||||||||| |||||||| ||||||||||||||    
T  11404849 gatatttgaacaactattttggtacaatttttgggacaa 11404887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 50025725 - 50025771
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    |||||||||| |||||| |||||| ||||||||||||||||||||||    
T  50025725 ttgtacaaaatttataccaaaatggttgtacaaatatcatttctctt 50025771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 2280221 - 2280176
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||||    
T  2280221 ttgtacaaaagttgtactaaaatggttgtacaaatatcatttctct 2280176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 179
Target Start/End: Complemental strand, 16479671 - 16479630
Alignment:
Q  138 acaaaagttatacaaaaatgttgtacaaatatcatttctctt 179  Q
    ||||||||| |||||||  |||||||||||||||||||||||    
T  16479671 acaaaagttgtacaaaatggttgtacaaatatcatttctctt 16479630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 17118441 - 17118400
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcattt 174  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  17118441 ttgtacaaaagttgtacaaaaatggttgtacaaatatcattt 17118400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 38296557 - 38296622
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||| |||||||||| |||||| |||| | |  || |||||||||||||    
T  38296557 gatatttgaacaactcttttgttataattttttggacaaccttgatattctcccttcttattggtc 38296622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 42888799 - 42888844
Alignment:
Q  134 ttgtacaaaagttatacaaaaat-gttgtacaaatatcatttctct 178  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||    
T  42888799 ttgtacaaaagttgtacaaaaatggctgtacaaatatcatttctct 42888844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 181
Target Start/End: Complemental strand, 288765 - 288721
Alignment:
Q  138 acaaaagttatacaaaaat-gttgtacaaatatcatttctcttgt 181  Q
    |||||||||||| |||||| ||||| |||||||||||||||||||    
T  288765 acaaaagttataaaaaaattgttgttcaaatatcatttctcttgt 288721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 44827129 - 44827081
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtg 50  Q
    ||||||||||||||||||||| || || |||| |||||| |||||||||    
T  44827129 gatatttgaacaacttttttgctacaacttttaggacaaccttgttgtg 44827081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 47141627 - 47141671
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    |||||||||| |||||| |||||| ||||||||||||||||||||    
T  47141627 ttgtacaaaaattataccaaaatggttgtacaaatatcatttctc 47141671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 49361857 - 49361897
Alignment:
Q  140 aaaagttatacaaaaatg-ttgtacaaatatcatttctctt 179  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  49361857 aaaagttgtacaaaaatgattgtacaaatatcatttctctt 49361897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 52381223 - 52381179
Alignment:
Q  137 tacaaaagttatacaaaaatg-ttgtacaaatatcatttctcttg 180  Q
    |||||||||||||| |||||| |||||||||||||||||| ||||    
T  52381223 tacaaaagttataccaaaatggttgtacaaatatcatttcgcttg 52381179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 151 - 179
Target Start/End: Complemental strand, 53715365 - 53715337
Alignment:
Q  151 aaaaatgttgtacaaatatcatttctctt 179  Q
    |||||||||||||||||||||||||||||    
T  53715365 aaaaatgttgtacaaatatcatttctctt 53715337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 54233495 - 54233539
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    ||||||||||||| || ||||||| ||||||||||||||||||||    
T  54233495 ttgtacaaaagttgtaaaaaaatggttgtacaaatatcatttctc 54233539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 48830 - 48765
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| | ||||| || |||||||||||||| ||||||||||||||||||||||||||    
T  48830 gatatttgaacaattcttttgatacaatttttgggacaaccttgttgtgttctcttcttattggtc 48765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 34792182 - 34792117
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| || |||||||||    
T  34792182 gatatttgaacaactcttttggtataacttttgggacaaccttgttgtgttctttttttattggtc 34792117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 9395232 - 9395297
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||| |||||| | |||||||    
T  9395232 gatatttgaacaacttttttgctacaacttttgggacaatcttgttgtgctctcttatcattggtc 9395297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 16121328 - 16121263
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||| | |||| |||||||||    
T  16121328 gatatttgaacaacttttttgctataacttttgggacaattttgttgtgctatctttttattggtc 16121263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 17442994 - 17442936
Alignment:
Q  6 tttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattg 64  Q
    ||||||||||| |||||||| || ||||||||||| ||| |||||||||||||||||||    
T  17442994 tttgaacaactcttttggtacaacttttgggacaaccttattgtgttctcttcttattg 17442936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 32135332 - 32135397
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || |||| |||||||||||||||| |||||| | |||||||    
T  32135332 gatatttgaacaacttttttgctacaacttttaggacaatcttgttgtgctctcttttcattggtc 32135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 608556 - 608621
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||| |||||||| || | ||||||||| ||||||||  |||||||| |||||||    
T  608556 gatatttgaacaactattttggtacaactgttgggacaaccttgttgttctctcttctcattggtc 608621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 6997445 - 6997510
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||| ||||||| || || ||||||||||| ||||||||| |||||| | |||||||    
T  6997445 gatatttgaacaatttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtc 6997510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 10557585 - 10557520
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||||||||||||| || || |||||| |||||||||||||  |||||| | |||||||    
T  10557585 gatatttgaacaacttttttgctacaacttttggaacaatcttgttgtactctcttttcattggtc 10557520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 34792066 - 34792021
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctct 178  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||    
T  34792066 ttgtacaaaagttgtacaaaaatgattgtacaaatatcatttctct 34792021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 6997579 - 6997621
Alignment:
Q  136 gtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    |||||||| ||||||||||||| ||||||||||||||||||||    
T  6997579 gtacaaaaattatacaaaaatggttgtacaaatatcatttctc 6997621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 27790158 - 27790195
Alignment:
Q  30 ttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  27790158 ttttgggacaaccttgttgtgttctctttttattggtc 27790195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 19713170 - 19713106
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggt 66  Q
    ||||||||||||||||||||   | || ||||||||||| ||||||||| |||||| | ||||||    
T  19713170 gatatttgaacaacttttttacaacaacttttgggacaaccttgttgtgctctcttttcattggt 19713106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 27790262 - 27790306
Alignment:
Q  134 ttgtacaaaagttatacaaaaatg-ttgtacaaatatcatttctc 177  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||    
T  27790262 ttgtataaaagttgtacaaaaatggttgtacaaatatcatttctc 27790306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 3119 - 3054
Alignment:
Q  2 gatatttgaacaacttttttggtataatttttgggacaatcttgttgtgttctcttcttattggtc 67  Q
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T  3119 gatatttgaacaacttttttgctacaacttttgggacaactttattgtgctctcttttcattggtc 3054  T

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