View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17318_low_54 (Length: 249)

Name: NF17318_low_54
Description: NF17318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17318_low_54
NF17318_low_54
[»] chr2 (35 HSPs)
chr2 (1-239)||(24567210-24567448)
chr2 (84-214)||(25119784-25119914)
chr2 (81-219)||(10899925-10900063)
chr2 (82-217)||(24842725-24842860)
chr2 (81-185)||(24574563-24574667)
chr2 (81-185)||(22783087-22783191)
chr2 (84-219)||(24303475-24303610)
chr2 (81-219)||(28702648-28702786)
chr2 (81-219)||(19303804-19303942)
chr2 (81-185)||(19301389-19301493)
chr2 (87-211)||(21919494-21919618)
chr2 (82-185)||(21137636-21137739)
chr2 (85-184)||(22682468-22682567)
chr2 (105-219)||(22256759-22256873)
chr2 (81-219)||(24803027-24803165)
chr2 (81-219)||(28722694-28722832)
chr2 (89-214)||(39171475-39171600)
chr2 (89-214)||(40249915-40250040)
chr2 (89-185)||(4219202-4219298)
chr2 (89-185)||(9764173-9764269)
chr2 (89-185)||(9898983-9899079)
chr2 (89-185)||(22916270-22916366)
chr2 (89-185)||(24329159-24329255)
chr2 (81-185)||(26876266-26876370)
chr2 (89-185)||(34791627-34791723)
chr2 (119-185)||(21163357-21163423)
chr2 (81-219)||(24723905-24724043)
chr2 (119-185)||(29253556-29253622)
chr2 (119-185)||(43092015-43092081)
chr2 (89-185)||(10276293-10276389)
chr2 (89-185)||(11396582-11396678)
chr2 (89-185)||(43353736-43353832)
chr2 (119-185)||(27230775-27230841)
chr2 (119-185)||(35262340-35262406)
chr2 (119-185)||(35272965-35273031)
[»] chr1 (29 HSPs)
chr1 (81-219)||(9345312-9345447)
chr1 (81-219)||(21125784-21125922)
chr1 (81-219)||(21207233-21207371)
chr1 (81-185)||(20943290-20943394)
chr1 (93-219)||(25449677-25449803)
chr1 (10-79)||(28137559-28137628)
chr1 (102-185)||(27857342-27857426)
chr1 (81-219)||(23023402-23023540)
chr1 (81-219)||(21196113-21196251)
chr1 (81-185)||(22431418-22431522)
chr1 (85-185)||(23975896-23975996)
chr1 (89-214)||(51630595-51630720)
chr1 (89-185)||(4176595-4176691)
chr1 (89-185)||(12615755-12615851)
chr1 (89-185)||(12739821-12739917)
chr1 (97-185)||(20874657-20874745)
chr1 (89-185)||(21876441-21876537)
chr1 (89-185)||(35639471-35639567)
chr1 (89-185)||(36237862-36237958)
chr1 (119-214)||(7516607-7516702)
chr1 (99-214)||(22958640-22958755)
chr1 (119-185)||(19186528-19186594)
chr1 (120-185)||(7690903-7690968)
chr1 (89-185)||(3180894-3180990)
chr1 (89-185)||(5641142-5641238)
chr1 (89-185)||(5842497-5842593)
chr1 (119-185)||(38093782-38093848)
chr1 (119-185)||(38104408-38104474)
chr1 (119-185)||(47609368-47609434)
[»] chr3 (61 HSPs)
chr3 (81-217)||(18696380-18696516)
chr3 (81-219)||(14078799-14078937)
chr3 (81-219)||(14908157-14908295)
chr3 (82-219)||(21639381-21639518)
chr3 (81-185)||(17244703-17244807)
chr3 (81-219)||(53058203-53058341)
chr3 (12-80)||(12307152-12307220)
chr3 (85-185)||(16306518-16306618)
chr3 (81-219)||(14952721-14952859)
chr3 (89-219)||(11188542-11188672)
chr3 (87-185)||(19886600-19886698)
chr3 (81-185)||(18123169-18123273)
chr3 (81-161)||(2559733-2559813)
chr3 (81-185)||(1062878-1062982)
chr3 (85-185)||(1462961-1463061)
chr3 (81-185)||(8997341-8997445)
chr3 (81-185)||(29934953-29935057)
chr3 (81-185)||(29984107-29984211)
chr3 (123-217)||(15960820-15960914)
chr3 (81-185)||(4432503-4432607)
chr3 (136-219)||(11221387-11221470)
chr3 (81-185)||(15847637-15847741)
chr3 (81-219)||(12754141-12754279)
chr3 (119-185)||(29462608-29462674)
chr3 (82-143)||(5211217-5211278)
chr3 (89-214)||(5580994-5581119)
chr3 (89-214)||(6491707-6491832)
chr3 (89-214)||(9983249-9983374)
chr3 (89-214)||(12288341-12288466)
chr3 (81-185)||(1785467-1785571)
chr3 (89-185)||(5538411-5538507)
chr3 (89-185)||(6183356-6183452)
chr3 (81-185)||(7796011-7796115)
chr3 (81-185)||(9382054-9382158)
chr3 (89-185)||(13131021-13131117)
chr3 (89-185)||(14474972-14475068)
chr3 (81-185)||(16029549-16029653)
chr3 (89-185)||(16392438-16392534)
chr3 (89-185)||(20674587-20674683)
chr3 (89-185)||(23766645-23766741)
chr3 (89-185)||(39381435-39381531)
chr3 (90-185)||(13374058-13374153)
chr3 (90-185)||(13384652-13384747)
chr3 (85-185)||(19658992-19659089)
chr3 (89-214)||(10628309-10628434)
chr3 (89-214)||(12238979-12239104)
chr3 (89-185)||(505560-505656)
chr3 (89-185)||(4753070-4753166)
chr3 (89-185)||(5519619-5519715)
chr3 (89-185)||(5867086-5867182)
chr3 (81-185)||(11207485-11207589)
chr3 (89-185)||(19787773-19787869)
chr3 (89-185)||(24384908-24385004)
chr3 (89-185)||(24669221-24669317)
chr3 (89-185)||(41693000-41693096)
chr3 (119-214)||(16397381-16397476)
chr3 (119-185)||(8784044-8784110)
chr3 (119-185)||(11273775-11273841)
chr3 (119-185)||(28315628-28315694)
chr3 (119-185)||(38204033-38204099)
chr3 (81-181)||(14312806-14312906)
[»] chr7 (38 HSPs)
chr7 (81-219)||(16309184-16309322)
chr7 (81-219)||(13173700-13173838)
chr7 (85-215)||(15087486-15087616)
chr7 (81-219)||(13028413-13028551)
chr7 (81-219)||(13878675-13878813)
chr7 (81-219)||(21212068-21212206)
chr7 (81-219)||(16408331-16408469)
chr7 (81-185)||(16311499-16311603)
chr7 (81-219)||(16547483-16547621)
chr7 (81-219)||(16618041-16618179)
chr7 (92-185)||(16106538-16106631)
chr7 (12-80)||(18404487-18404555)
chr7 (81-219)||(14172196-14172334)
chr7 (81-185)||(4413487-4413591)
chr7 (81-219)||(18439920-18440058)
chr7 (87-219)||(15466301-15466433)
chr7 (130-219)||(13680922-13681011)
chr7 (89-185)||(4221341-4221437)
chr7 (89-185)||(176223-176319)
chr7 (89-185)||(458460-458556)
chr7 (89-185)||(2707087-2707183)
chr7 (89-185)||(6868704-6868800)
chr7 (89-185)||(8626678-8626774)
chr7 (89-185)||(11003912-11004008)
chr7 (81-185)||(15879296-15879400)
chr7 (89-185)||(17951588-17951684)
chr7 (89-185)||(22098474-22098570)
chr7 (119-185)||(20988420-20988486)
chr7 (89-185)||(1996889-1996985)
chr7 (89-185)||(24743434-24743530)
chr7 (89-185)||(26391568-26391664)
chr7 (89-185)||(40043578-40043674)
chr7 (89-185)||(42875181-42875277)
chr7 (119-185)||(8003540-8003606)
chr7 (119-185)||(9093750-9093816)
chr7 (119-185)||(11014551-11014617)
chr7 (119-185)||(26654810-26654876)
chr7 (81-185)||(9168906-9169010)
[»] chr5 (50 HSPs)
chr5 (81-219)||(26763994-26764132)
chr5 (81-219)||(21200481-21200619)
chr5 (89-219)||(31144781-31144911)
chr5 (12-80)||(20936435-20936503)
chr5 (93-219)||(13532524-13532650)
chr5 (81-219)||(17455957-17456095)
chr5 (81-219)||(23487138-23487276)
chr5 (81-219)||(25113377-25113515)
chr5 (81-219)||(25172468-25172606)
chr5 (81-185)||(19465485-19465589)
chr5 (81-185)||(21704608-21704712)
chr5 (81-184)||(26782958-26783061)
chr5 (81-219)||(20553294-20553432)
chr5 (89-214)||(6977290-6977415)
chr5 (89-214)||(22677600-22677725)
chr5 (89-214)||(23297761-23297886)
chr5 (89-214)||(39500139-39500264)
chr5 (89-185)||(9337467-9337563)
chr5 (89-185)||(14031555-14031651)
chr5 (89-185)||(23363609-23363705)
chr5 (81-185)||(23393922-23394026)
chr5 (89-185)||(23698293-23698389)
chr5 (89-185)||(30236678-30236774)
chr5 (89-185)||(31834993-31835089)
chr5 (89-185)||(36591769-36591865)
chr5 (89-185)||(39354009-39354105)
chr5 (89-185)||(40391871-40391967)
chr5 (119-185)||(1120584-1120650)
chr5 (119-185)||(5299824-5299890)
chr5 (119-185)||(27621454-27621520)
chr5 (119-185)||(34773422-34773488)
chr5 (119-185)||(42044293-42044359)
chr5 (89-185)||(14567305-14567401)
chr5 (89-185)||(15741482-15741578)
chr5 (89-185)||(17608575-17608671)
chr5 (89-185)||(17720431-17720527)
chr5 (89-185)||(22148029-22148125)
chr5 (89-185)||(24568601-24568697)
chr5 (89-185)||(24826127-24826223)
chr5 (89-185)||(27051489-27051585)
chr5 (89-185)||(27461675-27461771)
chr5 (89-185)||(31350047-31350143)
chr5 (89-185)||(35217016-35217112)
chr5 (89-185)||(36689211-36689307)
chr5 (81-185)||(43620538-43620642)
chr5 (119-185)||(14456294-14456360)
chr5 (119-185)||(16002578-16002644)
chr5 (119-185)||(24809429-24809495)
chr5 (119-185)||(37739249-37739315)
chr5 (81-185)||(24982054-24982158)
[»] scaffold0047 (2 HSPs)
scaffold0047 (81-211)||(7190-7320)
scaffold0047 (119-185)||(34336-34402)
[»] scaffold0056 (1 HSPs)
scaffold0056 (81-219)||(27084-27222)
[»] chr8 (34 HSPs)
chr8 (81-219)||(17015094-17015232)
chr8 (81-219)||(17541969-17542107)
chr8 (81-185)||(25164803-25164907)
chr8 (81-219)||(15976874-15977012)
chr8 (81-219)||(22462938-22463076)
chr8 (81-219)||(19941763-19941901)
chr8 (12-80)||(27010352-27010420)
chr8 (81-185)||(20257078-20257182)
chr8 (81-185)||(22672321-22672425)
chr8 (81-219)||(17287642-17287780)
chr8 (81-219)||(3842273-3842411)
chr8 (81-217)||(21297467-21297603)
chr8 (81-219)||(23791976-23792114)
chr8 (81-156)||(19940630-19940705)
chr8 (81-219)||(45569425-45569563)
chr8 (89-185)||(24666976-24667072)
chr8 (89-214)||(36302278-36302403)
chr8 (89-185)||(15782136-15782232)
chr8 (81-185)||(19234122-19234226)
chr8 (81-185)||(19427666-19427770)
chr8 (89-185)||(26119662-26119758)
chr8 (89-185)||(29075492-29075588)
chr8 (89-185)||(29085743-29085839)
chr8 (89-185)||(32079121-32079217)
chr8 (119-185)||(19138062-19138128)
chr8 (119-185)||(30316150-30316216)
chr8 (89-185)||(251160-251256)
chr8 (89-185)||(814261-814357)
chr8 (89-185)||(3350060-3350156)
chr8 (89-185)||(9367046-9367142)
chr8 (81-185)||(16745745-16745849)
chr8 (89-185)||(36087274-36087370)
chr8 (89-185)||(44490466-44490562)
chr8 (119-185)||(13689995-13690061)
[»] scaffold0035 (1 HSPs)
scaffold0035 (81-185)||(111069-111173)
[»] chr6 (35 HSPs)
chr6 (82-213)||(19874411-19874542)
chr6 (81-219)||(17926319-17926457)
chr6 (84-167)||(13137903-13137986)
chr6 (81-219)||(17062918-17063056)
chr6 (81-219)||(17447120-17447258)
chr6 (12-80)||(27521320-27521388)
chr6 (81-219)||(17609960-17610098)
chr6 (119-219)||(22307528-22307628)
chr6 (81-185)||(26940939-26941043)
chr6 (89-219)||(11204669-11204799)
chr6 (81-219)||(18553986-18554124)
chr6 (81-155)||(19448610-19448684)
chr6 (81-155)||(19450604-19450678)
chr6 (81-219)||(22385305-22385443)
chr6 (89-185)||(12864236-12864332)
chr6 (81-185)||(20031321-20031425)
chr6 (89-185)||(25984782-25984878)
chr6 (89-185)||(26874107-26874203)
chr6 (89-185)||(32963346-32963442)
chr6 (89-185)||(34808562-34808658)
chr6 (119-185)||(9113893-9113959)
chr6 (89-214)||(27383442-27383567)
chr6 (89-214)||(27473826-27473951)
chr6 (89-214)||(27503009-27503134)
chr6 (89-185)||(3670749-3670845)
chr6 (81-185)||(14054794-14054898)
chr6 (81-185)||(25804365-25804469)
chr6 (89-185)||(26034725-26034821)
chr6 (89-185)||(27351050-27351146)
chr6 (89-185)||(27411790-27411886)
chr6 (89-185)||(32302446-32302542)
chr6 (20-79)||(21996976-21997035)
chr6 (119-185)||(12718236-12718302)
chr6 (119-185)||(16958343-16958409)
chr6 (89-214)||(26042900-26043025)
[»] scaffold0622 (1 HSPs)
scaffold0622 (87-185)||(6888-6986)
[»] scaffold0113 (1 HSPs)
scaffold0113 (81-214)||(1736-1869)
[»] scaffold0004 (1 HSPs)
scaffold0004 (84-219)||(209942-210076)
[»] chr4 (38 HSPs)
chr4 (81-219)||(16852446-16852584)
chr4 (91-184)||(13694805-13694898)
chr4 (81-219)||(17246108-17246246)
chr4 (12-80)||(15458896-15458964)
chr4 (12-80)||(15819539-15819607)
chr4 (12-80)||(18113878-18113946)
chr4 (12-80)||(18160561-18160629)
chr4 (81-185)||(14712217-14712321)
chr4 (81-219)||(14905760-14905898)
chr4 (81-185)||(17527841-17527945)
chr4 (81-214)||(40455725-40455858)
chr4 (105-185)||(10662657-10662737)
chr4 (105-185)||(10876802-10876882)
chr4 (119-185)||(27816340-27816406)
chr4 (89-214)||(4989160-4989285)
chr4 (89-214)||(5021501-5021626)
chr4 (89-214)||(18753855-18753980)
chr4 (89-185)||(16265230-16265326)
chr4 (93-185)||(16820752-16820844)
chr4 (89-185)||(17927464-17927560)
chr4 (89-185)||(18131643-18131739)
chr4 (89-185)||(22005782-22005878)
chr4 (119-214)||(24649726-24649821)
chr4 (119-185)||(27175469-27175535)
chr4 (119-185)||(30927887-30927953)
chr4 (89-185)||(459928-460024)
chr4 (89-185)||(10741992-10742088)
chr4 (89-185)||(10955761-10955857)
chr4 (141-185)||(14903846-14903890)
chr4 (89-185)||(19945732-19945828)
chr4 (89-185)||(36027656-36027752)
chr4 (89-185)||(49516902-49516998)
chr4 (119-185)||(14837502-14837568)
chr4 (93-219)||(15195285-15195411)
chr4 (119-185)||(27665968-27666034)
chr4 (119-185)||(55746646-55746712)
chr4 (89-214)||(18065340-18065465)
chr4 (81-185)||(16316084-16316188)
[»] scaffold0022 (4 HSPs)
scaffold0022 (81-219)||(35969-36107)
scaffold0022 (81-219)||(134029-134167)
scaffold0022 (81-185)||(157671-157775)
scaffold0022 (119-185)||(45188-45254)
[»] scaffold0758 (1 HSPs)
scaffold0758 (85-185)||(2890-2990)
[»] scaffold0017 (1 HSPs)
scaffold0017 (91-219)||(9404-9532)
[»] scaffold0037 (1 HSPs)
scaffold0037 (81-210)||(75798-75927)
[»] scaffold0264 (1 HSPs)
scaffold0264 (12-80)||(6510-6578)
[»] scaffold0084 (1 HSPs)
scaffold0084 (81-185)||(47849-47953)
[»] scaffold0043 (1 HSPs)
scaffold0043 (85-185)||(3182-3282)
[»] scaffold0001 (1 HSPs)
scaffold0001 (12-80)||(134468-134536)
[»] scaffold0498 (1 HSPs)
scaffold0498 (81-185)||(1660-1764)
[»] scaffold0315 (1 HSPs)
scaffold0315 (89-219)||(7209-7338)
[»] scaffold0042 (1 HSPs)
scaffold0042 (81-219)||(4017-4155)
[»] scaffold1820 (1 HSPs)
scaffold1820 (81-217)||(162-298)
[»] scaffold0443 (1 HSPs)
scaffold0443 (93-185)||(2444-2536)
[»] scaffold0382 (1 HSPs)
scaffold0382 (81-185)||(2723-2827)
[»] scaffold1507 (1 HSPs)
scaffold1507 (81-219)||(779-917)
[»] scaffold0925 (1 HSPs)
scaffold0925 (81-219)||(3626-3764)
[»] scaffold0116 (1 HSPs)
scaffold0116 (81-219)||(22372-22510)
[»] scaffold0068 (1 HSPs)
scaffold0068 (81-185)||(9198-9302)
[»] scaffold0011 (1 HSPs)
scaffold0011 (119-219)||(166101-166201)
[»] scaffold0161 (2 HSPs)
scaffold0161 (81-219)||(11505-11643)
scaffold0161 (81-219)||(16178-16316)
[»] scaffold0015 (1 HSPs)
scaffold0015 (88-214)||(190440-190566)
[»] scaffold0272 (1 HSPs)
scaffold0272 (81-185)||(23967-24071)
[»] scaffold0211 (1 HSPs)
scaffold0211 (81-180)||(982-1081)
[»] scaffold0359 (1 HSPs)
scaffold0359 (89-148)||(7191-7250)
[»] scaffold0105 (1 HSPs)
scaffold0105 (119-185)||(38388-38454)


Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 24567210 - 24567448
Alignment:
Q  1 tgttccaaaagtttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggagaacatctagcaggtaagcttct 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24567210 tgttccaaaaatttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgagatggagaacatctagcaggtaagcttct 24567309  T
Q  101 tagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttcgctttaatgctt 200  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||    
T  24567310 tagaatcttgttcacacaatcagaagttacataacttttcttcagtatttgaagtctagagactagagtctgaaaccttgagtacttaactttaatgctt 24567409  T
Q  201 tcatcatctttcatcttgatactagtgctactcattctt 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24567410 tcatcatctttcatcttgatactagtgctactcattctt 24567448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 84 - 214
Target Start/End: Complemental strand, 25119914 - 25119784
Alignment:
Q  84 ctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagt 183  Q
    |||||||||||||||||||| |||||| |||||  ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25119914 ctagcaggtaagcttcttaggatcttgctcacatgatcagaagctacatagcttttcttcagaatttgaagtccagagactagagtctgaaaccttgagt 25119815  T
Q  184 acttcgctttaatgctttcatcatctttcat 214  Q
    || | || | |||||||||||||||||||||    
T  25119814 acatagcctcaatgctttcatcatctttcat 25119784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 10900063 - 10899925
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    |||||||||||||||||||||||||||||| |||||  |||| |||||||||||| |||||||| |||||||||||||||||| ||||||||||| ||||    
T  10900063 catctagcaggtaagcttcttagaatcttgctcacatgatcaaaagctacataacctttcttcaatatttgaagtccagagacaagagtctgaaatcttg 10899964  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |  | | ||| |||||||||| |||||||||||    
T  10899963 agtacatttcctcaatactttcatcatatttcatcttga 10899925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 217
Target Start/End: Original strand, 24842725 - 24842860
Alignment:
Q  82 atctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttga 181  Q
    ||||||||||||| |||||||| |||||| ||| |  || ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||     
T  24842725 atctagcaggtaaacttcttagtatcttgctcatatgattagaagctacgtaacttttcttcaatatttgaagtccagagactagagtctgaaatcttgt 24842824  T
Q  182 gtacttcgctttaatgctttcatcatctttcatctt 217  Q
    |||| |  | | ||| ||||||||||||||||||||    
T  24842825 gtacatttcctcaatactttcatcatctttcatctt 24842860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 24574563 - 24574667
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| ||||||||||||||||| |||||| |||||  ||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||| ||||    
T  24574563 catcttgcaggtaagcttcttagtatcttgctcacatgatcagaagctacacagcttttcttcagtatttgaagtccagaaactagagtgtgaaatcttg 24574662  T
Q  181 agtac 185  Q
    |||||    
T  24574663 agtac 24574667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 22783191 - 22783087
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||| ||| |||||| || |||||| |||||  ||||||||||||||| ||||||||||||||||||| |||||| ||||||||| |||| ||||    
T  22783191 catctagcaagtaggcttctaagtatcttgctcacatgatcagaagctacatagcttttcttcagtatttgaactccagaaactagagtcagaaatcttg 22783092  T
Q  181 agtac 185  Q
    |||||    
T  22783091 agtac 22783087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 24303610 - 24303475
Alignment:
Q  84 ctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagt 183  Q
    ||||||||||||||||| | || |||| ||||| |||||||||| |||||  ||||||||||||||||| ||| |||||  ||||||||||| |||||||    
T  24303610 ctagcaggtaagcttctcataagcttgctcacataatcagaagcaacatagtttttcttcagtatttgaggtctagagaaaagagtctgaaatcttgagt 24303511  T
Q  184 acttcgctttaatgctttcatcatctttcatcttga 219  Q
    || | || | ||| ||||||| || |||||||||||    
T  24303510 acatagcctcaatactttcataatatttcatcttga 24303475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 28702786 - 28702648
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| |||||||||||||| || |||||  |||||  |||||| |||||||| | |||||| ||||||||||||||||| |||||||||||||| |||     
T  28702786 catcttgcaggtaagcttctaagtatctttctcacatgatcagaggctacatagcctttctttagtatttgaagtccagaaactagagtctgaaatctta 28702687  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  28702686 agtacatttgc-tcaatactttcatcatctttcattttga 28702648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 19303942 - 19303804
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  19303942 catctagaaggcaagcttctcagaatcttgcttacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 19303843  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | |  || || |||||||| ||||||||||    
T  19303842 agtacatctcctctatactctcatcatccttcatcttga 19303804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 19301493 - 19301389
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  19301493 catctagaaggcaagcttctcagaatcttgcttacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 19301394  T
Q  181 agtac 185  Q
    |||||    
T  19301393 agtac 19301389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 21919618 - 21919494
Alignment:
Q  87 gcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtact 186  Q
    |||||||| ||| | | |||||||||||||  ||| |||| ||||||   ||||||||| || |||||||||||||||||||||||||| |||||||||     
T  21919618 gcaggtaaacttgtcaaaatcttgttcacatgatcggaagttacataggctttcttcagaatctgaagtccagagactagagtctgaaatcttgagtaca 21919519  T
Q  187 tcgctttaatgctttcatcatcttt 211  Q
    | || | |||||||||||| |||||    
T  21919518 tagcctcaatgctttcatcctcttt 21919494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 21137636 - 21137739
Alignment:
Q  82 atctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttga 181  Q
    |||| |||||| |||||||||| |||||| |||||  |||| ||| ||||||  ||||||||||||||||||||||| | |||| ||||||||| |||||    
T  21137636 atcttgcaggtgagcttcttagtatcttgctcacatgatcaaaagttacatagtttttcttcagtatttgaagtccataaactaaagtctgaaatcttga 21137735  T
Q  182 gtac 185  Q
    ||||    
T  21137736 gtac 21137739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 22682468 - 22682567
Alignment:
Q  85 tagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagta 184  Q
    ||||||||||||| ||||||||||| |||| |  |||||| ||||||||  |||||||||| |  ||||||| | |||||||||||||||||||||||||    
T  22682468 tagcaggtaagctccttagaatctttttcagatgatcagatgctacatagtttttcttcagaaactgaagtctaaagactagagtctgaaaccttgagta 22682567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 22256759 - 22256873
Alignment:
Q  105 atcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttcgctttaatgctttcat 204  Q
    |||||| |||||  ||||||| ||||||| |||||||||||||||||   |||||| |||||||||||||| ||||||||| |   || |||  ||||||    
T  22256759 atcttgctcacatgatcagaaactacatatcttttcttcagtatttggcatccagaaactagagtctgaaatcttgagtacatttgttcaatattttcat 22256858  T
Q  205 catctttcatcttga 219  Q
    |||||||||| ||||    
T  22256859 catctttcattttga 22256873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 24803165 - 24803027
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| || ||||| | ||||||| |||||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| || |    
T  24803165 catctagaaggcaaacttctcaaaatcttgctcacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatctcg 24803066  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | |  || || |||||||| ||||||||||    
T  24803065 agtacatctcctctatactctcatcatccttcatcttga 24803027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 28722832 - 28722694
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  ||||||||  ||||| || |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  28722832 catctagaaggcaagcttctgagaatcttgctaacatgatcagaagtaacatagctcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 28722733  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | |  || || |||||||| ||||||||||    
T  28722732 agtacatctcctctatactctcatcatccttcatcttga 28722694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 39171600 - 39171475
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  39171600 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 39171501  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     |||  || || ||||||||||||||    
T  39171500 tcttctatactctcatcatctttcat 39171475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 40249915 - 40250040
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  40249915 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 40250014  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     |||  || ||||||||||| |||||    
T  40250015 tcttctatactttcatcatccttcat 40250040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 4219202 - 4219298
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  4219202 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 4219298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 9764269 - 9764173
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  9764269 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 9764173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 9899079 - 9898983
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  9899079 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 9898983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 22916366 - 22916270
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  22916366 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 22916270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 24329255 - 24329159
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  24329255 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 24329159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 26876266 - 26876370
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  |||||| |  ||||| || |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  26876266 catctagaaggcaagcttctcagaatcttgctaacatgatcagatgtaacatagctcttcttcagtatttgtagtccagatactaaagtttgaaatcttg 26876365  T
Q  181 agtac 185  Q
    |||||    
T  26876366 agtac 26876370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 34791723 - 34791627
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  34791723 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 34791627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 21163423 - 21163357
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  21163423 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 21163357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 24723905 - 24724043
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| ||||||||||  |||||  |||||  ||||||||| || || ||||||||||||||||| |||| || | |||  |||||||| |||     
T  24723905 catctagtaggcaagcttcttaatatcttactcacatgatcagaagcaacctagcttttcttcagtatttgtagtctaggggctatggtctgaaatcttc 24724004  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |  | | ||| ||||||||||| ||||||||||    
T  24724005 agtacatttcctcaatactttcatcatccttcatcttga 24724043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 29253556 - 29253622
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  29253556 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 29253622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 43092015 - 43092081
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  43092015 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 43092081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 10276293 - 10276389
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  10276293 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 10276389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 11396678 - 11396582
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  |||||| || ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  11396678 aggtaagcttctcaaaatcttactaacatgatcagaggcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 11396582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 43353736 - 43353832
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  43353736 aggtaagcttctcaaaatcttactaacatgatcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 43353832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 27230775 - 27230841
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  27230775 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 27230841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 35262340 - 35262406
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  35262340 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 35262406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 35272965 - 35273031
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  35272965 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 35273031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 9345312 - 9345447
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    |||| |||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  9345312 catcaagcaggtaagcttcttagaatcttgttcaca---tgagaagctacataacttttcttcagtatctgaagtccagagactatggtctgaaaccttg 9345408  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| | || | ||||||||||||||| ||||||||||    
T  9345409 agtacatagcctcaatgctttcatcatcattcatcttga 9345447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 21125922 - 21125784
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||||| |||||| || |||||| |||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||     
T  21125922 catctagcaggtaggcttctaagtatcttgctcacatgatcagaagctacataacttttcttcagtatttgaagtccagaaactagagtctgaaatcttc 21125823  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  21125822 agtacatttgc-tcaatactttcatcatctttcattttga 21125784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 21207371 - 21207233
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||||| |||| | || |||||| |||||  ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  21207371 catctagcaggtaggcttatgagtatcttgctcacatgatcagaagctacatatcttttcttcagtatttgaagtccagaaactagagtctgaaatcttg 21207272  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    | ||| || || | ||| ||||||||||||||||| ||||    
T  21207271 aatacatttgc-tcaatactttcatcatctttcattttga 21207233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 20943290 - 20943394
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| ||||||||||||||||| |||||| |||||  |||||||| | | || |||||||||||||||||||||||||| |||||||||||||| ||||    
T  20943290 catcttgcaggtaagcttcttagtatcttgctcacatgatcagaagtttcttagcttttcttcagtatttgaagtccagaaactagagtctgaaatcttg 20943389  T
Q  181 agtac 185  Q
    |||||    
T  20943390 agtac 20943394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 219
Target Start/End: Complemental strand, 25449803 - 25449677
Alignment:
Q  93 aagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac-ttcgct 191  Q
    |||||||| ||||||||| |||||  |||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||| || ||     
T  25449803 aagcttctcagaatcttgctcacatgatcagaggctacatagcttttcttcagtatttgaagtccagaaactagagtttgaaatcttgagtacatttgc- 25449705  T
Q  192 ttaatgctttcatcatctttcatcttga 219  Q
    | ||| ||||||||||||||||| ||||    
T  25449704 tcaatactttcatcatctttcattttga 25449677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 28137628 - 28137559
Alignment:
Q  10 agtttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggaga 79  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  28137628 agtttcaaaatgaagtagaaaaccaactaggcaagaaaatcaaaatgcttcgatctgatcgaggtggaga 28137559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 102 - 185
Target Start/End: Original strand, 27857342 - 27857426
Alignment:
Q  102 agaatcttgttcacacaatcagaagct-acataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||||||||| |||||||| || ||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||    
T  27857342 agaatcttgttcacataatcagaaacttacataacttttcttcagaacctgaagtccagagactagagtctgaaaccttgagtac 27857426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 23023402 - 23023540
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| |||||||||||| || |||||| | |||  ||||||||||||||| ||||||||||||||||||| ||| || |||||||| ||||| ||||    
T  23023402 catctagtaggtaagcttctgagtatcttgcttacatgatcagaagctacatagcttttcttcagtatttgaattcctgaaactagagtttgaaatcttg 23023501  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  23023502 agtacatttgc-tcaatactttcatcatctttcattttga 23023540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 21196251 - 21196113
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||||||| ||||||| |||||| ||||   |||| |||||||||| | |||||||||||||||||||||||  |||||||||| ||| ||||    
T  21196251 catctagaaggtaagtttcttagtatcttgctcacgtgatcaaaagctacatagcatttcttcagtatttgaagtccaggaactagagtctaaaatcttg 21196152  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |  | | ||| |||||| |||||||||| ||||    
T  21196151 agtacatttcctcaatactttcaacatctttcattttga 21196113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 22431522 - 22431418
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| |||||||||||||| ||  ||||| |||||  |||||| |||||||| |||||||||||||||| ||||||||  |||||||||| ||| ||||    
T  22431522 catcttgcaggtaagcttctaagtctcttgctcacatgatcagaggctacatagcttttcttcagtatttaaagtccaggaactagagtctaaaatcttg 22431423  T
Q  181 agtac 185  Q
    |||||    
T  22431422 agtac 22431418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 23975996 - 23975896
Alignment:
Q  85 tagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagta 184  Q
    ||||||| ||||| |||||||| || |||||   ||||||||||||||| ||||||||||| || ||||||||| | |||||||||||||||| ||||||    
T  23975996 tagcaggcaagctccttagaatattcttcacgtgatcagaagctacatagcttttcttcagaatctgaagtccatacactagagtctgaaaccctgagta 23975897  T
Q  185 c 185  Q
    |    
T  23975896 c 23975896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 51630720 - 51630595
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  51630720 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 51630621  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     |||  || || ||||||||||||||    
T  51630620 tcttctatactctcatcatctttcat 51630595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 4176595 - 4176691
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  4176595 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 4176691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 12615851 - 12615755
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  12615851 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 12615755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 12739821 - 12739917
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  12739821 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 12739917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 185
Target Start/End: Complemental strand, 20874745 - 20874657
Alignment:
Q  97 ttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||| ||||||||| | |||  ||||||||| |||| ||| |||||||||||||| |||||||| |||| ||| ||||| |||||||||    
T  20874745 ttctcagaatcttgcttacatgatcagaagcaacatgactcttcttcagtatttgcagtccagatactaaagtttgaaatcttgagtac 20874657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 21876441 - 21876537
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  21876441 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 21876537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 35639567 - 35639471
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  35639567 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 35639471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 36237958 - 36237862
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  36237958 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 36237862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 7516607 - 7516702
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttcgctttaatgctttcatcatctttcat 214  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |  |||  || || ||||||||||||||    
T  7516607 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatttcttctatactctcatcatctttcat 7516702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 22958640 - 22958755
Alignment:
Q  99 cttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttcgctttaatgc 198  Q
    ||||||||||| ||||||  ||||| | ||||||| ||||||||  | || |||||| |||| |||||| ||| ||||||||||||| | | || ||||     
T  22958640 cttagaatcttcttcacatgatcagcaactacatagcttttcttttgaatctgaagttcagaaactagattcttaaaccttgagtacatagtttcaatgt 22958739  T
Q  199 tttcatcatctttcat 214  Q
     |||||||||||||||    
T  22958740 cttcatcatctttcat 22958755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 19186528 - 19186594
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  19186528 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 19186594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 185
Target Start/End: Complemental strand, 7690968 - 7690903
Alignment:
Q  120 tcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  7690968 tcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 7690903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 3180894 - 3180990
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  3180894 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 3180990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 5641238 - 5641142
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||| |||||||| | |||||| |||| ||| ||||| |||||||||    
T  5641238 aggtaagcttctcaaaatcttactgacatgatcagaagcaacatagcttttctttagtatttgcaatccagaaactaaagtttgaaatcttgagtac 5641142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 5842497 - 5842593
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  5842497 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 5842593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 38093782 - 38093848
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  38093782 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 38093848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 38104408 - 38104474
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  38104408 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 38104474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 47609434 - 47609368
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  47609434 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 47609368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 18696516 - 18696380
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| |||||||||||||||||||||| | |||  |||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  18696516 catctagtaggtaagcttcttagaatcttgcttacatgatcagaagctacatcacttttcttcagtatttgaagtccatagactaaagtctgaaatcttg 18696417  T
Q  181 agtacttcgctttaatgctttcatcatctttcatctt 217  Q
    ||||| | || | ||| ||||||||||||||||||||    
T  18696416 agtacatagcctcaattctttcatcatctttcatctt 18696380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 14078937 - 14078799
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||||||||||||||| |||||| |||||  ||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||| ||||    
T  14078937 catctagaaggtaagcttcttagtatcttgctcacatgatcagaagctacatagcttttcttcaatatttgaagtccaaagactagagtttgaaatcttg 14078838  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |  | | ||| |||||||| |||||||||||||    
T  14078837 agtacattacctcaatactttcatcttctttcatcttga 14078799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 14908295 - 14908157
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||||||||||||||| |||||| |||||  ||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  14908295 catctagcaggtaagcttcttagtatcttgctcacatgatcagaagctacatagcttttcttaagtatttgaagtccagaaactagagtatgaaatcttg 14908196  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |  | | ||| ||| ||||||||||||| ||||    
T  14908195 agtacatttcctcaatacttccatcatctttcattttga 14908157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 21639381 - 21639518
Alignment:
Q  82 atctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttga 181  Q
    |||||||||||| |||| | || |||||| |||||  ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||    
T  21639381 atctagcaggtaggcttttaagtatcttgctcacatgatcagaagctacatagcttttcttcagtatttgaagtccagaaactagagtctgaaatcttga 21639480  T
Q  182 gtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    |||| || || | ||| ||||||||||||||||| ||||    
T  21639481 gtacatttgc-tcaatactttcatcatctttcattttga 21639518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 17244807 - 17244703
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| ||||||||||||||||  |||||| |||||  |||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  17244807 catcttgcaggtaagcttcttactatcttgctcacatgatcagaggctacatagcttttcttcagtatttgaagtccagaaactagagtctgaaatcttg 17244708  T
Q  181 agtac 185  Q
    |||||    
T  17244707 agtac 17244703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 53058341 - 53058203
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| |||||||||||||| || |||||  |||||  |||||| ||||||||||||||||||||||||||||||||| | |||||||||||||| |||     
T  53058341 catcttgcaggtaagcttctaagtatcttactcacatgatcagaggctacataacttttcttcagtatttgaagtccaaaaactagagtctgaaatcttt 53058242  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  53058241 agtacatttgc-tcaatactttcatcatctttcattttga 53058203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 12307152 - 12307220
Alignment:
Q  12 tttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggagaa 80  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  12307152 tttcaaaatgaagtagaaaaccaactaggcaagaaaatcaaaatgcttcgatctgatcgaggtggagaa 12307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 16306618 - 16306518
Alignment:
Q  85 tagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagta 184  Q
    ||||| ||||||| |||| |||||||||||||  |||| ||||||||||  |||||||||| || ||||||||| |||||||||||||||||||||||||    
T  16306618 tagcaagtaagctccttataatcttgttcacatgatcataagctacatagtttttcttcagaatctgaagtccaaagactagagtctgaaaccttgagta 16306519  T
Q  185 c 185  Q
    |    
T  16306518 c 16306518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 14952721 - 14952859
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    |||||| ||||||||||||| || ||||||||||||  |||| |||||| ||| |||||||| | ||||| ||||||||| |||||||||||||| ||||    
T  14952721 catctaacaggtaagcttctaagtatcttgttcacatgatcaaaagctaaatagcttttctttaatatttaaagtccagaaactagagtctgaaatcttg 14952820  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  14952821 agtacatttgc-tcaatactttcatcatctttcattttga 14952859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 11188542 - 11188672
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| || |||||  |||||  ||||||||| ||||| |||||||||||||||||| ||||||| |||||||||||||| ||||||||| |     
T  11188542 aggtaagcttctaagtatctttctcacatgatcagaagcaacatagcttttcttcagtatttgatgtccagaaactagagtctgaaatcttgagtacatt 11188641  T
Q  189 gctttaatgctttcatcatctttcatcttga 219  Q
       | ||| ||||||||||||||||| ||||    
T  11188642 ttctcaatactttcatcatctttcattttga 11188672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 19886698 - 19886600
Alignment:
Q  87 gcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||||| |||||| |||||  |||||| |||||||| |||||||||||||||||||||||| | |||||||||||||| ||| |||||    
T  19886698 gcaggtaagtttcttagtatcttgctcacatgatcagaggctacatagcttttcttcagtatttgaagtccaaaaactagagtctgaaatcttaagtac 19886600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 18123273 - 18123169
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| |||||||||||||| || |||||| ||| |  ||||||  |||||||||||||||||||||||||||||||||| |||||||| ||||| |||     
T  18123273 catcttgcaggtaagcttctaagtatcttgctcagatgatcagagactacataacttttcttcagtatttgaagtccagaaactagagtttgaaatcttt 18123174  T
Q  181 agtac 185  Q
    |||||    
T  18123173 agtac 18123169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 2559733 - 2559813
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagag 161  Q
    ||||| ||||||||||||||||| |||||| |||||  |||||| |||||||| |||||||||||||||| ||||||||||    
T  2559733 catcttgcaggtaagcttcttagtatcttgctcacatgatcagaggctacatagcttttcttcagtatttaaagtccagag 2559813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 1062878 - 1062982
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | ||   ||||||||| ||||||||||||||||||||||| |||||||| |||| ||| ||||| |||     
T  1062878 catctagaaggcaagcttctcagaatcttgctaacgtgatcagaagcaacataacttttcttcagtatttgcagtccagatactaaagtttgaaatctta 1062977  T
Q  181 agtac 185  Q
    |||||    
T  1062978 agtac 1062982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 185
Target Start/End: Original strand, 1462961 - 1463061
Alignment:
Q  85 tagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagta 184  Q
    ||||||||||||| |||||||| || ||||||  ||||| | ||||||||||||||||||  || | |||||||||   |||||||||||||||||||||    
T  1462961 tagcaggtaagctccttagaattttcttcacatgatcagcacctacataacttttcttcaaaatctaaagtccagatgttagagtctgaaaccttgagta 1463060  T
Q  185 c 185  Q
    |    
T  1463061 c 1463061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 8997445 - 8997341
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  ||||||||| ||||| || |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  8997445 catctagaaggcaagcttctcagaatcttgctaacatgatcagaagcaacatagctcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 8997346  T
Q  181 agtac 185  Q
    |||||    
T  8997345 agtac 8997341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 29935057 - 29934953
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  ||||||||| |||||||| |||||||||||||| |||||||| |||  ||| ||||| ||||    
T  29935057 catctagaaggcaagcttctcagaatcttgcttacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactcaagtttgaaatcttg 29934958  T
Q  181 agtac 185  Q
    |||||    
T  29934957 agtac 29934953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 29984211 - 29984107
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  ||||||||| |||||||| |||||||||||||| |||||||| |||  ||| ||||| ||||    
T  29984211 catctagaaggcaagcttctcagaatcttgcttacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactcaagtttgaaatcttg 29984112  T
Q  181 agtac 185  Q
    |||||    
T  29984111 agtac 29984107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 217
Target Start/End: Complemental strand, 15960914 - 15960820
Alignment:
Q  123 gaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttcgctttaatgctttcatcatctttcatctt 217  Q
    ||||||||||| |||||||||| |||||||| |||||||| ||||||||||||  |||||||| |  | | ||| |||||||||| |||||||||    
T  15960914 gaagctacatagcttttcttcaatatttgaattccagagaatagagtctgaaatgttgagtacatatcctcaatactttcatcatatttcatctt 15960820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 4432503 - 4432607
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| |||||||||||| ||||| ||| | |||  ||||||||  ||||| || |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  4432503 catctagaaggtaagcttctcagaattttgctaacatgatcagaagtaacatagctcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 4432602  T
Q  181 agtac 185  Q
    |||||    
T  4432603 agtac 4432607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 11221387 - 11221470
Alignment:
Q  136 ttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||||| ||||||||||||||||| |||||||||||||| ||||||||| || || | ||| ||||||||||||||||| ||||    
T  11221387 ttttctttagtatttgaagtccagaaactagagtctgaaatcttgagtacatttgc-tcaatactttcatcatctttcattttga 11221470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 15847637 - 15847741
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| || ||||| | ||||||| |||||  ||||||||| |||||||| |||||||||||||| | |||||| |||| ||| ||||| ||||    
T  15847637 catctagaaggcaaacttctcaaaatcttgctcacatgatcagaagcaacataactcttcttcagtatttgcattccagatactaaagtttgaaatcttg 15847736  T
Q  181 agtac 185  Q
    |||||    
T  15847737 agtac 15847741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 12754279 - 12754141
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| |  |||| | |||||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| |||     
T  12754279 catctagaaggaaagcttctcaatatctggctcacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatctta 12754180  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || |||  || || ||| |||| ||||||||||    
T  12754179 agtacatctcttctatactctcaccatccttcatcttga 12754141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 29462674 - 29462608
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||||||| ||||| |||||||||    
T  29462674 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactagagtttgaaatcttgagtac 29462608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 5211217 - 5211278
Alignment:
Q  82 atctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttc 143  Q
    ||||||||||||||||||| || |||||| |||||  ||||||||||||||| |||||||||    
T  5211217 atctagcaggtaagcttctaagtatcttgctcacatgatcagaagctacatagcttttcttc 5211278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 5581119 - 5580994
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  5581119 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacata 5581020  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     |||  || || ||||||||||||||    
T  5581019 tcttctatactctcatcatctttcat 5580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 6491832 - 6491707
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  6491832 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 6491733  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     ||| ||| || |||||||| |||||    
T  6491732 tcttcaatactctcatcatccttcat 6491707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 9983374 - 9983249
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  9983374 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 9983275  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     ||| ||| || |||||||| |||||    
T  9983274 tcttcaatactctcatcatccttcat 9983249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 12288466 - 12288341
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  12288466 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 12288367  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     |||  || || ||||||||||||||    
T  12288366 tcttctatactctcatcatctttcat 12288341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 1785571 - 1785467
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||  | |||  ||||||||  ||||| || |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  1785571 catctagaaggcaagcttctcagaatcttactaacatgatcagaagtaacatagctcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 1785472  T
Q  181 agtac 185  Q
    |||||    
T  1785471 agtac 1785467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 5538507 - 5538411
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  5538507 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 5538411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 6183452 - 6183356
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  6183452 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 6183356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 7796115 - 7796011
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||||| ||||||  | |||  ||||||| | ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||    
T  7796115 catctagaaggcaagcttcttaaaatcttactaacatgatcagaaccaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttg 7796016  T
Q  181 agtac 185  Q
    |||||    
T  7796015 agtac 7796011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 9382158 - 9382054
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||  | |||  ||||||||  ||||| || |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  9382158 catctagaaggcaagcttctcagaatcttactaacatgatcagaagtgacatagctcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 9382059  T
Q  181 agtac 185  Q
    |||||    
T  9382058 agtac 9382054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 13131021 - 13131117
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  13131021 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 13131117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 14474972 - 14475068
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  14474972 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 14475068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 16029549 - 16029653
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||| | ||||||||||| |||||  |||||  ||||||||| ||||| ||| | ||||||||||| |||| ||||||||  || ||||| ||||    
T  16029549 catctagcatgcaagcttcttagtatcttcctcacatgatcagaagcaacatagcttattttcagtatttgtagtctagagactaaggtttgaaatcttg 16029648  T
Q  181 agtac 185  Q
    |||||    
T  16029649 agtac 16029653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 16392534 - 16392438
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  16392534 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 16392438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 20674683 - 20674587
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  20674683 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 20674587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 23766645 - 23766741
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  23766645 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 23766741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 39381435 - 39381531
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  39381435 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 39381531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 13374153 - 13374058
Alignment:
Q  90 ggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  13374153 ggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 13374058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 13384747 - 13384652
Alignment:
Q  90 ggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  13384747 ggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 13384652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 19659089 - 19658992
Alignment:
Q  85 tagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagta 184  Q
    ||||||||||||| ||||||||||| |||| |  |||   ||||||||| ||||||||||| || |||||||||||   |||| ||||||||||| ||||    
T  19659089 tagcaggtaagctccttagaatcttcttcagatgatc---agctacatagcttttcttcagaatctgaagtccagatgttagattctgaaacctttagta 19658993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 10628434 - 10628309
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| || | ||| ||||| ||||||||| |     
T  10628434 aggtaagcttctcaaaatcttactgacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaaccaaagtttgaaatcttgagtacatt 10628335  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     ||| ||| || |||||||| |||||    
T  10628334 tcttcaatactctcatcatccttcat 10628309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 12239104 - 12238979
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||| ||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  12239104 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttattcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 12239005  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     ||| ||| || |||||||| |||||    
T  12239004 tcttcaatactctcatcatccttcat 12238979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 505656 - 505560
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  505656 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 505560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 4753070 - 4753166
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  4753070 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 4753166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 5519619 - 5519715
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  5519619 aggtaagcttctcaaaatcttactaacatgatcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 5519715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 5867182 - 5867086
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  |||||| || ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  5867182 aggtaagcttctcaaaatcttactaacatgatcagaggcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 5867086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 11207589 - 11207485
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||  | |||  || |||||  ||||| || |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  11207589 catctagaaggcaagcttctcagaatcttactaacatgattagaagtgacatagctcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 11207490  T
Q  181 agtac 185  Q
    |||||    
T  11207489 agtac 11207485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 19787773 - 19787869
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||| | ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  19787773 aggtaagcttctcaaaatcttactaacatgatcagaaacaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 19787869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 24385004 - 24384908
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  |||||| || ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  24385004 aggtaagcttctcaaaatcttactaacatgatcagaggcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 24384908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 24669221 - 24669317
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  |||||| || ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  24669221 aggtaagcttctcaaaatcttactaacatgatcagaggcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 24669317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 41693000 - 41693096
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  41693000 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 41693096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 16397476 - 16397381
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttcgctttaatgctttcatcatctttcat 214  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| || | ||| ||||| ||||||||| |  ||| ||| || |||||||| |||||    
T  16397476 atcagaagcaacatagcttttcttcagtatttgcaatccagaaaccaaagtttgaaatcttgagtacatttcttcaatactctcatcatccttcat 16397381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 8784044 - 8784110
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  8784044 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 8784110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 11273841 - 11273775
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  11273841 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 11273775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 28315694 - 28315628
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  28315694 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 28315628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 38204033 - 38204099
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  38204033 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 38204099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 181
Target Start/End: Complemental strand, 14312906 - 14312806
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||| ||| | |||  ||||||||  ||||| || |||||||||||||| |||| ||| |||| ||| ||||| ||||    
T  14312906 catctagaaggcaagcttctcagaattttgctaacatgatcagaagtaacatagctattcttcagtatttgcagtctagatactaaagtttgaaatcttg 14312807  T
Q  181 a 181  Q
    |    
T  14312806 a 14312806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 5e-37; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 16309322 - 16309184
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| | ||||||||||||||||||||||||||  || ||||||||||||  ||||||| ||||| |||||||||||||||||||||| |||||||     
T  16309322 catctaggatgtaagcttcttagaatcttgttcacatgattagaagctacatattttttctttagtatctgaagtccagagactagagtctaaaacctta 16309223  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| | || | ||||||||||||||||||||||||||    
T  16309222 agtacatagcctcaatgctttcatcatctttcatcttga 16309184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 13173838 - 13173700
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| ||||||||||||||||| |||||| |||||  ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  13173838 catcttgcaggtaagcttcttagtatcttgctcacatgatcagaagctacatagcttttcttcagtatttgaagtccagaaactagagtctgaaatcttg 13173739  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |    | ||| ||||||||||||||||| ||||    
T  13173738 agtacattttctcaatactttcatcatctttcattttga 13173700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 85 - 215
Target Start/End: Original strand, 15087486 - 15087616
Alignment:
Q  85 tagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagta 184  Q
    ||||||||||||| ||||||||||| ||||||  ||||  | ||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  15087486 tagcaggtaagctccttagaatcttcttcacatgatcaacaactacatagcttttctttagaatttgaagtccagagactagagtctgaaaccttgagta 15087585  T
Q  185 cttcgctttaatgctttcatcatctttcatc 215  Q
    | | || | |||||||||||  |||||||||    
T  15087586 catagcctcaatgctttcattctctttcatc 15087616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 13028551 - 13028413
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||||||||||||||| ||| || |||||  |||||| |||||||| || || |||||||||||||||||||| |||||||||||||| ||||    
T  13028551 catctagcaggtaagcttcttagtatcctgctcacatgatcagaggctacatagctcttattcagtatttgaagtccagaaactagagtctgaaatcttg 13028452  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  13028451 agtacatttgc-tcaatactttcatcatctttcattttga 13028413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 13878675 - 13878813
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| ||| ||||||||||||| |||||| |||||  |||||| ||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  13878675 catcttgcaagtaagcttcttagtatcttgctcacatgatcagaggcttcatagcttttcttcagtatttgaagtccagaaactagagtctgaaatcttg 13878774  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  13878775 agtacatttgc-tcaatactttcatcatctttcattttga 13878813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 21212206 - 21212068
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    |||||||||||||| |||||||| |||||  ||||   ||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||    
T  21212206 catctagcaggtaaacttcttagtatcttactcacttgatcagaagctacatagcttttcttcaatatttgaagtccagaaactagagtctgaaatcttg 21212107  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  21212106 agtacatttgc-tcaatactttcatcatctttcattttga 21212068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 16408331 - 16408469
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    |||||||||||||||||||| || |||||| |||||  |||||||||||||||  ||||||| | ||||| |||||||||||||| ||||| ||| ||||    
T  16408331 catctagcaggtaagcttctcagtatcttgctcacatgatcagaagctacatagattttctttaatatttaaagtccagagactaaagtctaaaatcttg 16408430  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |  | | ||| ||||||||||||||||||||||    
T  16408431 agtacatttcctcaatactttcatcatctttcatcttga 16408469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 16311603 - 16311499
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| |||||||| |||||||| |||||| |||||  |||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||    
T  16311603 catcttgcaggtaaacttcttagtatcttgctcacatgatcagaggctacatagcttttcttcagtatttgaagtctagaaactagagtctgaaatcttg 16311504  T
Q  181 agtac 185  Q
    |||||    
T  16311503 agtac 16311499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 16547621 - 16547483
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| |||||||||||||| || |||||| |||||  |||||| |||||||| |||||||| ||||||||||||||||| ||| |||||||||| ||||    
T  16547621 catcttgcaggtaagcttctaagtatcttgctcacatgatcagaggctacatagcttttctttagtatttgaagtccagaaacttgagtctgaaatcttg 16547522  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  16547521 agtacatttgc-tcaatactttcatcatctttcattttga 16547483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 16618041 - 16618179
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| |||||||||||||| || |||||| |||||  |||||| |||||||| |||||||| ||||||||||||||||| ||| |||||||||| ||||    
T  16618041 catcttgcaggtaagcttctaagtatcttgctcacatgatcagaggctacatagcttttctttagtatttgaagtccagaaacttgagtctgaaatcttg 16618140  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  16618141 agtacatttgc-tcaatactttcatcatctttcattttga 16618179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 16106631 - 16106538
Alignment:
Q  92 taagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||| ||||| ||| | ||||||  ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||    
T  16106631 taagctccttagtatccttttcacatgatcagaagctacataacttttcttcagaatctgaagtccagagactagagtctgaaaccatgagtac 16106538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 18404487 - 18404555
Alignment:
Q  12 tttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggagaa 80  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  18404487 tttcaaaatgaagtagaaaaccaactaggcaagaaaatcaaaatgcttcgatctgatcgaggtggagaa 18404555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 14172196 - 14172334
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    |||||||||||||||||| | || |||||  |||||  |||| | |||||||| |||||||||||||||||||||| ||| ||||||||||||||  |||    
T  14172196 catctagcaggtaagcttttaagtatctttctcacatgatcataggctacatagcttttcttcagtatttgaagtctagaaactagagtctgaaattttg 14172295  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||||||||    
T  14172296 agtacatttgc-tcaatactttcatcatctttcatcttga 14172334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 4413591 - 4413487
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| ||||||| |||||| || |||||| |||||  |||||| |||||||| ||||||||| |||||||||||||||| || ||||||||||| ||||    
T  4413591 catctggcaggtaggcttctgagtatcttgctcacatgatcagaggctacatagcttttcttcggtatttgaagtccagaaaccagagtctgaaatcttg 4413492  T
Q  181 agtac 185  Q
    |||||    
T  4413491 agtac 4413487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 18439920 - 18440058
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | ||   ||||||||| ||||||||||||||||||||||| |||||||| |||| ||| ||||| ||||    
T  18439920 catctagaaggcaagcttctcagaatcttgctaacgtgatcagaagcaacataacttttcttcagtatttgcagtccagatactaaagtttgaaatcttg 18440019  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | |  || || |||||||| ||||||||||    
T  18440020 agtacatctcctatatactctcatcatccttcatcttga 18440058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 219
Target Start/End: Original strand, 15466301 - 15466433
Alignment:
Q  87 gcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtact 186  Q
    |||||||||||||| || |||||  |||||  |||||| |||||||| |||||||| ||||||||||||||| | | |||||||||||| |||||||||     
T  15466301 gcaggtaagcttctaagtatctttctcacatgatcagaggctacatagcttttctttagtatttgaagtccataaattagagtctgaaatcttgagtaca 15466400  T
Q  187 tcgctttaatgctttcatcatctttcatcttga 219  Q
    |    | ||| ||||||||||||||||| ||||    
T  15466401 tgtgctaaatactttcatcatctttcattttga 15466433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 13680922 - 13681011
Alignment:
Q  130 cataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||| || || | ||| ||||||||||||||||| ||||    
T  13680922 catagcttttcttcagtatttgaagtccagaaactagagtatgaaatcttgagtacatttgc-tcaatactttcatcatctttcattttga 13681011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 4221341 - 4221437
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||||| ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  4221341 aggtaagcttcttaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 4221437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 176223 - 176319
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  176223 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 176319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 458556 - 458460
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  458556 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 458460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 2707183 - 2707087
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  2707183 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 2707087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 6868800 - 6868704
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  6868800 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 6868704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 8626678 - 8626774
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  8626678 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 8626774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 11003912 - 11004008
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  11003912 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 11004008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 15879400 - 15879296
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||    
T  15879400 catctagaaggcaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttg 15879301  T
Q  181 agtac 185  Q
    |||||    
T  15879300 agtac 15879296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 17951684 - 17951588
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  17951684 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 17951588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 22098474 - 22098570
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  22098474 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 22098570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 20988420 - 20988486
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  20988420 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 20988486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 1996889 - 1996985
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  1996889 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 1996985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 24743434 - 24743530
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  24743434 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 24743530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 26391664 - 26391568
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  |||||| || ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  26391664 aggtaagcttctcaaaatcttactaacatgatcagaggcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 26391568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 40043674 - 40043578
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  40043674 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 40043578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 42875181 - 42875277
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  42875181 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 42875277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 8003606 - 8003540
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  8003606 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 8003540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 9093750 - 9093816
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  9093750 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 9093816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 11014551 - 11014617
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  11014551 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 11014617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 26654876 - 26654810
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  26654876 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 26654810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 9168906 - 9169010
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||  | |||  ||||||||  ||||| || |||||||||||||| ||||| || |||| ||| ||||| || |    
T  9168906 catctagaaggcaagcttctcagaatcttactaacatgatcagaagtgacatagctcttcttcagtatttgcagtccggatactaaagtttgaaatctag 9169005  T
Q  181 agtac 185  Q
    |||||    
T  9169006 agtac 9169010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 26763994 - 26764132
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    |||||||||||||||||||| || |||||| |||||  ||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| ||||    
T  26763994 catctagcaggtaagcttctaagtatcttgctcacatgatcagaagctacatagcttttcttcagtatttaaagtccagaaactagagtctgaaatcttg 26764093  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||||||||||||||||||||| ||||    
T  26764094 agtacatttgc-tcaatgctttcatcatctttcattttga 26764132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 21200619 - 21200481
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||||||||||  ||| |||||| |||||  ||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| ||||    
T  21200619 catctagtaggtaagctttatagtatcttgctcacatgatcagaagctacatagcttttcttcagtatttgaagtctagaaactagagtctgaaatcttg 21200520  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |   || ||| |||||||||| |||||| ||||    
T  21200519 agtacatttgttcaatactttcatcatatttcattttga 21200481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 31144911 - 31144781
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac-tt 187  Q
    ||||| |||||| || |||||| |||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||    
T  31144911 aggtaggcttctgagtatcttgctcacatgatcagaagctacagaacttttcttcagtatttgaagtccagaaactagagtttgaaatcttgagtacatt 31144812  T
Q  188 cgctttaatgctttcatcatctttcatcttga 219  Q
     || | ||| ||||||||||||||||| ||||    
T  31144811 tgc-tcaatactttcatcatctttcattttga 31144781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 20936435 - 20936503
Alignment:
Q  12 tttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggagaa 80  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  20936435 tttcaaaatgaagtagaaaaccaactaggcaagaaaatcaaaatgcttcgatctgatcgaggtggagaa 20936503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 219
Target Start/End: Original strand, 13532524 - 13532650
Alignment:
Q  93 aagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttcgctt 192  Q
    |||||||| ||||||||| | |||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||||||| || | |    
T  13532524 aagcttctcagaatcttgcttacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttgagtacatctcct 13532623  T
Q  193 taatgctttcatcatctttcatcttga 219  Q
      || || |||||||| ||||||||||    
T  13532624 ctatactctcatcatccttcatcttga 13532650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 17455957 - 17456095
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| |||||||||||||||||| ||| | |||  ||||||||  ||||| || |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  17455957 catctagaaggtaagcttcttagaattttgctaacatgatcagaagtaacatagctcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 17456056  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | |  || || |||||||| ||||||||||    
T  17456057 agtacatctcctctatactctcatcatccttcatcttga 17456095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 23487138 - 23487276
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| | ||||||  |||||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  23487138 catctagaaggcaagcttctcaaaatcttactcacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 23487237  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |  |||  || || |||||||| ||||||||||    
T  23487238 agtacatttcttctatactctcatcatccttcatcttga 23487276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 25113515 - 25113377
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| |  |||||| |||||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  25113515 catctagaaggcaagcttctcaatatcttgctcacatgatcagaagcaacataactcttcttcagtatttgtagtccagatactaaagtttgaaatcttg 25113416  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || |||  || || |||||||| ||||| ||||    
T  25113415 agtacatctcttctatactctcatcatccttcattttga 25113377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 25172606 - 25172468
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| |  |||||| |||||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  25172606 catctagaaggcaagcttctcaatatcttgctcacatgatcagaagcaacataactcttcttcagtatttgtagtccagatactaaagtttgaaatcttg 25172507  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || |||  || || |||||||| ||||| ||||    
T  25172506 agtacatctcttctatactctcatcatccttcattttga 25172468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 19465589 - 19465485
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| |||||| ||||| ||||||||| | |||  ||||||||| ||||||||||||||||||||||| | || ||| |||| ||| ||||| ||||    
T  19465589 catctagaaggtaaacttctcagaatcttgcttacatgatcagaagcaacataacttttcttcagtatttgcaatctagaaactaaagtttgaaatcttg 19465490  T
Q  181 agtac 185  Q
    |||||    
T  19465489 agtac 19465485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 21704608 - 21704712
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  ||||||||  ||||| || |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  21704608 catctagaaggcaagcttctcagaatcttgctaacatgatcagaagtaacatagctcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 21704707  T
Q  181 agtac 185  Q
    |||||    
T  21704708 agtac 21704712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 184
Target Start/End: Original strand, 26782958 - 26783061
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| ||||||||||||||||| |||||| ||||   |||||| |||||||| |||||| | ||||||||||||||||    |||||| ||||| ||||    
T  26782958 catcttgcaggtaagcttcttagtatcttgctcacttgatcagaggctacatagcttttcattagtatttgaagtccagtacttagagtttgaaatcttg 26783057  T
Q  181 agta 184  Q
    ||||    
T  26783058 agta 26783061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 20553432 - 20553294
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  |||| |||  ||||| || |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  20553432 catctagaaggcaagcttctgagaatcttgctaacatgatcaaaagtaacatagctcttcttcagtatttgtagtccagatactaaagtttgaaatcttg 20553333  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | |  || || |||||||| ||||||||||    
T  20553332 agtacatctcctctatactctcatcatccttcatcttga 20553294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 6977415 - 6977290
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  6977415 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 6977316  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     |||  || || ||||||||||||||    
T  6977315 tcttctatactctcatcatctttcat 6977290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 22677725 - 22677600
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  22677725 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 22677626  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     |||  || || ||||||||||||||    
T  22677625 tcttctatactctcatcatctttcat 22677600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 23297886 - 23297761
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  23297886 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 23297787  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     |||  || || ||||||||||||||    
T  23297786 tcttctatactctcatcatctttcat 23297761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 39500139 - 39500264
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  39500139 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 39500238  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     |||  || || ||||||||||||||    
T  39500239 tcttctatactctcatcatctttcat 39500264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 9337563 - 9337467
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  9337563 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 9337467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 14031651 - 14031555
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  14031651 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 14031555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 23363705 - 23363609
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  23363705 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 23363609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 23394026 - 23393922
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||  | |||  ||||||||  ||||| || |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  23394026 catctagaaggcaagcttctcagaatcttactaacatgatcagaagtaacatagctcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 23393927  T
Q  181 agtac 185  Q
    |||||    
T  23393926 agtac 23393922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 23698389 - 23698293
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  23698389 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 23698293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 30236678 - 30236774
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  30236678 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 30236774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 31835089 - 31834993
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  31835089 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 31834993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 36591769 - 36591865
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  36591769 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 36591865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 39354105 - 39354009
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  39354105 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 39354009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 40391967 - 40391871
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  40391967 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 40391871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 1120584 - 1120650
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  1120584 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 1120650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 5299824 - 5299890
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  5299824 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 5299890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 27621454 - 27621520
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  27621454 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 27621520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 34773488 - 34773422
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  34773488 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 34773422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 42044359 - 42044293
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  42044359 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 42044293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 14567305 - 14567401
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  |||||| || ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  14567305 aggtaagcttctcaaaatcttactaacatgatcagaggcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 14567401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 15741578 - 15741482
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  15741578 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 15741482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 17608671 - 17608575
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  17608671 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 17608575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 17720527 - 17720431
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  17720527 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 17720431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 22148125 - 22148029
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||| | |||| ||| ||||| |||||||||    
T  22148125 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccaaaaactaaagtttgaaatcttgagtac 22148029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 24568697 - 24568601
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  24568697 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 24568601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 24826127 - 24826223
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  24826127 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 24826223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 27051489 - 27051585
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  27051489 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 27051585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 27461771 - 27461675
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  |||||| || ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  27461771 aggtaagcttctcaaaatcttactaacatgatcagaggcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 27461675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 31350143 - 31350047
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  31350143 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 31350047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 35217112 - 35217016
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  35217112 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 35217016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 36689307 - 36689211
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  36689307 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 36689211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 43620538 - 43620642
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | || ||| |||| ||| ||||| ||||    
T  43620538 catctagaaggcaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatctagaaactaaagtttgaaatcttg 43620637  T
Q  181 agtac 185  Q
    |||||    
T  43620638 agtac 43620642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 14456294 - 14456360
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  14456294 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 14456360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 16002578 - 16002644
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| |||||  |||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  16002578 atcagaagcaacatagtttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 16002644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 24809495 - 24809429
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  24809495 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 24809429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 37739249 - 37739315
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  37739249 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 37739315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 24982054 - 24982158
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||  | |||  ||||||||  ||||| || |||||||||||||| ||||| || |||| ||| ||||| || |    
T  24982054 catctagaaggcaagcttctcagaatcttactaacatgatcagaagtgacatagctcttcttcagtatttgcagtccggatactaaagtttgaaatctag 24982153  T
Q  181 agtac 185  Q
    |||||    
T  24982154 agtac 24982158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 81 - 211
Target Start/End: Original strand, 7190 - 7320
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||||||||||||||| |||||| |||||  ||||||||||||||| |||||||||||||||||||||||| | |||||||||||||| ||||    
T  7190 catctagcaggtaagcttcttagtatcttgctcacaggatcagaagctacatagcttttcttcagtatttgaagtccaaaaactagagtctgaaatcttg 7289  T
Q  181 agtacttcgctttaatgctttcatcatcttt 211  Q
    ||||| |  | | ||| ||||||||||||||    
T  7290 agtacatttcctcaatactttcatcatcttt 7320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 34402 - 34336
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| || |||||||||||||| |||||||| |||| ||| ||||| |||||||||    
T  34402 atcagaagtaacatagctcttcttcagtatttgcagtccagatactaaagtttgaaatcttgagtac 34336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 27222 - 27084
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||||| |||||| || |||||| |||||  ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  27222 catctagcaggtaggcttctgagtatcttgctcacatgatcagaatctacataacttttcttcagtatttgaagtccagaaactagagtctgaaatcttg 27123  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  27122 agtacatttgc-tcaatactttcatcatctttcattttga 27084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 17015094 - 17015232
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| ||||||||||||||||| |||||| |||||  ||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| ||||    
T  17015094 catcttgcaggtaagcttcttagtatcttgctcacatgatcagaagctacatagcttttcttcagtatttaaagtccagaaactagagtctgaaatcttg 17015193  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  17015194 agtacatttgc-tcaatactttcatcatctttcattttga 17015232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 17542107 - 17541969
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| ||||||||||||||||| |||||| |||||  ||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||| ||||    
T  17542107 catcttgcaggtaagcttcttagtatcttgctcacatgatcagaagctacatagcttttcttcagtatttaaagtccagaaactagagtctgaaatcttg 17542008  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  17542007 agtacatttgc-tcaatactttcatcatctttcattttga 17541969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 25164803 - 25164907
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| ||||||||||||||||| |||||| |||||  ||||||| ||||||| |||||||||||||||| ||||||||| |||||||||||||| ||||    
T  25164803 catcttgcaggtaagcttcttagtatcttgctcacatgatcagaaactacatagcttttcttcagtatttaaagtccagaaactagagtctgaaatcttg 25164902  T
Q  181 agtac 185  Q
    |||||    
T  25164903 agtac 25164907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 15976874 - 15977012
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| ||||||||||||||||| |||||| |||||  |||||| |||||||| |||||||||||||||||||||||| | |||||||| ||||| ||||    
T  15976874 catcttgcaggtaagcttcttagtatcttgctcacatgatcagaggctacatagcttttcttcagtatttgaagtccataaactagagtatgaaatcttg 15976973  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  15976974 agtacatttgc-tcaatactttcatcatctttcattttga 15977012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 22463076 - 22462938
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||||||||||||||| |||||| |||||  |||||| |||||||| ||||||||||||| |||||||||||| | |||||| ||||| |||     
T  22463076 catctagcaggtaagcttcttagtatcttggtcacatgatcagatgctacatagcttttcttcagtacttgaagtccagatagtagagtttgaaatctta 22462977  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||||||||    
T  22462976 agtacatttgc-tcaatactttcatcatctttcatcttga 22462938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 19941763 - 19941901
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||| ||||| ||||| |||||| | |||  ||||||||| |||||||| || ||||||||||| |||||||||||||| || ||||||||||    
T  19941763 catctagcaggcaagctccttagtatcttgctaacatgatcagaagcaacataactctttttcagtatttgtagtccagagactagggtttgaaaccttg 19941862  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | | |||  |||||||||| ||||||||||    
T  19941863 agtacatctcctcaatagtttcatcatccttcatcttga 19941901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 27010420 - 27010352
Alignment:
Q  12 tttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggagaa 80  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27010420 tttcaaaatgaagtagaaaaccaactaggcaagaaaatcaaaatgcttcgatctgatcgaggtggagaa 27010352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 20257182 - 20257078
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| ||||| ||||||||||| |||||  |||||  ||||||||||||| |||||||||||||||||||||||| ||| |||| ||||||||| | ||    
T  20257182 catcttgcaggaaagcttcttagtatctttctcacatgatcagaagctacacaacttttcttcagtatttgaagtctagaaactaaagtctgaaatcatg 20257083  T
Q  181 agtac 185  Q
    |||||    
T  20257082 agtac 20257078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 22672321 - 22672425
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    |||||||||||||||||||| || |||||| |||||  |||||||||||||||  |||||||| |||||| ||| ||||| |||||||||||||| |||     
T  22672321 catctagcaggtaagcttctaagtatcttgctcacatgatcagaagctacatagattttcttcggtatttaaagcccagaaactagagtctgaaatctta 22672420  T
Q  181 agtac 185  Q
    |||||    
T  22672421 agtac 22672425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 17287780 - 17287642
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| |||||||||||||| || |||||  |||||  |||||| |||||||| |||||||||||||||| |||| |||| |||||||| ||||| ||||    
T  17287780 catcttgcaggtaagcttctaagtatctttctcacatgatcagaggctacatagcttttcttcagtatttaaagttcagaaactagagtatgaaatcttg 17287681  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  17287680 agtacatttgc-tcaatactttcatcatctttcattttga 17287642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 3842273 - 3842411
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  3842273 catctagaaggcaagcttctcagaatcttgcttacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 3842372  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | |  || || |||||||| ||||||||||    
T  3842373 agtacatctcctctatactctcatcatccttcatcttga 3842411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 21297467 - 21297603
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| |  |||||| |||||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  21297467 catctagaaggcaagcttctcaatatcttgctcacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 21297566  T
Q  181 agtacttcgctttaatgctttcatcatctttcatctt 217  Q
    ||||| || |||  || || |||||||| ||||||||    
T  21297567 agtacatctcttctatactctcatcatccttcatctt 21297603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 23791976 - 23792114
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  ||||||||| |||||||| |||||||||||||| ||| |||| |||| ||| ||||| ||||    
T  23791976 catctagaaggcaagcttctcagaatcttgcttacatgatcagaagcaacataactcttcttcagtatttgcagtacagatactaaagtttgaaatcttg 23792075  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |  |||  || || |||||||| ||||||||||    
T  23792076 agtacatttcttctatactctcatcatccttcatcttga 23792114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 156
Target Start/End: Original strand, 19940630 - 19940705
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtc 156  Q
    |||||| ||||||||||||| || |||||| |||||  || |||||||||||| ||||||||||||||||||||||    
T  19940630 catctaacaggtaagcttctgagtatcttgctcacatgattagaagctacatagcttttcttcagtatttgaagtc 19940705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 45569563 - 45569425
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| |  |||||| || ||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  45569563 catctagaaggcaagcttctcaatatcttgctcgcatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 45569464  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |  |||  || || |||||||| ||||||||||    
T  45569463 agtacatttcttctatactctcatcatccttcatcttga 45569425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 24666976 - 24667072
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| |||||||||||||||| |  || || ||||||||| ||||||||||| || |||| || | |||||||| |||||||| ||||||||    
T  24666976 aggtaagctccttagaatcttgttcaaatgattaggagctacatagcttttcttcagaatctgaactcgaaagactagattctgaaacgttgagtac 24667072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 36302278 - 36302403
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  36302278 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 36302377  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     |||  || || ||||||||||||||    
T  36302378 tcttctatactctcatcatctttcat 36302403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 15782232 - 15782136
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  15782232 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 15782136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 19234122 - 19234226
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||    
T  19234122 catctagaaggcaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttg 19234221  T
Q  181 agtac 185  Q
    |||||    
T  19234222 agtac 19234226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 19427666 - 19427770
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||    
T  19427666 catctagaaggcaagcttctcaaaatcttactaacatgatcagaagcaacatatcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttg 19427765  T
Q  181 agtac 185  Q
    |||||    
T  19427766 agtac 19427770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 26119662 - 26119758
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  26119662 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 26119758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 29075492 - 29075588
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  29075492 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 29075588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 29085743 - 29085839
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  29085743 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 29085839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 32079217 - 32079121
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  32079217 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 32079121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 19138062 - 19138128
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  19138062 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 19138128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 30316216 - 30316150
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  30316216 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 30316150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 251160 - 251256
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  251160 aggtaagcttctcaaaatcttactaacatgatcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 251256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 814261 - 814357
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  814261 aggtaagcttctcaaaatcttactaacatgatcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 814357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 3350156 - 3350060
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  |||||| || ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  3350156 aggtaagcttctcaaaatcttactaacatgatcagaggcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 3350060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 9367046 - 9367142
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  |||||| || ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  9367046 aggtaagcttctcaaaatcttactaacatgatcagaggcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 9367142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 16745745 - 16745849
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||  | |||  ||||||||  ||||| || |||||||||||||| |||||| | |||| ||| ||||| ||||    
T  16745745 catctagaaggcaagcttctcagaatcttactaacatgatcagaagtaacatagctcttcttcagtatttgcagtccaaatactaaagtttgaaatcttg 16745844  T
Q  181 agtac 185  Q
    |||||    
T  16745845 agtac 16745849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 36087274 - 36087370
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  36087274 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 36087370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 44490466 - 44490562
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  44490466 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 44490562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 13690061 - 13689995
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  13690061 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 13689995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 111173 - 111069
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    |||||||||||||||||||| || ||||||||||||  |||||||||||||||  ||||||||||||||||||||||| | |||||||||||||| ||||    
T  111173 catctagcaggtaagcttctaagtatcttgttcacatgatcagaagctacatagattttcttcagtatttgaagtccataaactagagtctgaaatcttg 111074  T
Q  181 agtac 185  Q
    |||||    
T  111073 agtac 111069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 19874411 - 19874542
Alignment:
Q  82 atctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttga 181  Q
    |||||||||||||| |||| | ||||||  |||||  ||||||||| | |||||||||||||| ||||||||||||| |||||||||||||||| |||||    
T  19874411 atctagcaggtaagattctcaaaatctttctcacattatcagaagcaatataacttttcttcaatatttgaagtccatagactagagtctgaaatcttga 19874510  T
Q  182 gtacttcgctttaatgctttcatcatctttca 213  Q
    |||| | || ||||| ||||||||||||||||    
T  19874511 gtacatagccttaatactttcatcatctttca 19874542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 17926319 - 17926457
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||| || ||||| |  |||||| ||| |  ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  17926319 catctagcaggaaaacttctcaatatcttgctcaaatgatcagaagcaacataacttttcttcagtatttgaagtccagagactagggtctgaaatcttg 17926418  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |  | | ||| ||||||||||| ||||||||||    
T  17926419 agtacatttcctcaatactttcatcatccttcatcttga 17926457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 13137986 - 13137903
Alignment:
Q  84 ctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactaga 167  Q
    ||||||||||||||||||||||||||| |||||  ||||||| || |||||||||||||||||| |||||||||||||||||||    
T  13137986 ctagcaggtaagcttcttagaatcttgctcacatgatcagaaactgcataacttttcttcagtaattgaagtccagagactaga 13137903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 17062918 - 17063056
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| |||||  ||||||||| |||||||||||||||||||||||||||||||| ||||  || ||||| ||||    
T  17062918 catctagaaggcaagcttctcagaatcttgctcacatgatcagaagcaacataacttttcttcagtatttgaagtccagatactaaggtttgaaatcttg 17063017  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | |  || || |||||||| ||||||||||    
T  17063018 agtacatctcctctatactctcatcatccttcatcttga 17063056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 17447258 - 17447120
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    |||||||||||||||||| | | ||||||  |||||  || ||||||||||||||||||||||  |||||||||||||||||||| ||||||||| ||||    
T  17447258 catctagcaggtaagcttatcataatcttactcacatgataagaagctacataacttttcttccatatttgaagtccagagactatagtctgaaatcttg 17447159  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| | || | ||| ||||| |||| |||| ||||||    
T  17447158 agtacatagcctcaatactttcgtcatttttcttcttga 17447120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 27521388 - 27521320
Alignment:
Q  12 tttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggagaa 80  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27521388 tttcaaaatgaagtagaaaaccaactaggcaagaaaatcaaaatgcttcgatctgatcgaggtggagaa 27521320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 17610098 - 17609960
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  17610098 catctagaaggcaagcttctcagaatcttgcttacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 17609999  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | |  || || |||||||| ||||||||||    
T  17609998 agtacatctcctctatactctcatcatccttcatcttga 17609960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 219
Target Start/End: Original strand, 22307528 - 22307628
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttcgctttaatgctttcatcatctttcatcttg 218  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||| ||| ||||| ||||||||| || | |  || || |||||||| |||||||||    
T  22307528 atcagaagcaacataacttttcttcagtatttgcagtccagatactaaagtttgaaatcttgagtacatctcctctatactctcatcatccttcatcttg 22307627  T
Q  219 a 219  Q
    |    
T  22307628 a 22307628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 26940939 - 26941043
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||||||||||||||  |||||| ||| |  |||  ||||||||||  | |||||||||||||||||| || | |||||||||||||| ||||    
T  26940939 catctagcaggtaagcttcttaatatcttgctcaaatgatctaaagctacatacttgttcttcagtatttgaagttcataaactagagtctgaaatcttg 26941038  T
Q  181 agtac 185  Q
    |||||    
T  26941039 agtac 26941043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 11204669 - 11204799
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||| | |||  ||||||||| |||||||| |||||||||||||| |||||||| | || ||| ||||| ||||||||| ||    
T  11204669 aggtaagcttctcaaaatcttgcttacatgatcagaagcaacataactcttcttcagtatttgcagtccagatattaaagtttgaaatcttgagtacatc 11204768  T
Q  189 gctttaatgctttcatcatctttcatcttga 219  Q
     | |  || || |||||||| ||||||||||    
T  11204769 tcctctatactctcatcatccttcatcttga 11204799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 18553986 - 18554124
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| | ||||||| | |||  ||||||||| |||||||| |||||||||||||| | |||||| |||| ||| ||||| ||||    
T  18553986 catctagaaggcaagcttctcataatcttgcttacatgatcagaagcaacataactcttcttcagtatttgcattccagatactaaagtttgaaatcttg 18554085  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | |  || || |||||||| ||||||||||    
T  18554086 agtacatctcctctatactctcatcatccttcatcttga 18554124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 19448610 - 19448684
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagt 155  Q
    ||||||||||||||||||||||| |||||| |||||  ||||||||| ||||| | | |||||||||||||||||    
T  19448610 catctagcaggtaagcttcttagtatcttgctcacatgatcagaagcgacatagcgtatcttcagtatttgaagt 19448684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 155
Target Start/End: Original strand, 19450604 - 19450678
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagt 155  Q
    ||||||||||||||||||||||| |||||| |||||  ||||||||| ||||| | | |||||||||||||||||    
T  19450604 catctagcaggtaagcttcttagtatcttgctcacatgatcagaagcgacatagcgtatcttcagtatttgaagt 19450678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 22385305 - 22385443
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| |  |||||  |||||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  22385305 catctagaaggcaagcttctcaatatctttctcacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 22385404  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || |||  || || |||||| | ||||||||||    
T  22385405 agtacatctcttctatactctcatcacccttcatcttga 22385443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 12864236 - 12864332
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  12864236 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 12864332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 20031425 - 20031321
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||    
T  20031425 catctagaaggcaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttg 20031326  T
Q  181 agtac 185  Q
    |||||    
T  20031325 agtac 20031321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 25984782 - 25984878
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  25984782 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 25984878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 26874107 - 26874203
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  26874107 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 26874203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 32963442 - 32963346
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  32963442 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 32963346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 34808658 - 34808562
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  34808658 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 34808562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 9113959 - 9113893
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  9113959 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 9113893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 27383442 - 27383567
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| || | ||| ||||| ||||||||| |     
T  27383442 aggtaagcttctcaaaatcttactgacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaaccaaagtttgaaatcttgagtacatt 27383541  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     ||| ||| || |||||||| |||||    
T  27383542 tcttcaatactctcatcatccttcat 27383567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 27473826 - 27473951
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| || | ||| ||||| ||||||||| |     
T  27473826 aggtaagcttctcaaaatcttactgacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaaccaaagtttgaaatcttgagtacatt 27473925  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     ||| ||| || |||||||| |||||    
T  27473926 tcttcaatactctcatcatccttcat 27473951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 27503009 - 27503134
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||| ||||| | |||||| |||| ||| ||||| ||||||||| |     
T  27503009 aggtaagcttctcaaaatcttactgacatgatcagaagcaacatagcttttcttcagaatttgcaatccagaaactaaagtttgaaatcttgagtacatt 27503108  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     ||| ||| || |||||||| |||||    
T  27503109 tcttcaatactctcatcatccttcat 27503134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 3670749 - 3670845
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||| |||||||| | |||||| |||| ||| ||||| |||||||||    
T  3670749 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttctttagtatttgcaatccagaaactaaagtttgaaatcttgagtac 3670845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 14054898 - 14054794
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| | ||| ||| | |||  ||||||||| |||||||| || ||||||||||| |||| ||||||||  || | ||||||||    
T  14054898 catctagaaggcaagcttctcaaaattttgctgacatgatcagaagcaacataactctttttcagtatttgtagtctagagactaaggtttaaaaccttg 14054799  T
Q  181 agtac 185  Q
    |||||    
T  14054798 agtac 14054794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 25804365 - 25804469
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||  | |||  ||||||||  ||||| || |||||||||||||| |||||||| ||||  || ||||| ||||    
T  25804365 catctagaaggcaagcttctcagaatcttactaacatgatcagaagtgacatagctcttcttcagtatttgcagtccagatactaaggtttgaaatcttg 25804464  T
Q  181 agtac 185  Q
    |||||    
T  25804465 agtac 25804469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 26034725 - 26034821
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  26034725 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 26034821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 27351050 - 27351146
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  27351050 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 27351146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 27411790 - 27411886
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  27411790 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 27411886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 32302542 - 32302446
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  32302542 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 32302446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 21996976 - 21997035
Alignment:
Q  20 tgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggaga 79  Q
    ||||||||||||||||||||| ||||| || |||||| ||| || |||||||||| ||||    
T  21996976 tgaagtagaaaaccaactaggaaagaaaataaaaatgattcgatttgatcgaggtagaga 21997035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 12718302 - 12718236
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  12718302 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 12718236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 16958343 - 16958409
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  16958343 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 16958409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 26042900 - 26043025
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| || | ||| ||||| | ||||||| |     
T  26042900 aggtaagcttctcaaaatcttactgacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaaccaaagtttgaaatcctgagtacatt 26042999  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     ||| ||| || |||||||| |||||    
T  26043000 tcttcaatactctcatcatccttcat 26043025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 87 - 185
Target Start/End: Complemental strand, 6986 - 6888
Alignment:
Q  87 gcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| || ||||||| ||||||  ||||||||| ||||||||||    
T  6986 gcaggtaagcttcttagaatcttgttcacataatcagaagctacataactttccttcagaatctgaagtcaagagaccggagtctgaacccttgagtac 6888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 214
Target Start/End: Original strand, 1736 - 1869
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| ||||||||||||||||| |||||| |||||  ||||||||||||||| || |||||| |||||||||||||||| |||||||||||||| ||||    
T  1736 catcttgcaggtaagcttcttagtatcttgctcacatgatcagaagctacatagctcttcttcggtatttgaagtccagaaactagagtctgaaatcttg 1835  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcat 214  Q
    ||||| || || | ||| |||||||||||||||||    
T  1836 agtacatttgc-tcaatactttcatcatctttcat 1869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 209942 - 210076
Alignment:
Q  84 ctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagt 183  Q
    ||||||||||||||||| || |||||| |||||  ||||||||||||||| |||||| ||||||||||||||||||| ||||||| |||||| |||||||    
T  209942 ctagcaggtaagcttctaagtatcttgctcacatgatcagaagctacatagcttttc-tcagtatttgaagtccagaaactagagcctgaaatcttgagt 210040  T
Q  184 ac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    || || || | ||||||||||||||||||||| ||||    
T  210041 acatttgc-tcaatgctttcatcatctttcattttga 210076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 16852446 - 16852584
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| |||||||||||| || |||||| |||||  |||| |||||||||| ||||||||| |||||||||||||||| |||||||||||||| ||||    
T  16852446 catctagtaggtaagcttctgagtatcttgctcacatgatcaaaagctacatagcttttcttcggtatttgaagtccagaaactagagtctgaaatcttg 16852545  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  16852546 agtacatttgc-tcaatactttcatcatctttcattttga 16852584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 13694805 - 13694898
Alignment:
Q  91 gtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagta 184  Q
    ||||||| ||||||||||| ||||||  ||||||||||||| ||||||||||||| || ||||||||||||||||||||||||| |||||||||    
T  13694805 gtaagctccttagaatcttcttcacatgatcagaagctacacaacttttcttcagaatatgaagtccagagactagagtctgaagccttgagta 13694898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 17246108 - 17246246
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| |||||||||||||| || |||||| |||||  |||||| |||||||| ||||||||| |||||||||||||||| |||||||||||||| |||     
T  17246108 catcttgcaggtaagcttctaagtatcttgctcacatgatcagaggctacatagcttttcttcggtatttgaagtccagaaactagagtctgaaatctta 17246207  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  17246208 agtacatttgc-tcaatactttcatcatctttcattttga 17246246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 15458896 - 15458964
Alignment:
Q  12 tttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggagaa 80  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  15458896 tttcaaaatgaagtagaaaaccaactaggcaagaaaatcaaaatgcttcgatctgatcgaggtggagaa 15458964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 15819539 - 15819607
Alignment:
Q  12 tttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggagaa 80  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  15819539 tttcaaaatgaagtagaaaaccaactaggcaagaaaatcaaaatgcttcgatctgatcgaggtggagaa 15819607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 18113946 - 18113878
Alignment:
Q  12 tttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggagaa 80  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  18113946 tttcaaaatgaagtagaaaaccaactaggcaagaaaatcaaaatgcttcgatctgatcgaggtggagaa 18113878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 18160561 - 18160629
Alignment:
Q  12 tttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggagaa 80  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  18160561 tttcaaaatgaagtagaaaaccaactaggcaagaaaatcaaaatgcttcgatctgatcgaggtggagaa 18160629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 14712321 - 14712217
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| |||||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  14712321 catctagaaggcaagcttctcagaatcttgctcacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 14712222  T
Q  181 agtac 185  Q
    |||||    
T  14712221 agtac 14712217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 14905898 - 14905760
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| |||||||| ||||| || || ||| |||||  ||||||||||||||| | |||||||||||||||||||||| | |||||| ||||||| ||||    
T  14905898 catcttgcaggtaaccttctaagtattttgctcacatgatcagaagctacatagcctttcttcagtatttgaagtccataaactagattctgaaatcttg 14905799  T
Q  181 agtac-ttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || || | ||| ||||||||||||||||| ||||    
T  14905798 agtacatttgc-tcaatactttcatcatctttcattttga 14905760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 17527945 - 17527841
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||||||||| |||||||||||  |||||  ||||  | ||| |||  |||||||||  |||||||||||||| |||| ||||||||||||||    
T  17527945 catctagcaggtaagctccttagaatcttcatcacatgatcatcaactatatagattttcttcaaaatttgaagtccagatactatagtctgaaaccttg 17527846  T
Q  181 agtac 185  Q
    |||||    
T  17527845 agtac 17527841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 40455858 - 40455725
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| || | ||| ||||| ||||    
T  40455858 catctagaaggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaaccaaagtttgaaatcttg 40455759  T
Q  181 agtacttcgctttaatgctttcatcatctttcat 214  Q
    ||||| |  ||||||| || |||||||| |||||    
T  40455758 agtacatttctttaatactctcatcatccttcat 40455725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 10662737 - 10662657
Alignment:
Q  105 atcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||| |||||  || |||||| |||||  ||||||||||||||||||||||||||||||| || ||||| |||||||||    
T  10662737 atcttgctcacatgattagaagcaacatagattttcttcagtatttgaagtccagagactagggtttgaaatcttgagtac 10662657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 185
Target Start/End: Complemental strand, 10876882 - 10876802
Alignment:
Q  105 atcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||| |||||  || |||||| |||||  ||||||||||||||||||||||||||||||| || ||||| |||||||||    
T  10876882 atcttgctcacatgattagaagcaacatagattttcttcagtatttgaagtccagagactagggtttgaaatcttgagtac 10876802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 27816406 - 27816340
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| |||||||| |||| ||| ||||| |||||||||    
T  27816406 atcagaagcaacatagcttttcttcagtatttgcagtccagaaactaaagtttgaaatcttgagtac 27816340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 4989285 - 4989160
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  4989285 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 4989186  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     ||| ||| || |||||||| |||||    
T  4989185 tcttcaatactctcatcatccttcat 4989160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 5021501 - 5021626
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  5021501 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 5021600  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     ||| ||| || |||||||| |||||    
T  5021601 tcttcaatactctcatcatccttcat 5021626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 18753980 - 18753855
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |     
T  18753980 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatt 18753881  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     ||| ||| || |||||||| |||||    
T  18753880 tcttcaatactctcatcatccttcat 18753855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 16265230 - 16265326
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  16265230 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 16265326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 16820844 - 16820752
Alignment:
Q  93 aagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||| | ||||||||| | |||  |||| |||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| |||||||||    
T  16820844 aagcttatcagaatcttgcttacatgatcaaaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttgagtac 16820752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 17927464 - 17927560
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  17927464 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 17927560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 18131739 - 18131643
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  18131739 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 18131643  T

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Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 22005782 - 22005878
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  22005782 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 22005878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 24649726 - 24649821
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttcgctttaatgctttcatcatctttcat 214  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| ||||||||| |  |||  || || ||||||||||||||    
T  24649726 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtacatttcttctatactctcatcatctttcat 24649821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 27175469 - 27175535
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  27175469 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 27175535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 30927953 - 30927887
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  30927953 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 30927887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 459928 - 460024
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  || |||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  459928 aggtaagcttctcaaaatcttactaacatgattagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 460024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 10742088 - 10741992
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  |||||| || ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  10742088 aggtaagcttctcaaaatcttactaacatgatcagaggcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 10741992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 10955857 - 10955761
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  |||||| || ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  10955857 aggtaagcttctcaaaatcttactaacatgatcagaggcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 10955761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Complemental strand, 14903890 - 14903846
Alignment:
Q  141 ttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||| || ||||||||||| ||||||||||||||||||||||||    
T  14903890 ttcagaatctgaagtccagatactagagtctgaaaccttgagtac 14903846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 19945828 - 19945732
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||| | ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  19945828 aggtaagcttctcaaaatcttactaacatgatcagaaacaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 19945732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 36027656 - 36027752
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  36027656 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 36027752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 185
Target Start/End: Original strand, 49516902 - 49516998
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| |||||||||||||| || | |||||| |||| ||| ||||| |||||||||    
T  49516902 aggtaagcttctcaaaatcttactaacatgatcagaagcaacatagcttttcttcagtatctgcaatccagaaactaaagtttgaaatcttgagtac 49516998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 14837568 - 14837502
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| || |||||||||||||| |||||||| |||| ||| ||||| |||||||||    
T  14837568 atcagaagtaacatagctcttcttcagtatttgcagtccagatactaaagtttgaaatcttgagtac 14837502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 219
Target Start/End: Complemental strand, 15195411 - 15195285
Alignment:
Q  93 aagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttcgctt 192  Q
    |||||||| ||||||||| | |||  ||||||||  ||||| || |||||||||||||| ||| |||| |||| ||| ||||| ||| ||||| || | |    
T  15195411 aagcttctcagaatcttgctaacatgatcagaagtaacatagctcttcttcagtatttgcagttcagatactaaagtttgaaatcttaagtacatctcct 15195312  T
Q  193 taatgctttcatcatctttcatcttga 219  Q
      || || |||||||| ||||||||||    
T  15195311 ctatactctcatcatccttcatcttga 15195285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 27665968 - 27666034
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  27665968 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 27666034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 55746712 - 55746646
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  55746712 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 55746646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 18065340 - 18065465
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttc 188  Q
    |||||||||||| | ||||||  | |||  ||||||||| ||||| ||||||||||| ||||| | |||||| || | ||| ||||| ||||||||| |     
T  18065340 aggtaagcttctcaaaatcttactgacatgatcagaagcaacatagcttttcttcagaatttgcaatccagaaaccaaagtttgaaatcttgagtacatt 18065439  T
Q  189 gctttaatgctttcatcatctttcat 214  Q
     ||| ||| || |||||||| |||||    
T  18065440 tcttcaatactctcatcatccttcat 18065465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 16316084 - 16316188
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||  | |||  ||||||||  ||||| || |||||||||||||| ||||| || |||| ||| ||||| || |    
T  16316084 catctagaaggcaagcttctcagaatcttactaacaagatcagaagtgacatagctcttcttcagtatttgcagtccggatactaaagtttgaaatctag 16316183  T
Q  181 agtac 185  Q
    |||||    
T  16316184 agtac 16316188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 35969 - 36107
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| |||||||||||||| || |||||| |||||  |||||| ||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  35969 catcttgcaggtaagcttctcagtatcttgctcacaagatcagaggctgcatagcttttcttcagtatttgaagtccagaaactagagtctgaaatcttg 36068  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |    | ||| ||||||||||||||||| ||||    
T  36069 agtacattttctcaatactttcatcatctttcattttga 36107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 134029 - 134167
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| |||||||||||||| || |||||| |||||  |||||| ||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  134029 catcttgcaggtaagcttctcagtatcttgctcacaagatcagaggctgcatagcttttcttcagtatttgaagtccagaaactagagtctgaaatcttg 134128  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |    | ||| ||||||||||||||||| ||||    
T  134129 agtacattttctcaatactttcatcatctttcattttga 134167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 157671 - 157775
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||||||||||||||| |||||| |||||  |||| |||||||||| |||||||| ||||||| ||||||||| |||||||| ||||| ||||    
T  157671 catctagcaggtaagcttcttagtatcttgctcacatgatcaaaagctacatagcttttctttagtatttcaagtccagaaactagagtgtgaaatcttg 157770  T
Q  181 agtac 185  Q
    |||||    
T  157771 agtac 157775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 45254 - 45188
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||| ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  45254 atcagaagcaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 45188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 85 - 185
Target Start/End: Original strand, 2890 - 2990
Alignment:
Q  85 tagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagta 184  Q
    ||||| ||||||| ||||||||||||||||||  |||| || |||||||||||||||||||||||| ||||||||| |||||||||| ||||||| ||||    
T  2890 tagcacgtaagctccttagaatcttgttcacatgatcaaaaactacataacttttcttcagtatttaaagtccagatactagagtctaaaaccttaagta 2989  T
Q  185 c 185  Q
    |    
T  2990 c 2990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 219
Target Start/End: Original strand, 9404 - 9532
Alignment:
Q  91 gtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttcgc 190  Q
    |||||||||||| |||||||||||||  |||| ||||||  ||||||||||| | |||||||||||||||||||||||||||| | ||||||||| |  |    
T  9404 gtaagcttcttataatcttgttcacatgatcataagctaggtaacttttctttaatatttgaagtccagagactagagtctgatatcttgagtacatttc 9503  T
Q  191 tttaatgctttcatcatctttcatcttga 219  Q
     | ||| | ||||||||||||||||||||    
T  9504 ctcaatacattcatcatctttcatcttga 9532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 210
Target Start/End: Original strand, 75798 - 75927
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    |||| ||||||||||||| | |||||||||||||||  |||| |||| |||||  ||||||||||||||||||||| |||||||||||||||||| | ||    
T  75798 catcaagcaggtaagcttatcagaatcttgttcacatgatcataagcaacatagattttcttcagtatttgaagtcaagagactagagtctgaaatcatg 75897  T
Q  181 agtacttcgctttaatgctttcatcatctt 210  Q
    ||||| |    ||||| |||||||||||||    
T  75898 agtacatttacttaatactttcatcatctt 75927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 6578 - 6510
Alignment:
Q  12 tttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggagaa 80  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  6578 tttcaaaatgaagtagaaaaccaactaggcaagaaaatcaaaatgcttcgatctgatcgaggtggagaa 6510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 47849 - 47953
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||| |||||||| |||||||| |||||| |||||  ||||||||||||||| |||||||||| ||||||||||||||| |||||||||| ||| |||     
T  47849 catcttgcaggtaaacttcttagtatcttgctcacatgatcagaagctacatagcttttcttcaatatttgaagtccagaaactagagtcttaaatctta 47948  T
Q  181 agtac 185  Q
    |||||    
T  47949 agtac 47953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 85 - 185
Target Start/End: Complemental strand, 3282 - 3182
Alignment:
Q  85 tagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagta 184  Q
    ||||| |||| |||||||||||||||||||||  |||| |||||||||| ||||||||||  || ||||||||| |||||||||| ||||||||||||||    
T  3282 tagcaagtaaacttcttagaatcttgttcacatgatcataagctacatagcttttcttcaaaatctgaagtccaaagactagagtttgaaaccttgagta 3183  T
Q  185 c 185  Q
    |    
T  3182 c 3182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 134536 - 134468
Alignment:
Q  12 tttcagaatgaagtagaaaaccaactaggcaagaatatcaaaatgcttcaatctgatcgaggtggagaa 80  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  134536 tttcaaaatgaagtagaaaaccaactaggcaagaaaatcaaaatgcttcgatctgatcgaggtggagaa 134468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 1764 - 1660
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||| |||||||||| || |||||  |||||  ||||||||||||||| || |||||||||||||||||| || | |||||||||||||| ||||    
T  1764 catctagcaagtaagcttctcagtatcttactcacatgatcagaagctacatagctcttcttcagtatttgaagttcaaaaactagagtctgaaatcttg 1665  T
Q  181 agtac 185  Q
    |||||    
T  1664 agtac 1660  T

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Target: scaffold0315 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 7209 - 7338
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac-tt 187  Q
    |||||| |||||||| |||||| |||||  ||||||||||||||| |||||||| ||||||||| ||||||| ||| |||||||||| ||||||||| ||    
T  7209 aggtaaacttcttagtatcttgctcacatgatcagaagctacatagcttttctttagtatttgacgtccagaaact-gagtctgaaatcttgagtacatt 7307  T
Q  188 cgctttaatgctttcatcatctttcatcttga 219  Q
     || | ||| ||||||||||||||||| ||||    
T  7308 tgc-tcaatactttcatcatctttcattttga 7338  T

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Target: scaffold0042 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 4017 - 4155
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  4017 catctagaaggcaagcttctcagaatcttgcttacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 4116  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | |  || || |||||||| ||||||||||    
T  4117 agtacatctcctctatactctcatcatccttcatcttga 4155  T

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Target: scaffold1820 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold1820
Description:

Target: scaffold1820; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 162 - 298
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| |  |||||| |||||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  162 catctagaaggcaagcttctcaatatcttgctcacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 261  T
Q  181 agtacttcgctttaatgctttcatcatctttcatctt 217  Q
    ||||| || |||  || || |||||||| ||||||||    
T  262 agtacatctcttctatactctcatcatccttcatctt 298  T

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Target: scaffold0443 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 93 - 185
Target Start/End: Complemental strand, 2536 - 2444
Alignment:
Q  93 aagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    |||||||| ||||||||| |||||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| |||||||||    
T  2536 aagcttctcagaatcttgctcacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttgagtac 2444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 2827 - 2723
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| |||||  || |||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  2827 catctagaaggcaagcttctcagaatcttgctcacatgattagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 2728  T
Q  181 agtac 185  Q
    |||||    
T  2727 agtac 2723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1507 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1507
Description:

Target: scaffold1507; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 917 - 779
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  ||||||||  |||||||| || ||||||||||| |||||||| |||| ||| ||||| ||||    
T  917 catctagaaggcaagcttctcagaatcttgcttacatgatcagaagaaacataactcttattcagtatttgcagtccagatactaaagtttgaaatcttg 818  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | |  || || |||||||| ||||||||||    
T  817 agtacatctcctctatactctcatcatccttcatcttga 779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0925 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0925
Description:

Target: scaffold0925; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 3764 - 3626
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| |  |||||  |||||  ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  3764 catctagaaggcaagcttctcaatatctttctcacatgatcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 3665  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || |||  || || |||||| | ||||||||||    
T  3664 agtacatctcttctatactctcatcacccttcatcttga 3626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 22510 - 22372
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||| ||||||||||| |||||| | | |  |||| || | |||||||  |||||||||||||| ||||||||||||||  | ||||||||||    
T  22510 catctagcaggcaagcttcttagtatcttgctaagatgatcataaacaacataacacttcttcagtatttgtagtccagagactaggatttgaaaccttg 22411  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| |  | | |||  |||||||||| ||||||||||    
T  22410 agtacatttcctcaatagtttcatcatccttcatcttga 22372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 9302 - 9198
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||| | |||  ||||||||  ||||| || |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  9302 catctagaaggcaagcttctcagaatcttgctaacatgatcagaagtaacatagctcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 9203  T
Q  181 agtac 185  Q
    |||||    
T  9202 agtac 9198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 219
Target Start/End: Complemental strand, 166201 - 166101
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtacttcgctttaatgctttcatcatctttcatcttg 218  Q
    ||||||||| |||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||||||| |  |||  || || |||||||| |||||||||    
T  166201 atcagaagcaacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttgagtacatttcttctatactctcatcatccttcatcttg 166102  T
Q  219 a 219  Q
    |    
T  166101 a 166101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 11643 - 11505
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||| ||| | ||||| |||||||| |||  |||| |||| |  ||||| |||||| ||||||| |||||||| ||||| || |||||| |||    
T  11643 catctagcaggcaagatccttagtatcttgttaacatgatcataagcaaagtaactcttcttcggtatttgtagtccagacactagggtttgaaacgttg 11544  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | | |||  |||||||||| ||||||||||    
T  11543 agtacatctcctcaatagtttcatcatccttcatcttga 11505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 16316 - 16178
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||||||| ||| | ||||| |||||||| |||  |||| |||| |  ||||| |||||| ||||||| |||||||| ||||| || |||||| |||    
T  16316 catctagcaggcaagatccttagtatcttgttaacatgatcataagcaaagtaactcttcttcggtatttgtagtccagacactagggtttgaaacgttg 16217  T
Q  181 agtacttcgctttaatgctttcatcatctttcatcttga 219  Q
    ||||| || | | |||  |||||||||| ||||||||||    
T  16216 agtacatctcctcaatagtttcatcatccttcatcttga 16178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 214
Target Start/End: Complemental strand, 190566 - 190440
Alignment:
Q  88 caggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtactt 187  Q
    ||||||| || ||||||||||| ||||||  ||||| | ||||||| ||||||||  | || |||||| |||| |||||| ||| ||||||||||||| |    
T  190566 caggtaaactccttagaatcttcttcacatgatcagcaactacatagcttttcttttgaatctgaagttcagaaactagattcttaaaccttgagtacat 190467  T
Q  188 cgctttaatgctttcatcatctttcat 214  Q
     | || ||||  |||||||||||||||    
T  190466 agtttcaatgtcttcatcatctttcat 190440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 185
Target Start/End: Original strand, 23967 - 24071
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| ||||||||  | |||  ||||||||  ||||| || |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  23967 catctagaaggcaagcttctcagaatcttactaacatgatcagaagtgacatagctcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 24066  T
Q  181 agtac 185  Q
    |||||    
T  24067 agtac 24071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 1081 - 982
Alignment:
Q  81 catctagcaggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttg 180  Q
    ||||||| ||| |||||||| |  |||||  |||||  |||||| ||||||||||| |||||||||||||| |||||||| |||| ||| ||||| ||||    
T  1081 catctagaaggcaagcttctcaatatcttactcacatgatcagacgctacataactcttcttcagtatttgcagtccagatactaaagtttgaaatcttg 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 7250 - 7191
Alignment:
Q  89 aggtaagcttcttagaatcttgttcacacaatcagaagctacataacttttcttcagtat 148  Q
    ||||||| |||| || |||||| |||||  ||||||||||||||| ||||||||||||||    
T  7250 aggtaagtttctaagtatcttgctcacatgatcagaagctacatagcttttcttcagtat 7191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 38454 - 38388
Alignment:
Q  119 atcagaagctacataacttttcttcagtatttgaagtccagagactagagtctgaaaccttgagtac 185  Q
    ||||||||  ||||| ||||||||||||||||| | |||||| |||| ||| ||||| |||||||||    
T  38454 atcagaagaaacatagcttttcttcagtatttgcaatccagaaactaaagtttgaaatcttgagtac 38388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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