View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17318_low_58 (Length: 242)
Name: NF17318_low_58
Description: NF17318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17318_low_58 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 7 - 242
Target Start/End: Complemental strand, 770162 - 769927
Alignment:
| Q |
7 |
tacattatactatataaattgttcaaaacatgaaacacaaatttatcaaatccttataatatagaacataaacatcatgtcatgctccaatatctcataa |
106 |
Q |
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| T |
770162 |
tacataatactatataaattgttcaaaacatgaaacacaaatttatcaaatccttacaatatagaacatacacatcatgtcatgctccaatatctcataa |
770063 |
T |
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| Q |
107 |
gatatattctgacttttataacaacaacttatttgcaaaatatgtcaaacaattcaaattgttttagtaacagcaaaaagcaaaagaaatcttcaatgtc |
206 |
Q |
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| T |
770062 |
gatatattctgacttttataacaacaacttatttgcaaaatatgtcaaacagttcaaattgttttagtaacagcaaaaagcaaaagaaatcttcaatgtc |
769963 |
T |
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| Q |
207 |
atctccaaacattatacttcctacaaatagcttatg |
242 |
Q |
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| T |
769962 |
atctccaaacattatacttcctacaaatagcctatg |
769927 |
T |
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