View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1731_high_6 (Length: 483)
Name: NF1731_high_6
Description: NF1731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1731_high_6 |
 |  |
|
| [»] scaffold0157 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 408; Significance: 0; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 13 - 465
Target Start/End: Complemental strand, 7638781 - 7638335
Alignment:
| Q |
13 |
atactagaatagagaaataatgatgctattgctaagttgagtgaatagaggtccccaaactgcgataaattaaagcggtcgactattaagattttcactt |
112 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7638781 |
atactagaatagagaaataatgatgctattgctaagttgagtgaatagaggtccccaaattgcgataaattaaagcggtcgactattaagattttcactt |
7638682 |
T |
 |
| Q |
113 |
ctcattaccttacatgttacaaaagccatctcttaggattataattatatcataccaaacatatctataagtttcttgtcaagtagtttatgaaaaccaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7638681 |
ctcattaccttacatgttacaaaagccatctcttaggattataattatatcataccaaacatatctataagtttcttgtcaagtagtttatgaaaaccaa |
7638582 |
T |
 |
| Q |
213 |
tcttcgttagtgagaacttattaataataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataaatatgtcaatccaaacg |
312 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7638581 |
ttttcgttagtgagaacttattaat---aatacataaaagctgatttatttgcataaacagttttgcataagctaataaataaatatgtcaatccaaacg |
7638485 |
T |
 |
| Q |
313 |
ggtcactaagctacttgaattagctataagctcatgaaaataagctcgtgttaccaaacggaacttttttaattataacagcttataagctataagttca |
412 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |
|
|
| T |
7638484 |
ggtcactaagctacttgaattag--ataagctcatgaaaataagctcgtgttaccaaacggaacttttttaattataccagcttataagctataag-tca |
7638388 |
T |
 |
| Q |
413 |
aattctccaatcaaggtcacaataaaaattacacacaaataaaaacatggaga |
465 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7638387 |
aattctccaatcaaggtcacaataaaaattacacacaaataaaaacatggaga |
7638335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 13131466 - 13131409
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
13131466 |
aataatacataaaagcttatttatttgcataatttgttttgcataagctaaaaaataa |
13131409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 16972407 - 16972465
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataaa |
296 |
Q |
| |
|
||||||||||| ||||| ||||||||||| ||| |||||||||||||||| ||||||| |
|
|
| T |
16972407 |
aataatacatacaagcttatttatttgcaaaaattgttttgcataagctaaaaaataaa |
16972465 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 32131476 - 32131419
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
|||||| |||||||||| |||||||||||||| | |||||||||||||| | |||||| |
|
|
| T |
32131476 |
aataatgcataaaagcttatttatttgcataagctgttttgcataagctcaaaaataa |
32131419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 269
Target Start/End: Complemental strand, 3130053 - 3130011
Alignment:
| Q |
227 |
aacttattaataataatacataaaagctgatttatttgcataa |
269 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
3130053 |
aacttataaataataatacataaaaactgatgtatttgcataa |
3130011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 19327903 - 19327853
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaa |
288 |
Q |
| |
|
||||||||||||||| | |||||||||||||| |||||||||||||||| |
|
|
| T |
19327903 |
aataatacataaaagtttatttatttgcataagttgttttgcataagctaa |
19327853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 269
Target Start/End: Original strand, 41145437 - 41145479
Alignment:
| Q |
227 |
aacttattaataataatacataaaagctgatttatttgcataa |
269 |
Q |
| |
|
||||||| |||||||||| ||||||||| |||||||||||||| |
|
|
| T |
41145437 |
aacttatgaataataataaataaaagcttatttatttgcataa |
41145479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 271
Target Start/End: Complemental strand, 13265520 - 13265487
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaac |
271 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |
|
|
| T |
13265520 |
aataatacataaaagcttatttatttgcataaac |
13265487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 28879168 - 28879234
Alignment:
| Q |
244 |
acataaaagctgatttatttgcataaacagttttgcataagctaataaataaatatgtcaatccaaacggg |
314 |
Q |
| |
|
||||||||||| |||||||||||||| | |||| |||||||||| |||||| ||||||||||||||| |
|
|
| T |
28879168 |
acataaaagcttatttatttgcataagctatttttcataagctaaaaaataa----gtcaatccaaacggg |
28879234 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 16706150 - 16706198
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
|||||||||||||| | |||||||||||||| | |||||||||||||| |
|
|
| T |
16706150 |
aataatacataaaaacatatttatttgcataagccgttttgcataagct |
16706198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 19925438 - 19925486
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
|||||||||| || ||| |||||||||||||||| ||| |||||||||| |
|
|
| T |
19925438 |
aataatacattaatgcttatttatttgcataaactgttatgcataagct |
19925486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 8)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 4026961 - 4026905
Alignment:
| Q |
239 |
ataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||||||||||||||| | |||||| |
|
|
| T |
4026961 |
ataatacataaaagcttatttatttgcataagcagttttgcataagctcaaaaataa |
4026905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 34913440 - 34913488
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | |||||||||||||| |
|
|
| T |
34913440 |
aataatacataaaagcttatttatttgcataagctgttttgcataagct |
34913488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 27703508 - 27703556
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||||| ||||||||| |||||||||||||| | |||||||||||||| |
|
|
| T |
27703508 |
aataatatataaaagcttatttatttgcataagctgttttgcataagct |
27703556 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 37419974 - 37419922
Alignment:
| Q |
218 |
gttagtgagaacttattaataataa-tacataaaagctgatttatttgcataa |
269 |
Q |
| |
|
||||| |||||||||| |||||||| |||||||||||| |||||||||||||| |
|
|
| T |
37419974 |
gttagcgagaacttatgaataataaatacataaaagcttatttatttgcataa |
37419922 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 13056380 - 13056434
Alignment:
| Q |
241 |
aatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
|||||||||||||| || ||||||||||| | ||||||||| |||||| |||||| |
|
|
| T |
13056380 |
aatacataaaagcttatctatttgcataatccgttttgcatgagctaaaaaataa |
13056434 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 4090525 - 4090468
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
|||||||||| |||| | |||||||||||||| | |||||||||||||| | |||||| |
|
|
| T |
4090525 |
aataatacatcaaagtttatttatttgcataagctgttttgcataagctcaaaaataa |
4090468 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 313
Target Start/End: Original strand, 8832540 - 8832635
Alignment:
| Q |
210 |
caatcttcgttagtgagaacttattaataataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataaatatgtcaatccaa |
309 |
Q |
| |
|
|||| ||||||||||| ||||||| ||| | ||||||||||| |||||||||||||| | |||| |||||||||| |||||| |||||||||| |
|
|
| T |
8832540 |
caattttcgttagtgaaaacttatgaatta----acataaaagcttatttatttgcataagctatttttcataagctaaaaaataa----gtcaatccaa |
8832631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 17797335 - 17797376
Alignment:
| Q |
256 |
atttatttgcataaacagttttgcataagctaataaataaat |
297 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||| |||||||| |
|
|
| T |
17797335 |
atttatttgcataaactgttttgcataagttaaaaaataaat |
17797376 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 14)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 29922239 - 29922297
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataaa |
296 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| |||||||||||||| | ||||||| |
|
|
| T |
29922239 |
aataatacataaaaacttatttatttgcataaactgttttgcataagctcaaaaataaa |
29922297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 17128314 - 17128257
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | |||||||||||||| | |||||| |
|
|
| T |
17128314 |
aataatacataaaagcttatttatttgcataagctgttttgcataagctcaaaaataa |
17128257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 295
Target Start/End: Complemental strand, 41059792 - 41059711
Alignment:
| Q |
210 |
caatcttcgttagtgagaacttattaataataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
|||| ||||||||||||||||||| ||| | ||||||||||| |||||||||||||||| ||||| |||||||| | |||||| |
|
|
| T |
41059792 |
caattttcgttagtgagaacttatgaatta----acataaaagcttatttatttgcataaactgtttttcataagctcaaaaataa |
41059711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 22201986 - 22202043
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| | |||||||||||||| | |||||| |
|
|
| T |
22201986 |
aataatacataaaagcttatttatttacataagctgttttgcataagctcaaaaataa |
22202043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 210 - 296
Target Start/End: Original strand, 42852104 - 42852186
Alignment:
| Q |
210 |
caatcttcgttagtgagaacttattaataataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataaa |
296 |
Q |
| |
|
|||| ||||||||||||||||||| ||| | ||||||||||| ||||| |||||||| | |||||||||||| ||| ||||||| |
|
|
| T |
42852104 |
caattttcgttagtgagaacttatgaatta----acataaaagcttatttagttgcataagctgttttgcataagttaaaaaataaa |
42852186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 10537269 - 10537317
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | ||||| |||||||| |
|
|
| T |
10537269 |
aataatacataaaagcttatttatttgcataagctgttttacataagct |
10537317 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 26003033 - 26002985
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
|||||||||||||| || |||||||||||||||| |||||| ||||||| |
|
|
| T |
26003033 |
aataatacataaaaacttatttatttgcataaactgttttgtataagct |
26002985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 285
Target Start/End: Complemental strand, 42852058 - 42852011
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagc |
285 |
Q |
| |
|
||||||||||||||||| ||||||||| |||| | ||||||||||||| |
|
|
| T |
42852058 |
aataatacataaaagcttatttatttgaataagctgttttgcataagc |
42852011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 1372043 - 1372100
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| |||||||||||||| | |||||| |
|
|
| T |
1372043 |
aataatacataaaagtgtatttatttacataaactgttttgcataagctcaaaaataa |
1372100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 3520553 - 3520609
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
|||||||| |||||| | |||||||| ||||||| |||||||||||||||| |||||| |
|
|
| T |
3520553 |
aataatac-taaaaggttatttatttacataaactgttttgcataagctaaaaaataa |
3520609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 24030251 - 24030194
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||||||||| ||||||||| |||| | |||||| ||||||| | |||||| |
|
|
| T |
24030251 |
aataatacataaaagcttatttatttggataagctgttttgtataagcttaaaaataa |
24030194 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 2878726 - 2878774
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||||| ||||||||| |||||||||||||| | |||| ||||||||| |
|
|
| T |
2878726 |
aataatagataaaagcttatttatttgcataagctgtttagcataagct |
2878774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 11706972 - 11707020
Alignment:
| Q |
242 |
atacataaaagctgatttatttgcataaacagttttgcataagctaata |
290 |
Q |
| |
|
||||||||||||| ||||||||||||| | ||||||||||||| |||| |
|
|
| T |
11706972 |
atacataaaagcttatttatttgcataggctgttttgcataagccaata |
11707020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 43268670 - 43268702
Alignment:
| Q |
237 |
taataatacataaaagctgatttatttgcataa |
269 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
43268670 |
taataatacataaaagcttatttatttgcataa |
43268702 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 29877675 - 29877618
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||||||| | |||||| |
|
|
| T |
29877675 |
aataatacataaaagcttatttatttgcataaattgttttgcataagctcaaaaataa |
29877618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 8130524 - 8130467
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
|||||| |||||||||| |||||||||||||| | |||||||||| ||||| |||||| |
|
|
| T |
8130524 |
aataatgcataaaagcttatttatttgcataagctgttttgcatatgctaaaaaataa |
8130467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 287
Target Start/End: Original strand, 12495696 - 12495745
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagcta |
287 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | ||||||| ||||||| |
|
|
| T |
12495696 |
aataatacataaaagcttatttatttgcataagctgttttgcttaagcta |
12495745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 23297474 - 23297417
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | ||||||||||||| | |||||| |
|
|
| T |
23297474 |
aataatacataaaagcttatttatttgcataagctattttgcataagctcaaaaataa |
23297417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 18424327 - 18424375
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||||||||||||||| ||||||||| ||||| |||||||||||||| |
|
|
| T |
18424327 |
aataatacataaaagcttatttatttgtataaattgttttgcataagct |
18424375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 948108 - 948058
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaa |
288 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| | ||||||||||||||| |
|
|
| T |
948108 |
aataatacataaaagcttatttattttcataagctattttgcataagctaa |
948058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 42611917 - 42611975
Alignment:
| Q |
238 |
aataatacata-aaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||| |||||| |||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
42611917 |
aataatacatataaagcttatttatttgcataagttgttttgcataagctaaaaaataa |
42611975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 269
Target Start/End: Complemental strand, 28663466 - 28663433
Alignment:
| Q |
236 |
ataataatacataaaagctgatttatttgcataa |
269 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |
|
|
| T |
28663466 |
ataataatacataaaagctcatttatttgcataa |
28663433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 34633435 - 34633378
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||| ||||||||| | |||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
34633435 |
aataaaacataaaagtttatttatttgcataagttgttttgcataagctaaaaaataa |
34633378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 38345871 - 38345919
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
|||| |||||||||||| ||||||||| |||| | |||||||||||||| |
|
|
| T |
38345871 |
aatactacataaaagcttatttatttggataagctgttttgcataagct |
38345919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 3211053 - 3211108
Alignment:
| Q |
240 |
taatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||||||| |||||||||||||| | |||||||| ||||||| |||||| |
|
|
| T |
3211053 |
taatacataaaagcttatttatttgcataagctgttttgcacaagctaaaaaataa |
3211108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 30534016 - 30533968
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | |||||||| ||||| |
|
|
| T |
30534016 |
aataatacataaaagcttatttatttgcataagctgttttgcacaagct |
30533968 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 295
Target Start/End: Complemental strand, 9201717 - 9201643
Alignment:
| Q |
217 |
cgttagtgagaacttattaataataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||||||||| ||| | ||||||||||| |||||||||||||| | |||| |||||||||| |||||| |
|
|
| T |
9201717 |
cgttagtgagaacttatgaatta----acataaaagcttatttatttgcataagcgattttccataagctaaaaaataa |
9201643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 10687352 - 10687295
Alignment:
| Q |
229 |
cttattaataataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||| ||||| ||||||| |||||| |||||||||||||| | |||||| ||||||| |
|
|
| T |
10687352 |
cttatgaataaaaatacatcaaagcttatttatttgcataagctgttttgaataagct |
10687295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 2255766 - 2255722
Alignment:
| Q |
242 |
atacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
2255766 |
atacataaaagctcatttatttgcataagtcgttttgcataagct |
2255722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 297
Target Start/End: Complemental strand, 21025215 - 21025139
Alignment:
| Q |
221 |
agtgagaacttattaataataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataaat |
297 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| |||||||||||||| | |||| ||||||||| |||||||| |
|
|
| T |
21025215 |
agtgagaacttataaataaattaacataaaagcttatttatttgcataagctatttttgataagctaaaaaataaat |
21025139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0157 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0157
Description:
Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 287
Target Start/End: Complemental strand, 24781 - 24732
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagcta |
287 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | ||||||| ||||||| |
|
|
| T |
24781 |
aataatacataaaagcttatttatttgcataagctgttttgcttaagcta |
24732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 34; Significance: 0.0000000007; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 38372594 - 38372537
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
|||||||||||| |||| |||||||||||||| | |||||||||||||| | |||||| |
|
|
| T |
38372594 |
aataatacataagagcttatttatttgcataagctgttttgcataagctcaaaaataa |
38372537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 44613523 - 44613571
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||||| ||||||||| |||||||||||||| | |||||||||||||| |
|
|
| T |
44613523 |
aataataaataaaagcttatttatttgcataagctgttttgcataagct |
44613571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 283
Target Start/End: Complemental strand, 21249192 - 21249147
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataa |
283 |
Q |
| |
|
|||||||||||||| || |||||||||||||| |||||||||||| |
|
|
| T |
21249192 |
aataatacataaaaacttatttatttgcataagtagttttgcataa |
21249147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 38372641 - 38372694
Alignment:
| Q |
210 |
caatcttcgttagtgagaacttattaataataatacataaaagctgatttatttgcat |
267 |
Q |
| |
|
|||| ||||||||||||||||||| ||| | |||||||||||||||||||||||| |
|
|
| T |
38372641 |
caattttcgttagtgagaacttatgaatta----acataaaagctgatttatttgcat |
38372694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 34; Significance: 0.0000000007; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 23555520 - 23555463
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| |||| | ||||||| | |||||| |
|
|
| T |
23555520 |
aataatacataaaagcttatttatttgcataaactgtttcgtataagctcaaaaataa |
23555463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 40581126 - 40581175
Alignment:
| Q |
237 |
taataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
40581126 |
taataatacataaaagcttatttatttgcataagttgttttgcataagct |
40581175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 29830821 - 29830868
Alignment:
| Q |
239 |
ataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||||||||||| || |||||||||||||||| |||||| ||||||| |
|
|
| T |
29830821 |
ataatacataaaaacttatttatttgcataaactgttttgtataagct |
29830868 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 298
Target Start/End: Complemental strand, 52895408 - 52895324
Alignment:
| Q |
210 |
caatcttcgttagtgagaacttattaataataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataaata |
298 |
Q |
| |
|
|||| |||||||||||||| |||| ||| | ||||||||||| |||||||||| |||||| |||| |||||||| | ||||||||| |
|
|
| T |
52895408 |
caattttcgttagtgagaatttatgaatta----acataaaagcttatttatttgcctaaacaatttttcataagctcaaaaataaata |
52895324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 10272158 - 10272101
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||||||| | |||||||||||| | |||||||||||||||| |||||| |
|
|
| T |
10272158 |
aataatacataaaagtttatttatttgcatgagttgttttgcataagctaaaaaataa |
10272101 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 33946591 - 33946640
Alignment:
| Q |
237 |
taataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||| | ||||||||||||| |
|
|
| T |
33946591 |
taataataaataaaagcttatttatttgcataagctattttgcataagct |
33946640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 50022010 - 50022051
Alignment:
| Q |
242 |
atacataaaagctgatttatttgcataaacagttttgcataa |
283 |
Q |
| |
|
|||||| |||||| |||||||||||||||| ||||||||||| |
|
|
| T |
50022010 |
atacatcaaagcttatttatttgcataaactgttttgcataa |
50022051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 53218090 - 53218147
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
|||||||||||||| || ||||||| |||||| |||||||||||||||| |||||| |
|
|
| T |
53218090 |
aataatacataaaatcttatttattcgcataagttgttttgcataagctaaaaaataa |
53218147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 30500002 - 30499954
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
|||||||||||||| | |||||||||||||||| |||||| ||||||| |
|
|
| T |
30500002 |
aataatacataaaaatttatttatttgcataaactgttttgtataagct |
30499954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 36266280 - 36266232
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||||||||||||| | |||||||||||||||| ||||| ||||||| |
|
|
| T |
36266280 |
aataatacataaaagtttatttatttgcataaactgttttatataagct |
36266232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 269
Target Start/End: Original strand, 41601376 - 41601412
Alignment:
| Q |
233 |
ttaataataatacataaaagctgatttatttgcataa |
269 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
41601376 |
ttaagaataatacataaaaactgatttatttgcataa |
41601412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 10850121 - 10850169
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||| ||||||||||||| |
|
|
| T |
10850121 |
aataatacataaaagcttatttatttgcaaaaactattttgcataagct |
10850169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Complemental strand, 20169300 - 20169252
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | ||||| |||||||| |
|
|
| T |
20169300 |
aataatacataaaagcttatttatttgcataagctgtttttcataagct |
20169252 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 46689600 - 46689648
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
46689600 |
aataataaataaaagcttttttatttgcataaactgttttgcataagct |
46689648 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 286
Target Start/End: Complemental strand, 22593402 - 22593338
Alignment:
| Q |
218 |
gttagtgagaacttattaataataatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
|||||||||||||||| ||| | ||||||||||| |||||||||||||| | |||||||||||||| |
|
|
| T |
22593402 |
gttagtgagaacttataaatta----acataaaagcttatttatttgcataagctgttttgcataagct |
22593338 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 286
Target Start/End: Complemental strand, 16225543 - 16225497
Alignment:
| Q |
240 |
taatacataaaagctgatttatttgcataaacagttttgcataagct |
286 |
Q |
| |
|
|||||||||||| || |||||||| ||||||| |||||||||||||| |
|
|
| T |
16225543 |
taatacataaaaacttatttatttacataaactgttttgcataagct |
16225497 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 4068151 - 4068094
Alignment:
| Q |
238 |
aataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||||||||| ||||||||||| || | ||||||| ||||||| |||||| |
|
|
| T |
4068151 |
aataatacataaaagcttatttatttgcacaagctattttgcaaaagctaaaaaataa |
4068094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 35590162 - 35590109
Alignment:
| Q |
242 |
atacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||| |||||||||| |||||| |
|
|
| T |
35590162 |
atacataaaagcttatttatttgcataagttgttttacataagctaaaaaataa |
35590109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 48819390 - 48819463
Alignment:
| Q |
218 |
gttagtgagaacttattaataataatacataaaagctgatttatttgcataaacagttttgcataagctaataaataa |
295 |
Q |
| |
|
|||||||||||||||| ||| | ||||||||||| |||||||||||||| | |||| |||||||||| |||||| |
|
|
| T |
48819390 |
gttagtgagaacttatgaatta----acataaaagcttatttatttgcataagctatttttcataagctaaaaaataa |
48819463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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