View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17318_low_34 (Length: 320)
Name: NF17318_low_34
Description: NF17318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17318_low_34 |
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Alignment Details
Target: chr8 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 14 - 303
Target Start/End: Complemental strand, 38100617 - 38100328
Alignment:
| Q |
14 |
agatgatgttcggatgaatttggaggtcgttaagcactgtgcaacagtgttgtttctggtgagttataaattaatctccataaatattcaattctgctaa |
113 |
Q |
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| T |
38100617 |
agatgatgttcggatgaatttggaggtcgttaagcactgtgcaacagtgttgtttctggtgagttataaattaatctccataaatattcaattctgctaa |
38100518 |
T |
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| Q |
114 |
ttactaatcacctttgaaaacaaatgaatgattctcaatatttgttatggtttatttggtaatgttaggaatctacactaccaaacacattgcatattga |
213 |
Q |
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| T |
38100517 |
ttactaatcacctttgaaaacaaatgaatgattctcaatatttgttatggtttatttggtaatgttaggaatctacactaccaaacacattgcatattga |
38100418 |
T |
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| Q |
214 |
taaaagcaagtggtatggctcttcaagcattatgacaagaagcagaacaaatgggaaatcaccatgcagagaagagacaagtagaaaatc |
303 |
Q |
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| T |
38100417 |
taaaagcaagtggtatggctcttcaagcattatgacaagaagcagaacaaatgggaaatcaccatgcagagaagagacaagtagaaaatc |
38100328 |
T |
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