View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17318_low_49 (Length: 261)

Name: NF17318_low_49
Description: NF17318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17318_low_49
NF17318_low_49
[»] chr7 (35 HSPs)
chr7 (32-108)||(37856074-37856150)
chr7 (32-108)||(30180609-30180685)
chr7 (32-108)||(48866823-48866899)
chr7 (53-108)||(21752760-21752815)
chr7 (32-108)||(5378729-5378805)
chr7 (32-108)||(37351883-37351959)
chr7 (60-108)||(39875730-39875778)
chr7 (65-108)||(5198686-5198729)
chr7 (75-108)||(42204662-42204695)
chr7 (32-101)||(43445516-43445585)
chr7 (32-108)||(21839026-21839102)
chr7 (32-108)||(44894367-44894443)
chr7 (33-104)||(32933653-32933724)
chr7 (53-108)||(33684782-33684837)
chr7 (77-108)||(41077442-41077473)
chr7 (57-108)||(46651774-46651825)
chr7 (50-108)||(12141986-12142044)
chr7 (50-108)||(21858849-21858907)
chr7 (78-108)||(29034187-29034217)
chr7 (62-108)||(41985027-41985073)
chr7 (75-108)||(2790279-2790312)
chr7 (79-108)||(5978681-5978710)
chr7 (32-108)||(6353830-6353907)
chr7 (79-108)||(18157125-18157154)
chr7 (75-108)||(25887685-25887718)
chr7 (79-108)||(25940607-25940636)
chr7 (79-108)||(27688739-27688768)
chr7 (67-104)||(30862742-30862779)
chr7 (75-104)||(32171059-32171088)
chr7 (75-104)||(34304616-34304645)
chr7 (75-108)||(45607126-45607159)
chr7 (75-108)||(47193029-47193062)
chr7 (76-108)||(8792534-8792566)
chr7 (76-108)||(41254878-41254910)
chr7 (32-108)||(41966430-41966506)
[»] chr4 (36 HSPs)
chr4 (31-104)||(23690337-23690410)
chr4 (32-108)||(38952791-38952867)
chr4 (32-108)||(4896393-4896469)
chr4 (20-108)||(31275248-31275336)
chr4 (32-108)||(55927086-55927162)
chr4 (49-108)||(9162168-9162227)
chr4 (26-104)||(51296064-51296142)
chr4 (32-108)||(42915112-42915188)
chr4 (50-108)||(5234382-5234440)
chr4 (50-108)||(46173639-46173697)
chr4 (32-108)||(47998696-47998771)
chr4 (28-108)||(51389418-51389498)
chr4 (32-108)||(51717177-51717253)
chr4 (33-108)||(24772773-24772848)
chr4 (57-108)||(25523114-25523165)
chr4 (49-108)||(36408114-36408173)
chr4 (49-108)||(36413237-36413296)
chr4 (57-108)||(41609590-41609641)
chr4 (77-108)||(46912000-46912031)
chr4 (32-103)||(47471907-47471978)
chr4 (74-108)||(12074086-12074120)
chr4 (78-108)||(28676093-28676123)
chr4 (62-108)||(31658021-31658067)
chr4 (34-104)||(37249015-37249085)
chr4 (75-108)||(1031857-1031890)
chr4 (79-108)||(12638926-12638955)
chr4 (75-104)||(24337292-24337321)
chr4 (75-108)||(31240750-31240783)
chr4 (79-108)||(32621729-32621758)
chr4 (75-108)||(34974555-34974588)
chr4 (75-108)||(39844194-39844227)
chr4 (79-108)||(46567031-46567060)
chr4 (182-214)||(30546632-30546664)
chr4 (32-108)||(36444288-36444364)
chr4 (48-108)||(37547137-37547197)
chr4 (33-108)||(44166010-44166086)
[»] scaffold0009 (1 HSPs)
scaffold0009 (32-108)||(190778-190854)
[»] chr5 (30 HSPs)
chr5 (32-108)||(28811530-28811606)
chr5 (50-108)||(33567150-33567208)
chr5 (50-108)||(39595376-39595434)
chr5 (27-108)||(4834917-4834998)
chr5 (50-108)||(125194-125252)
chr5 (50-108)||(34381114-34381172)
chr5 (75-108)||(11666281-11666314)
chr5 (75-108)||(19376068-19376101)
chr5 (32-108)||(2117533-2117609)
chr5 (32-108)||(11306798-11306874)
chr5 (56-108)||(12718297-12718349)
chr5 (56-108)||(12779523-12779575)
chr5 (32-104)||(20719908-20719980)
chr5 (61-108)||(5130300-5130347)
chr5 (61-108)||(13613886-13613933)
chr5 (61-108)||(15531813-15531860)
chr5 (61-108)||(21749460-21749507)
chr5 (57-108)||(39458743-39458794)
chr5 (78-108)||(23991333-23991363)
chr5 (62-108)||(33243664-33243710)
chr5 (79-108)||(91317-91346)
chr5 (75-108)||(471916-471949)
chr5 (79-108)||(6865727-6865756)
chr5 (75-108)||(8087901-8087934)
chr5 (79-108)||(9636098-9636127)
chr5 (79-108)||(13734300-13734329)
chr5 (35-104)||(34767313-34767382)
chr5 (79-108)||(36624420-36624449)
chr5 (79-108)||(40566157-40566186)
chr5 (75-108)||(42909821-42909854)
[»] chr3 (42 HSPs)
chr3 (32-104)||(52727341-52727413)
chr3 (32-108)||(41957615-41957691)
chr3 (32-108)||(47849772-47849848)
chr3 (50-108)||(7231917-7231975)
chr3 (50-108)||(11173552-11173610)
chr3 (59-104)||(39540341-39540386)
chr3 (32-108)||(29706005-29706081)
chr3 (44-104)||(34271393-34271453)
chr3 (32-108)||(34733187-34733262)
chr3 (28-108)||(48945949-48946029)
chr3 (32-108)||(49130956-49131032)
chr3 (57-108)||(37302992-37303043)
chr3 (50-108)||(20380800-20380858)
chr3 (50-108)||(46473230-46473288)
chr3 (75-108)||(39604182-39604215)
chr3 (49-108)||(32687869-32687929)
chr3 (57-108)||(33007462-33007514)
chr3 (57-108)||(5188338-5188389)
chr3 (33-108)||(19418054-19418129)
chr3 (77-108)||(37215169-37215200)
chr3 (57-108)||(37303485-37303536)
chr3 (77-108)||(43409303-43409334)
chr3 (78-108)||(8066457-8066487)
chr3 (78-108)||(34628014-34628044)
chr3 (78-108)||(36799500-36799530)
chr3 (78-108)||(41717365-41717395)
chr3 (78-108)||(49457667-49457697)
chr3 (79-108)||(1901866-1901895)
chr3 (79-108)||(1911312-1911341)
chr3 (63-104)||(4209477-4209518)
chr3 (75-108)||(6126556-6126589)
chr3 (75-108)||(14207477-14207510)
chr3 (75-108)||(14215225-14215258)
chr3 (79-108)||(25959482-25959511)
chr3 (75-108)||(28269908-28269941)
chr3 (79-108)||(28300586-28300615)
chr3 (79-108)||(31326810-31326839)
chr3 (75-108)||(35272129-35272162)
chr3 (79-108)||(35554055-35554084)
chr3 (75-108)||(41112008-41112041)
chr3 (59-108)||(48649683-48649732)
chr3 (65-108)||(41877536-41877580)
[»] scaffold0026 (1 HSPs)
scaffold0026 (32-107)||(113728-113803)
[»] chr6 (10 HSPs)
chr6 (33-108)||(32457146-32457221)
chr6 (32-108)||(1897788-1897864)
chr6 (33-108)||(2582764-2582839)
chr6 (32-108)||(32853037-32853113)
chr6 (57-108)||(29383659-29383710)
chr6 (62-107)||(10387740-10387785)
chr6 (32-108)||(2340500-2340576)
chr6 (75-108)||(34021108-34021141)
chr6 (182-214)||(11635617-11635649)
chr6 (76-108)||(25166729-25166761)
[»] chr8 (32 HSPs)
chr8 (32-108)||(5359440-5359516)
chr8 (50-108)||(23258134-23258192)
chr8 (32-108)||(37524321-37524397)
chr8 (49-108)||(22852749-22852808)
chr8 (50-108)||(38128437-38128495)
chr8 (59-108)||(16011837-16011886)
chr8 (32-108)||(44672126-44672202)
chr8 (57-108)||(22767232-22767283)
chr8 (50-108)||(26871146-26871204)
chr8 (50-108)||(28927783-28927841)
chr8 (50-108)||(40413274-40413332)
chr8 (62-108)||(42689887-42689933)
chr8 (75-108)||(426203-426236)
chr8 (75-108)||(896009-896042)
chr8 (35-108)||(28473441-28473514)
chr8 (32-108)||(41344562-41344638)
chr8 (49-108)||(295648-295707)
chr8 (49-108)||(7678834-7678893)
chr8 (78-108)||(24503019-24503049)
chr8 (57-108)||(40604621-40604674)
chr8 (79-108)||(1796585-1796614)
chr8 (59-108)||(3206383-3206432)
chr8 (75-108)||(3989007-3989040)
chr8 (79-108)||(6005046-6005075)
chr8 (75-104)||(26507839-26507868)
chr8 (79-108)||(27631049-27631078)
chr8 (79-108)||(32725722-32725751)
chr8 (75-108)||(37101622-37101655)
chr8 (75-104)||(42996568-42996597)
chr8 (76-108)||(24946104-24946136)
chr8 (48-104)||(27776267-27776323)
chr8 (56-108)||(33817259-33817311)
[»] chr2 (41 HSPs)
chr2 (32-108)||(39454140-39454216)
chr2 (32-108)||(3091843-3091919)
chr2 (28-108)||(6365288-6365368)
chr2 (32-108)||(14140232-14140308)
chr2 (32-108)||(29795538-29795614)
chr2 (32-108)||(34442215-34442291)
chr2 (50-108)||(25801722-25801780)
chr2 (34-108)||(36435783-36435857)
chr2 (32-108)||(14714088-14714164)
chr2 (32-108)||(42081139-42081215)
chr2 (32-108)||(42251813-42251889)
chr2 (57-108)||(1889249-1889300)
chr2 (49-108)||(11164286-11164345)
chr2 (57-108)||(13104581-13104632)
chr2 (57-108)||(32750100-32750151)
chr2 (34-108)||(43650442-43650516)
chr2 (75-108)||(36376787-36376820)
chr2 (59-104)||(40371227-40371272)
chr2 (32-108)||(23344882-23344958)
chr2 (57-108)||(5455371-5455422)
chr2 (57-108)||(7086042-7086093)
chr2 (57-108)||(13711163-13711214)
chr2 (65-108)||(31296769-31296812)
chr2 (77-108)||(34249682-34249713)
chr2 (50-108)||(22390254-22390312)
chr2 (78-108)||(30856909-30856939)
chr2 (75-108)||(5067577-5067610)
chr2 (79-108)||(5167682-5167711)
chr2 (75-108)||(11229257-11229290)
chr2 (79-108)||(19668127-19668156)
chr2 (32-96)||(22195733-22195798)
chr2 (78-107)||(36763459-36763488)
chr2 (75-108)||(37631303-37631336)
chr2 (75-108)||(43725307-43725340)
chr2 (32-108)||(2013178-2013254)
chr2 (56-108)||(3959998-3960050)
chr2 (56-108)||(4263781-4263833)
chr2 (79-107)||(10288255-10288283)
chr2 (32-108)||(12600150-12600226)
chr2 (28-108)||(32128232-32128311)
chr2 (32-108)||(36133076-36133152)
[»] scaffold0057 (1 HSPs)
scaffold0057 (32-104)||(38985-39057)
[»] scaffold0076 (1 HSPs)
scaffold0076 (49-108)||(11294-11353)
[»] chr1 (35 HSPs)
chr1 (33-108)||(15466849-15466924)
chr1 (32-108)||(40610331-40610407)
chr1 (28-108)||(50061865-50061945)
chr1 (49-108)||(5477073-5477132)
chr1 (32-108)||(45740437-45740513)
chr1 (50-108)||(18959105-18959164)
chr1 (77-108)||(39010916-39010947)
chr1 (77-108)||(40595992-40596023)
chr1 (57-108)||(50141853-50141904)
chr1 (53-108)||(50659106-50659161)
chr1 (78-108)||(4604631-4604661)
chr1 (78-108)||(16987549-16987579)
chr1 (62-104)||(22389448-22389490)
chr1 (78-108)||(43640926-43640956)
chr1 (78-108)||(47059829-47059859)
chr1 (32-108)||(49453582-49453655)
chr1 (78-108)||(50527996-50528026)
chr1 (79-108)||(7645492-7645521)
chr1 (79-108)||(25098728-25098757)
chr1 (79-108)||(27352732-27352761)
chr1 (75-108)||(28253117-28253150)
chr1 (79-108)||(30530514-30530543)
chr1 (75-108)||(30631781-30631814)
chr1 (75-108)||(35846255-35846288)
chr1 (59-104)||(38913694-38913739)
chr1 (79-108)||(48872481-48872510)
chr1 (79-108)||(51339640-51339669)
chr1 (56-108)||(16836031-16836083)
chr1 (56-104)||(17526526-17526574)
chr1 (79-107)||(27327843-27327871)
chr1 (56-108)||(29264105-29264157)
chr1 (32-104)||(31427850-31427922)
chr1 (56-108)||(32966369-32966421)
chr1 (32-108)||(46948081-46948157)
chr1 (44-108)||(50436247-50436310)
[»] scaffold0054 (1 HSPs)
scaffold0054 (56-108)||(31517-31569)
[»] scaffold0014 (1 HSPs)
scaffold0014 (34-108)||(198326-198401)
[»] scaffold0011 (1 HSPs)
scaffold0011 (57-108)||(219582-219633)
[»] scaffold0002 (1 HSPs)
scaffold0002 (66-108)||(6529-6571)
[»] scaffold0003 (1 HSPs)
scaffold0003 (75-108)||(119935-119968)
[»] scaffold0041 (1 HSPs)
scaffold0041 (76-108)||(34508-34540)


Alignment Details
Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 37856074 - 37856150
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||| || |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  37856074 agtgatatttaaacatctatttgaaacaacttttgtgataatctcttttttctctcttttcattggtcaaaaacaat 37856150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 30180685 - 30180609
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || || |||||||||||||||||| || ||  |||||||||||||||||||| |||||||||||||    
T  30180685 agtgatatttgaacatctatttgaaacaatttttgcgacaacctcttttttctctcttttcatgggtcaaaaacaat 30180609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 48866823 - 48866899
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || || |||||||||||| |||||||| ||  ||||||||||||||||||||| ||||||||||||    
T  48866823 agtgatatttgaacatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattagtcaaaaacaat 48866899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 21752815 - 21752760
Alignment:
Q  53 tgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||| |||||||| ||| | ||||||||||||||||||||||||||||||||    
T  21752815 tgaaacaacttttgtgacaatttattttttctctcttttcattggtcaaaaacaat 21752760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 5378805 - 5378729
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||| ||  |||||| |||| |||| | | ||| |||||| |||||||||||||||||||||||||||    
T  5378805 agtgatatttaaacatccatttgagacaacttttttaacaatttcttttctctctcttttcattggtcaaaaacaat 5378729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 37351883 - 37351959
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || | | |||||| | || |||||||| ||| ||||||||||||||||| ||||||||||||||||    
T  37351883 agtgatatttgaacaatcatttgatataacttttgtgacaatttcttttttctctctttttattggtcaaaaacaat 37351959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 39875730 - 39875778
Alignment:
Q  60 atttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||||||||    
T  39875730 atttatgtgacaatttcttttttctctcttttcattggtcaaaaacaat 39875778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 108
Target Start/End: Original strand, 5198686 - 5198729
Alignment:
Q  65 tgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||| |||||||||||||||||||| |||||||||||||    
T  5198686 tgtgataatttcttttttctctcttttcatcggtcaaaaacaat 5198729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 42204662 - 42204695
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||||    
T  42204662 tcttttttctctcttttcattggtcaaaaacaat 42204695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 43445585 - 43445516
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaa 101  Q
    |||||||||| || | | |||||| ||||||||||||| ||| |||||||||| |||||| |||||||||    
T  43445585 agtgatatttgaacaatcatttgatacaatttttgtgacaatttcttttttctttctttttattggtcaa 43445516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 21839026 - 21839102
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || |  ||||||| ||||||||||| | ||| | |||||||||| ||||||||||| |||||||||    
T  21839026 agtgatatttgaacaactatttgatacaatttttgtaacaatttattttttctcttttttcattggttaaaaacaat 21839102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 44894367 - 44894443
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || ||  |||||| | ||||||||||| ||  |||||| ||||||||||||||||| |||||||||    
T  44894367 agtgatatttgaacatccatttgagataatttttgtgacaacttcttttatctctcttttcattggtaaaaaacaat 44894443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 32933724 - 32933653
Alignment:
Q  33 gtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    ||||||||| || | |||||||| |||| |||||||| ||| |||||||| ||| |||| ||||||||||||    
T  32933724 gtgatatttgaacaattatttgatacaacttttgtgacaatttcttttttttctatttttattggtcaaaaa 32933653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 33684837 - 33684782
Alignment:
Q  53 tgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||| |||||||| ||  |||||||||| ||||||||||||| |||||||||    
T  33684837 tgaaacaacttttgtgacaacttcttttttctatcttttcattggtaaaaaacaat 33684782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 108
Target Start/End: Original strand, 41077442 - 41077473
Alignment:
Q  77 ttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||    
T  41077442 ttttttctctcttttcattggtcaaaaacaat 41077473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 46651825 - 46651774
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||||| ||  ||| ||||||||||||||||||||||||||||||    
T  46651825 acaattcttgtgacaacttctattttctctcttttcattggtcaaaaacaat 46651774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 12142044 - 12141986
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||| |||||||| ||  | |||||||| |||||||||||||||||||||||    
T  12142044 atttgatacaacttttgtgacaactttttttttctttcttttcattggtcaaaaacaat 12141986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 21858907 - 21858849
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| |||||| |||||||||||  |||||||| || |||||||||| |||||||||||    
T  21858907 attttaaacaacttttgtgataacttcttttttttcacttttcattgatcaaaaacaat 21858849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 29034217 - 29034187
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  29034217 tttttctctcttttcattggtcaaaaacaat 29034187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 41985027 - 41985073
Alignment:
Q  62 ttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||  ||||||||||||| ||||||| ||||||||||||    
T  41985027 ttttgtgataacttcttttttctctcctttcattagtcaaaaacaat 41985073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 2790312 - 2790279
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||||||||||||||||||||||||||    
T  2790312 tcttttctctctcttttcattggtcaaaaacaat 2790279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 5978710 - 5978681
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  5978710 ttttctctcttttcattggtcaaaaacaat 5978681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 6353907 - 6353830
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatctttttt-ctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || |  ||||||| |||| |||||||| ||| |||||||| |||| ||||||||||| |||||||||    
T  6353907 agtgatatttgaaaaactatttgatacaacttttgtgacaatttctttttttctcttttttcattggttaaaaacaat 6353830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 18157125 - 18157154
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  18157125 ttttctctcttttcattggtcaaaaacaat 18157154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 25887718 - 25887685
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||| ||||||||||||||||||||||    
T  25887718 tcttttttctcacttttcattggtcaaaaacaat 25887685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 25940607 - 25940636
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  25940607 ttttctctcttttcattggtcaaaaacaat 25940636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 27688768 - 27688739
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  27688768 ttttctctcttttcattggtcaaaaacaat 27688739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 104
Target Start/End: Complemental strand, 30862779 - 30862742
Alignment:
Q  67 tgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  30862779 tgataatttcttttttctctctttttattggtcaaaaa 30862742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 32171059 - 32171088
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaa 104  Q
    ||||||||||||||||||||||||||||||    
T  32171059 tcttttttctctcttttcattggtcaaaaa 32171088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 34304616 - 34304645
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaa 104  Q
    ||||||||||||||||||||||||||||||    
T  34304616 tcttttttctctcttttcattggtcaaaaa 34304645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 45607159 - 45607126
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||| ||||||||||||||||||||||    
T  45607159 tcttttttctcacttttcattggtcaaaaacaat 45607126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 47193062 - 47193029
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||| ||||||||||||||||||||||    
T  47193062 tcttttttctcacttttcattggtcaaaaacaat 47193029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 108
Target Start/End: Original strand, 8792534 - 8792566
Alignment:
Q  76 cttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||| ||||||||||||    
T  8792534 cttttttctctcttttcattagtcaaaaacaat 8792566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 41254910 - 41254878
Alignment:
Q  76 cttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||| |||||||||    
T  41254910 cttttttctctcttttcattggttaaaaacaat 41254878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 41966506 - 41966430
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || |  ||||| ||||||||||| ||| ||  |||||||||||  |||| ||||||||||||||||    
T  41966506 agtgatatttgaacaactattttaaacaatttttatgacaacttcttttttctcagtttttattggtcaaaaacaat 41966430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 23690410 - 23690337
Alignment:
Q  31 cagtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    ||||||||||| || || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23690410 cagtgatatttgaacatctatttgaaacaatttttgtgacaatatcttttttctctcttttcattggtcaaaaa 23690337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 38952867 - 38952791
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||| | |||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  38952867 agtgatatttaaacaattatttgatacaatttttgtgataatttcttttttctcttttttcattggtcaaaaacaat 38952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 4896393 - 4896469
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || || |||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||    
T  4896393 agtgatatttgaacatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattggtcaaaaacaat 4896469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 31275336 - 31275248
Alignment:
Q  20 ttctgatcgagcagtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||| ||| |||||||||| || |   |||||| |||| |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  31275336 ttctgatagagtagtgatatttgaacaaccatttgatacaacttttgtgacaatttcttttttctctcttttcattggtcaaaaacaat 31275248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 55927162 - 55927086
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || ||  |||||| ||||||||||||| ||| |||||| |||||||||||||||||||||||||||    
T  55927162 agtgatatttgaacatccatttgagacaatttttgtgacaatttcttttctctctcttttcattggtcaaaaacaat 55927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 9162227 - 9162168
Alignment:
Q  49 tatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||| ||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  9162227 tatttgatacaatttttgtgacaacttcttttttctctcttttcattggtcaaaaacaat 9162168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 51296064 - 51296142
Alignment:
Q  26 tcgagcagtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    ||||| |||||||||| || || |||||||||||| |||||||| ||| ||||||||||||||||  ||||||||||||    
T  51296064 tcgagtagtgatatttgaacatctatttgaaacaacttttgtgacaatctcttttttctctctttctattggtcaaaaa 51296142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 42915112 - 42915188
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || |  ||||||| |||| |||||||| ||  |||||||||||||||||||||||| |||||||||    
T  42915112 agtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaat 42915188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 5234382 - 5234440
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||| |||||||| ||| | ||||||||||||||| ||||||||||||||||    
T  5234382 atttgatacaacttttgtgacaattttttttttctctctttttattggtcaaaaacaat 5234440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 46173697 - 46173639
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||| |||||||| ||| |||||||| ||||||||||||||| |||||||||    
T  46173697 atttgatacaacttttgtgacaatttcttttttttctcttttcattggtaaaaaacaat 46173639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 47998771 - 47998696
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || | | |||||| |||| |||||||||||  | |||||||| |||||||||||||||||||||||    
T  47998771 agtgatatttgaacaatcatttgatacaacttttgtgataactt-ttttttctttcttttcattggtcaaaaacaat 47998696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 51389498 - 51389418
Alignment:
Q  28 gagcagtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||| || |   |||||| |||| |||||||| ||  ||||||||||||||||||||| || |||||||||    
T  51389498 gagcagtgatatttgaacaaccatttgatacaacttttgtgacaacttcttttttctctcttttcattagtaaaaaacaat 51389418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 51717177 - 51717253
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || | | || ||| |||| || ||||| ||| ||||||||||||||||||||||||||||| ||||    
T  51717177 agtgatatttgaacaatcatatgagacaacttatgtgacaatttcttttttctctcttttcattggtcaaaatcaat 51717253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 24772848 - 24772773
Alignment:
Q  33 gtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||| || ||  |||||| |||| | |||||| ||| |||||| |||||||||| ||||||||||||||||    
T  24772848 gtgatatttgaacatccatttgagacaactcttgtgacaatttcttttctctctctttttattggtcaaaaacaat 24772773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 25523114 - 25523165
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| |||||||||||  | |||| |||||||||||||||||||||||||||    
T  25523114 acaacttttgtgataacttattttctctctcttttcattggtcaaaaacaat 25523165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 36408114 - 36408173
Alignment:
Q  49 tatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||| |||| |||||||| ||| |||||||| |||||||||||| || |||||||||    
T  36408114 tatttgatacaacttttgtgacaatttcttttttttctcttttcattagttaaaaacaat 36408173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 36413237 - 36413296
Alignment:
Q  49 tatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||| |||| |||||||| ||| |||||||| |||||||||||| || |||||||||    
T  36413237 tatttgatacaacttttgtgacaatttcttttttttctcttttcattagttaaaaacaat 36413296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 41609590 - 41609641
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||| ||| |  |||||||||||||| ||||||||||||||||    
T  41609590 acaatttttgtgacaatctactttttctctcttttaattggtcaaaaacaat 41609641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 108
Target Start/End: Complemental strand, 46912031 - 46912000
Alignment:
Q  77 ttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||    
T  46912031 ttttttctctcttttcattggtcaaaaacaat 46912000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 47471978 - 47471907
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaa 103  Q
    |||||||||| |||| ||||||| || ||||||||||| ||  | |||| |||||||||| |||||||||||    
T  47471978 agtgatatttgaataattatttgcaataatttttgtgacaacttattttctctctctttttattggtcaaaa 47471907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 108
Target Start/End: Original strand, 12074086 - 12074120
Alignment:
Q  74 atcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||| ||||    
T  12074086 atcttttttctctcttttcattggtcaaaatcaat 12074120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Original strand, 28676093 - 28676123
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  28676093 tttttctctcttttcattggtcaaaaacaat 28676123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 31658067 - 31658021
Alignment:
Q  62 ttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||| ||  ||||||||||| ||||||||||||||||||||||    
T  31658067 ttttgtgacaacttcttttttctcacttttcattggtcaaaaacaat 31658021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 37249085 - 37249015
Alignment:
Q  34 tgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    |||||||| || || |||||||||||| ||||| |||||  |||||||||||| |||| |||| |||||||    
T  37249085 tgatatttgaacatctatttgaaacaacttttgagataacctcttttttctctatttttattgctcaaaaa 37249015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 1031890 - 1031857
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||| ||||||||||||||||||||||    
T  1031890 tcttttttctcacttttcattggtcaaaaacaat 1031857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 12638955 - 12638926
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  12638955 ttttctctcttttcattggtcaaaaacaat 12638926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 24337292 - 24337321
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaa 104  Q
    ||||||||||||||||||||||||||||||    
T  24337292 tcttttttctctcttttcattggtcaaaaa 24337321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 31240783 - 31240750
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||| |||||||||    
T  31240783 tcttttttctctcttttcattggttaaaaacaat 31240750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 32621758 - 32621729
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  32621758 ttttctctcttttcattggtcaaaaacaat 32621729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 34974588 - 34974555
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||| ||||||||||||||||||||||    
T  34974588 tcttttttctcacttttcattggtcaaaaacaat 34974555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 39844194 - 39844227
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||| ||||||||||||||||    
T  39844194 tcttttttctctctttttattggtcaaaaacaat 39844227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 46567060 - 46567031
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  46567060 ttttctctcttttcattggtcaaaaacaat 46567031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 30546664 - 30546632
Alignment:
Q  182 tatcataaatttgttgtacaaatatcatttctc 214  Q
    ||||||||||||||||||||||||| |||||||    
T  30546664 tatcataaatttgttgtacaaatataatttctc 30546632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 36444288 - 36444364
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || | | || ||| |||||| |||||| ||  ||| |||||||| |||||||||||||||||||||    
T  36444288 agtgatatttgaacaatcatatgatacaattcttgtgacaacttctattttctcttttttcattggtcaaaaacaat 36444364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 37547197 - 37547137
Alignment:
Q  48 ttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| ||| ||||||| ||||||||  |||||||||||  ||||||||||||||| |||||    
T  37547197 ttatctgagacaatttatgtgataacttcttttttctcatttttcattggtcaaatacaat 37547137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 44166086 - 44166010
Alignment:
Q  33 gtgatatttaaatatttatttgaaacaatttttgtgataa-tatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||| | |||||||| | ||||||||| | || | | |||||| |||||||||||| ||||||||||||    
T  44166086 gtgatatttaaacaattatttgatataatttttgtaacaacttttttttttttctcttttcatttgtcaaaaacaat 44166010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 190778 - 190854
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||  |||| ||||||||||||||||    
T  190778 agtgatatttgaatatttatttgaaacaatttttgtgataatttcttttttctcattttttattggtcaaaaacaat 190854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 28811606 - 28811530
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| ||||| |||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||    
T  28811606 agtgatatttgaatatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattggtcaaaaacaat 28811530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 33567150 - 33567208
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||| |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  33567150 atttgatacaacttttgtgacaatttcttttttctctcttttcattggtcaaaaacaat 33567208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 39595434 - 39595376
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||| |||||||| ||  ||||||||||||||||||||||||||||||||||    
T  39595434 atttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaat 39595376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 4834917 - 4834998
Alignment:
Q  27 cgagcagtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||||||| || || ||||||| |||| | |||||||||  |||||| |||||||||||||||||||| ||||||    
T  4834917 cgagcaatgatatttgaacatctatttgagacaactcttgtgataacttcttttctctctcttttcattggtcaagaacaat 4834998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 125252 - 125194
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||| ||||| || ||  ||||||||||||||||||||||||||||||||||    
T  125252 atttgatacaacttttgcgacaacttcttttttctctcttttcattggtcaaaaacaat 125194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 34381172 - 34381114
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| | ||||||||||| ||  || |||||||||||||||||||||||||||||||    
T  34381172 atttgatataatttttgtgacaacttcgtttttctctcttttcattggtcaaaaacaat 34381114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 11666314 - 11666281
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||||    
T  11666314 tcttttttctctcttttcattggtcaaaaacaat 11666281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 19376068 - 19376101
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||||    
T  19376068 tcttttttctctcttttcattggtcaaaaacaat 19376101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 2117533 - 2117609
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || |  ||||||| |||| |||||||| ||  |||||||||||| ||||||||||| |||||||||    
T  2117533 agtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctcttttttcattggttaaaaacaat 2117609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 11306874 - 11306798
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || |  ||||||| |||| ||||| || ||  |||||||||||||||||||||||| |||||||||    
T  11306874 agtgatatttgaacaactatttgatacaacttttgagacaacttcttttttctctcttttcattggttaaaaacaat 11306798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 12718297 - 12718349
Alignment:
Q  56 aacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||| ||  |||||| ||| |||||||||||||||||||||||    
T  12718297 aacaatttttgtgacaacttcttttctctttcttttcattggtcaaaaacaat 12718349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 12779523 - 12779575
Alignment:
Q  56 aacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||| ||  |||||| ||| |||||||||||||||||||||||    
T  12779523 aacaatttttgtgacaacttcttttctctttcttttcattggtcaaaaacaat 12779575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 20719908 - 20719980
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    |||||||||| || ||  |||||| |||| |||||||| ||  |||||| |||||||||||||||||||||||    
T  20719908 agtgatatttgaacatccatttgagacaacttttgtgacaacttcttttctctctcttttcattggtcaaaaa 20719980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 5130300 - 5130347
Alignment:
Q  61 tttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||| ||  |||||||||||||||||||||||| |||||||||    
T  5130300 tttttgtgacaacttcttttttctctcttttcattggttaaaaacaat 5130347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 13613886 - 13613933
Alignment:
Q  61 tttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| |||| ||| |||||||||||||||||||||||| |||||||||    
T  13613886 ttttggtgacaatttcttttttctctcttttcattggttaaaaacaat 13613933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 15531813 - 15531860
Alignment:
Q  61 tttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||| ||| ||| |||||||||||||||||||||||| |||||||||    
T  15531813 tttttatgacaatttcttttttctctcttttcattggttaaaaacaat 15531860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 108
Target Start/End: Complemental strand, 21749507 - 21749460
Alignment:
Q  61 tttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| |||| ||| |||||||||||||||||||||||| |||||||||    
T  21749507 ttttggtgacaatttcttttttctctcttttcattggttaaaaacaat 21749460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 39458794 - 39458743
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||| ||  | |||||| |||||||||||||||||||||||||    
T  39458794 acaatttttgtgacaactttttttttatctcttttcattggtcaaaaacaat 39458743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 23991363 - 23991333
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  23991363 tttttctctcttttcattggtcaaaaacaat 23991333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 108
Target Start/End: Original strand, 33243664 - 33243710
Alignment:
Q  62 ttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||| ||| | |||||||||||||||||||||| |||||||||    
T  33243664 ttttgtgacaatttattttttctctcttttcattggttaaaaacaat 33243710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 91346 - 91317
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  91346 ttttctctcttttcattggtcaaaaacaat 91317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 471949 - 471916
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||| |||||||||||    
T  471949 tcttttttctctcttttcattgatcaaaaacaat 471916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 6865727 - 6865756
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  6865727 ttttctctcttttcattggtcaaaaacaat 6865756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 8087934 - 8087901
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||| ||||||||||||||||||||||||||||    
T  8087934 tctttcttctctcttttcattggtcaaaaacaat 8087901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 9636098 - 9636127
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  9636098 ttttctctcttttcattggtcaaaaacaat 9636127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 13734300 - 13734329
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  13734300 ttttctctcttttcattggtcaaaaacaat 13734329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 34767313 - 34767382
Alignment:
Q  35 gatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    ||||||| || || ||||||| |||| | |||||| ||  |||||| |||||||||||||||||||||||    
T  34767313 gatatttgaacatctatttgagacaactcttgtgacaacttcttttctctctcttttcattggtcaaaaa 34767382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 36624449 - 36624420
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  36624449 ttttctctcttttcattggtcaaaaacaat 36624420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 40566157 - 40566186
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  40566157 ttttctctcttttcattggtcaaaaacaat 40566186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 42909854 - 42909821
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||||||||||||||||||||||||||    
T  42909854 tcttttctctctcttttcattggtcaaaaacaat 42909821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 52727341 - 52727413
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    ||||||||||||| || ||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||    
T  52727341 agtgatatttaaacatctatttgaaacaatttttgtgacaatctcttttttctctattttcattggtcaaaaa 52727413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 41957691 - 41957615
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||| |   |||| |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  41957691 agtgatatttaaacaaccattttaaacaacttttgtgataatttcttttttctcacttttcattggtcaaaaacaat 41957615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 47849848 - 47849772
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || || |||||||||||| | |||||| |   ||||||||||||||||||||||||||||||||||    
T  47849848 agtgatatttgaacatctatttgaaacaactcttgtgacagcctcttttttctctcttttcattggtcaaaaacaat 47849772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 7231917 - 7231975
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||| |||||||| ||| | ||||||||||||||||||||||||||||||||    
T  7231917 atttgatacaacttttgtgacaatttattttttctctcttttcattggtcaaaaacaat 7231975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 11173610 - 11173552
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||| |||||||| ||  ||||||||||||||||||||||||||||||||||    
T  11173610 atttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaat 11173552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 39540386 - 39540341
Alignment:
Q  59 aatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||    
T  39540386 aatttttgtgataatttattttttctctcttttcattggtcaaaaa 39540341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 29706081 - 29706005
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || |  ||||||| |||| |||||||| ||  |||||||||||||||||||||||| |||||||||    
T  29706081 agtgatatttgaacaactatttgatacaacttttgtgacaacttcttttttctctcttttcattggtaaaaaacaat 29706005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 34271393 - 34271453
Alignment:
Q  44 atatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    |||| |||||||||||| |||||  | ||| ||||||||||||||||||||||||||||||    
T  34271393 atatctatttgaaacaacttttgatacaatctcttttttctctcttttcattggtcaaaaa 34271453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 34733187 - 34733262
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || || |||||||||||| ||||| || ||| |||||||||||| ||||| |||||||||||||||    
T  34733187 agtgatatttgaacatctatttgaaacaacttttgagacaatctcttttttctcttttttc-ttggtcaaaaacaat 34733262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 48946029 - 48945949
Alignment:
Q  28 gagcagtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| ||||||||| || | | |||||||||||||| | ||||||  |||||||||||  |||||||||||||||||||||    
T  48946029 gagcggtgatatttgaacaatcatttgaaacaatttatatgataacttcttttttctcaattttcattggtcaaaaacaat 48945949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 49131032 - 49130956
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || ||  |||||| ||||||||||||| ||  |||||| |||||||||||||| ||||||||||||    
T  49131032 agtgatatttgaacatccatttgagacaatttttgtgacaacttcttttctctctcttttcattagtcaaaaacaat 49130956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 37302992 - 37303043
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| |||||||| ||| |||||||||||||||||||||||| |||||||||    
T  37302992 acaacttttgtgacaatttcttttttctctcttttcattggtaaaaaacaat 37303043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 20380800 - 20380858
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| |||||| |||||||| ||  ||||||||||| ||||||||||||||||||||||    
T  20380800 attttaaacaacttttgtgacaacttcttttttctcacttttcattggtcaaaaacaat 20380858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 46473288 - 46473230
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||| |||| ||| ||  ||||||||||||||||||||||||||||||||||    
T  46473288 atttgatacaacttttatgacaacttcttttttctctcttttcattggtcaaaaacaat 46473230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 39604182 - 39604215
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||||    
T  39604182 tcttttttctctcttttcattggtcaaaaacaat 39604215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 32687869 - 32687929
Alignment:
Q  49 tatttgaaacaatttttg-tgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||| |||| ||||| ||||||  |||||||||||||||||||||||| |||||||||    
T  32687869 tatttgatacaacttttggtgataacttcttttttctctcttttcattggttaaaaacaat 32687929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 33007514 - 33007462
Alignment:
Q  57 acaatttttgtgataatatctttttt-ctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||| ||  |||||||| ||||||||||||||||||||||||||    
T  33007514 acaatttttgtgacaacttctttttttctctcttttcattggtcaaaaacaat 33007462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 5188389 - 5188338
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| |||||||| ||  |||||||||||||||||||||||| |||||||||    
T  5188389 acaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaat 5188338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 19418054 - 19418129
Alignment:
Q  33 gtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||| || ||  |||||| |||| | |||||| ||  |||||| |||||||||||||||||||||||||||    
T  19418054 gtgatatttgaacatccatttgagacaactcttgtgacaacttcttttctctctcttttcattggtcaaaaacaat 19418129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 108
Target Start/End: Original strand, 37215169 - 37215200
Alignment:
Q  77 ttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||    
T  37215169 ttttttctctcttttcattggtcaaaaacaat 37215200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 37303536 - 37303485
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| |||||||| ||| | |||||||||||||||||||| |||||||||||    
T  37303536 acaacttttgtgacaatttattttttctctcttttcattgatcaaaaacaat 37303485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 108
Target Start/End: Original strand, 43409303 - 43409334
Alignment:
Q  77 ttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||    
T  43409303 ttttttctctcttttcattggtcaaaaacaat 43409334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 8066487 - 8066457
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  8066487 tttttctctcttttcattggtcaaaaacaat 8066457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Original strand, 34628014 - 34628044
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  34628014 tttttctctcttttcattggtcaaaaacaat 34628044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 36799530 - 36799500
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  36799530 tttttctctcttttcattggtcaaaaacaat 36799500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 41717395 - 41717365
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  41717395 tttttctctcttttcattggtcaaaaacaat 41717365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 49457697 - 49457667
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  49457697 tttttctctcttttcattggtcaaaaacaat 49457667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 1901866 - 1901895
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  1901866 ttttctctcttttcattggtcaaaaacaat 1901895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 1911312 - 1911341
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  1911312 ttttctctcttttcattggtcaaaaacaat 1911341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 4209477 - 4209518
Alignment:
Q  63 tttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    |||| |||||| |||||||| |||||||||||||||||||||    
T  4209477 tttgagataatttcttttttttctcttttcattggtcaaaaa 4209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 6126589 - 6126556
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||| |||||||||    
T  6126589 tcttttttctctcttttcattggttaaaaacaat 6126556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 14207510 - 14207477
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||| ||||||||||||||||    
T  14207510 tcttttttctctctttttattggtcaaaaacaat 14207477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 14215258 - 14215225
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||| ||||||||||||||||    
T  14215258 tcttttttctctctttttattggtcaaaaacaat 14215225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 25959482 - 25959511
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  25959482 ttttctctcttttcattggtcaaaaacaat 25959511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 28269941 - 28269908
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| |||||||||||||||||||||||    
T  28269941 tcttttttctatcttttcattggtcaaaaacaat 28269908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 28300586 - 28300615
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  28300586 ttttctctcttttcattggtcaaaaacaat 28300615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 31326839 - 31326810
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  31326839 ttttctctcttttcattggtcaaaaacaat 31326810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 35272162 - 35272129
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||| ||||||||||||||||    
T  35272162 tcttttttctctctttttattggtcaaaaacaat 35272129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 35554055 - 35554084
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  35554055 ttttctctcttttcattggtcaaaaacaat 35554084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 41112008 - 41112041
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||||||||||||||||||||||||||    
T  41112008 tcttttctctctcttttcattggtcaaaaacaat 41112041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 108
Target Start/End: Complemental strand, 48649732 - 48649683
Alignment:
Q  59 aatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||  | |||| ||||| |||||||||||||||||||||    
T  48649732 aatttttgtgataacttattttctctcttttttcattggtcaaaaacaat 48649683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 108
Target Start/End: Original strand, 41877536 - 41877580
Alignment:
Q  65 tgtgataatatcttttt-tctctcttttcattggtcaaaaacaat 108  Q
    ||||| ||| ||||||| |||||||||||||||||||||||||||    
T  41877536 tgtgacaatttctttttctctctcttttcattggtcaaaaacaat 41877580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 113803 - 113728
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaa 107  Q
    ||||||||||||| || ||||||||||||||||||||| ||  ||| |||||||||||||||||||||||||||||    
T  113803 agtgatatttaaacatctatttgaaacaatttttgtgacaacctctcttttctctcttttcattggtcaaaaacaa 113728  T

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Target: chr6 (Bit Score: 52; Significance: 7e-21; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 32457146 - 32457221
Alignment:
Q  33 gtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||| || |||||||||||| |||||||||||  |||||||||||| |||||||||||||||||||||    
T  32457146 gtgatatttaaacatctatttgaaacaaattttgtgataacctcttttttctcttttttcattggtcaaaaacaat 32457221  T

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Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 1897864 - 1897788
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || || |||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||    
T  1897864 agtgatatttgaacatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattggtcaaaaacaat 1897788  T

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Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 2582839 - 2582764
Alignment:
Q  33 gtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||| || || |||||||||||| |||||||| ||  |||||||||||||||||||||| |||||||||||    
T  2582839 gtgatatttgaacatctatttgaaacaacttttgtgacaacctcttttttctctcttttcattgatcaaaaacaat 2582764  T

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Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 32853037 - 32853113
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || |  ||||||| ||||||||||||| ||  |||||||||||| ||||||||||| |||||||||    
T  32853037 agtgatatttgaacaactatttgatacaatttttgtgacaacttcttttttctcttttttcattggttaaaaacaat 32853113  T

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Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 29383710 - 29383659
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||| ||||| ||  ||||||||||||||||||||||||||||||||||    
T  29383710 acaatttatgtgacaacttcttttttctctcttttcattggtcaaaaacaat 29383659  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 10387740 - 10387785
Alignment:
Q  62 ttttgtgataatatcttttttctctcttttcattggtcaaaaacaa 107  Q
    |||||||||||| |||||||||| |||||| |||||||||||||||    
T  10387740 ttttgtgataatttcttttttctatctttttattggtcaaaaacaa 10387785  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 2340576 - 2340500
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||| | | |||||| |||| |||||| ||||| |  |||||||||||||| ||||||| ||||||||    
T  2340576 agtgatatttaaacaatcatttgagacaacttttgtaataattttctttttctctctttttattggtcgaaaacaat 2340500  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 34021108 - 34021141
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||||||||||||||||||||||||||    
T  34021108 tcttttctctctcttttcattggtcaaaaacaat 34021141  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 11635649 - 11635617
Alignment:
Q  182 tatcataaatttgttgtacaaatatcatttctc 214  Q
    ||||||||| |||||||||||||||||||||||    
T  11635649 tatcataaaattgttgtacaaatatcatttctc 11635617  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 25166761 - 25166729
Alignment:
Q  76 cttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||| |||||||||    
T  25166761 cttttttctctcttttcattggttaaaaacaat 25166729  T

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Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 5359516 - 5359440
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || || |||||||||||| |||||||| ||| ||||||||||||||||| ||||||||||||||||    
T  5359516 agtgatatttgaacatctatttgaaacaacttttgtgacaatctcttttttctctctttttattggtcaaaaacaat 5359440  T

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Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 23258192 - 23258134
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  23258192 atttgaaacaatttttgtgacaacttcttttttctctcttttcattggtcaaaaacaat 23258134  T

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Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 37524321 - 37524397
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || || ||||||||| ||  ||||||| ||  ||||||||||||||||||||||||||||||||||    
T  37524321 agtgatatttgaacatctatttgaaataacctttgtgacaacctcttttttctctcttttcattggtcaaaaacaat 37524397  T

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Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 22852749 - 22852808
Alignment:
Q  49 tatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||| ||||||||||||||| ||| ||||||||||| ||||||||| ||||||||||||    
T  22852749 tattttaaacaatttttgtgacaatttcttttttctcacttttcatttgtcaaaaacaat 22852808  T

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Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 38128437 - 38128495
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| ||||||||||||||| ||  ||||||||||| ||||||||||||||||||||||    
T  38128437 attttaaacaatttttgtgacaacttcttttttctcacttttcattggtcaaaaacaat 38128495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 16011837 - 16011886
Alignment:
Q  59 aatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  16011837 aatttttgtgacaatttcttttttctctcttttcattggttaaaaacaat 16011886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 44672126 - 44672202
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || | |||||||| |||| |||||||| |   |||||||||||||||||||||||| |||||||||    
T  44672126 agtgatatttgaacaattatttgatacaacttttgtgacacattcttttttctctcttttcattggttaaaaacaat 44672202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 22767283 - 22767232
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| |||||||| ||  ||||||||||||||||||||||||||||||||||    
T  22767283 acaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaat 22767232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 26871204 - 26871146
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||| | |||||| ||| |||||| |||||||||||||||||||||||||||    
T  26871204 atttgagacaactcttgtgacaatttcttttctctctcttttcattggtcaaaaacaat 26871146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 28927841 - 28927783
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| | ||||||||||| ||  |||||| |||||||||||||||||||||||||||    
T  28927841 atttgataaaatttttgtgacaacttcttttctctctcttttcattggtcaaaaacaat 28927783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 40413274 - 40413332
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||| |||| ||||||  ||||||||||||||||||||| ||||||||||||    
T  40413274 atttgatacaacttttatgataacttcttttttctctcttttcattagtcaaaaacaat 40413332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 108
Target Start/End: Complemental strand, 42689933 - 42689887
Alignment:
Q  62 ttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||| ||| |||||||||||||||||||||||| |||||||||    
T  42689933 ttttgtgacaatttcttttttctctcttttcattggttaaaaacaat 42689887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 426236 - 426203
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||||    
T  426236 tcttttttctctcttttcattggtcaaaaacaat 426203  T

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Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 896042 - 896009
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||||    
T  896042 tcttttttctctcttttcattggtcaaaaacaat 896009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 108
Target Start/End: Original strand, 28473441 - 28473514
Alignment:
Q  35 gatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||| || ||||| |||| ||||||||| | | ||  |||||||||||||||||||||||| |||||||||    
T  28473441 gatatttgaacatttaattgagacaatttttttaacaacttcttttttctctcttttcattggtaaaaaacaat 28473514  T

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Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 41344562 - 41344638
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || ||  |||||| |||| | || ||||||  |||||| |||||||||||||||||||||||||||    
T  41344562 agtgatatttgaacatccatttgagacaactcttatgataacttcttttctctctcttttcattggtcaaaaacaat 41344638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 295707 - 295648
Alignment:
Q  49 tatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||| | || |||||||| ||| | |||||||||| |||||||||||||||||||||    
T  295707 tatttgagataacttttgtgacaatttattttttctctattttcattggtcaaaaacaat 295648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 7678893 - 7678834
Alignment:
Q  49 tatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||| |||| |||||| | ||  |||||||||||||||||||||||| |||||||||    
T  7678893 tatttgatacaacttttgtaacaacttcttttttctctcttttcattggttaaaaacaat 7678834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 24503049 - 24503019
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  24503049 tttttctctcttttcattggtcaaaaacaat 24503019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 40604621 - 40604674
Alignment:
Q  57 acaatttttgtgataatatcttttt--tctctcttttcattggtcaaaaacaat 108  Q
    ||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||    
T  40604621 acaatttatgtgataatttcttttttctctctctcttcattggtcaaaaacaat 40604674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 1796614 - 1796585
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  1796614 ttttctctcttttcattggtcaaaaacaat 1796585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 3206383 - 3206432
Alignment:
Q  59 aatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||| || ||  |||||||||||||| ||||||||||||||||    
T  3206383 aatttttgtgacaacatactttttctctcttttaattggtcaaaaacaat 3206432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 3989040 - 3989007
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||| ||||||||||||    
T  3989040 tcttttttctctcttttcattagtcaaaaacaat 3989007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 6005075 - 6005046
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  6005075 ttttctctcttttcattggtcaaaaacaat 6005046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 104
Target Start/End: Original strand, 26507839 - 26507868
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaa 104  Q
    ||||||||||||||||||||||||||||||    
T  26507839 tcttttttctctcttttcattggtcaaaaa 26507868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 27631078 - 27631049
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  27631078 ttttctctcttttcattggtcaaaaacaat 27631049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 32725722 - 32725751
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  32725722 ttttctctcttttcattggtcaaaaacaat 32725751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 37101622 - 37101655
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||| |||||||||    
T  37101622 tcttttttctctcttttcattggttaaaaacaat 37101655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 104
Target Start/End: Complemental strand, 42996597 - 42996568
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaa 104  Q
    ||||||||||||||||||||||||||||||    
T  42996597 tcttttttctctcttttcattggtcaaaaa 42996568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 24946136 - 24946104
Alignment:
Q  76 cttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| ||||||||||||||||||||||    
T  24946136 cttttttctcacttttcattggtcaaaaacaat 24946104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 27776323 - 27776267
Alignment:
Q  48 ttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    |||||||| |||||||| |||| ||| | ||||| ||||||||| ||||||||||||    
T  27776323 ttatttgagacaattttggtgacaatttttttttcctctctttttattggtcaaaaa 27776267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 33817311 - 33817259
Alignment:
Q  56 aacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||| |||| ||| |  |||||||||||||| ||||||||||||||||    
T  33817311 aacaattttagtgacaatcttgtttttctctctttttattggtcaaaaacaat 33817259  T

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Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 39454140 - 39454216
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || || |||||||||||| ||||| || ||| ||||||||||||||||||||||||||||||||||    
T  39454140 agtgatatttgaacatctatttgaaacaagttttgagacaatctcttttttctctcttttcattggtcaaaaacaat 39454216  T

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Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 3091919 - 3091843
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || | |||||||| |||| |||||||| ||  ||||||||||||||||||||||||||||||||||    
T  3091919 agtgatatttgaacaattatttgatacaacttttgtgacaacttcttttttctctcttttcattggtcaaaaacaat 3091843  T

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Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 6365368 - 6365288
Alignment:
Q  28 gagcagtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||| || || ||||| |||||| |||| ||| ||  ||||||||||||||||| ||||||||||||||||    
T  6365368 gagcagtgatatttgaacatctatttaaaacaacttttatgacaacctcttttttctctctttttattggtcaaaaacaat 6365288  T

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Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 14140232 - 14140308
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || | | |||| ||| || |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  14140232 agtgatatttgaacaatcatttaaaataacttttgtgacaatttcttttttctctcttttcattggtcaaaaacaat 14140308  T

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Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 29795614 - 29795538
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || ||  ||||||||||| |||||||| ||   |||||||||||||||||||||||||||||||||    
T  29795614 agtgatatttgaacatcaatttgaaacaacttttgtgacaaccacttttttctctcttttcattggtcaaaaacaat 29795538  T

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Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 34442291 - 34442215
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || || ||||||||||||||||| ||| ||  |||||| |||||||||| ||||||||||||||||    
T  34442291 agtgatatttgaacatctatttgaaacaatttttctgacaacctcttttctctctctttttattggtcaaaaacaat 34442215  T

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Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 108
Target Start/End: Original strand, 25801722 - 25801780
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||| ||||||||| |  ||||||||||||||||||||||||||||||||||    
T  25801722 atttgagacaacttttgtgatcacttcttttttctctcttttcattggtcaaaaacaat 25801780  T

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Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 36435857 - 36435783
Alignment:
Q  34 tgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||| || ||||||||||||||| |||||||| ||  |||||| ||||||||||||||| | |||||||||    
T  36435857 tgatatttgaacatttatttgaaacaacttttgtgacaacctcttttctctctcttttcattgataaaaaacaat 36435783  T

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Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 14714164 - 14714088
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || ||  |||||| ||||||||||||| ||  |||||| ||||||||||||||| |||||||||||    
T  14714164 agtgatatttgaacatccatttgagacaatttttgtgacaacttcttttctctctcttttcattgatcaaaaacaat 14714088  T

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Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 42081215 - 42081139
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || ||| |||||| ||||||||| | | ||  |||||||||||| |||||||||||||||||||||    
T  42081215 agtgatatttgaacattaatttgagacaatttttttaacaacttcttttttctctattttcattggtcaaaaacaat 42081139  T

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Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 42251813 - 42251889
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||| | | ||||| ||||| || ||||| ||  ||||||||||||||||||||||||||||| ||||    
T  42251813 agtgatatttaaacaatcatttggaacaacttatgtgacaacttcttttttctctcttttcattggtcaaaatcaat 42251889  T

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Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 1889300 - 1889249
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||| ||||| ||  ||||||||||||||||||||||||||||||||||    
T  1889300 acaatttatgtgacaacttcttttttctctcttttcattggtcaaaaacaat 1889249  T

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Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 11164286 - 11164345
Alignment:
Q  49 tatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||| |||| |||||||| ||  |||||||||||||||||||||||| |||||||||    
T  11164286 tatttgatacaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaat 11164345  T

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Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 13104632 - 13104581
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||| ||  | ||||||||||||||||||||||||||||||||    
T  13104632 acaatttttgtgacaacttattttttctctcttttcattggtcaaaaacaat 13104581  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 32750151 - 32750100
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||| ||  | ||||||||||||||||||||||||||||||||    
T  32750151 acaatttttgtgacaacttattttttctctcttttcattggtcaaaaacaat 32750100  T

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Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 43650442 - 43650516
Alignment:
Q  34 tgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||| | | |||||| |||| || ||||| ||| ||||||||||||||||| ||||||||||| ||||    
T  43650442 tgatatttaaacaatcatttgatacaacttatgtgacaatttcttttttctctctttttattggtcaaaatcaat 43650516  T

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Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 36376787 - 36376820
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||||    
T  36376787 tcttttttctctcttttcattggtcaaaaacaat 36376820  T

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Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 40371272 - 40371227
Alignment:
Q  59 aatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    ||||||||||||||| | ||||||||||||||| ||||||||||||    
T  40371272 aatttttgtgataatctattttttctctcttttaattggtcaaaaa 40371227  T

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Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 23344882 - 23344958
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || ||| |||||| |||| | || ||| ||  |||||| |||||||||||||||||||||||||||    
T  23344882 agtgatatttgaacattcatttgagacaactcttctgacaacttcttttctctctcttttcattggtcaaaaacaat 23344958  T

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Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 5455371 - 5455422
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| ||||| | |||| |||||||||||||||||||||||| |||||||||    
T  5455371 acaacttttggggtaatttcttttttctctcttttcattggttaaaaacaat 5455422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 7086042 - 7086093
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||| ||  | |||| |||||||||||||||||||||||||||    
T  7086042 acaatttttgtgacaacttattttctctctcttttcattggtcaaaaacaat 7086093  T

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Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 13711214 - 13711163
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| |||||||| ||  |||||||||||||||||||||||| |||||||||    
T  13711214 acaacttttgtgacaacttcttttttctctcttttcattggttaaaaacaat 13711163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 65 - 108
Target Start/End: Original strand, 31296769 - 31296812
Alignment:
Q  65 tgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||    
T  31296769 tgtgacaatttcttttttctctcttttcattggtcaaaatcaat 31296812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 108
Target Start/End: Complemental strand, 34249713 - 34249682
Alignment:
Q  77 ttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||    
T  34249713 ttttttctctcttttcattggtcaaaaacaat 34249682  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 22390312 - 22390254
Alignment:
Q  50 atttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||| | |||||| ||  |||||| |||||||||||||||||||||||||||    
T  22390312 atttgagacaactcttgtgacaacttcttttctctctcttttcattggtcaaaaacaat 22390254  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 30856939 - 30856909
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  30856939 tttttctctcttttcattggtcaaaaacaat 30856909  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 5067577 - 5067610
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||| ||||||||||||||||||||||    
T  5067577 tcttttttctcacttttcattggtcaaaaacaat 5067610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 5167682 - 5167711
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  5167682 ttttctctcttttcattggtcaaaaacaat 5167711  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 11229257 - 11229290
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||| ||||||||||||||||||||||    
T  11229257 tcttttttctcacttttcattggtcaaaaacaat 11229290  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 19668127 - 19668156
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  19668127 ttttctctcttttcattggtcaaaaacaat 19668156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 22195798 - 22195733
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttt-tctctcttttcattg 96  Q
    |||||||||| |||| |||||||| | ||||||||||||||| | ||||| |||||||||| ||||    
T  22195798 agtgatatttgaataattatttgagataatttttgtgataatttttttttctctctctttttattg 22195733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 107
Target Start/End: Original strand, 36763459 - 36763488
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaa 107  Q
    ||||||||||||||||||||||||||||||    
T  36763459 tttttctctcttttcattggtcaaaaacaa 36763488  T

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Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 37631303 - 37631336
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||| ||||||||||||||||||    
T  37631303 tcttttttctctcttctcattggtcaaaaacaat 37631336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 43725340 - 43725307
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||| ||||||||||||||||||||||    
T  43725340 tcttttttctcacttttcattggtcaaaaacaat 43725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 2013178 - 2013254
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || ||  |||||| |||| | |||||| ||  | |||| |||||||||||||||||||||||||||    
T  2013178 agtgatattttaacatccatttgagacaactcttgtgacaacttattttctctctcttttcattggtcaaaaacaat 2013254  T

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Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 3960050 - 3959998
Alignment:
Q  56 aacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||| |||| ||| ||| || ||||||||||||||||||| |||||||||||    
T  3960050 aacaacttttatgacaatttcatttttctctcttttcattgatcaaaaacaat 3959998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 4263781 - 4263833
Alignment:
Q  56 aacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| ||| ||  |||||||||||| || ||||||||||||||||||    
T  4263781 aacaatttttatgacaacttcttttttctcttttctcattggtcaaaaacaat 4263833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 107
Target Start/End: Complemental strand, 10288283 - 10288255
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaa 107  Q
    |||||||||||||||||||||||||||||    
T  10288283 ttttctctcttttcattggtcaaaaacaa 10288255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 12600226 - 12600150
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || |  ||||| | |||| |||||||| ||  |||||||||||||||||||||||| || ||||||    
T  12600226 agtgatatttgaacaactatttcatacaacttttgtgacaacttcttttttctctcttttcattggttaagaacaat 12600150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 32128311 - 32128232
Alignment:
Q  28 gagcagtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||| |||||||| || |  ||||||  ||||| ||| ||||||| | ||||||||||||||| ||||||||||||||||    
T  32128311 gagcaatgatatttgaacaactatttggtacaatctttatgataattt-ttttttctctctttttattggtcaaaaacaat 32128232  T

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Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 36133152 - 36133076
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || |  ||||| | |||| |||||||| ||  |||||||||||||||||||||||| || ||||||    
T  36133152 agtgatatttgaacaactatttcatacaacttttgtgacaacttcttttttctctcttttcattggttaagaacaat 36133076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 39057 - 38985
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    |||||||||| || || |||||||||||| |||||||| ||| |||||||||||||||||||||||| |||||    
T  39057 agtgatatttgaacatctatttgaaacaacttttgtgacaatctcttttttctctcttttcattggtaaaaaa 38985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 11353 - 11294
Alignment:
Q  49 tatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||| |||||||| ||  ||||||||||||||||||||||||||||||||||    
T  11353 tatttgaaacaacttttgtgacaacctcttttttctctcttttcattggtcaaaaacaat 11294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 15466924 - 15466849
Alignment:
Q  33 gtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||| ||||| ||||| ||| ||||||||||| ||| |||||||||| |||||| ||| ||||||||||||    
T  15466924 gtgatatttgaatatctatttaaaataatttttgtgacaatctcttttttctttctttttatttgtcaaaaacaat 15466849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 40610407 - 40610331
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || ||  |||||| |||| |||||||| ||  |||||| |||||||||||||||||||||||||||    
T  40610407 agtgatatttgaacatccatttgagacaacttttgtgacaacttcttttctctctcttttcattggtcaaaaacaat 40610331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 50061865 - 50061945
Alignment:
Q  28 gagcagtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||| || ||||||||||||||||| || | | ||  |||||| |||||||||| |||| |||||||||||    
T  50061865 gagcagtgatatttgaacatttatttgaaacaattcttataacaacttcttttctctctctttttattgatcaaaaacaat 50061945  T

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Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Original strand, 5477073 - 5477132
Alignment:
Q  49 tatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||| |||| |||||||| ||  ||||||||||||||||| ||||||||||||||||    
T  5477073 tatttgatacaacttttgtgacaacttcttttttctctctttttattggtcaaaaacaat 5477132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 45740437 - 45740513
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || | | |||||||| ||||||| ||| ||  |||||||||||  |||||||||||||||||||||    
T  45740437 agtgatatttgaacaatcatttgaaataatttttatgacaacttcttttttctcaattttcattggtcaaaaacaat 45740513  T

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Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 18959164 - 18959105
Alignment:
Q  50 atttgaaacaatttttgtgataatatctttt-ttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||||||||| || ||| | |||| ||||||||||||||||||||||||||||    
T  18959164 atttgatacaatttttgcgacaattttttttcttctctcttttcattggtcaaaaacaat 18959105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 108
Target Start/End: Complemental strand, 39010947 - 39010916
Alignment:
Q  77 ttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||    
T  39010947 ttttttctctcttttcattggtcaaaaacaat 39010916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 108
Target Start/End: Original strand, 40595992 - 40596023
Alignment:
Q  77 ttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||||    
T  40595992 ttttttctctcttttcattggtcaaaaacaat 40596023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 50141853 - 50141904
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||| |||||||| ||| | |||| |||||||||||||||||||||||||||    
T  50141853 acaacttttgtgacaatttattttctctctcttttcattggtcaaaaacaat 50141904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 50659106 - 50659161
Alignment:
Q  53 tgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||| || ||||| ||  |||||| |||||||||||||||||||||||||||    
T  50659106 tgaaacaacttatgtgacaacttcttttctctctcttttcattggtcaaaaacaat 50659161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 4604661 - 4604631
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  4604661 tttttctctcttttcattggtcaaaaacaat 4604631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Complemental strand, 16987579 - 16987549
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  16987579 tttttctctcttttcattggtcaaaaacaat 16987549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 104
Target Start/End: Original strand, 22389448 - 22389490
Alignment:
Q  62 ttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    |||||||| ||  ||||||||||||||||||||||||||||||    
T  22389448 ttttgtgacaacttcttttttctctcttttcattggtcaaaaa 22389490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Original strand, 43640926 - 43640956
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  43640926 tttttctctcttttcattggtcaaaaacaat 43640956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Original strand, 47059829 - 47059859
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  47059829 tttttctctcttttcattggtcaaaaacaat 47059859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 49453655 - 49453582
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || |  ||||||| |||| |||||||| ||   ||||||||||||||||||||||| |||||||||    
T  49453655 agtgatatttgaacaactatttgatacaacttttgtgacaa---cttttttctctcttttcattggttaaaaacaat 49453582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 108
Target Start/End: Original strand, 50527996 - 50528026
Alignment:
Q  78 tttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||||||||||    
T  50527996 tttttctctcttttcattggtcaaaaacaat 50528026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 7645492 - 7645521
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  7645492 ttttctctcttttcattggtcaaaaacaat 7645521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 25098728 - 25098757
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  25098728 ttttctctcttttcattggtcaaaaacaat 25098757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 27352761 - 27352732
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  27352761 ttttctctcttttcattggtcaaaaacaat 27352732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 28253150 - 28253117
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||| |||||||||||||||||||||||||||    
T  28253150 tcttttctctctcttttcattggtcaaaaacaat 28253117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 30530514 - 30530543
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  30530514 ttttctctcttttcattggtcaaaaacaat 30530543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 30631781 - 30631814
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||| ||||||||||||||||||||||    
T  30631781 tcttttttctcacttttcattggtcaaaaacaat 30631814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Original strand, 35846255 - 35846288
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||| ||||||||||||||||||||||    
T  35846255 tcttttttctcacttttcattggtcaaaaacaat 35846288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 38913739 - 38913694
Alignment:
Q  59 aatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    ||||||||||||||  | |||| |||||||||||||||||||||||    
T  38913739 aatttttgtgataacttattttctctctcttttcattggtcaaaaa 38913694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Complemental strand, 48872510 - 48872481
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  48872510 ttttctctcttttcattggtcaaaaacaat 48872481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 108
Target Start/End: Original strand, 51339640 - 51339669
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||||||||||    
T  51339640 ttttctctcttttcattggtcaaaaacaat 51339669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 16836031 - 16836083
Alignment:
Q  56 aacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||| |||||||| ||  ||||||||||  ||||||||||||||||||||||    
T  16836031 aacaacttttgtgacaacttcttttttcttacttttcattggtcaaaaacaat 16836083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 17526574 - 17526526
Alignment:
Q  56 aacaatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    |||||||||| ||| ||| || |||||||||||||| ||||||||||||    
T  17526574 aacaatttttatgacaatctcatttttctctctttttattggtcaaaaa 17526526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 107
Target Start/End: Original strand, 27327843 - 27327871
Alignment:
Q  79 ttttctctcttttcattggtcaaaaacaa 107  Q
    |||||||||||||||||||||||||||||    
T  27327843 ttttctctcttttcattggtcaaaaacaa 27327871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 29264157 - 29264105
Alignment:
Q  56 aacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||| || ||||||||| |||||| |||||||||| ||||||||||| ||||    
T  29264157 aacaacttatgtgataatttcttttctctctctttttattggtcaaaatcaat 29264105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 31427850 - 31427922
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaa 104  Q
    |||||||||| || | |||||| |||||| |||| ||| ||| |||||||| ||  |||||||||||||||||    
T  31427850 agtgatatttgaacaattattttaaacaacttttatgacaatttcttttttttcatttttcattggtcaaaaa 31427922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 32966421 - 32966369
Alignment:
Q  56 aacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||| |||||||| ||  || |||||||||||||| ||||||||||||||||    
T  32966421 aacaacttttgtgacaacctcatttttctctctttttattggtcaaaaacaat 32966369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 46948157 - 46948081
Alignment:
Q  32 agtgatatttaaatatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||| || ||  |||||| |||| | |||||| ||  |||||| ||| |||||||||||||||||||||||    
T  46948157 agtgatatttgaacatccatttgagacaactcttgtgacaacttcttttctctatcttttcattggtcaaaaacaat 46948081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 50436310 - 50436247
Alignment:
Q  44 atatttatttgaaacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||| |||| |||||||| ||  ||||| |||||| ||||||||||| |||||||||    
T  50436310 atatttatttgatacaacttttgtgacaacttctttattctct-ttttcattggttaaaaacaat 50436247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 31517 - 31569
Alignment:
Q  56 aacaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||| ||  | |||||||||||||||||||||| |||||||||    
T  31517 aacaatttttgtgacaactttttttttctctcttttcattggttaaaaacaat 31569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 198326 - 198401
Alignment:
Q  34 tgatatttaaatatttatttgaa-acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||| |||||||||||||  || |||||||||||||| |  ||| ||||||||||||||| | |||||||||    
T  198326 tgatatttgaatatttatttgatgactatttttgtgataattttatttgtctctcttttcattgattaaaaacaat 198401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 219582 - 219633
Alignment:
Q  57 acaatttttgtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||| ||||| ||  |||||| |||||||||||||||||||||||||||    
T  219582 acaatttatgtgacaacttcttttctctctcttttcattggtcaaaaacaat 219633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 6571 - 6529
Alignment:
Q  66 gtgataatatcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||  |||||||||||||||||||||| |||||||||||    
T  6571 gtgataacttcttttttctctcttttcattgatcaaaaacaat 6529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 108
Target Start/End: Complemental strand, 119968 - 119935
Alignment:
Q  75 tcttttttctctcttttcattggtcaaaaacaat 108  Q
    |||||||||||||||||||||||| |||||||||    
T  119968 tcttttttctctcttttcattggtaaaaaacaat 119935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 108
Target Start/End: Complemental strand, 34540 - 34508
Alignment:
Q  76 cttttttctctcttttcattggtcaaaaacaat 108  Q
    ||||||||||||||||||||||| |||||||||    
T  34540 cttttttctctcttttcattggttaaaaacaat 34508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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