View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17318_low_32 (Length: 334)
Name: NF17318_low_32
Description: NF17318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17318_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 19469097 - 19468779
Alignment:
| Q |
1 |
aaagtatcaacaatgttgtttccagttgatgttagaaaaatggttgttcctgaacttcaaaatgggtttgcaggtaatgcattggttccaggtttcgcaa |
100 |
Q |
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| T |
19469097 |
aaagtatcaacaatgttgtttccagttgatgttagaaaaatggttgttcctgaacttcaaaatgggtttgcaggtaatgcattggttccgggtttcgcaa |
19468998 |
T |
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| Q |
101 |
gagcgactgtgaaggagttgattgaactagaagatgattttcttataaggaaagtgcaagaagggattgaaagattgaatgatgagtatattaaatcagg |
200 |
Q |
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| T |
19468997 |
gagcgactgtgaaggagttgattgaactagaagatgattttcttataaggaaagtgcaagaagggattgaaagattgaatgatgagtatattaaatcagg |
19468898 |
T |
|
| Q |
201 |
tatagattggttagaagtgaatagaggagtgccttgtaaggaagatggtttttctttggtggcatggtggagattagggttagagaatgaagtttttgct |
300 |
Q |
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| T |
19468897 |
tatagattggttagaagtgaatagaggagtgccttgtaaggaagatggtttttctttggtggcatggtggagattagggttagagaatgaagtttttgct |
19468798 |
T |
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| Q |
301 |
tggggtacattgaaatgtg |
319 |
Q |
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||||||||||||||||||| |
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| T |
19468797 |
tggggtacattgaaatgtg |
19468779 |
T |
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