View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17318_low_21 (Length: 388)
Name: NF17318_low_21
Description: NF17318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17318_low_21 |
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Alignment Details
Target: chr2 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 11 - 369
Target Start/End: Complemental strand, 364790 - 364432
Alignment:
| Q |
11 |
cacagagttgaagtttcatatcctggagccaaagaaattgaattgataaataaacaatggattcaatccaacacaaacaagaaatttaaagggtgcaatc |
110 |
Q |
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| T |
364790 |
cacagagttgaagtttcatatcctggagccaaagaaattgaattgataaataaacaatggattcaatccaacacaaacaagaaatttaaagggtgcaatc |
364691 |
T |
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| Q |
111 |
aataataccttgagtttggcaagtttgtattgcaaataagctgaatagggtacaagaataatacaacagataactaactgcnnnnnnnnnnnnttagaaa |
210 |
Q |
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| T |
364690 |
agtaataccttgagtttggcaagtttgtattgtaaataagctgaatagggtacaagaataatacaacagataactaactgcaaaaaataaaaattagaaa |
364591 |
T |
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| Q |
211 |
tgactgaaaatgaagtatgaacattataagttaatagagtgaaaactgaaaaagtgtaaaagtaataaactaacaagatagaagatgggagaggagatag |
310 |
Q |
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| T |
364590 |
tgattgaaaatgaagtatgaacattataagttaatagagtgaaaactgaaaaagtgtaaaagtaataaactaacaagatagaagatgggagaggaggtag |
364491 |
T |
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| Q |
311 |
agtgttgttgttgttgtttggtgatggaggaagaggaaggttgtggaagaagtgaggag |
369 |
Q |
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| T |
364490 |
agtgttgttgttgttgtttggtgatggaggaagaggaaggttgtggaagaagtgaggag |
364432 |
T |
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