View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1731_low_49 (Length: 248)
Name: NF1731_low_49
Description: NF1731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1731_low_49 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 26986999 - 26986760
Alignment:
| Q |
1 |
tttctcaagtgagatcctttctttctctaatttcttattaagagattcaacagtagctcgtacatcggcaatatcatgagtagttttggttaggttcaac |
100 |
Q |
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| T |
26986999 |
tttctctagtgagatcctttctttctctaatttcttattaagagattcaacagtagctcgtacatcggcaatatcatgagtagttttggttaggttcaac |
26986900 |
T |
|
| Q |
101 |
ttggcctgcttcaattccattagtatcaagtctggagaagatacacgggaaggcatagaacattccttcatgggttgaagaacctcatacggactcgatt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
26986899 |
ttggcctgcttcaattccattagtatcaagtctggagaagatacacgggaaggcatagaacattccttcatgggttgaagaacctcagacggactcgatt |
26986800 |
T |
|
| Q |
201 |
ggttttcctttacttctttctcctctacaatcaacctttg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
26986799 |
ggttttcctttacttctttctcctctacaatcaacctttg |
26986760 |
T |
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