View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1732-Insertion-2 (Length: 1093)

Name: NF1732-Insertion-2
Description: NF1732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1732-Insertion-2
NF1732-Insertion-2
[»] chr3 (60 HSPs)
chr3 (633-1057)||(8161112-8161544)
chr3 (325-640)||(8156126-8156442)
chr3 (8-258)||(8155809-8156059)
chr3 (325-461)||(29067281-29067417)
chr3 (325-459)||(28745769-28745903)
chr3 (325-458)||(20756039-20756172)
chr3 (325-455)||(39427905-39428035)
chr3 (103-258)||(17064505-17064661)
chr3 (332-458)||(30727694-30727820)
chr3 (103-258)||(3449085-3449241)
chr3 (103-258)||(42697046-42697201)
chr3 (103-258)||(25870097-25870253)
chr3 (325-458)||(24649684-24649818)
chr3 (106-258)||(27676634-27676787)
chr3 (325-457)||(3449288-3449419)
chr3 (333-449)||(21963438-21963554)
chr3 (333-449)||(21985874-21985990)
chr3 (102-258)||(10872489-10872646)
chr3 (103-258)||(13286142-13286298)
chr3 (325-453)||(17064326-17064454)
chr3 (103-258)||(24619972-24620128)
chr3 (328-443)||(22494780-22494895)
chr3 (325-459)||(24620196-24620333)
chr3 (103-246)||(28135973-28136116)
chr3 (333-458)||(22137278-22137403)
chr3 (107-258)||(6136348-6136500)
chr3 (103-247)||(9152761-9152903)
chr3 (325-459)||(25870363-25870506)
chr3 (103-209)||(41671427-41671533)
chr3 (354-459)||(15806531-15806635)
chr3 (354-459)||(27676355-27676460)
chr3 (103-258)||(28745974-28746130)
chr3 (160-258)||(20756220-20756319)
chr3 (325-385)||(42696920-42696980)
chr3 (103-233)||(15515033-15515163)
chr3 (325-462)||(22356048-22356186)
chr3 (358-459)||(17796267-17796368)
chr3 (358-459)||(17796376-17796477)
chr3 (358-459)||(19104707-19104808)
chr3 (358-459)||(19104816-19104917)
chr3 (354-436)||(10872971-10873053)
chr3 (149-245)||(17796779-17796873)
chr3 (149-245)||(19105219-19105313)
chr3 (137-257)||(21963630-21963751)
chr3 (137-257)||(21986066-21986187)
chr3 (182-258)||(39428101-39428178)
chr3 (106-257)||(22137476-22137628)
chr3 (103-219)||(8592174-8592290)
chr3 (358-459)||(17796485-17796586)
chr3 (358-459)||(19104925-19105026)
chr3 (182-258)||(29067475-29067552)
chr3 (325-360)||(6136462-6136497)
chr3 (325-360)||(20756223-20756258)
chr3 (325-360)||(25870215-25870250)
chr3 (325-360)||(28745977-28746012)
chr3 (325-360)||(39428104-39428139)
chr3 (107-217)||(27055333-27055443)
chr3 (379-457)||(28135723-28135801)
chr3 (327-360)||(17064573-17064606)
chr3 (331-360)||(29067478-29067507)
[»] chr8 (49 HSPs)
chr8 (325-460)||(5922047-5922182)
chr8 (325-459)||(31424162-31424296)
chr8 (325-456)||(19704451-19704583)
chr8 (102-256)||(17647197-17647352)
chr8 (325-456)||(15294672-15294803)
chr8 (325-456)||(15475041-15475172)
chr8 (327-458)||(45403029-45403160)
chr8 (326-454)||(3094250-3094378)
chr8 (103-258)||(29384087-29384243)
chr8 (121-243)||(15231835-15231957)
chr8 (103-258)||(6811018-6811173)
chr8 (325-459)||(11879599-11879733)
chr8 (325-459)||(11897015-11897149)
chr8 (325-458)||(17646993-17647126)
chr8 (103-242)||(17566313-17566452)
chr8 (325-459)||(22910198-22910332)
chr8 (103-243)||(22909979-22910118)
chr8 (325-409)||(23142224-23142308)
chr8 (325-457)||(29384313-29384444)
chr8 (103-258)||(15761133-15761289)
chr8 (325-412)||(6810868-6810954)
chr8 (102-247)||(23142384-23142529)
chr8 (383-459)||(477101-477177)
chr8 (326-439)||(32424354-32424464)
chr8 (104-245)||(3094020-3094159)
chr8 (103-247)||(7489058-7489202)
chr8 (356-460)||(15761466-15761570)
chr8 (121-247)||(24056363-24056489)
chr8 (103-247)||(31424377-31424518)
chr8 (103-258)||(11879798-11879954)
chr8 (103-258)||(11897214-11897370)
chr8 (355-459)||(24056594-24056698)
chr8 (325-460)||(27836460-27836595)
chr8 (160-247)||(32424544-32424631)
chr8 (137-247)||(45403240-45403349)
chr8 (103-243)||(24414062-24414202)
chr8 (182-240)||(5922265-5922323)
chr8 (186-247)||(8582253-8582314)
chr8 (325-410)||(7489279-7489368)
chr8 (163-258)||(15294867-15294963)
chr8 (163-258)||(15475236-15475332)
chr8 (325-360)||(29384205-29384240)
chr8 (325-369)||(9212251-9212295)
chr8 (395-459)||(17788372-17788436)
chr8 (325-360)||(17647198-17647233)
chr8 (326-408)||(15231774-15231856)
chr8 (121-258)||(19704250-19704388)
chr8 (422-460)||(27672308-27672346)
chr8 (331-360)||(15761257-15761286)
[»] chr6 (53 HSPs)
chr6 (325-459)||(27233273-27233407)
chr6 (325-459)||(30912408-30912542)
chr6 (333-459)||(6943464-6943590)
chr6 (325-458)||(15528106-15528239)
chr6 (325-458)||(17250057-17250190)
chr6 (325-458)||(26053292-26053425)
chr6 (325-458)||(26073345-26073478)
chr6 (107-258)||(23898009-23898160)
chr6 (325-460)||(21354746-21354873)
chr6 (329-460)||(10509023-10509154)
chr6 (325-460)||(19748331-19748466)
chr6 (121-247)||(2912054-2912180)
chr6 (325-459)||(11327567-11327701)
chr6 (325-459)||(23897810-23897944)
chr6 (325-450)||(22498881-22499006)
chr6 (326-458)||(7918378-7918510)
chr6 (103-257)||(30912181-30912336)
chr6 (325-459)||(17543736-17543870)
chr6 (325-459)||(7223518-7223645)
chr6 (325-459)||(17103201-17103328)
chr6 (103-258)||(19748531-19748687)
chr6 (103-258)||(22498215-22498371)
chr6 (103-258)||(11327337-11327493)
chr6 (103-258)||(17103393-17103549)
chr6 (101-247)||(3573672-3573819)
chr6 (355-460)||(18491063-18491168)
chr6 (103-258)||(7223713-7223869)
chr6 (163-258)||(17543565-17543661)
chr6 (326-455)||(2912245-2912373)
chr6 (106-258)||(26053074-26053227)
chr6 (106-258)||(26073127-26073280)
chr6 (183-247)||(4841684-4841748)
chr6 (160-258)||(7918182-7918281)
chr6 (164-247)||(15527946-15528029)
chr6 (197-245)||(10508886-10508934)
chr6 (381-456)||(3573984-3574059)
chr6 (160-219)||(27890624-27890683)
chr6 (379-460)||(5422798-5422879)
chr6 (146-219)||(20432411-20432484)
chr6 (163-247)||(27233134-27233218)
chr6 (366-432)||(18490998-18491064)
chr6 (356-412)||(4841946-4842002)
chr6 (325-360)||(4841722-4841757)
chr6 (325-360)||(7918243-7918278)
chr6 (325-360)||(17103396-17103431)
chr6 (325-360)||(17543623-17543658)
chr6 (325-360)||(19748534-19748569)
chr6 (325-360)||(22498333-22498368)
chr6 (325-360)||(26053189-26053224)
chr6 (325-360)||(26073242-26073277)
chr6 (329-359)||(21354942-21354972)
chr6 (137-207)||(23506092-23506162)
chr6 (366-455)||(33583766-33583855)
[»] chr1 (56 HSPs)
chr1 (325-460)||(13100189-13100324)
chr1 (325-460)||(9352059-9352194)
chr1 (332-459)||(21846271-21846398)
chr1 (325-459)||(9955031-9955165)
chr1 (325-458)||(23528656-23528789)
chr1 (325-459)||(18304807-18304941)
chr1 (325-459)||(9327211-9327345)
chr1 (325-457)||(42180061-42180193)
chr1 (325-458)||(13276262-13276395)
chr1 (325-456)||(12513283-12513414)
chr1 (325-456)||(19009942-19010073)
chr1 (105-246)||(32881531-32881672)
chr1 (103-255)||(41032548-41032701)
chr1 (325-459)||(25146765-25146898)
chr1 (325-459)||(41032666-41032800)
chr1 (103-243)||(30619156-30619294)
chr1 (103-247)||(12513488-12513625)
chr1 (325-459)||(17055995-17056129)
chr1 (160-258)||(17055751-17055850)
chr1 (160-258)||(23528854-23528953)
chr1 (326-451)||(16125452-16125580)
chr1 (137-258)||(47786056-47786178)
chr1 (325-458)||(9128836-9128969)
chr1 (104-245)||(21846050-21846191)
chr1 (160-247)||(16125287-16125374)
chr1 (354-459)||(18337547-18337651)
chr1 (103-258)||(13100388-13100544)
chr1 (371-458)||(12800623-12800710)
chr1 (103-242)||(14074258-14074397)
chr1 (325-412)||(17869746-17869833)
chr1 (158-256)||(18304641-18304740)
chr1 (383-458)||(30619075-30619150)
chr1 (103-258)||(25146543-25146700)
chr1 (158-222)||(21242857-21242921)
chr1 (107-247)||(16434721-16434859)
chr1 (160-258)||(19009780-19009879)
chr1 (354-461)||(24117004-24117111)
chr1 (363-458)||(14074404-14074499)
chr1 (188-247)||(18228474-18228533)
chr1 (103-247)||(9351838-9351982)
chr1 (325-381)||(18228278-18228333)
chr1 (325-369)||(32881416-32881460)
chr1 (136-247)||(17869558-17869669)
chr1 (188-247)||(27917232-27917291)
chr1 (137-208)||(39845064-39845135)
chr1 (366-460)||(27502239-27502333)
chr1 (202-247)||(13276140-13276185)
chr1 (182-245)||(9128692-9128755)
chr1 (854-913)||(9687519-9687577)
chr1 (325-360)||(13100391-13100426)
chr1 (325-360)||(18304704-18304739)
chr1 (325-360)||(23528857-23528892)
chr1 (325-360)||(25146596-25146631)
chr1 (160-257)||(9954865-9954963)
chr1 (103-209)||(42179846-42179952)
chr1 (354-455)||(27917477-27917578)
[»] chr2 (39 HSPs)
chr2 (325-459)||(30432418-30432552)
chr2 (325-459)||(1404782-1404916)
chr2 (329-459)||(23863321-23863451)
chr2 (325-459)||(31237973-31238107)
chr2 (325-459)||(36429847-36429981)
chr2 (325-457)||(35565950-35566082)
chr2 (103-258)||(13502449-13502604)
chr2 (325-459)||(20063713-20063847)
chr2 (119-246)||(16766996-16767124)
chr2 (325-459)||(15588846-15588979)
chr2 (103-247)||(19262091-19262235)
chr2 (121-258)||(15588648-15588785)
chr2 (332-458)||(19491855-19491982)
chr2 (103-219)||(19245827-19245943)
chr2 (103-258)||(20063921-20064077)
chr2 (325-409)||(25539222-25539306)
chr2 (140-258)||(35565766-35565888)
chr2 (160-247)||(25538977-25539064)
chr2 (352-462)||(1690785-1690895)
chr2 (326-456)||(31578007-31578136)
chr2 (163-247)||(1404993-1405077)
chr2 (107-258)||(31237755-31237907)
chr2 (163-258)||(30433013-30433109)
chr2 (136-233)||(29661093-29661189)
chr2 (325-360)||(13502566-13502601)
chr2 (325-375)||(1690724-1690774)
chr2 (353-459)||(15266081-15266187)
chr2 (146-216)||(20034040-20034110)
chr2 (182-247)||(1690582-1690647)
chr2 (355-412)||(5395674-5395731)
chr2 (103-239)||(8428440-8428576)
chr2 (407-459)||(19245152-19245204)
chr2 (142-245)||(27407003-27407107)
chr2 (356-412)||(31023269-31023325)
chr2 (326-358)||(34841784-34841816)
chr2 (160-219)||(974576-974635)
chr2 (160-258)||(36430046-36430145)
chr2 (364-458)||(16766710-16766804)
chr2 (366-412)||(34841602-34841648)
[»] chr5 (38 HSPs)
chr5 (325-458)||(43234868-43235001)
chr5 (325-459)||(19578941-19579075)
chr5 (325-460)||(21059152-21059286)
chr5 (325-459)||(18051526-18051660)
chr5 (333-458)||(20923718-20923843)
chr5 (325-457)||(18843716-18843848)
chr5 (325-460)||(22645715-22645850)
chr5 (326-457)||(23172425-23172560)
chr5 (325-458)||(38158250-38158383)
chr5 (103-247)||(27339962-27340106)
chr5 (327-409)||(20320992-20321074)
chr5 (325-409)||(19979648-19979732)
chr5 (104-258)||(18843913-18844068)
chr5 (332-450)||(27340189-27340307)
chr5 (384-456)||(19042444-19042516)
chr5 (163-258)||(20321141-20321237)
chr5 (163-247)||(43235078-43235162)
chr5 (165-247)||(23172265-23172347)
chr5 (325-447)||(41688661-41688782)
chr5 (162-247)||(43005693-43005778)
chr5 (137-257)||(24648216-24648329)
chr5 (146-256)||(19042246-19042356)
chr5 (150-257)||(21058978-21059087)
chr5 (182-258)||(38158118-38158195)
chr5 (163-258)||(19579141-19579237)
chr5 (103-167)||(19979858-19979922)
chr5 (103-222)||(19377838-19377957)
chr5 (182-247)||(41688520-41688585)
chr5 (184-239)||(26021537-26021592)
chr5 (103-219)||(13341472-13341588)
chr5 (200-247)||(18051405-18051452)
chr5 (325-360)||(18843916-18843951)
chr5 (325-360)||(20321144-20321179)
chr5 (325-359)||(19042414-19042448)
chr5 (326-360)||(19579144-19579178)
chr5 (329-358)||(15446402-15446431)
chr5 (182-219)||(30799635-30799672)
chr5 (325-358)||(43005752-43005785)
[»] chr4 (54 HSPs)
chr4 (325-458)||(9770112-9770245)
chr4 (325-464)||(5361959-5362098)
chr4 (325-460)||(8889226-8889361)
chr4 (325-458)||(8011212-8011345)
chr4 (326-459)||(13023566-13023702)
chr4 (325-459)||(10142898-10143032)
chr4 (103-247)||(6346730-6346874)
chr4 (103-245)||(37240450-37240593)
chr4 (325-459)||(13551618-13551752)
chr4 (325-456)||(5375666-5375797)
chr4 (103-257)||(17466278-17466433)
chr4 (325-459)||(23064959-23065093)
chr4 (325-459)||(37240261-37240390)
chr4 (325-457)||(17466080-17466212)
chr4 (137-243)||(5361774-5361880)
chr4 (325-411)||(9911407-9911493)
chr4 (325-459)||(36120823-36120957)
chr4 (103-243)||(10394824-10394964)
chr4 (354-457)||(7044728-7044831)
chr4 (160-247)||(8010968-8011055)
chr4 (146-245)||(10143112-10143211)
chr4 (103-224)||(18459406-18459527)
chr4 (160-258)||(36121021-36121120)
chr4 (137-235)||(5943068-5943166)
chr4 (355-458)||(4156763-4156866)
chr4 (160-247)||(9911243-9911330)
chr4 (160-247)||(23064793-23064880)
chr4 (103-209)||(8889465-8889570)
chr4 (365-459)||(24719516-24719610)
chr4 (103-247)||(24719785-24719922)
chr4 (103-224)||(7452739-7452859)
chr4 (354-459)||(18459733-18459838)
chr4 (354-454)||(7815561-7815661)
chr4 (103-247)||(9770322-9770466)
chr4 (160-258)||(5375863-5375962)
chr4 (110-215)||(4157269-4157377)
chr4 (110-215)||(4157556-4157664)
chr4 (353-459)||(6347088-6347194)
chr4 (103-246)||(7045153-7045298)
chr4 (354-459)||(7452419-7452523)
chr4 (163-258)||(7044961-7045057)
chr4 (179-245)||(9149573-9149640)
chr4 (325-360)||(4157053-4157088)
chr4 (160-222)||(55476223-55476285)
chr4 (354-393)||(7803071-7803110)
chr4 (325-360)||(36121024-36121059)
chr4 (425-459)||(610686-610720)
chr4 (325-359)||(5361858-5361892)
chr4 (325-359)||(6346848-6346882)
chr4 (326-359)||(7452772-7452805)
chr4 (327-360)||(10143166-10143199)
chr4 (160-245)||(13551504-13551589)
chr4 (325-354)||(24719782-24719811)
chr4 (327-360)||(37240505-37240538)
[»] chr7 (67 HSPs)
chr7 (325-459)||(27221417-27221551)
chr7 (325-459)||(24725473-24725607)
chr7 (325-458)||(4247356-4247489)
chr7 (325-458)||(22687660-22687793)
chr7 (325-458)||(11326386-11326519)
chr7 (325-458)||(24990067-24990200)
chr7 (103-255)||(39182357-39182510)
chr7 (325-456)||(8346529-8346660)
chr7 (325-459)||(7730339-7730472)
chr7 (329-459)||(14055250-14055380)
chr7 (329-459)||(14365278-14365408)
chr7 (325-459)||(39182259-39182392)
chr7 (326-459)||(8330042-8330175)
chr7 (334-451)||(8571250-8571367)
chr7 (102-258)||(14055455-14055611)
chr7 (102-258)||(14365483-14365639)
chr7 (325-458)||(44944841-44944978)
chr7 (325-460)||(8343796-8343931)
chr7 (325-460)||(26281306-26281440)
chr7 (325-459)||(9685240-9685374)
chr7 (325-457)||(5058530-5058662)
chr7 (121-246)||(8329772-8329897)
chr7 (106-243)||(8343580-8343717)
chr7 (325-418)||(17811387-17811480)
chr7 (325-458)||(5715290-5715422)
chr7 (103-247)||(1977759-1977902)
chr7 (103-258)||(26565323-26565479)
chr7 (336-458)||(21846433-21846554)
chr7 (102-224)||(22687041-22687163)
chr7 (103-258)||(11325177-11325332)
chr7 (103-258)||(17811546-17811702)
chr7 (136-258)||(7730167-7730290)
chr7 (355-458)||(30294175-30294275)
chr7 (325-449)||(11324988-11325111)
chr7 (103-247)||(11326493-11326637)
chr7 (325-452)||(20570881-20571002)
chr7 (172-239)||(27509256-27509323)
chr7 (325-403)||(1977707-1977785)
chr7 (158-258)||(8329874-8329975)
chr7 (106-246)||(8346244-8346384)
chr7 (183-258)||(24725327-24725403)
chr7 (160-247)||(44944677-44944764)
chr7 (137-258)||(21846256-21846378)
chr7 (325-438)||(27509939-27510052)
chr7 (163-247)||(20570720-20570804)
chr7 (160-247)||(5715495-5715582)
chr7 (183-258)||(4247554-4247630)
chr7 (103-247)||(26617252-26617396)
chr7 (160-258)||(24989606-24989704)
chr7 (158-258)||(8346361-8346462)
chr7 (103-247)||(5058739-5058882)
chr7 (179-247)||(6916989-6917056)
chr7 (160-247)||(27221624-27221711)
chr7 (325-394)||(6916846-6916913)
chr7 (141-215)||(17741886-17741960)
chr7 (158-219)||(21157523-21157584)
chr7 (329-440)||(26617472-26617587)
chr7 (182-258)||(30294444-30294521)
chr7 (148-205)||(48621475-48621532)
chr7 (325-360)||(4247557-4247592)
chr7 (103-170)||(10285678-10285745)
chr7 (325-360)||(24725365-24725400)
chr7 (326-360)||(17811549-17811583)
chr7 (327-360)||(1977814-1977847)
chr7 (158-219)||(4574968-4575029)
chr7 (160-245)||(9685126-9685211)
chr7 (851-888)||(36071571-36071608)
[»] scaffold0186 (3 HSPs)
scaffold0186 (325-459)||(8442-8576)
scaffold0186 (160-258)||(8639-8738)
scaffold0186 (325-360)||(8642-8677)
[»] scaffold0042 (3 HSPs)
scaffold0042 (107-258)||(93483-93636)
scaffold0042 (325-459)||(93702-93834)
scaffold0042 (326-360)||(93599-93633)
[»] scaffold0417 (2 HSPs)
scaffold0417 (325-460)||(7451-7586)
scaffold0417 (162-247)||(7289-7374)
[»] scaffold0603 (3 HSPs)
scaffold0603 (144-258)||(8775-8890)
scaffold0603 (358-459)||(9049-9150)
scaffold0603 (331-360)||(8858-8887)
[»] scaffold0534 (1 HSPs)
scaffold0534 (103-242)||(885-1024)
[»] scaffold0510 (2 HSPs)
scaffold0510 (140-255)||(16-131)
scaffold0510 (325-459)||(96-231)
[»] scaffold0048 (3 HSPs)
scaffold0048 (102-247)||(61088-61233)
scaffold0048 (182-247)||(48516-48581)
scaffold0048 (366-459)||(48825-48918)
[»] scaffold0016 (2 HSPs)
scaffold0016 (163-258)||(56260-56356)
scaffold0016 (325-360)||(56318-56353)
[»] scaffold0028 (1 HSPs)
scaffold0028 (103-222)||(145823-145942)
[»] scaffold0036 (1 HSPs)
scaffold0036 (354-459)||(37191-37296)
[»] scaffold0150 (1 HSPs)
scaffold0150 (149-247)||(33143-33246)
[»] scaffold2084 (1 HSPs)
scaffold2084 (103-197)||(88-182)
[»] scaffold0115 (1 HSPs)
scaffold0115 (373-458)||(35103-35188)
[»] scaffold0001 (1 HSPs)
scaffold0001 (158-219)||(142867-142928)


Alignment Details
Target: chr3 (Bit Score: 351; Significance: 0; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 633 - 1057
Target Start/End: Original strand, 8161112 - 8161544
Alignment:
Q  633 agacaatgcacaagttcaaaattcatggaggattgtagagcaaaagagataagggtaaaatgttgagtgctccttctacatatgtcgttattcgtcagaa 732  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  8161112 agacaatgcacaagttcaaaattcatggaggattgtagagcaaaatagataagggtaaaatgttgagtgctccttctacatatgtagttattcgtcaaaa 8161211  T
Q  733 tgatcttttactctttgaagacgatgttgatgataaagtgaagtaatgcgagactttggatcaagggagaatatgttatgtcaaagtagatattcatcca 832  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8161212 taatcttttactctttgaagacgatgttgatgataaagtgaagtaatgcgaaactttggatcaagggagaatatgttatgtcaaagtagatattcatcca 8161311  T
Q  833 aaataccacattgaagagttattataaatatgaagagttaatttgaattttctttaccacaactactttagtctattgggtgtactagacgcttgcttag 932  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8161312 aagtaccacattgaagagttattataaatatgaagagttaatttgaattttctttaccacaactactttagtctattgggtgtactagacgcttgcttag 8161411  T
Q  933 ttgtttgtca-gagtgaatttacaatttttccccacaaa--ttttagttgagagagtttgcaagtctgtaaaa--taca-tagtag-tgatggggtttcc 1025  Q
    |||||||||| |||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||  |||| |||||| |||||||||||||    
T  8161412 ttgtttgtcatgagtgaattttcaatttttccccacaaaatttttagttgagagagtttgcaagtctgtaaaaattacattagtagttgatggggtttcc 8161511  T
Q  1026 gattttgtttctgc-aaattgtatgataggatt 1057  Q
    |||||||||||||| ||||||||||||||||||    
T  8161512 gattttgtttctgcaaaattgtatgataggatt 8161544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 325 - 640
Target Start/End: Original strand, 8156126 - 8156442
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtcta-ttttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctg 423  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||| || |||||  |||    
T  8156126 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctaattttgggattatactatggatttgagtcattgaaggtgaaaaaaatcgtaaaattctg 8156225  T
Q  424 gattttagaatttaagttgggattttgacaacaatggacgacattcaatatttcctttcttagtgtaatgttnnnnnnntaaaattgcactttgtaaaat 523  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||       || ||||||||||||||||||    
T  8156226 aattttagaatttaagttgggattttgacaacaatggacgacattcaatatttcctttcgtagtataatgttaaaaaaatacaattgcactttgtaaaat 8156325  T
Q  524 cgggattatatttgctagtttccatcttattcttttctaaatgcatgtttagcaacatttgagattgatgcttctttgtttgatgagagaatgcatttct 623  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8156326 cgggattatatttgctagtttccatcttattcttttttaaatgcatgtttagcaacatttgagattgatgcttctttgtatgatgagagaatgcatttct 8156425  T
Q  624 ccgaccttaagacaatg 640  Q
    |||||||||||||||||    
T  8156426 ccgaccttaagacaatg 8156442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 8 - 258
Target Start/End: Original strand, 8155809 - 8156059
Alignment:
Q  8 tattgcttagtacacctaggtttagcatattcctattggagccttgtactttgaatatagtttgattatgttttcatttgacaaaggacgacataaaggt 107  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||||    
T  8155809 tattgcttagtacacctaggtttagcatattcctattgcagccttgtattttgaatatagtttgattatgttttcatctgacaaaggataacataaaggt 8155908  T
Q  108 tgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgt 207  Q
    ||||||||| |||||||||||||| |||  |||||||||||||||| ||||||| |||||||| || |||||| ||||||||||||||||||||||||||    
T  8155909 tgtcaaaattagaattttgcttcaggtggtaagagaagagcaaaatggacaatcataaaatcgcaactaagatcgaaggattttactcaactacttttgt 8156008  T
Q  208 agcatcgatataagaaactgtaaaatcgcaatcaaaatcgtggattttacc 258  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  8156009 agcattgatataagaaactgtaaaatcgcaatcaatatcgtggattttacc 8156059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 325 - 461
Target Start/End: Complemental strand, 29067417 - 29067281
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||     
T  29067417 gaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 29067318  T
Q  425 attttagaatttaagttgggattttgacaacaatgga 461  Q
    |||||||||||||||| ||||||||||||||||||||    
T  29067317 attttagaatttaagtcgggattttgacaacaatgga 29067281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 28745903 - 28745769
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||  |||| |||      
T  28745903 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaa 28745804  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||| | ||||||||||||||||||    
T  28745803 attttaggatttaaatcgggattttgacaacaatg 28745769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 20756172 - 20756039
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||| ||||||||||||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||||||| ||  |||| ||||     
T  20756172 gaaatcgtaaaattgcaatcaaaatcgattgattttgcctattttaagattctactatggatttgagtcattgaaggtgaagaaaatcgcaaaatcctga 20756073  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    |||||| ||||||||| |||||||||||||||||    
T  20756072 attttataatttaagtcgggattttgacaacaat 20756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 325 - 455
Target Start/End: Complemental strand, 39428035 - 39427905
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||| |||||||||||   |||| || ||    
T  39428035 gaaatcgtaaaatcgcaatcaaaatcgatggactttgtctattttgggattctactatcgatttgagtcgttgaacgtgaagaaagttgcaaaatccagg 39427936  T
Q  425 attttagaatttaagttgggattttgacaac 455  Q
    |||||| ||||||| | ||||||||||||||    
T  39427935 attttaaaatttaaatcgggattttgacaac 39427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 17064661 - 17064505
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||  | ||||||||||| ||  ||||| |||| |||||| |||||||||||||||| ||| || || |||||||||||||||||||||    
T  17064661 aaggttgtcaaaattgggattttgcttcaggtcgaaagaaaagatcaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaactact 17064562  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| ||| |||||||||| |||||||| ||||||||||||| |||||||||||    
T  17064561 tttgtagaatcaatataagaaattgtaaaattgcaatcaaaatcgatggattttacc 17064505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 30727694 - 30727820
Alignment:
Q  332 taaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttag 431  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||  | ||||||||     
T  30727694 taaaatcgcaatcaaaatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaa 30727793  T
Q  432 aatttaagttgggattttgacaacaat 458  Q
     ||||||||  ||||||||| ||||||    
T  30727794 gatttaagtcaggattttgataacaat 30727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 103 - 258
Target Start/End: Original strand, 3449085 - 3449241
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||  | ||||||||| | ||  ||||||||||||||||| |||||||||||||||| ||  || || ||| ||||||| |||||||||    
T  3449085 aaggttgtcaaaattgggattttgctttaggttgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaatgattttattcaactact 3449184  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| |||||||||||||| |||||||||||||||||||| | |||||||||||    
T  3449185 tttgtagaatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 3449241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 42697201 - 42697046
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||||| ||||||||||| ||  || |||||||| ||||| |||||| ||||||||| || ||| |||||||||||||| |||||||||    
T  42697201 aaggttgtcaaaatcaggattttgcttcaggtcgaatgagaagag-aaaatcgacaattgtaaaatcgcaactaaaattgaaggattttattcaactact 42697103  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| ||||||||||||||   |||| ||||||||||||||| |||||||||||    
T  42697102 tttgtagaatcgatataagaaatcataaactcgcaatcaaaatcgatggattttacc 42697046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 103 - 258
Target Start/End: Original strand, 25870097 - 25870253
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||||||||||   ||||||||| | ||  ||||||||||| ||||| |||||||||||||||| ||  || ||  ||||||||||||||||||      
T  25870097 aaggttgtcaaaatcgagattttgctttaggtcgaaagagaagagtaaaatcgacaatcgtaaaatcgcaaccaaaatcaaaggattttactcaactaag 25870196  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||    
T  25870197 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggattttacc 25870253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 24649684 - 24649818
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttg-tctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctg 423  Q
    |||||||||||||| || ||||||| |||| |||||| | |||||||| ||||||||||||||||||||| |||||||||||| |||||| |||| |||     
T  24649684 gaaatcgtaaaatcacagtcaaaattgatgaattttgctttattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatccta 24649783  T
Q  424 gattttagaatttaagttgggattttgacaacaat 458  Q
    |||||||  |||||||| |||||||||||||||||    
T  24649784 gattttacgatttaagtcgggattttgacaacaat 24649818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 106 - 258
Target Start/End: Complemental strand, 27676787 - 27676634
Alignment:
Q  106 gttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactactttt 205  Q
    ||||| |||||||| ||||||||||||||  |||| |||||||||||| || |||| |||||||| ||| || || ||| ||||||||||||||||||||    
T  27676787 gttgttaaaatcaggattttgcttcaagtcgaaagggaagagcaaaatcgaaaatcttaaaatcgcaatcaaaatcgaaagattttactcaactactttt 27676688  T
Q  206 gtagcatcgatataagaaactgtaaaatcgcaatcaaaatc-gtggattttacc 258  Q
    |||  ||||||||||||||  |||||||| |||||||||||  |||||||||||    
T  27676687 gtaaaatcgatataagaaatcgtaaaatcacaatcaaaatcaatggattttacc 27676634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 325 - 457
Target Start/End: Original strand, 3449288 - 3449419
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||| |||||| |||||||||| ||||||| |||||||||||| ||||| || | |||||||| |||||||||  |||| ||||     
T  3449288 gaaatcgtaaaatcgcaataaaaatctatggattttgcctattttaggattctactatagattttag-cgttgaaggtaaagaaagtcgcaaaatcctga 3449386  T
Q  425 attttagaatttaagttgggattttgacaacaa 457  Q
    ||||||| |||||||| ||||||||||||||||    
T  3449387 attttaggatttaagtcgggattttgacaacaa 3449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 333 - 449
Target Start/End: Complemental strand, 21963554 - 21963438
Alignment:
Q  333 aaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttaga 432  Q
    |||||||| ||||||||||||||||||||  |||||| ||||| ||||||||||||||||| || ||||||||||||||| ||||| | || |||||||     
T  21963554 aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttagg 21963455  T
Q  433 atttaagttgggatttt 449  Q
    |||||||| ||||||||    
T  21963454 atttaagtcgggatttt 21963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 333 - 449
Target Start/End: Complemental strand, 21985990 - 21985874
Alignment:
Q  333 aaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttaga 432  Q
    |||||||| ||||||||||||||||||||  |||||| ||||| ||||||||||||||||| || ||||||||||||||| ||||| | || |||||||     
T  21985990 aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttgaattttagg 21985891  T
Q  433 atttaagttgggatttt 449  Q
    |||||||| ||||||||    
T  21985890 atttaagtcgggatttt 21985874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 102 - 258
Target Start/End: Original strand, 10872489 - 10872646
Alignment:
Q  102 aaaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactac 201  Q
    |||||||||||||||||| ||||| ||||| || ||||| |||||| |||||  | |||| |||||||| ||| || |||||||||||||||| ||||||    
T  10872489 aaaggttgtcaaaatcaggattttacttcaggtcaaaagggaagagaaaaatcaaaaatcataaaatcgcaatcaaaattgaaggattttactaaactac 10872588  T
Q  202 ttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||| || ||||||||||||||  ||||||||  ||| ||||| | |||||||||||    
T  10872589 ttttgaagaatcgatataagaaatcgtaaaatcagaataaaaattgatggattttacc 10872646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 13286298 - 13286142
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||||||||||| |||||||||||| ||   ||| |||||| |||||  | | ||||||||||| ||| || ||  || |||||||||||||||||    
T  13286298 aaggttgtcaaaatcacaattttgcttcaggtcggaagggaagagaaaaatcaaaactcgtaaaatcgcaatcaaaatcaaaagattttactcaactact 13286199  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| ||||||||||||||  |||||||| |||| ||||||| |||||||||||    
T  13286198 tttgtagaatcgatataagaaatcgtaaaatcacaatgaaaatcgatggattttacc 13286142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 325 - 453
Target Start/End: Complemental strand, 17064454 - 17064326
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| | ||||||||||| ||| ||||| ||||||||||| | | ||  |||| ||||     
T  17064454 gaaatcgtaaaatcgcaataaaaatcgatgaattttgtctattttagaattctactatgaattggagtcgttgaaggtgaacacaatcgcaaaatcctga 17064355  T
Q  425 attttagaatttaagttgggattttgaca 453  Q
    ||||||  |||||||| ||||||||||||    
T  17064354 attttaagatttaagtcgggattttgaca 17064326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 103 - 258
Target Start/End: Original strand, 24619972 - 24620128
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| ||| ||| |||||||| ||||| ||| |||||||| |  | | ||||||||| ||| || || ||||||||||||||||  |||    
T  24619972 aaggttgtcaaaatcggaactttacttcaagtcaaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaagact 24620071  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| |||||||||  ||| |||||||||||||||||||| | |||||||||||    
T  24620072 tttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaattgttggattttacc 24620128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 328 - 443
Target Start/End: Original strand, 22494780 - 22494895
Alignment:
Q  328 atcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggatt 427  Q
    ||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||| |||| ||||||||||| ||||||  |||| |   ||||    
T  22494780 atcgtaaaatcgcaatcaaaatcgatgaattttgtttattttaggattctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatctcagatt 22494879  T
Q  428 ttagaatttaagttgg 443  Q
    |||| |||||||||||    
T  22494880 ttaggatttaagttgg 22494895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 24620196 - 24620333
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcat---aaaaacc 421  Q
    ||||||||||||| ||||| |||||||||| |||||| |||||||| ||||||||| || ||||||||| |||||||||||||||||| |   |||| |     
T  24620196 gaaatcgtaaaattgcaattaaaatcgatgaattttgcctattttgagattctactgtgaatttgagtcgttgaaggtgaagaaagtcgtcgcaaaatct 24620295  T
Q  422 tggattttagaatttaagttgggattttgacaacaatg 459  Q
    |  ||||||| |||||||| || |||||||||||||||    
T  24620296 taaattttaggatttaagtcggaattttgacaacaatg 24620333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 28136116 - 28135973
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||||||||| || ||||| |||||||| ||||  | |||| ||||| || |||||||||||||  || || || |||||||||||||||||||||    
T  28136116 aaggttgtcaaaattaggattttacttcaagttaaaatggtagagtaaaatcgagaatcgtaaaatcgctatcaaaatcgaaggattttactcaactact 28136017  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatc 246  Q
    ||||||  || ||||||||||| |||||||| | ||||||||||    
T  28136016 tttgtaaaattgatataagaaattgtaaaataggaatcaaaatc 28135973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 333 - 458
Target Start/End: Complemental strand, 22137403 - 22137278
Alignment:
Q  333 aaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttaga 432  Q
    ||||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||| | || ||||||||||||||| ||| | | || |||||||     
T  22137403 aaaatcgcaattaaaatcgatggattttgcatattttgggattttactatggatttgaggcgttcaaggtgaagaaagtcgtaacatcttgaattttagg 22137304  T
Q  433 atttaagttgggattttgacaacaat 458  Q
    ||||||||  ||||||| | ||||||    
T  22137303 atttaagtcaggattttaaaaacaat 22137278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 107 - 258
Target Start/End: Original strand, 6136348 - 6136500
Alignment:
Q  107 ttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttg 206  Q
    |||||||||||| ||||||||||||  |   ||| ||| ||||||||  | ||||||||||||| ||| || ||  || ||||||||||||||||||||     
T  6136348 ttgtcaaaatcacaattttgcttcatatcggaagggaaaagcaaaatcaaaaatcgtaaaatcgcaatcaaaatcaaaagattttactcaactactttta 6136447  T
Q  207 tagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||| ||||||||||||||  |||||||| |||||||||||| |||||||||||    
T  6136448 tagaatcgatataagaaatcgtaaaatcacaatcaaaatcgatggattttacc 6136500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 103 - 247
Target Start/End: Original strand, 9152761 - 9152903
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||||| ||||||||| | ||  ||||||||||| |||||  ||||||||||||||||||  || || ||| ||||| ||||||||| |    
T  9152761 aaggttgtcaaaatcaggattttgctt-aggtcgaaagagaagagtaaaatcaacaatcgtaaaatcgtaaccaaaatcgaaagatttgactcaactatt 9152859  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||| |||||| || |||| ||||||||| ||||||||||||    
T  9152860 tttgtagaatcgat-tatgaaattgtaaaatcacaatcaaaatcg 9152903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 25870363 - 25870506
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatc-----gatggattttgtctattttgggattctactatggatttgagtcatt----gaaggtgaagaaagtcata 415  Q
    ||||||||||||||||||||||||||     ||||||||||| |||||||| | |||||||| | ||||||||| ||    |||| |||||||||||| |    
T  25870363 gaaatcgtaaaatcgcaatcaaaatcaaatcgatggattttgcctattttgaggttctactacgaatttgagtcgttcgttgaagatgaagaaagtcaca 25870462  T
Q  416 aaaacctggattttagaatttaagttgggattttgacaacaatg 459  Q
    ||| | |||||||||| |||||||| | ||||||||||||||||    
T  25870463 aaatcttggattttaggatttaagtcgagattttgacaacaatg 25870506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 41671533 - 41671427
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | ||||||||||| ||  ||||||||||||||||| || ||| ||||||||| ||  || || |||||||||||||||||||||    
T  41671533 aaggttgtcaaaatcgggattttgcttcaggtcgaaagagaagagcaaaatcgataattgtaaaatcgcaaccaaaatcgaaggattttactcaactact 41671434  T
Q  203 tttgtag 209  Q
    |||||||    
T  41671433 tttgtag 41671427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 354 - 459
Target Start/End: Original strand, 15806531 - 15806635
Alignment:
Q  354 ggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgaca 453  Q
    |||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||||  ||||  ||||||| ||| ||||||| | |||||||||||    
T  15806531 ggattttgcctgttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaag-tcggattttgaca 15806629  T
Q  454 acaatg 459  Q
    ||||||    
T  15806630 acaatg 15806635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 354 - 459
Target Start/End: Complemental strand, 27676460 - 27676355
Alignment:
Q  354 ggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgaca 453  Q
    |||||||  ||||||||||||||| ||||||||||||||||| ||||||||| ||||||  |||| |||| ||||||  ||||||||  |||||||||||    
T  27676460 ggattttacctattttgggattctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgaca 27676361  T
Q  454 acaatg 459  Q
    ||||||    
T  27676360 acaatg 27676355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 28746130 - 28745974
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||  | | ||| ||||| ||  ||||| || |||||||| |  | ||||||||||| ||| || || |||| |||||||||||  |||    
T  28746130 aaggttgtcaaaattgggactttacttcaggtcgaaagaaaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaagaattttactcaagaact 28746031  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  28746030 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 28745974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 20756319 - 20756220
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||||||| ||| || |||||| ||||||||||||  | |||||||| ||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  20756319 tcgtaaaatcgcaatcaaaattgaaagattttactcaaggatttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 20756220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 42696980 - 42696920
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatgga 385  Q
    |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||    
T  42696980 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgagattctactatgga 42696920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 103 - 233
Target Start/End: Original strand, 15515033 - 15515163
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||| |||||| | ||||||||||| ||  ||||||| || |||||| |||||| |||||||| ||| ||| || |||| ||||||||||||||||    
T  15515033 aaggttgttaaaatcgggattttgcttcaggttgaaagagatgaccaaaatcgacaattgtaaaatcttaactaaaatcgaagtattttactcaactact 15515132  T
Q  203 tttgtagcatcgatataagaaactgtaaaat 233  Q
    ||| ||| |||  || |||||| ||||||||    
T  15515133 tttatagaatcattagaagaaattgtaaaat 15515163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 325 - 462
Target Start/End: Original strand, 22356048 - 22356186
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtg-aagaaagtcataaaaacctg 423  Q
    |||||||||||||||||||||||||  ||||||||||  |||||| ||||||||||||| |||  | |  |||||| || || ||| || ||||| ||||    
T  22356048 gaaatcgtaaaatcgcaatcaaaattcatggattttgcttattttaggattctactatgaattcaaattgttgaagctgaaaaaaaatcttaaaatcctg 22356147  T
Q  424 gattttagaatttaagttgggattttgacaacaatggac 462  Q
     ||||||| |||||||| || ||||||| ||||||||||    
T  22356148 aattttaggatttaagtcggaattttgataacaatggac 22356186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 358 - 459
Target Start/End: Complemental strand, 17796368 - 17796267
Alignment:
Q  358 tttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaa 457  Q
    |||||||||||| ||||||| ||||| |||| |||  ||||||||||| ||||||| |||| ||| |||||||  ||||||||||| |||||||||| ||    
T  17796368 tttgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataa 17796269  T
Q  458 tg 459  Q
    ||    
T  17796268 tg 17796267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 358 - 459
Target Start/End: Complemental strand, 17796477 - 17796376
Alignment:
Q  358 tttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaa 457  Q
    |||||||||||| ||||||| ||||| ||||||||  |||||| |||| |||||| ||||| ||| |||||||  |||||||| || |||||||||||||    
T  17796477 tttgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaa 17796378  T
Q  458 tg 459  Q
    ||    
T  17796377 tg 17796376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 358 - 459
Target Start/End: Complemental strand, 19104808 - 19104707
Alignment:
Q  358 tttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaa 457  Q
    |||||||||||| ||||||| ||||| |||| |||  ||||||||||| ||||||| |||| ||| |||||||  ||||||||||| |||||||||| ||    
T  19104808 tttgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataa 19104709  T
Q  458 tg 459  Q
    ||    
T  19104708 tg 19104707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 358 - 459
Target Start/End: Complemental strand, 19104917 - 19104816
Alignment:
Q  358 tttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaa 457  Q
    |||||||||||| ||||||| ||||| ||||||||  |||||| |||| |||||| ||||| ||| |||||||  |||||||| || |||||||||||||    
T  19104917 tttgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaa 19104818  T
Q  458 tg 459  Q
    ||    
T  19104817 tg 19104816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 354 - 436
Target Start/End: Original strand, 10872971 - 10873053
Alignment:
Q  354 ggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaattt 436  Q
    |||||||| |||||||| |||||| ||||||||||||||| ||||||||||| ||  ||| |||| |||||||||||| ||||    
T  10872971 ggattttgcctattttgagattctgctatggatttgagtcgttgaaggtgaataatatcacaaaatcctggattttaggattt 10873053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 17796873 - 17796779
Alignment:
Q  149 aaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaat 245  Q
    |||||| | ||||||||||| | |||||| || |||| ||||||||||||||||||||||| ||||  ||||||||  ||||||||| |||||||||    
T  17796873 aaaataaaaaatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcg--ataagaaatcgtaaaatcgaaatcaaaat 17796779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 19105313 - 19105219
Alignment:
Q  149 aaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaat 245  Q
    |||||| | ||||||||||| | |||||| || |||| ||||||||||||||||||||||| ||||  ||||||||  ||||||||| |||||||||    
T  19105313 aaaataaaaaatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcg--ataagaaatcgtaaaatcgaaatcaaaat 19105219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 21963751 - 21963630
Alignment:
Q  137 aaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgc 236  Q
    ||||||||||||||||| |||||| ||||||||  ||  || ||| ||| ||||||||||| ||||||| ||| ||||||||||||||  |||||| |      
T  21963751 aaagagaagagcaaaatcgacaatagtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaatcgtaaaaccag 21963652  T
Q  237 aatcaaaatcg-tggattttac 257  Q
    ||||||||| | ||||||||||    
T  21963651 aatcaaaattgatggattttac 21963630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 21986187 - 21986066
Alignment:
Q  137 aaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgc 236  Q
    ||||||||||||||||| |||||| ||||||||  ||  || ||| ||| ||||||||||| ||||||| ||| ||||||||||||||  |||||| |      
T  21986187 aaagagaagagcaaaatcgacaatagtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaatcgtaaaaccag 21986088  T
Q  237 aatcaaaatcg-tggattttac 257  Q
    ||||||||| | ||||||||||    
T  21986087 aatcaaaattgatggattttac 21986066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 39428178 - 39428101
Alignment:
Q  182 gaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||||||||||||  | |||||| | ||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  39428178 gaaggattttactcaaagatttttgtggaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 39428101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 22137628 - 22137476
Alignment:
Q  106 gttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactactttt 205  Q
    ||||||||||||   |||||| |||| ||  |||||||||||||||||   |||| ||||||||  ||  || ||  ||| |||||||||||||||||||    
T  22137628 gttgtcaaaatcgagattttgtttcaggtcgaaagagaagagcaaaatcagcaatagtaaaatcacaaccaaaatcaaagaattttactcaactactttt 22137529  T
Q  206 gtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttac 257  Q
    |||| ||||||||||||||  |||||| |  ||||||||| | ||||||||||    
T  22137528 gtagaatcgatataagaaatcgtaaaaccaaaatcaaaattgatggattttac 22137476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 219
Target Start/End: Original strand, 8592174 - 8592290
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||| ||||| | | ||| ||||||||  ||||  || |||||||| || | ||||||||||| ||| || || ||||||||||||||||  |||    
T  8592174 aaggttgtcgaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 8592273  T
Q  203 tttgtagcatcgatata 219  Q
    ||||||| |||||||||    
T  8592274 tttgtagaatcgatata 8592290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 459
Target Start/End: Complemental strand, 17796586 - 17796485
Alignment:
Q  358 tttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaa 457  Q
    |||||||||||| ||||||| ||||| |||| |||  ||||||||||| ||||||  |||| ||| |||||||  |||||| | |  |||||||||||||    
T  17796586 tttgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaa 17796487  T
Q  458 tg 459  Q
    ||    
T  17796486 tg 17796485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 358 - 459
Target Start/End: Complemental strand, 19105026 - 19104925
Alignment:
Q  358 tttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaa 457  Q
    |||||||||||| ||||||| ||||| |||| |||  ||||||||||| ||||||  |||| ||| |||||||  |||||| | |  |||||||||||||    
T  19105026 tttgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaa 19104927  T
Q  458 tg 459  Q
    ||    
T  19104926 tg 19104925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 29067552 - 29067475
Alignment:
Q  182 gaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||||||||||||  | |||||||| || |||||  |||  |||||||||||||||||||||| |||||||||||    
T  29067552 gaaggattttactcaaggatttttgtagaattgatattggaagttgtaaaatcgcaatcaaaatcgatggattttacc 29067475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 6136462 - 6136497
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    |||||||||||||| |||||||||||||||||||||    
T  6136462 gaaatcgtaaaatcacaatcaaaatcgatggatttt 6136497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 20756258 - 20756223
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  20756258 gaaattgtaaaatcgcaatcaaaatcgatggatttt 20756223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 25870215 - 25870250
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  25870215 gaaattgtaaaatcgcaatcaaaatcgatggatttt 25870250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 28746012 - 28745977
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  28746012 gaaattgtaaaatcgcaatcaaaatcgatggatttt 28745977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 39428139 - 39428104
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  39428139 gaaattgtaaaatcgcaatcaaaatcgatggatttt 39428104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 217
Target Start/End: Complemental strand, 27055443 - 27055333
Alignment:
Q  107 ttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttg 206  Q
    ||||||||||| ||||||| ||||| || |||||  || || ||||| |  ||||||||||||| |||||| |||||| | ||||||| ||  || ||||    
T  27055443 ttgtcaaaatcggaattttacttcaggtaaaaaggaaatagtaaaatcgcaaatcgtaaaatcgcaattaaaattgaaaggttttactaaaaaacatttg 27055344  T
Q  207 tagcatcgata 217  Q
    ||| |||||||    
T  27055343 tagaatcgata 27055333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 379 - 457
Target Start/End: Complemental strand, 28135801 - 28135723
Alignment:
Q  379 ctatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaa 457  Q
    |||||||||||||||| |||| ||||| ||||||  |||| |||| ||||||  |||||| | || |||||||||||||    
T  28135801 ctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgacaacaa 28135723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 17064606 - 17064573
Alignment:
Q  327 aatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    |||||||||||||||||||||||||| |||||||    
T  17064606 aatcgtaaaatcgcaatcaaaatcgaaggatttt 17064573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 331 - 360
Target Start/End: Complemental strand, 29067507 - 29067478
Alignment:
Q  331 gtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||||||||||||||||||||||||||||    
T  29067507 gtaaaatcgcaatcaaaatcgatggatttt 29067478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 3e-51; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 3e-51
Query Start/End: Original strand, 325 - 460
Target Start/End: Complemental strand, 5922182 - 5922047
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||| |||| |||||    
T  5922182 gaaatcgcaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatataagtcgttgaaggtgaagaaagtcacaaaatcctgg 5922083  T
Q  425 attttagaatttaagttgggattttgacaacaatgg 460  Q
    ||||||| |||||||| |||||||||||||||||||    
T  5922082 attttaggatttaagtcgggattttgacaacaatgg 5922047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 31424296 - 31424162
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||| | |||||||||| ||||| ||||     
T  31424296 gaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttgggattcttctatggatttgagtcgttgaaagggaagaaagtcgtaaaatcctga 31424197  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||||||||||||  |||||||||||| ||||    
T  31424196 attttagaatttaagtcaggattttgacaataatg 31424162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 325 - 456
Target Start/End: Original strand, 19704451 - 19704583
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacc-tg 423  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||| ||||||||||||||||||  ||||||| ||    
T  19704451 gaaatcgtaaaattgcaatcaaaatcgatggattttgcctattatggaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaaaccttg 19704550  T
Q  424 gattttagaatttaagttgggattttgacaaca 456  Q
     ||||||  ||||||||||||||||||||||||    
T  19704551 aattttaagatttaagttgggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 17647352 - 17647197
Alignment:
Q  102 aaaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactac 201  Q
    ||||||||| |||||| | ||||||||||| ||  ||||||| ||||||||| ||||||| |||||||| ||| || || |||||||||||||||||||     
T  17647352 aaaggttgttaaaatcgggattttgcttcaggtcgaaagagatgagcaaaatcgacaatcataaaatcgcaatcaaaatcgaaggattttactcaactag 17647253  T
Q  202 ttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggatttta 256  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| |||||||||    
T  17647252 ttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggatttta 17647197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 325 - 456
Target Start/End: Complemental strand, 15294803 - 15294672
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||| ||||||||||| ||||||  |||| ||||     
T  15294803 gaaattgtaaaatcgcaatcaaaatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctga 15294704  T
Q  425 attttagaatttaagttgggattttgacaaca 456  Q
    ||||||| |||||||| |||||||| ||||||    
T  15294703 attttaggatttaagtcgggatttttacaaca 15294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 325 - 456
Target Start/End: Complemental strand, 15475172 - 15475041
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||| ||||||||||| ||||||  |||| ||||     
T  15475172 gaaattgtaaaatcgcaatcaaaatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctga 15475073  T
Q  425 attttagaatttaagttgggattttgacaaca 456  Q
    ||||||| |||||||| |||||||| ||||||    
T  15475072 attttaggatttaagtcgggatttttacaaca 15475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 327 - 458
Target Start/End: Complemental strand, 45403160 - 45403029
Alignment:
Q  327 aatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggat 426  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||| |||| |||||||| |||||||||  |||| | |||||    
T  45403160 aatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgagattcttctatggatttaagtcgttgaaggtcaagaaagtcgcaaaatcttggat 45403061  T
Q  427 tttagaatttaagttgggattttgacaacaat 458  Q
    |||||||||||||| | |||||||||||||||    
T  45403060 tttagaatttaagtcgcgattttgacaacaat 45403029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 326 - 454
Target Start/End: Original strand, 3094250 - 3094378
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgga 425  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||   |||| |||| |    
T  3094250 aaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaa 3094349  T
Q  426 ttttagaatttaagttgggattttgacaa 454  Q
    |||||  |||||||| |  ||||||||||    
T  3094350 ttttaagatttaagtcgaaattttgacaa 3094378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 103 - 258
Target Start/End: Original strand, 29384087 - 29384243
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | ||||||||||| ||  ||||| ||||| ||||| |||||||||||||||| ||  || || |||||||||||||||||||||    
T  29384087 aaggttgtcaaaatcgggattttgcttcaggtcgaaagaaaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttactcaactact 29384186  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| ||  ||||||||||  ||||||||||||||||||||| |||||||||||    
T  29384187 tttgtagaattaatataagaaatcgtaaaatcgcaatcaaaatcgatggattttacc 29384243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 121 - 243
Target Start/End: Complemental strand, 15231957 - 15231835
Alignment:
Q  121 attttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataa 220  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||||||| || ||| || | | |||||||||||||||||||||||| ||||||||||    
T  15231957 attttgcttcaagtcgaaagagaagagcaaaatcgacaatcgtaaaatcgcaactaaaatcgtacgattttactcaactacttttgtagaatcgatataa 15231858  T
Q  221 gaaactgtaaaatcgcaatcaaa 243  Q
     ||| ||||||||||||||||||    
T  15231857 aaaattgtaaaatcgcaatcaaa 15231835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 6811173 - 6811018
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| ||| |||| ||||| |  ||||||||||||||||| |||||||||||||||| ||  || || |||| |||||| |||||||||    
T  6811173 aaggttgtcaaaatcggaactttgtttcaaatcgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaagaattttaatcaactact 6811074  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| || ||||||||||| || ||||||||||||||||||| |||||||||||    
T  6811073 tttgtagaatagatataagaaattg-aaaatcgcaatcaaaatcgatggattttacc 6811018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 11879733 - 11879599
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||||| |||||  ||||||| |||||||||||| |||||||||| ||||| |||||||||||   |||| ||||     
T  11879733 gaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctga 11879634  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| ||||||||  | |||||||||||||||    
T  11879633 attttaggatttaagtcagaattttgacaacaatg 11879599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 11897149 - 11897015
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||||| |||||  ||||||| |||||||||||| |||||||||| ||||| |||||||||||   |||| ||||     
T  11897149 gaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaagaaagttgcaaaatcctga 11897050  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| ||||||||  | |||||||||||||||    
T  11897049 attttaggatttaagtcagaattttgacaacaatg 11897015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 17647126 - 17646993
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||| ||||  ||||||||||||||| |||||  ||||||||||||||||||||| ||||||||| ||||||||||||||||||  |||| ||||     
T  17647126 gaaatcgttaaataacaatcaaaatcgatgaatttttcctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 17647027  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||  |||||||| || ||||||||||||||    
T  17647026 attttatgatttaagtcggaattttgacaacaat 17646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 17566452 - 17566313
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||| | |||||||| ||||||||||| || ||||| |||||||||||| || ||||||||||| | ||| || || |||| ||||||||||||||||    
T  17566452 aaggtttttaaaatcaggattttgcttcaggtcaaaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactact 17566353  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaa 242  Q
    ||||||| |  ||||||||||| |||||||||||||||||    
T  17566352 tttgtagaacagatataagaaattgtaaaatcgcaatcaa 17566313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 22910198 - 22910332
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||  ||||||||||| |||||||||| ||||| |||||||||||| ||||| |||      
T  22910198 gaaatcttaaaatcgcaatcaaaatcaatggattttgcctattttaagattctactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaa 22910297  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||||| ||||| || ||| |||||    
T  22910298 attttaggatttaagtcgggatgtttacatcaatg 22910332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 103 - 243
Target Start/End: Original strand, 22909979 - 22910118
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| || |||| | ||| ||  ||||||||||| ||||| |||||||||||||||| ||   | |||||||||||||| ||||||| |    
T  22909979 aaggttgtcaaaatcgga-ttttacatcatgtcgaaagagaagagaaaaatcgacaatcgtaaaatcgcaaccgaaattgaaggattttattcaactatt 22910077  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaa 243  Q
    ||||||| ||||||||||||||  |||||||||||||||||    
T  22910078 tttgtagaatcgatataagaaatcgtaaaatcgcaatcaaa 22910118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 325 - 409
Target Start/End: Complemental strand, 23142308 - 23142224
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaa 409  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| |||| |||||| ||||||||    
T  23142308 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttaggattctactatggatttcagtcgttgaagttgaagaaa 23142224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 325 - 457
Target Start/End: Original strand, 29384313 - 29384444
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||| ||||| ||||||||||||||||| ||||||||||||||||||  |||| |   |    
T  29384313 gaaatcgtaaaatcgcaatcaaa-tcgatgaattttgcctatttttggattatactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatctaag 29384411  T
Q  425 attttagaatttaagttgggattttgacaacaa 457  Q
    ||||||| ||||||    |||||||||||||||    
T  29384412 attttaggatttaaacctggattttgacaacaa 29384444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 103 - 258
Target Start/End: Original strand, 15761133 - 15761289
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||| |||||  | |||||||||||||   |||| |||||   |||| || ||||||||||||| |||  | || |||||||||||||||| ||||    
T  15761133 aaggttgttaaaattgggattttgcttcaagccgaaagggaagaatgaaattgagaatcgtaaaatcgcaatataaatcgaaggattttactcaattact 15761232  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| |||||||||||||   ||||||||||||||||||||| |||||||||||    
T  15761233 tttgtagaatcgatataagaagtagtaaaatcgcaatcaaaatcgatggattttacc 15761289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 325 - 412
Target Start/End: Complemental strand, 6810954 - 6810868
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtc 412  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||   ||||||||||||||||||||| ||||||||||||||||||    
T  6810954 gaaatcgtaaaatcgtaatcaaaatcgatg-attttgcctattttaaaattctactatggatttgagtcgttgaaggtgaagaaagtc 6810868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 102 - 247
Target Start/End: Complemental strand, 23142529 - 23142384
Alignment:
Q  102 aaaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactac 201  Q
    |||||||||||||||||| | |||  ||||| |  |||| ||| |||||||  |  ||||||||||||| |||| | || ||| ||||||| ||||  ||    
T  23142529 aaaggttgtcaaaatcaggactttatttcaattcgaaagggaatagcaaaaccggtaatcgtaaaatcgcaatttaaatcgaatgattttagtcaaaaac 23142430  T
Q  202 ttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||    
T  23142429 ttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcg 23142384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 383 - 459
Target Start/End: Original strand, 477101 - 477177
Alignment:
Q  383 ggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaatg 459  Q
    |||||| |||||||||||||||||||||||| |||| |||||||||||| ||||||||  |||||||||||||||||    
T  477101 ggatttaagtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaatg 477177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 326 - 439
Target Start/End: Complemental strand, 32424464 - 32424354
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgga 425  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||| |||||| || || |   |||| |||||||||||| |||  |    
T  32424464 aaatcgtaaaatcgcaatcaaaatctataaattttgtctattttaggattctactatgaatttgaatcgttaa---tgaaaaaagtcataaaatcctaaa 32424368  T
Q  426 ttttagaatttaag 439  Q
    ||||||||||||||    
T  32424367 ttttagaatttaag 32424354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 104 - 245
Target Start/End: Original strand, 3094020 - 3094159
Alignment:
Q  104 aggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactactt 203  Q
    |||||||||||||||  ||||| ||| | ||| |||||| |||||||||| |||||||||||||  | ||  || ||||||||||||||||||| |||||    
T  3094020 aggttgtcaaaatcaagattttactttaggtggaaagagtagagcaaaatcgacaatcgtaaaactgcaacaaaaattgaaggattttactcaattactt 3094119  T
Q  204 ttgtagcatcgatataagaaactgt-aaaatcgcaatcaaaat 245  Q
    ||||||     |||||||||| ||| |||||||||||||||||    
T  3094120 ttgtag---gcatataagaaattgtaaaaatcgcaatcaaaat 3094159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 103 - 247
Target Start/End: Original strand, 7489058 - 7489202
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||||| | ||| ||||||||  ||||  || ||||||||    | ||||||||||| ||| || || | ||||||||||||||  |||    
T  7489058 aaggttgtcaaaatcaggactttacttcaagtcgaaaggaaatagcaaaattaggactcgtaaaatcgcaatcaaaatcggaggattttactcaaggact 7489157  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||| |||||||||  ||| ||||||||||||||||||||||    
T  7489158 tttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcg 7489202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 356 - 460
Target Start/End: Original strand, 15761466 - 15761570
Alignment:
Q  356 attttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaac 455  Q
    |||||| ||||||||||||| | ||||| ||||||||| |||||||| || ||| ||| |||| |||||| ||||| |||||||| | ||||||||||||    
T  15761466 attttgcctattttgggattttgctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgacaac 15761565  T
Q  456 aatgg 460  Q
    |||||    
T  15761566 aatgg 15761570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 121 - 247
Target Start/End: Original strand, 24056363 - 24056489
Alignment:
Q  121 attttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataa 220  Q
    ||||||||||| ||  |||| |||||||||||| ||  ||| |||||| ||||| || || ||||||||||||||||||| |||||||| ||| ||||||    
T  24056363 attttgcttcaggtcgaaagggaagagcaaaattgaatatcataaaatggtaatcaaaatcgaaggattttactcaactagttttgtagaatcaatataa 24056462  T
Q  221 gaaactgtaaaatcgcaatcaaaatcg 247  Q
     |||   |||||||||||||| |||||    
T  24056463 caaatgttaaaatcgcaatcataatcg 24056489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 31424518 - 31424377
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||||||||||   ||||| ||||| ||  ||||||| ||||||||| |||||||||||||||| ||| || |    |||||||||||||||||||    
T  31424518 aaggttgtcaaaatcgagattttacttcaggtcgaaagagatgagcaaaatcgacaatcgtaaaatcgcaatcaaaac---aggattttactcaactact 31424422  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
     |||| | || |||||||||||  ||||||| |||||| ||||||    
T  31424421 cttgtggaattgatataagaaatagtaaaattgcaatccaaatcg 31424377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 11879954 - 11879798
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | ||||| ||||| || ||||| ||| || ||||| |  | ||||||||||| ||| || || ||||||||||||  ||  |||    
T  11879954 aaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaact 11879855  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||| ||| |||||||||  ||| |||||||||||| ||||||||| |||||||||||    
T  11879854 tttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttacc 11879798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 11897370 - 11897214
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | ||||| ||||| || ||||| ||| || ||||| |  | ||||||||||| ||| || || ||||||||||||  ||  |||    
T  11897370 aaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaact 11897271  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||| ||| |||||||||  ||| |||||||||||| ||||||||| |||||||||||    
T  11897270 tttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttacc 11897214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 355 - 459
Target Start/End: Original strand, 24056594 - 24056698
Alignment:
Q  355 gattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaa 454  Q
    |||||||||||||||||||||   ||||||||||||||| || || ||||| ||||||  |||| |||||||||||| ||||||||   |||||||| ||    
T  24056594 gattttgtctattttgggatttcgctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagtcaagattttgataa 24056693  T
Q  455 caatg 459  Q
    |||||    
T  24056694 caatg 24056698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 325 - 460
Target Start/End: Original strand, 27836460 - 27836595
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||| ||||||| | ||||||||| |||| ||||||  |||||| | |||||||||||||||| |||  ||||||||||| |||  |  |||| ||||     
T  27836460 gaaattgtaaaattgtaatcaaaattgatgaattttgcttattttagaattctactatggatttcagttgttgaaggtgaataaaaccgcaaaatcctga 27836559  T
Q  425 attttagaatttaagttgggattttgacaacaatgg 460  Q
    ||||||| || |||||| | ||||||||||||||||    
T  27836560 attttaggatctaagtttgaattttgacaacaatgg 27836595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 32424631 - 32424544
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||| |||||| || ||||||||||||||||  | |||||||| ||||| ||| |||| |||||||||||||| |||||||    
T  32424631 tcgtaaaatcgcaattaaaatcgaaggattttactcaaggagttttgtagaatcgagataggaaattgtaaaatcgcaataaaaatcg 32424544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 45403349 - 45403240
Alignment:
Q  137 aaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgc 236  Q
    |||| ||| |||||||| || | ||||||||||| ||| || || ||||||||||||| ||  |||||||||| ||||||||| |||| ||||||| |||    
T  45403349 aaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttacttaaagacttttgtagaatcgatataggaaattgtaaaa-cgc 45403251  T
Q  237 aatcaaaatcg 247  Q
    |||||||||||    
T  45403250 aatcaaaatcg 45403240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 243
Target Start/End: Original strand, 24414062 - 24414202
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||  ||| ||| ||||| ||  |||| ||| ||||||||  | | ||||||||||| ||| || || ||||||||||||||||  | |    
T  24414062 aaggttgtcaaaattggaactttacttcatgtcgaaagggaatagcaaaatttagactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaatt 24414161  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaa 243  Q
    ||||||| ||||||||| |||| |||||||||  |||||||    
T  24414162 tttgtagaatcgatataggaaattgtaaaatcctaatcaaa 24414202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 5922323 - 5922265
Alignment:
Q  182 gaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatc 240  Q
    ||||||||||||||||  |||||||||| ||||||||| |||| |||||||||||||||    
T  5922323 gaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaatcgcaatc 5922265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 186 - 247
Target Start/End: Complemental strand, 8582314 - 8582253
Alignment:
Q  186 gattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||||||||||||||||||||||| || |||||||||||  |||||||  ||||||||||||    
T  8582314 gattttactcaactacttttgtagaattgatataagaaatcgtaaaattacaatcaaaatcg 8582253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 7489279 - 7489368
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttg----ggattctactatggatttgagtcattgaaggtgaagaaag 410  Q
    |||||| |||||| |||||||||||||||  ||||||||||||||     | ||||||||| |||||| |||| ||||||||||||||||    
T  7489279 gaaatcataaaattgcaatcaaaatcgataaattttgtctattttatttagaattctactacggattttagtcgttgaaggtgaagaaag 7489368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 15294963 - 15294867
Alignment:
Q  163 taaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaat-cgtggattttacc 258  Q
    |||||||| ||| || || ||||||||||||||||  |||||||||| ||| ||||||||||   ||||||||||| |||||| | |||||||||||    
T  15294963 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatccatggattttacc 15294867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 15475332 - 15475236
Alignment:
Q  163 taaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaat-cgtggattttacc 258  Q
    |||||||| ||| || || ||||||||||||||||  |||||||||| ||| ||||||||||   ||||||||||| |||||| | |||||||||||    
T  15475332 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatccatggattttacc 15475236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 29384205 - 29384240
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||||||||||||||||||||||||||||||||||    
T  29384205 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 29384240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 325 - 369
Target Start/End: Original strand, 9212251 - 9212295
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctatttt 369  Q
    |||||| |||||||||||||||||||||||||||||  |||||||    
T  9212251 gaaatcttaaaatcgcaatcaaaatcgatggatttttcctatttt 9212295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 395 - 459
Target Start/End: Original strand, 17788372 - 17788436
Alignment:
Q  395 ttgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||||||  ||||||  |||| ||| ||||||| ||||||||||| ||||||||||||||||    
T  17788372 ttgaaggtgagtaaagtctcaaaatcctagattttaaaatttaagttgcgattttgacaacaatg 17788436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 17647233 - 17647198
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  17647233 gaaattgtaaaatcgcaatcaaaatcgatggatttt 17647198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 408
Target Start/End: Complemental strand, 15231856 - 15231774
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaa 408  Q
    |||| |||||||||||||||||   | ||||||||| |||||||  |||| || |||| |||| |||| ||||||||||||||    
T  15231856 aaattgtaaaatcgcaatcaaatatgttggattttgcctattttaagattttagtatgaatttcagtcgttgaaggtgaagaa 15231774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 258
Target Start/End: Original strand, 19704250 - 19704388
Alignment:
Q  121 attttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataa 220  Q
    ||||| ||||||||  |||| ||| |||||||| |  | ||||||||||| ||| || ||  ||||| |||||||||  ||| |||||| ||||||||      
T  19704250 attttacttcaagtccaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggaatttactcaaggactgttgtagaatcgatattt 19704349  T
Q  221 gaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||   ||||||| |||||||||||| |||||||||||    
T  19704350 gaaatcttaaaatcacaatcaaaatcgatggattttacc 19704388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 422 - 460
Target Start/End: Original strand, 27672308 - 27672346
Alignment:
Q  422 tggattttagaatttaagttgggattttgacaacaatgg 460  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  27672308 tggattttagaatttaagtcgggattttggcaacaatgg 27672346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 331 - 360
Target Start/End: Original strand, 15761257 - 15761286
Alignment:
Q  331 gtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||||||||||||||||||||||||||||    
T  15761257 gtaaaatcgcaatcaaaatcgatggatttt 15761286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 3e-48; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 27233273 - 27233407
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||| |||||    
T  27233273 gaaatcataaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctgg 27233372  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||||| || | |||||||||||||    
T  27233373 attttaggatttaagtcggtagtttgacaacaatg 27233407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 30912408 - 30912542
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||| ||||||||||||||||||  |||| |||      
T  30912408 gaaatcgtaaaatcgcaatcaaaatctatggattttgcctattttgtgattctattatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaa 30912507  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||||||||||||||||||||||||    
T  30912508 attttaggatttaagttgggattttgacaacaatg 30912542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 333 - 459
Target Start/End: Original strand, 6943464 - 6943590
Alignment:
Q  333 aaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttaga 432  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||  |||| |||| |||||||     
T  6943464 aaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagg 6943563  T
Q  433 atttaagttgggattttgacaacaatg 459  Q
    |||||||| ||||||||||||||||||    
T  6943564 atttaagtcgggattttgacaacaatg 6943590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 15528106 - 15528239
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||| |||| |||| || |||||||||||||||  |||| ||||     
T  15528106 gaaatcgtaaaatcgcaatcgaaatcgatggattttgtctattttaagattctactatgaatttaagtcgttaaaggtgaagaaagtcgcaaaatcctga 15528205  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||| |||||||| |||||||||||||||||    
T  15528206 attttaggatttaagtcgggattttgacaacaat 15528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 17250190 - 17250057
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||| ||| |||||| |||||||||||||||| ||||||||| |||| |||||||||||||||||   |||| |||||    
T  17250190 gaaatcgtaaaatcgcaatcaaaatcaatgaattttgcctattttgggattctagtatggatttaagtcgttgaaggtgaagaaagttgcaaaatcctgg 17250091  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||| |||||||| |||||||| ||||||||    
T  17250090 attttaggatttaagtcgggattttaacaacaat 17250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 26053292 - 26053425
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||  |||||||||| |||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||  |||| ||| |    
T  26053292 gaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctag 26053391  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||  |||||||| |||||||||||||||||    
T  26053392 attttaagatttaagtcgggattttgacaacaat 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 26073345 - 26073478
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||  |||||||||| |||||||||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||  |||| ||| |    
T  26073345 gaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaagaaagtcgcaaaatcctag 26073444  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||  |||||||| |||||||||||||||||    
T  26073445 attttaagatttaagtcgggattttgacaacaat 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 107 - 258
Target Start/End: Complemental strand, 23898160 - 23898009
Alignment:
Q  107 ttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttg 206  Q
    ||||||||||| | ||||||||||| ||  || |||||||||||||| |||||||||||||||| ||  || || |||||||||||||||||||| ||||    
T  23898160 ttgtcaaaatcgggattttgcttcaggtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttactcaactac-tttg 23898062  T
Q  207 tagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||| |||||||||||||| ||||||||| |||||||||||| |||||||||||    
T  23898061 tagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggattttacc 23898009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 325 - 460
Target Start/End: Complemental strand, 21354873 - 21354746
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||| |||| |||||||| ||||||||        || ||    
T  21354873 gaaatcgtaaaatcgcaataaaaaacgatggattttgtctattttgggattctaccatggatttaagtcgttgaaggtaaagaaagt--------ccagg 21354782  T
Q  425 attttagaatttaagttgggattttgacaacaatgg 460  Q
    ||||||| ||||||||||||||||||||||||||||    
T  21354781 attttaggatttaagttgggattttgacaacaatgg 21354746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 329 - 460
Target Start/End: Original strand, 10509023 - 10509154
Alignment:
Q  329 tcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattt 428  Q
    ||||||||||| |||||||||||||| |||||| ||||||||||||||||||||  ||||||||||||||| ||||||||||||| |||   ||| ||||    
T  10509023 tcgtaaaatcgtaatcaaaatcgatgaattttgcctattttgggattctactataaatttgagtcattgaatgtgaagaaagtcacaaatttctgaattt 10509122  T
Q  429 tagaatttaagttgggattttgacaacaatgg 460  Q
    ||| ||||||||  |||||||||||| |||||    
T  10509123 taggatttaagtctggattttgacaataatgg 10509154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 325 - 460
Target Start/End: Complemental strand, 19748466 - 19748331
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||  |||||||||| |||||||||||||| |||||||||||| ||  |||| |||||    
T  19748466 gaaatcgtaaaatcacaatcaaaatcgatgaattttgcctattttaagattctactacggatttgagtcattaaaggtgaagaaaatctcaaaatcctgg 19748367  T
Q  425 attttagaatttaagttgggattttgacaacaatgg 460  Q
    ||| ||  |||||||| |||||||||| ||||||||    
T  19748366 attgtaagatttaagtcgggattttgaaaacaatgg 19748331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 121 - 247
Target Start/End: Original strand, 2912054 - 2912180
Alignment:
Q  121 attttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataa 220  Q
    ||||||||||| ||  |||||||||||| |||| || |||||||||||| ||||  | ||||||||||||||||||||||||||||||| || | |||||    
T  2912054 attttgcttcaggttgaaagagaagagcgaaatcgataatcgtaaaatcataatcgaaattgaaggattttactcaactacttttgtagaattgttataa 2912153  T
Q  221 gaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||| ||||||||||||||||||||||    
T  2912154 gaaattgtaaaatcgcaatcaaaatcg 2912180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 11327567 - 11327701
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||| |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||| |||| |||||| ||||||||  |  |||| | |||    
T  11327567 gaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttgg 11327666  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    |||||||  ||||||| ||||||||||||||||||    
T  11327667 attttaggttttaagtcgggattttgacaacaatg 11327701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 23897944 - 23897810
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| | ||| ||||||||||||||||| ||||| ||||||||||||  |||| ||||     
T  23897944 gaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctgc 23897845  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||||| ||||| ||  ||||||||    
T  23897844 attttaggatttaagtcgggatcttatcaacaatg 23897810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 325 - 450
Target Start/End: Original strand, 22498881 - 22499006
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| || |||||||||||||||  ||||   |||    
T  22498881 gaaatcgtaaaattgcaattaaaatcgatggattttgtctattttgagattgtactatggatttgagtcgttcaaggtgaagaaagtcgcaaaattgtgg 22498980  T
Q  425 attttagaatttaagttgggattttg 450  Q
    | ||||| |||| |||||||||||||    
T  22498981 aatttaggattttagttgggattttg 22499006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 326 - 458
Target Start/End: Original strand, 7918378 - 7918510
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgga 425  Q
    |||||| |||||| |||||||||||||| |||||||  ||| || ||||| |||||||||||| |||| ||||||||||| ||||||  |||| |||| |    
T  7918378 aaatcgcaaaatcccaatcaaaatcgattgattttgcttatgttaggattttactatggatttaagtcgttgaaggtgaaaaaagtcgcaaaatcctgaa 7918477  T
Q  426 ttttagaatttaagttgggattttgacaacaat 458  Q
    ||||||||||||||| |||||||||||||||||    
T  7918478 ttttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 103 - 257
Target Start/End: Original strand, 30912181 - 30912336
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| ||||||||||||| ||  |||||||| |||||||| || ||||||||||||  ||  || |||||||||||||| |||||||||    
T  30912181 aaggttgtcaaaatcggaattttgcttcaggttgaaagagaatagcaaaatcgataatcgtaaaatctcaaccaaaattgaaggattttattcaactact 30912280  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttac 257  Q
    ||||||  ||||||||||||||   || ||||||||||| ||||| ||||||||||    
T  30912281 tttgtaaaatcgatataagaaatcatagaatcgcaatcataatcgatggattttac 30912336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 17543736 - 17543870
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||| |||||||||||||||||||| || |||||||  ||||||  |||||||||||||||||||||| ||||| ||||| ||||||  |||| ||||     
T  17543736 gaaatagtaaaatcgcaatcaaaatccatagattttgcttattttaagattctactatggatttgagtcgttgaaagtgaaaaaagtcgcaaaatcctga 17543835  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||||| | ||||||||||||||||    
T  17543836 attttaggatttaagtcgagattttgacaacaatg 17543870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 7223645 - 7223518
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| ||       ||||||||||||||  |||| |||      
T  7223645 gaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttggaattctactatggatttaag-------aggtgaagaaagtcgcaaaatcctaa 7223553  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||||| ||||||||||||||||||    
T  7223552 attttaggatttaagtcgggattttgacaacaatg 7223518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 17103328 - 17103201
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||       |||  |||| ||||     
T  17103328 gaaatcgtaaaatcgtaatcaaaatcgatggattttgtctattttgggattctactatgcatttgagtcgttgaaagt-------gtcgcaaaatcctga 17103236  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||  |||||||| ||||||||||||||||||    
T  17103235 attttaagatttaagtcgggattttgacaacaatg 17103201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 19748687 - 19748531
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | | |||  |||| ||  |||| ||| |||||||| |  | ||||||||||| ||| || || ||||||||||||||||  |||    
T  19748687 aaggttgtcaaaatcgggactttaattcaggttgaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 19748588  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  19748587 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 19748531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 103 - 258
Target Start/End: Original strand, 22498215 - 22498371
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||  | | ||| ||||| ||  |||| ||| |||||||| |  | ||||||||||| ||| || |||||| ||||||||||||  |||    
T  22498215 aaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaatcgcaatcaaaattgaacgattttactcaaagact 22498314  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  22498315 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 22498371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 103 - 258
Target Start/End: Original strand, 11327337 - 11327493
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| |   ||| ||||| ||  |||| ||| |||||||| || | ||||||||||| ||| || || |||| |||||||||||  |||    
T  11327337 aaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggact 11327436  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| ||||||||| |||| ||||||||||||| |||||||| |||||||||||    
T  11327437 tttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttacc 11327493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 17103549 - 17103393
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | | ||| ||||||||  |||| ||| | ||||||    | ||||||||||| ||| || |  ||||||||||||||||  |||    
T  17103549 aaggttgtcaaaatcgggactttacttcaagtcgaaagggaataacaaaatcaggactcgtaaaatcgcaatcaataccgaaggattttactcaaggact 17103450  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| ||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  17103449 tttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 17103393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 101 - 247
Target Start/End: Original strand, 3573672 - 3573819
Alignment:
Q  101 taaaggttgtcaaaatcagaattttgcttcaagt-gaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaact 199  Q
    ||||||||||||||||| | | ||| ||||| || |||||| ||| ||||||||    | ||||||||||| ||| || || | |||| |||||||||||    
T  3573672 taaaggttgtcaaaatcgggactttacttcaggtcgaaaagggaatagcaaaatcaggactcgtaaaatcgcaatcaaaatcgtaggaatttactcaact 3573771  T
Q  200 acttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||| |||||| || ||||||||||| ||||||||||||||||||||||    
T  3573772 actcttgtagaatagatataagaaattgtaaaatcgcaatcaaaatcg 3573819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 355 - 460
Target Start/End: Original strand, 18491063 - 18491168
Alignment:
Q  355 gattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaa 454  Q
    |||||||||  |||||||||||| ||||||||||||||| ||||||||||| ||||    ||||  ||||||||||| |||||||| ||||||||||||     
T  18491063 gattttgtcagttttgggattctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggattttgacag 18491162  T
Q  455 caatgg 460  Q
    ||||||    
T  18491163 caatgg 18491168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 7223869 - 7223713
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | | ||| ||||| ||  |||| ||| |||||||| |  | ||||||||| | ||| || || ||||||||||||||||  |||    
T  7223869 aaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggact 7223770  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatc-gtggattttacc 258  Q
    ||||||| ||||||||| |||| |||||||||||||||| ||||  |||||||||||    
T  7223769 tttgtagaatcgatataggaaattgtaaaatcgcaatcagaatcaatggattttacc 7223713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 163 - 258
Target Start/End: Original strand, 17543565 - 17543661
Alignment:
Q  163 taaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    |||||||| ||| || || ||||||||||||||||  |||||||||| ||||||||  |||| |||||||||||||||||||||| |||||||||||    
T  17543565 taaaatcgaaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttacc 17543661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 326 - 455
Target Start/End: Original strand, 2912245 - 2912373
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgga 425  Q
    |||||||||||| |||||||||||||||| ||||||  ||||||  ||||||||||| ||||||| || |||||| || |||||||   |||| |||  |    
T  2912245 aaatcgtaaaattgcaatcaaaatcgatgaattttgcttattttaagattctactat-gatttgaatcgttgaagatggagaaagttgcaaaatcctaaa 2912343  T
Q  426 ttttagaatttaagttgggattttgacaac 455  Q
    |||||  |||||||| ||||||||||||||    
T  2912344 ttttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 106 - 258
Target Start/End: Original strand, 26053074 - 26053227
Alignment:
Q  106 gttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactactttt 205  Q
    |||||||||||||| | ||| ||||| ||  ||||  || |||||||| |  | ||||||||||  ||| || || ||| ||||||||||||  ||||||    
T  26053074 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgactttt 26053173  T
Q  206 gtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    |||| ||||||||  |||| |||||||||||||||||||||| |||||||||||    
T  26053174 gtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttacc 26053227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 106 - 258
Target Start/End: Original strand, 26073127 - 26073280
Alignment:
Q  106 gttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactactttt 205  Q
    |||||||||||||| | ||| ||||| ||  ||||  || |||||||| |  | ||||||||||  ||| || || ||| ||||||||||||  ||||||    
T  26073127 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgactttt 26073226  T
Q  206 gtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    |||| ||||||||  |||| |||||||||||||||||||||| |||||||||||    
T  26073227 gtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttacc 26073280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 183 - 247
Target Start/End: Original strand, 4841684 - 4841748
Alignment:
Q  183 aaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||||||||||||||||||| ||||  ||||||||  |||||||||||||||||||||    
T  4841684 aaggattttactcaactacttttgtagaatcgggataagaaatcgtaaaatcgcaatcaaaatcg 4841748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 7918182 - 7918281
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||||| | ||| || || |||| |||||||||||  |||||||||| ||| ||||| |||| |||||||||||||||||||||| |||||||||||    
T  7918182 tcgtaaaattgcaatcaaaatcgaagaattttactcaaggacttttgtagaatcaatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 7918281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 15527946 - 15528029
Alignment:
Q  164 aaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||| ||| || || ||||||||||||||||  |||||||||| ||||||||| |||| ||||||||||||||| ||||||    
T  15527946 aaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcgaaatcg 15528029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 10508886 - 10508934
Alignment:
Q  197 actacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaat 245  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  10508886 actacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaat 10508934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 381 - 456
Target Start/End: Original strand, 3573984 - 3574059
Alignment:
Q  381 atggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaaca 456  Q
    ||||||||||||| ||||||||||||||||||   |||  |||||||||||||||||||| || ||||||| ||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaattttgaaaaca 3574059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 27890683 - 27890624
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatata 219  Q
    ||||||||||||||| || |||||||||||||||||||  |||||||||| |||||||||    
T  27890683 tcgtaaaatcgtaatcaaaattgaaggattttactcaaggacttttgtagaatcgatata 27890624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 379 - 460
Target Start/End: Original strand, 5422798 - 5422879
Alignment:
Q  379 ctatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaatgg 460  Q
    |||| |||||||||| ||||||||||| |||||   |||| | || ||||||| |||||||| |||||||||||||||||||    
T  5422798 ctatagatttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaatgg 5422879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 20432411 - 20432484
Alignment:
Q  146 agcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatata 219  Q
    |||||||| || ||||||||||||| ||| || ||||||| |||||||| ||||| |||||||| |||||||||    
T  20432411 agcaaaatcgaaaatcgtaaaatcgcaatcaaaattgaagaattttacttaactagttttgtagaatcgatata 20432484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 27233134 - 27233218
Alignment:
Q  163 taaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||||||| ||| || |||||||||||||||||||   |||| |||| |||| ||||  ||| ||||||||||||||||||||||    
T  27233134 taaaatcgcaatcaaaattgaaggattttactcaaggtctttagtagaatcgctatagaaaattgtaaaatcgcaatcaaaatcg 27233218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 432
Target Start/End: Original strand, 18490998 - 18491064
Alignment:
Q  366 ttttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttaga 432  Q
    |||| ||||||| ||||||||||||||||||||||||||| |||||   ||||  ||||||||||||    
T  18490998 ttttaggattctgctatggatttgagtcattgaaggtgaataaagttgcaaaatgctggattttaga 18491064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 356 - 412
Target Start/End: Original strand, 4841946 - 4842002
Alignment:
Q  356 attttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtc 412  Q
    |||||| ||||| ||||||||| ||| ||||||||||| ||||||||||| ||||||    
T  4841946 attttgcctattatgggattctgctacggatttgagtcgttgaaggtgaataaagtc 4842002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 4841722 - 4841757
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    |||||||||||||||||||||||||||||| |||||    
T  4841722 gaaatcgtaaaatcgcaatcaaaatcgatgtatttt 4841757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 7918243 - 7918278
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  7918243 gaaattgtaaaatcgcaatcaaaatcgatggatttt 7918278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 17103431 - 17103396
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  17103431 gaaattgtaaaatcgcaatcaaaatcgatggatttt 17103396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 17543623 - 17543658
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  17543623 gaaattgtaaaatcgcaatcaaaatcgatggatttt 17543658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 19748569 - 19748534
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  19748569 gaaattgtaaaatcgcaatcaaaatcgatggatttt 19748534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 22498333 - 22498368
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  22498333 gaaattgtaaaatcgcaatcaaaatcgatggatttt 22498368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 26053189 - 26053224
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  26053189 gaaattgtaaaatcgcaatcaaaatcgatggatttt 26053224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 26073242 - 26073277
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  26073242 gaaattgtaaaatcgcaatcaaaatcgatggatttt 26073277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 359
Target Start/End: Complemental strand, 21354972 - 21354942
Alignment:
Q  329 tcgtaaaatcgcaatcaaaatcgatggattt 359  Q
    |||||||||||||||||||||||||||||||    
T  21354972 tcgtaaaatcgcaatcaaaatcgatggattt 21354942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 23506162 - 23506092
Alignment:
Q  137 aaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgt 207  Q
    |||||||| |||||||| || ||| ||||||||  |||||| || ||||||||||| ||||||| ||||||    
T  23506162 aaagagaatagcaaaatcgaaaattgtaaaatcacaattaaaatcgaaggattttagtcaactatttttgt 23506092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 366 - 455
Target Start/End: Original strand, 33583766 - 33583855
Alignment:
Q  366 ttttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaac 455  Q
    ||||||| |||| ||||||||||||||| |||||| | |  ||||||  |||| |||||||||| | | |||||| | ||||||||||||    
T  33583766 ttttgggtttctgctatggatttgagtcgttgaagctaattaaagtctaaaaatcctggattttgggacttaagtcgcgattttgacaac 33583855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 2e-46; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 325 - 460
Target Start/End: Complemental strand, 13100324 - 13100189
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||| ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||||| ||||| ||| |    
T  13100324 gaaattgtaaaatcgcaatcaaaatcgatggtttttgcctattttaggattctactatggatttgagtcgttgaacgtgaagaaagtcgtaaaatcctcg 13100225  T
Q  425 attttagaatttaagttgggattttgacaacaatgg 460  Q
    |||||||||||||||||||||||||||||| |||||    
T  13100224 attttagaatttaagttgggattttgacaataatgg 13100189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 325 - 460
Target Start/End: Original strand, 9352059 - 9352194
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||||||||| ||||||||||||||||||  |||| |||||    
T  9352059 gaaatcataaaatcgcaatcaaaatcgacggattttgtctattttgggactctgctatagatttgagtctttgaaggtgaagaaagtcgcaaaaccctgg 9352158  T
Q  425 attttagaatttaagttgggattttgacaacaatgg 460  Q
    ||||||| |||||||| |||||||||||||||||||    
T  9352159 attttaggatttaagtcgggattttgacaacaatgg 9352194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 332 - 459
Target Start/End: Original strand, 21846271 - 21846398
Alignment:
Q  332 taaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttag 431  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||  |||| ||||||||||||    
T  21846271 taaaatcgcaatcaaaatcgatggattttttctattttgagattctactatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttag 21846370  T
Q  432 aatttaagttgggattttgacaacaatg 459  Q
     |||||| | ||||||||||||||||||    
T  21846371 gatttaactcgggattttgacaacaatg 21846398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 9955031 - 9955165
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||  ||||||| |||| ||||||||||||||||||  |||| |||      
T  9955031 gaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgggattctacattggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctaa 9955130  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||||||||||||||||||||||||    
T  9955131 attttaggatttaagttgggattttgacaacaatg 9955165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 23528789 - 23528656
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||||| ||||||||||||||||||||||| |||||| |||||||||||  |||| ||||     
T  23528789 gaaatcgtaaaatcgcattcaaaatcgatagattttgcctattttaggattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctga 23528690  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||  ||||||||||||||||||||||||||    
T  23528689 attttaagatttaagttgggattttgacaacaat 23528656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 18304807 - 18304941
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtc-attgaaggtgaagaaagtcataaaaacctg 423  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||||||  ||||  |||    
T  18304807 gaaatcgtaaa-tcgcaatcaaaattgatggattttgtctattttgagattctactatgaatttgagtcgtttgaaggtgaagaaagtcgcaaaatactg 18304905  T
Q  424 gattttagaatttaagttgggattttgacaacaatg 459  Q
    |||||||| |||||||||||||||||||||||||||    
T  18304906 gattttaggatttaagttgggattttgacaacaatg 18304941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 9327211 - 9327345
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||| ||||||||  |||| |||      
T  9327211 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccctaa 9327310  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| ||||||||  ||||||| |||||||||    
T  9327311 attttaggatttaagtcaggattttaacaacaatg 9327345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 325 - 457
Target Start/End: Original strand, 42180061 - 42180193
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||| |||| ||||||||||||||| |||||| ||||||||  |||||||||||||||||| || ||||||| ||||||||||  |||| ||||     
T  42180061 gaaatcgtagaatcacaatcaaaatcgatgtattttgcctattttgaaattctactatggatttgactcgttgaaggggaagaaagtcgcaaaatcctga 42180160  T
Q  425 attttagaatttaagttgggattttgacaacaa 457  Q
    |||||||||||||||||||||||||||||||||    
T  42180161 attttagaatttaagttgggattttgacaacaa 42180193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 13276262 - 13276395
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||  ||| |||||| |||||||||||  |||| ||| |    
T  13276262 gaaatcgtaaaatcgcaatcaaaatcgattgattttgcctattttaggattctactatggatttaggtcgttgaagatgaagaaagtcgcaaaatcctag 13276361  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||| |||||| | |||||||||||||||||    
T  13276362 attttaggatttaaatcgggattttgacaacaat 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 325 - 456
Target Start/End: Complemental strand, 12513414 - 12513283
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||||||||||||  ||||||  |||| ||||||||||||||||| |||||| |||||||||||  |||| ||| |    
T  12513414 gaaatcgtaaaatcgcaatcaaaatcgatggattttgattattttatgattttactatggatttgagtcgttgaagctgaagaaagtcgcaaaatcctag 12513315  T
Q  425 attttagaatttaagttgggattttgacaaca 456  Q
    ||| ||| |||||||| |||||||||||||||    
T  12513314 attgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 325 - 456
Target Start/End: Original strand, 19009942 - 19010073
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||||||||||||  |||||| | ||| |||||||||||| |||||||||||||||| ||||||  |||| ||||     
T  19009942 gaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttagaattttactatggatttaagtcattgaaggtgaaaaaagtcgcaaaatcctga 19010041  T
Q  425 attttagaatttaagttgggattttgacaaca 456  Q
    ||||||| ||||||||  ||||||||||||||    
T  19010042 attttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 105 - 246
Target Start/End: Complemental strand, 32881672 - 32881531
Alignment:
Q  105 ggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttt 204  Q
    |||| |||||||| | |||||||||||  |  |||||||| |||||||| |||||||||||||||| || | | || |||||||||||||||||||| ||    
T  32881672 ggttttcaaaatcgggattttgcttcagattgaaagagaaaagcaaaatcgacaatcgtaaaatcgcaactgaaatcgaaggattttactcaactacgtt 32881573  T
Q  205 tgtagcatcgatataagaaactgtaaaatcgcaatcaaaatc 246  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  32881572 tgtagaatcgatataagaaattgtaaaatcgcaatcaaaatc 32881531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 103 - 255
Target Start/End: Original strand, 41032548 - 41032701
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||  | ||||| ||||| ||  ||||||||||||||||| || ||||||||||||| || ||| || |||| |||||||||||||| |    
T  41032548 aaggttgtcaaaatagggattttacttcaggttgaaagagaagagcaaaattgataatcgtaaaatcgcaactaaaatcgaagaattttactcaactagt 41032647  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggatttt 255  Q
    ||||||| |||||||||||||| |||||||||||||| ||||||| ||||||||    
T  41032648 tttgtagaatcgatataagaaattgtaaaatcgcaattaaaatcgatggatttt 41032701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 25146765 - 25146898
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||| ||||||| ||||| |||| | |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||  ||||  |||     
T  25146765 gaaatcgtaaa-tcgcaattaaaattgatgtactttgtctattttgggattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaattctga 25146863  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| ||||||||  |||||||||||||||||    
T  25146864 attttaggatttaagtcaggattttgacaacaatg 25146898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 41032666 - 41032800
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||||| ||||||||||||||| ||  |||| ||||     
T  41032666 gaaattgtaaaatcgcaattaaaatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctga 41032765  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||| ||  |||||||| | ||||||||||||||||    
T  41032766 attctacgatttaagtcgagattttgacaacaatg 41032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 103 - 243
Target Start/End: Complemental strand, 30619294 - 30619156
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | ||||| ||||| ||  ||||||||||||||||| |||||||||||| ||| ||  || || |||||||||||||||||||||    
T  30619294 aaggttgtcaaaatcgggatttt-cttcaggtcgaaagagaagagcaaaatcgacaatcgtaaa-tcgcaacaaaaatcgaaggattttactcaactact 30619197  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaa 243  Q
    ||||||| |||||||| | ||| ||||||||||||||||||    
T  30619196 tttgtagaatcgatatgaaaaattgtaaaatcgcaatcaaa 30619156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 12513625 - 12513488
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||  | ||||||||||| || |||||||||||||||||| |||||| ||||||||| ||  || ||  ||||||||||||||||||||    
T  12513625 aaggttgtcaaaattgggattttgcttcaggtcaaaagagaagagcaaaatcgacaattgtaaaatcgcaaccaaaatcaaaggattttactcaactact 12513526  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    | |||||       |||||||| ||||||||||||||||||||||    
T  12513525 tctgtag-------ataagaaattgtaaaatcgcaatcaaaatcg 12513488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 17055995 - 17056129
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||||||||||||||||||||   ||||||   |||||||||||||| |||||| ||||||||| ||||| |   |||| |||||    
T  17055995 gaaatcgtaaaatcgcaatcaaaatcgatggattttacttattttaaaattctactatggatctgagtcgttgaaggtggagaaaattgcaaaatcctgg 17056094  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||| |  |||||||||| ||||||    
T  17056095 attttaggatttaaatcaggattttgactacaatg 17056129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 17055751 - 17055850
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||||||| ||| || || |||||||||||||||||||||||||||| ||||||| |||||| |||||||| ||||||||||| | |||||||||||    
T  17055751 tcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcgatacaagaaattgtaaaattgcaatcaaaatggatggattttacc 17055850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 23528953 - 23528854
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||||||| ||| || || ||||||||||||||||  |||||||||| ||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  23528953 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 23528854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 326 - 451
Target Start/End: Original strand, 16125452 - 16125580
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtg---aagaaagtcataaaaacct 422  Q
    ||||||||||||||||||||||||| |||||||||| |||||||  |||| ||||||||||||  ||| |||||||||   |||||||||  |||| |||    
T  16125452 aaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttaagattttactatggatttaggtcgttgaaggtgaaaaagaaagtcgcaaaatcct 16125551  T
Q  423 ggattttagaatttaagttgggattttga 451  Q
    | ||||||| ||||||||  |||||||||    
T  16125552 gaattttaggatttaagtcaggattttga 16125580  T

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Target: chr1; HSP #22
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 137 - 258
Target Start/End: Complemental strand, 47786178 - 47786056
Alignment:
Q  137 aaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgc 236  Q
    ||||||||||||||||| |||||||||||||||  ||  || || |||||||||||||||||||||||||||| || |||||||||||    |||||||     
T  47786178 aaagagaagagcaaaatcgacaatcgtaaaatcacaaccaaaatcgaaggattttactcaactacttttgtagaattgatataagaaatcacaaaatcga 47786079  T
Q  237 aatcaaaatcg-tggattttacc 258  Q
    ||| ||||||| |||||||||||    
T  47786078 aataaaaatcgatggattttacc 47786056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 9128836 - 9128969
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||  |||||||||||  ||||||||| || || ||||||||||||  || | |||      
T  9128836 gaaatcgtcaaatcgcaatcaaaatcgatgaattttgtctattttaagattctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaa 9128935  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
     |||||| |||||||| | |||||| ||||||||    
T  9128936 tttttaggatttaagtcgtgattttaacaacaat 9128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 104 - 245
Target Start/End: Original strand, 21846050 - 21846191
Alignment:
Q  104 aggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactactt 203  Q
    |||||||||||||||| | ||| || || ||  |||| ||| |||||||| |  | || |||||||| ||| || || ||||||||||||||||  ||||    
T  21846050 aggttgtcaaaatcaggactttactccaggtcgaaagggaatagcaaaatcgggactcttaaaatcgcaatcaaaatcgaaggattttactcaaggactt 21846149  T
Q  204 ttgtagcatcgatataagaaactgtaaaatcgcaatcaaaat 245  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  21846150 ttgtagaatcgatataagaaattgtaaaatcgcaatcaaaat 21846191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 16125287 - 16125374
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||| ||| || || ||||||||||||||||  || ||||||| |||||||||||||| ||||||||||||||||||||||    
T  16125287 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcg 16125374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 354 - 459
Target Start/End: Original strand, 18337547 - 18337651
Alignment:
Q  354 ggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgaca 453  Q
    |||||||| |||||||||| |||| ||||||||||||||| ||||||||||| |||||   |||| ||||||||||||  | ||||| ||||||||||||    
T  18337547 ggattttgcctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggattttag-gtataagtcgggattttgaca 18337645  T
Q  454 acaatg 459  Q
    ||||||    
T  18337646 acaatg 18337651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 13100544 - 13100388
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | | ||| ||||||||  |||| |||  ||||||| |  | ||||||||||| ||| || ||  |||||||||||||||  ||     
T  13100544 aaggttgtcaaaatcgggactttacttcaagtcgaaagggaatggcaaaatcggaactcgtaaaatcgcaatcaaaatcaaaggattttactcaaggaca 13100445  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| ||||||||||||||   |||||||||||||||||||| |||||||||||    
T  13100444 tttgtagaatcgatataagaaatcttaaaatcgcaatcaaaatcgatggattttacc 13100388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 371 - 458
Target Start/End: Original strand, 12800623 - 12800710
Alignment:
Q  371 ggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaat 458  Q
    ||||| |||||| |||||||||| ||||| |||||||||||| ||||| |||  ||||||| ||||||||||||||||| ||||||||    
T  12800623 ggattttactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaacaat 12800710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 103 - 242
Target Start/End: Original strand, 14074258 - 14074397
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||||| | ||| ||||| ||  |||| ||| |||||||| |  | || |||||||  ||| || || ||||||||||||||||  |||    
T  14074258 aaggttgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaattggaactcataaaatcacaatcaaaatcgaaggattttactcaaggact 14074357  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaa 242  Q
    ||||||| ||||||||| |||| |||||||||||||||||    
T  14074358 tttgtagaatcgatataggaaattgtaaaatcgcaatcaa 14074397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 325 - 412
Target Start/End: Original strand, 17869746 - 17869833
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtc 412  Q
    ||||||||||||| |||||||||||||| | |||||| ||||||| |||||||||| |||||||  ||| | ||||||||||||||||    
T  17869746 gaaatcgtaaaattgcaatcaaaatcgaagaattttgcctattttaggattctactgtggatttaggtcgtcgaaggtgaagaaagtc 17869833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 158 - 256
Target Start/End: Original strand, 18304641 - 18304740
Alignment:
Q  158 aatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggatttta 256  Q
    ||||||||||||| | | || || ||||||||||||| ||  |||||||||| ||||||||| |||| |||||||||||||||||||||| |||||||||    
T  18304641 aatcgtaaaatcgcattcaaaatcgaaggattttactaaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggatttta 18304740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 30619150 - 30619075
Alignment:
Q  383 ggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaat 458  Q
    ||||||||||| ||||||||||||||| ||  |||| |||||||||||| |||||||| |||||||||||||||||    
T  30619150 ggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 103 - 258
Target Start/End: Original strand, 25146543 - 25146700
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||||| | ||| ||||| ||  |||| ||| |||||||| |  ||||||||||||| ||| || || ||||||||||||||||   ||    
T  25146543 aaggttgtcaaaatcaggactttacttcaggttgaaagggaatagcaaaatcggaaatcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtct 25146642  T
Q  203 tttgtagcatcgatataagaaactgt-aaaatcgcaatcaaaatcg-tggattttacc 258  Q
    || |||| |||||||||  ||| | | ||||||||||||||||||| |||||||||||    
T  25146643 ttcgtagaatcgatatagaaaattctaaaaatcgcaatcaaaatcgatggattttacc 25146700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 21242857 - 21242921
Alignment:
Q  158 aatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataaga 222  Q
    |||||||||||||||||||  ||||||| |||||||||||||| |||||||| ||||||||||||    
T  21242857 aatcgtaaaatcgtaattacaattgaagaattttactcaactaattttgtagaatcgatataaga 21242921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 247
Target Start/End: Complemental strand, 16434859 - 16434721
Alignment:
Q  107 ttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttg 206  Q
    ||||||||||||| ||||| ||  | || ||||| ||| |||||||| || ||||||||||| | ||| || || |||||||||||||| || |||||||    
T  16434859 ttgtcaaaatcaggatttttctctaggtcaaaagggaatagcaaaatcgaaaatcgtaaaattgcaatcaaaatcgaaggattttactcgacaacttttg 16434760  T
Q  207 tagcatcgatataaga-aactgtaaaatcgcaatcaaaatcg 247  Q
    ||| || ||||||||| |||   |||||||||||||||||||    
T  16434759 tagaattgatataagataac---aaaatcgcaatcaaaatcg 16434721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 19009780 - 19009879
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatc-gtggattttacc 258  Q
    ||||||||||| ||| || ||  |||||||||||||||  |||||||||  ||||||||| |||| |||||||||||||||||||||  |||||||||||    
T  19009780 tcgtaaaatcgcaatcaaaatcaaaggattttactcaagaacttttgtaaaatcgatataggaaattgtaaaatcgcaatcaaaatcattggattttacc 19009879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 354 - 461
Target Start/End: Complemental strand, 24117111 - 24117004
Alignment:
Q  354 ggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgaca 453  Q
    ||||||||| | ||||||||||||| |||  |||||| || ||||||||||| |||||  ||||| | |  |||||||||||||| |||| |||||||||    
T  24117111 ggattttgtttgttttgggattctaatataaatttgaatcgttgaaggtgaataaagttgtaaaatcttaaattttagaatttaaattggaattttgaca 24117012  T
Q  454 acaatgga 461  Q
    ||||||||    
T  24117011 acaatgga 24117004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 363 - 458
Target Start/End: Original strand, 14074404 - 14074499
Alignment:
Q  363 ctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaat 458  Q
    |||||||  ||||||||| |||||||||||| |||||  |||||||||||  |||| |||  ||||||| |||||||  |||||||||||||||||    
T  14074404 ctattttaagattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaacaat 14074499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 247
Target Start/End: Complemental strand, 18228533 - 18228474
Alignment:
Q  188 ttttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||||||||||| ||||||||| ||||||||||||||  |||||||||||||||| ||||    
T  18228533 ttttactcaacttcttttgtagaatcgatataagaaatcgtaaaatcgcaatcaacatcg 18228474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 247
Target Start/End: Original strand, 9351838 - 9351982
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||||  | ||| ||||| ||  |||| ||| |||||||| |  | ||||||||||| ||| || || | |||||||||  |||  |||    
T  9351838 aaggttgtcaaaatcaagactttacttcaggtcgaaagcgaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgtaggattttatccaaggact 9351937  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||| ||| ||||| |||| ||||||||| ||||||||||||    
T  9351938 tttgtagaatctatataggaaattgtaaaatcacaatcaaaatcg 9351982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 325 - 381
Target Start/End: Complemental strand, 18228333 - 18228278
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctacta 381  Q
    |||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||    
T  18228333 gaaatcataaaatc-caatcaaaattgatggattttgcctattttgggattctacta 18228278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 325 - 369
Target Start/End: Complemental strand, 32881460 - 32881416
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctatttt 369  Q
    |||||||||||||||||||||||||||||| |||||| |||||||    
T  32881460 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttt 32881416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 17869558 - 17869669
Alignment:
Q  136 aaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcg 235  Q
    ||||| |||||||||||| |  |  |||||||||| ||| || ||  |||||||||||||||  |||||| ||| ||| || ||| ||| ||||||||||    
T  17869558 aaaagggaagagcaaaatcgggacacgtaaaatcgcaatcaaaatcaaaggattttactcaaggacttttatagaatcaatgtaaaaaattgtaaaatcg 17869657  T
Q  236 caatcaaaatcg 247  Q
    ||||||||||||    
T  17869658 caatcaaaatcg 17869669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 247
Target Start/End: Original strand, 27917232 - 27917291
Alignment:
Q  188 ttttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||||||||||||||||||||  || ||||||||||| ||||  ||||||||||||||||    
T  27917232 ttttactcaactacttttgtataattgatataagaaattgtattatcgcaatcaaaatcg 27917291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 39845064 - 39845135
Alignment:
Q  137 aaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgta 208  Q
    |||||||| |||||||| || ||| ||||||| | |||||| |||||| ||||||||||||||| |||||||    
T  39845064 aaagagaatagcaaaatcgaaaattgtaaaattgcaattaaaattgaatgattttactcaactatttttgta 39845135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 366 - 460
Target Start/End: Original strand, 27502239 - 27502333
Alignment:
Q  366 ttttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaatgg 460  Q
    |||||||||||| ||||||||||||||| |||||| | || ||||| | ||||| ||||||||| ||| |||||  | ||||||| |||| ||||    
T  27502239 ttttgggattctgctatggatttgagtcgttgaagttaaacaaagttacaaaaatctggattttggaacttaagccgcgattttggcaaccatgg 27502333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 13276140 - 13276185
Alignment:
Q  202 ttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||    
T  13276140 ttttgtagaatcgatataagaaattgtaaaattgcaatcaaaatcg 13276185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 9128692 - 9128755
Alignment:
Q  182 gaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaat 245  Q
    ||||||||||||| ||  | |||||||| |||||||||  ||| ||||||||||||||||||||    
T  9128692 gaaggattttactaaaggatttttgtaggatcgatatagaaaattgtaaaatcgcaatcaaaat 9128755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 854 - 913
Target Start/End: Complemental strand, 9687577 - 9687519
Alignment:
Q  854 ttataaatatgaagagttaatttgaattttctttaccacaactactttagtctattgggt 913  Q
    ||||||||||||||||||| ||| ||||||||||||||||||  || |||||| ||||||    
T  9687577 ttataaatatgaagagttagttt-aattttctttaccacaacagctctagtcttttgggt 9687519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 13100426 - 13100391
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    |||||| |||||||||||||||||||||||||||||    
T  13100426 gaaatcttaaaatcgcaatcaaaatcgatggatttt 13100391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 18304704 - 18304739
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  18304704 gaaattgtaaaatcgcaatcaaaatcgatggatttt 18304739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 23528892 - 23528857
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  23528892 gaaattgtaaaatcgcaatcaaaatcgatggatttt 23528857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 25146596 - 25146631
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    |||||||||||||||||||||||||||| |||||||    
T  25146596 gaaatcgtaaaatcgcaatcaaaatcgaaggatttt 25146631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 9954865 - 9954963
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttac 257  Q
    ||||||||||| ||| || || ||||||||||||  ||  ||||||  || ||| ||||| |||| ||||||||||||||||| |||| ||||||||||    
T  9954865 tcgtaaaatcgcaatcaaaatcgaaggattttaccaaaggacttttcaagaatccatataggaaattgtaaaatcgcaatcaagatcgatggattttac 9954963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 42179846 - 42179952
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||||||| ||| ||||  || ||||| ||| |||| ||| || | ||||||||||| ||| || || ||||||||||| || |  |||    
T  42179846 aaggttgtcaaaatcagaaatttacttcgggttaaaagggaatagcataatcgaaactcgtaaaatcgcaatcaaaatcgaaggattttattcgaggact 42179945  T
Q  203 tttgtag 209  Q
    |||||||    
T  42179946 tttgtag 42179952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 354 - 455
Target Start/End: Original strand, 27917477 - 27917578
Alignment:
Q  354 ggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgaca 453  Q
    ||||||||  ||| ||| |||||| ||||| ||||| ||  |||||||| || ||| ||  |||| ||| ||||| ||||||||||| ||||||||||||    
T  27917477 ggattttgcttatcttgtgattctgctatgaatttgggttgttgaaggtaaataaaatcgcaaaatcctagatttcagaatttaagtcgggattttgaca 27917576  T
Q  454 ac 455  Q
    ||    
T  27917577 ac 27917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 2e-43; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 30432552 - 30432418
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||  |||| ||| |    
T  30432552 gaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgagattctactatggatttgagtcgttgaaggcgaagaaagtcgaaaaatcctag 30432453  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    |||||||||||||| |  |||||||||||||||||    
T  30432452 attttagaatttaaatcaggattttgacaacaatg 30432418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 1404916 - 1404782
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||| ||||||||||||||||||||||  || ||| ||||||||| |||||||| |||| ||||||||||||||||||| |||| |||      
T  1404916 gaaatcgtaaaatcacaatcaaaatcgatggattttgcatagtttaggattctacaatggatttaagtcgttgaaggtgaagaaagtcacaaaatcctaa 1404817  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    |||||||||||||||| ||||||||||||||||||    
T  1404816 attttagaatttaagtcgggattttgacaacaatg 1404782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 329 - 459
Target Start/End: Original strand, 23863321 - 23863451
Alignment:
Q  329 tcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattt 428  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||| |||| ||||| ||||||||||||  ||||  || |||||    
T  23863321 tcgtaaaatcgcaaccaaaatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattt 23863420  T
Q  429 tagaatttaagttgggattttgacaacaatg 459  Q
    |||||||||||| ||||||||||||||||||    
T  23863421 tagaatttaagtcgggattttgacaacaatg 23863451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 31237973 - 31238107
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||||||||||||||||||||  |||||||  |||||||||||| ||||||||| |||||||||||||||||   |||| ||| |    
T  31237973 gaaatcgtaaaatcgcaatcaaaatcgatggatttttcctattttaagattctactatgaatttgagtcgttgaaggtgaagaaagtggcaaaatcctag 31238072  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||||| ||||||||||||||||||    
T  31238073 attttaggatttaagtcgggattttgacaacaatg 31238107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 36429981 - 36429847
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| |||||| ||||| | ||||||| ||||||||||||||||||  |||| ||| |    
T  36429981 gaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttgagattctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctag 36429882  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||| ||| |||||||||||||||||||||||||||    
T  36429881 attataggatttaagttgggattttgacaacaatg 36429847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 325 - 457
Target Start/End: Original strand, 35565950 - 35566082
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||  |||||||||||  |||| ||||     
T  35565950 gaaatcgtaaaactgcaatcaaaatcgatggattttgcctattttgggattctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctga 35566049  T
Q  425 attttagaatttaagttgggattttgacaacaa 457  Q
    |||||   |||||||||||||||||||||||||    
T  35566050 attttgtgatttaagttgggattttgacaacaa 35566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 103 - 258
Target Start/End: Original strand, 13502449 - 13502604
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||  |||||||| |||||||| |||| |||||| ||||| || ||||||||||||||||| || |||||||||| ||| ||||||| |    
T  13502449 aaggttgtcaaaatt-gaattttgtttcaagtggaaagggaagagtaaaatcgaaaatcgtaaaatcgtaatcaaaattgaaggatattagtcaactatt 13502547  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| ||| ||||||||||  ||||||||||||||||||||| |||||||||||    
T  13502548 tttgtagaatctatataagaaatcgtaaaatcgcaatcaaaatcgatggattttacc 13502604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 20063847 - 20063713
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||| |||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||| |||| |||||| ||||||||  |  |||| | |||    
T  20063847 gaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtccttgaagatgaagaaaaccgcaaaaccttgg 20063748  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    |||||||  ||||||| ||||||||||||||||||    
T  20063747 attttaggttttaagtcgggattttgacaacaatg 20063713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 119 - 246
Target Start/End: Complemental strand, 16767124 - 16766996
Alignment:
Q  119 gaattttgcttcaagtgaaaagagaagagcaaaatagacaa-tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgata 217  Q
    ||||||||||||| || ||||  |||||||||||| || || || |||||||| ||| || ||||||||||||||||||||||||||| ||| |||||||    
T  16767124 gaattttgcttcaggtcaaaaaggaagagcaaaatcgaaaaatcataaaatcgcaatcaaaattgaaggattttactcaactacttttatagaatcgata 16767025  T
Q  218 taagaaactgtaaaatcgcaatcaaaatc 246  Q
    |||||||  ||||||||||||||||||||    
T  16767024 taagaaatcgtaaaatcgcaatcaaaatc 16766996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 15588846 - 15588979
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||| ||||||||  |||||||||||||||| |  |||| ||||     
T  15588846 gaaatcgtaaaatcgcaataaaaaacgattgattttgtctattttgagattctactatgtatttgagttgttgaaggtgaagaaagacgcaaaatcctga 15588945  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    |||||| |  |||||| |||||||||||| |||||    
T  15588946 atttta-agattaagtcgggattttgacagcaatg 15588979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 103 - 247
Target Start/End: Original strand, 19262091 - 19262235
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||| ||||| ||| ||| ||||||||  || | ||| |||||||| |  | ||||||||||| ||| || || ||| ||||||||||||  |||    
T  19262091 aaggttgtcgaaatcggaactttacttcaagtcgaatgggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaagattttactcaaggact 19262190  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||    
T  19262191 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcg 19262235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 121 - 258
Target Start/End: Original strand, 15588648 - 15588785
Alignment:
Q  121 attttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataa 220  Q
    ||||||||||| ||  |||||||| || ||||| ||||||| |||||||| ||  || || |||||||||||||||| ||| || |||| ||||||||||    
T  15588648 attttgcttcaggtcgaaagagaaaagaaaaatcgacaatcataaaatcgcaaccaaaatcgaaggattttactcaattac-ttcgtaggatcgatataa 15588746  T
Q  221 gaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    |||| | |||||||||||||||||||| |||||||||||    
T  15588747 gaaattataaaatcgcaatcaaaatcgatggattttacc 15588785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 332 - 458
Target Start/End: Complemental strand, 19491982 - 19491855
Alignment:
Q  332 taaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattt--t 429  Q
    |||||||||||||||||||||||||||||  ||||||| ||||||| ||||||||||||||| || ||| |||||||||||  |||| ||| |||||  |    
T  19491982 taaaatcgcaatcaaaatcgatggattttacctatttt-ggattctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaatcctagattttat 19491884  T
Q  430 agaatttaagttgggattttgacaacaat 458  Q
    || |||||| | | |||||||||||||||    
T  19491883 aggatttaattcgagattttgacaacaat 19491855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 103 - 219
Target Start/End: Complemental strand, 19245943 - 19245827
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | ||||||||||||||  |||| ||| ||||||||  | ||||||||||||| ||| || ||  |||||||||||| |||||||    
T  19245943 aaggttgtcaaaatcgggattttgcttcaagttgaaagggaatagcaaaatcaaaaatcgtaaaatcgcaatcaaaatctaaggattttacttaactact 19245844  T
Q  203 tttgtagcatcgatata 219  Q
    ||||||| |||||||||    
T  19245843 tttgtagaatcgatata 19245827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 20064077 - 20063921
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| |   ||| ||||| ||  |||| ||| |||||||| || | ||||||||||| ||| || || |||| |||||||||||  |||    
T  20064077 aaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggact 20063978  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| ||||||||| |||| ||||||||||||| |||||||| |||||||||||    
T  20063977 tttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttacc 20063921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 325 - 409
Target Start/End: Original strand, 25539222 - 25539306
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaa 409  Q
    |||||||| |||||||| |||||||||||||||||||  |||||| ||||||| |||||||||| |||| |||||||||||||||    
T  25539222 gaaatcgttaaatcgcagtcaaaatcgatggattttgcttattttcggattctcctatggatttaagtcgttgaaggtgaagaaa 25539306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 140 - 258
Target Start/End: Original strand, 35565766 - 35565888
Alignment:
Q  140 gagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggatttta---ctcaactacttttgtagcatcgatataagaaactgtaaaatcgc 236  Q
    |||||||||||||| || ||| ||||||||| || ||| || |||||||||||   ||||||||||||||||| ||||||||||||||   ||||||| |    
T  35565766 gagaagagcaaaatcgataattgtaaaatcgcaactaaaatcgaaggattttattactcaactacttttgtagaatcgatataagaaatcataaaatcac 35565865  T
Q  237 aatcaaaatcg-tggattttacc 258  Q
    ||||||||||| |||||||||||    
T  35565866 aatcaaaatcgatggattttacc 35565888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 25538977 - 25539064
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||| ||| || ||| |||||||||||| |||||||||||||| |||||||||| ||| |||||||| |||||||||||||    
T  25538977 tcgtaaaatcgcaatcaaaattaaaggattttactgaactacttttgtagaatcgatataaaaaattgtaaaattgcaatcaaaatcg 25539064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 352 - 462
Target Start/End: Original strand, 1690785 - 1690895
Alignment:
Q  352 atggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttga 451  Q
    |||| ||||| ||||||||||||| |||||||||| |||||| | ||||||||||||||||| |||| |||  ||||||  |||||||| ||  ||||||    
T  1690785 atgggttttgcctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttga 1690884  T
Q  452 caacaatggac 462  Q
    |||||||||||    
T  1690885 caacaatggac 1690895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 326 - 456
Target Start/End: Complemental strand, 31578136 - 31578007
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgga 425  Q
    |||||||||||| ||||||||||| |||||||||||  |||||| ||||||||||| |||||| | || ||||||||||||||| ||  |||| | |  |    
T  31578136 aaatcgtaaaattgcaatcaaaattgatggattttgcttattttaggattctacta-ggatttaaatcgttgaaggtgaagaaaatcgcaaaatcttaaa 31578038  T
Q  426 ttttagaatttaagttgggattttgacaaca 456  Q
    |||||  |||||||| |||||||||||||||    
T  31578037 ttttaacatttaagtcgggattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 1405077 - 1404993
Alignment:
Q  163 taaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||||||| ||| || || ||||||||||||||||  |||||||||| ||||||||| |||| |||||||| |||||||||||||    
T  1405077 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcg 1404993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 107 - 258
Target Start/End: Original strand, 31237755 - 31237907
Alignment:
Q  107 ttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttg 206  Q
    ||||||||||||| | ||| |||||  | ||||| ||| || ||||| |  | ||||||||||| ||| || || ||||||||||||||||  |||||||    
T  31237755 ttgtcaaaatcaggactttacttcagttcaaaagggaatagtaaaatcgggactcgtaaaatcgcaatcaatatcgaaggattttactcaaggacttttg 31237854  T
Q  207 tagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||  |||||||||  ||| |||||||| ||||||||||||| |||||||||||    
T  31237855 taaaatcgatatagaaaattgtaaaattgcaatcaaaatcgatggattttacc 31237907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 30433109 - 30433013
Alignment:
Q  163 taaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    |||||||| ||| || || ||| ||||||||||||  |||||| ||| ||||||||| |||| |||||||||||||||||||| | |||||||||||    
T  30433109 taaaatcgcaatcaaaatcgaatgattttactcaaggacttttatagaatcgatataggaaattgtaaaatcgcaatcaaaatagatggattttacc 30433013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 29661189 - 29661093
Alignment:
Q  136 aaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaat 233  Q
    |||| ||||||||||| | || |||||||||| || |||||| || ||||| ||||| | |||||||||||||| ||||||||||||||  |||||||    
T  29661189 aaaaaagaagagcaaa-tcgaaaatcgtaaaaccgcaattaaaatcgaaggtttttattaaactacttttgtagtatcgatataagaaatcgtaaaat 29661093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 13502566 - 13502601
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||||||||||||||||||||||||||||||||||    
T  13502566 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 13502601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 325 - 375
Target Start/End: Original strand, 1690724 - 1690774
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggatt 375  Q
    |||||||||||||||||||||||||| |||| ||| | |||||||||||||    
T  1690724 gaaatcgtaaaatcgcaatcaaaatcaatgggtttcgcctattttgggatt 1690774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 353 - 459
Target Start/End: Complemental strand, 15266187 - 15266081
Alignment:
Q  353 tggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgac 452  Q
    ||||||||  ||||||||| ||| ||  |||||||||| ||||||||| |||| ||||| | |||| |||| ||||||| |||||| |   |||||||||    
T  15266187 tggatttttcctattttggaattataacatggatttgaatcattgaagatgaataaagttacaaaatcctgaattttaggatttaaatcatgattttgac 15266088  T
Q  453 aacaatg 459  Q
    |||||||    
T  15266087 aacaatg 15266081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 216
Target Start/End: Original strand, 20034040 - 20034110
Alignment:
Q  146 agcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgat 216  Q
    |||||||| || | ||||||||||| ||| || |||||||||||||||||||  |||||||||| ||||||    
T  20034040 agcaaaatcgagactcgtaaaatcgcaatcaaaattgaaggattttactcaaggacttttgtagaatcgat 20034110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 1690582 - 1690647
Alignment:
Q  182 gaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||||| |||||| ||||||||||||   |||||||||||||   |||||||||||||||||||||    
T  1690582 gaaggaatttactgaactacttttgttaaatcgatataagaattcgtaaaatcgcaatcaaaatcg 1690647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 412
Target Start/End: Original strand, 5395674 - 5395731
Alignment:
Q  355 gattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtc 412  Q
    ||||||| |||||||| |||||| |||||||||||||||||| ||| |||| ||||||    
T  5395674 gattttgcctattttgagattctgctatggatttgagtcatttaagatgaataaagtc 5395731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 103 - 239
Target Start/End: Complemental strand, 8428576 - 8428440
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | ||||||||| | ||  |||| ||| || |||||  | |||  |||||||| ||| || || |||||||||| |||||||| |    
T  8428576 aaggttgtcaaaatcgggattttgctttaggtcgaaagggaatagaaaaatcaaaaattctaaaatcgcaatcaaaatcgaaggattttgctcaactatt 8428477  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaat 239  Q
    ||||||| ||| |||| | |||  |||||||||||||    
T  8428476 tttgtagaatcaatatcaaaaatcgtaaaatcgcaat 8428440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 407 - 459
Target Start/End: Complemental strand, 19245204 - 19245152
Alignment:
Q  407 aaagtcataaaaacctggattttagaatttaagttgggattttgacaacaatg 459  Q
    |||||| ||||| |||| |||||| ||||||||| ||||||||||||||||||    
T  19245204 aaagtcgtaaaatcctgaattttaaaatttaagtcgggattttgacaacaatg 19245152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 245
Target Start/End: Complemental strand, 27407107 - 27407003
Alignment:
Q  142 gaagagcaaaatagacaa-tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatc 240  Q
    |||||||||||| || || |||||| |||| ||| || ||  ||| |||||||||||||||||||| |  ||| ||||||||||   |||||||||||||    
T  27407107 gaagagcaaaatcgaaaaatcgtaatatcgcaatcaaaatccaagaattttactcaactacttttggataatcaatataagaaatcataaaatcgcaatc 27407008  T
Q  241 aaaat 245  Q
    |||||    
T  27407007 aaaat 27407003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 356 - 412
Target Start/End: Complemental strand, 31023325 - 31023269
Alignment:
Q  356 attttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtc 412  Q
    |||||| ||||||| ||||||||||||| ||||||||| ||||| ||||| ||||||    
T  31023325 attttgcctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtc 31023269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 326 - 358
Target Start/End: Complemental strand, 34841816 - 34841784
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggatt 358  Q
    |||||||||||||||||||||||||||||||||    
T  34841816 aaatcgtaaaatcgcaatcaaaatcgatggatt 34841784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 974635 - 974576
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatata 219  Q
    ||||||||||| ||| || || ||||||||||||||||  |||||||||| |||||||||    
T  974635 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatata 974576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 36430145 - 36430046
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||||||| ||| || || ||||||| ||||||||  | |||||||| ||||||| || |||   |||||| ||||||||||||| |||||||||||    
T  36430145 tcgtaaaatcgcaatcaaaatcgaaggatattactcaataatttttgtagaatcgataaaaaaaaaattaaaattgcaatcaaaatcgatggattttacc 36430046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 364 - 458
Target Start/End: Complemental strand, 16766804 - 16766710
Alignment:
Q  364 tattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaat 458  Q
    |||||| ||||||| |||||||||||| || ||||||||||| ||| || ||||| |||  ||||||  ||||||||    ||||||||||||||    
T  16766804 tattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaacaat 16766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 412
Target Start/End: Complemental strand, 34841648 - 34841602
Alignment:
Q  366 ttttgggattctactatggatttgagtcattgaaggtgaagaaagtc 412  Q
    |||||| ||||| ||||||||||||||| ||||||||||| ||||||    
T  34841648 ttttggtattctcctatggatttgagtcgttgaaggtgaataaagtc 34841602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 6e-43; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 43235001 - 43234868
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||| |||||||||||||||||||||  ||||||| |||||||||||||||||| |||| ||||||||||||||||||  |||| ||||     
T  43235001 gaaatcgtaaaatcacaatcaaaatcgatggatttttcctattttaggattctactatggatttaagtcgttgaaggtgaagaaagtcgcaaaatcctga 43234902  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||| ||||||||||||||||||||||||||    
T  43234901 attttaggatttaagttgggattttgacaacaat 43234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 19579075 - 19578941
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| ||||||||||||||| ||  |||| |||||    
T  19579075 gaaatcgtaaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctgg 19578976  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||  ||||||||||| |||||||||||||||    
T  19578975 attttatgatttaagttggaattttgacaacaatg 19578941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 325 - 460
Target Start/End: Original strand, 21059152 - 21059286
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||||| |||||| |||||| |||||||||| ||||||||||||| ||||| ||||||||||||  |||| ||| |    
T  21059152 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttagggattctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctag 21059250  T
Q  425 attttagaatttaagttgggattttgacaacaatgg 460  Q
    ||||||| |||||| | |||||||||||||||||||    
T  21059251 attttaggatttaaatcgggattttgacaacaatgg 21059286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 18051526 - 18051660
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| | |||||||||| |||||||||| |||||| |||||||||||  |||| |||      
T  18051526 gaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttagaattctactatagatttgagtcgttgaagttgaagaaagtcgcaaaatcctat 18051625  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||||| ||||||||||||||||||    
T  18051626 attttaggatttaagtcgggattttgacaacaatg 18051660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 333 - 458
Target Start/End: Complemental strand, 20923843 - 20923718
Alignment:
Q  333 aaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttaga 432  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||  ||| ||||||||||||||||||  ||||  |||||||||||     
T  20923843 aaaatcgcaatcaaaatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttagg 20923744  T
Q  433 atttaagttgggattttgacaacaat 458  Q
    |||||||| |||||||||||||||||    
T  20923743 atttaagtcgggattttgacaacaat 20923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 325 - 457
Target Start/End: Complemental strand, 18843848 - 18843716
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||| ||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  |||| ||||     
T  18843848 gaaatcgtataattgcaatcaaaatcgatgaattttgtctattttgggattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 18843749  T
Q  425 attttagaatttaagttgggattttgacaacaa 457  Q
    ||| ||| |||||||| || ||||| |||||||    
T  18843748 attataggatttaagtcggaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 325 - 460
Target Start/End: Original strand, 22645715 - 22645850
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||| ||||||||||||||||||| |||||| |||   |||||||||||| |||||||||||| | || ||||||||||||||||||  ||||  ||||    
T  22645715 gaaattgtaaaatcgcaatcaaaatagatggaatttacttattttgggattttactatggatttaaatcgttgaaggtgaagaaagtcgcaaaatactgg 22645814  T
Q  425 attttagaatttaagttgggattttgacaacaatgg 460  Q
    ||||||| |||||||| |||||||||||||||||||    
T  22645815 attttaggatttaagtcgggattttgacaacaatgg 22645850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 326 - 457
Target Start/End: Original strand, 23172425 - 23172560
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggat----tttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacc 421  Q
    ||||||||||||||| |||||||||||| |||    ||||||||||||||||||||||||||||||| |||| |||||| |||||||||||  |||| ||    
T  23172425 aaatcgtaaaatcgcgatcaaaatcgatcgatgaattttgtctattttgggattctactatggatttaagtcgttgaagatgaagaaagtcgcaaaatcc 23172524  T
Q  422 tggattttagaatttaagttgggattttgacaacaa 457  Q
    |  ||||||| |||||||| ||||||||||||||||    
T  23172525 taaattttaggatttaagtcgggattttgacaacaa 23172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 38158250 - 38158383
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||  ||| ||||||| ||||||||||||||||||||||||||||| |||||||||||  ||||| || |||||||||  |||| ||| |    
T  38158250 gaaatcgtaaaataacaaccaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtcaagaaagtcgcaaaatcctag 38158349  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||| |||||||| || ||||||||||||||    
T  38158350 attttaggatttaagtcggaattttgacaacaat 38158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 103 - 247
Target Start/End: Original strand, 27339962 - 27340106
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| ||| ||| ||||||||  |||| ||| |||||||| || |||||| |||||| ||| || || |||||||||||||||   |||    
T  27339962 aaggttgtcaaaatcggaactttacttcaagttgaaagggaatagcaaaatcgaaaatcgtgaaatcgcaatcaaaatcgaaggattttactcacggact 27340061  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||| || |||||||||||   ||||||||||||||||||||    
T  27340062 tttgtagaattgatataagaaatattaaaatcgcaatcaaaatcg 27340106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 327 - 409
Target Start/End: Complemental strand, 20321074 - 20320992
Alignment:
Q  327 aatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaa 409  Q
    ||||||||||||||||||||| | |||| ||||| |||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  20321074 aatcgtaaaatcgcaatcaaagttgatgaattttatctattttggaattttactatggattttagtcattgaaggtgaagaaa 20320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 325 - 409
Target Start/End: Complemental strand, 19979732 - 19979648
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaa 409  Q
    |||||||||||||||||||||||||| ||||||||||  | |||||||||||||| ||| ||||||||| |||||| ||||||||    
T  19979732 gaaatcgtaaaatcgcaatcaaaatccatggattttgcgtgttttgggattctaccatgaatttgagtcgttgaagatgaagaaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 104 - 258
Target Start/End: Complemental strand, 18844068 - 18843913
Alignment:
Q  104 aggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactactt 203  Q
    |||||||||||||| ||| ||| ||||| ||  |||| ||| |||||||| |  | ||||||||||| ||| || || | || |||||||||||  ||||    
T  18844068 aggttgtcaaaatcggaactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcggagtattttactcaaggactt 18843969  T
Q  204 ttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    |||||| ||| ||||| |||| |||||||||||||||||||||| |||||||||||    
T  18843968 ttgtagaatccatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 18843913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 332 - 450
Target Start/End: Original strand, 27340189 - 27340307
Alignment:
Q  332 taaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttag 431  Q
    ||||||| ||||||||||||||| |||||| |||||||  ||||||||||| |||||||||| |||||| |||||||||||  |||| | |  ||||||     
T  27340189 taaaatctcaatcaaaatcgatgaattttgcctattttaagattctactatagatttgagtcgttgaagatgaagaaagtcgcaaaatcataaattttat 27340288  T
Q  432 aatttaagttgggattttg 450  Q
     |||||||| |||||||||    
T  27340289 gatttaagtcgggattttg 27340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 384 - 456
Target Start/End: Original strand, 19042444 - 19042516
Alignment:
Q  384 gatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaaca 456  Q
    |||||||||| ||||||||||||||||||| |||| | |  ||||||||||||||||||||||||||||||||    
T  19042444 gatttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaaca 19042516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 20321237 - 20321141
Alignment:
Q  163 taaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    |||||||| ||| || |||||||||||||||| ||  |||||||||| ||| ||||| |||| |||||||||||||||||||||| |||||||||||    
T  20321237 taaaatcgcaatcaaaattgaaggattttactgaaggacttttgtagaatctatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 20321141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 43235162 - 43235078
Alignment:
Q  163 taaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||||||| ||| || || ||||||||||||||||  |||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  43235162 taaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataaaaaattgtaaaatcgcaatcaaaatcg 43235078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 23172265 - 23172347
Alignment:
Q  165 aaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||||||||| || || |||| |||||||||||  |||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  23172265 aaatcgtaatcaaaatcgaagaattttactcaaagacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcg 23172347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 325 - 447
Target Start/End: Original strand, 41688661 - 41688782
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||||| ||||||  |||||| | ||| ||||||  |||| |||| ||||||||||||||| |   |||| || |     
T  41688661 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttactataaatttaagtcgttgaaggtgaagaaaattgcaaaatcc-ga 41688759  T
Q  425 attttagaatttaagttgggatt 447  Q
    ||||||| |||||||||||||||    
T  41688760 attttaggatttaagttgggatt 41688782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 43005693 - 43005778
Alignment:
Q  162 gtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||| ||| || |||||| |||||||||||||| ||||||||| ||||||||| ||||  ||||||||||||| |||||||    
T  43005693 gtaaaatcgcaatcaaaattgaaagattttactcaacttcttttgtagaatcgatataggaaatcgtaaaatcgcaattaaaatcg 43005778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 137 - 257
Target Start/End: Complemental strand, 24648329 - 24648216
Alignment:
Q  137 aaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgc 236  Q
    |||| |||||| ||||| || ||||||||||||||||| || ||  ||||||||||||||||||||||||||| ||| ||||||        ||||||||    
T  24648329 aaagggaagagtaaaatcgaaaatcgtaaaatcgtaatcaaaatcaaaggattttactcaactacttttgtagaatcaatataa--------aaaatcgc 24648238  T
Q  237 aatcaaaatc-gtggattttac 257  Q
    |||||||||| |||||||||||    
T  24648237 aatcaaaatcggtggattttac 24648216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 146 - 256
Target Start/End: Original strand, 19042246 - 19042356
Alignment:
Q  146 agcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaat 245  Q
    ||||||||||  | ||||||||||  |||||| || |||| |||||||| ||  |||||||||| ||||||||| |||| |||||||||||||||||| |    
T  19042246 agcaaaatagggactcgtaaaatcacaattaaaatcgaagaattttacttaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaatt 19042345  T
Q  246 cgtggatttta 256  Q
      |||||||||    
T  19042346 gatggatttta 19042356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 257
Target Start/End: Original strand, 21058978 - 21059087
Alignment:
Q  150 aaatagacaatcgtaaaatcgtaattaagattgaaggatttt-actcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg- 247  Q
    |||| |||||||||||||||| ||  || || ||| |||||| ||| |||||||||||||| ||  |||||||||| | ||||||||||||||||||||     
T  21058978 aaatcgacaatcgtaaaatcgcaaccaaaatcgaaagatttttacttaactacttttgtagaatttatataagaaattataaaatcgcaatcaaaatcga 21059077  T
Q  248 tggattttac 257  Q
    ||||||||||    
T  21059078 tggattttac 21059087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 38158118 - 38158195
Alignment:
Q  182 gaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||||||||||||||| |||||||| ||| || ||||||| ||||||||| |||||||||| | |||||||||||    
T  38158118 gaaggattttactcaactatttttgtagaatctatgtaagaaattgtaaaatcacaatcaaaattgatggattttacc 38158195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 19579237 - 19579141
Alignment:
Q  163 taaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    |||||||| ||| || || ||||||||| ||||||  |||||||||| |||| ||||  ||| |||||||||||||||||||||| |||||||||||    
T  19579237 taaaatcgcaatcaaaatcgaaggatttcactcaaggacttttgtagaatcgttatagaaaattgtaaaatcgcaatcaaaatcgatggattttacc 19579141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 19979922 - 19979858
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaa 167  Q
    ||||| ||||||||| | ||||||||||| || |||||||||||||||||| |||||||||||||    
T  19979922 aaggtggtcaaaatcgggattttgcttcaggtcaaaagagaagagcaaaatcgacaatcgtaaaa 19979858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 103 - 222
Target Start/End: Complemental strand, 19377957 - 19377838
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||||||| |||| | ||| ||| ||||| |||| ||| |||||||| || ||||||||| |   ||| || || ||||||||||||||||  |||    
T  19377957 aaggttgtcaaagtcagtactttactttaagtggaaagggaatagcaaaatcgagaatcgtaaatttacaatcaaaatcgaaggattttactcaaggact 19377858  T
Q  203 tttgtagcatcgatataaga 222  Q
    ||||||| ||||||||||||    
T  19377857 tttgtagaatcgatataaga 19377838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 41688520 - 41688585
Alignment:
Q  182 gaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||||| ||  |||||||||| |||||||||  ||| ||||||||||||||||||||||    
T  41688520 gaaggattttacttaaggacttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcg 41688585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 26021592 - 26021537
Alignment:
Q  184 aggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaat 239  Q
    |||||||||||||||||||| |||| |||||||||||||||  |||||||| ||||    
T  26021592 aggattttactcaactacttgtgtaacatcgatataagaaatcgtaaaatcacaat 26021537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 219
Target Start/End: Original strand, 13341472 - 13341588
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaa-tcgtaaaatcgtaattaagattgaaggattttactcaactac 201  Q
    ||||||||||||||| | |||||||||||| |  |||| ||| || ||||| || || ||||||||||| ||   | |||||||||||| |||| |||||    
T  13341472 aaggttgtcaaaatcgggattttgcttcaaatcgaaagggaatagaaaaattgaaaaatcgtaaaatcgcaaacgaaattgaaggattt-actcgactac 13341570  T
Q  202 ttttgtagcatcgatata 219  Q
    |||||||| |||||||||    
T  13341571 ttttgtagaatcgatata 13341588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 18051405 - 18051452
Alignment:
Q  200 acttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||||||||| ||||||||| |||| ||||||||||||| ||||||||    
T  18051405 acttttgtagaatcgatataggaaattgtaaaatcgcaagcaaaatcg 18051452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 18843951 - 18843916
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  18843951 gaaattgtaaaatcgcaatcaaaatcgatggatttt 18843916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 20321179 - 20321144
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  20321179 gaaattgtaaaatcgcaatcaaaatcgatggatttt 20321144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 19042414 - 19042448
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattt 359  Q
    ||||||||||||||||||||||||||||| |||||    
T  19042414 gaaatcgtaaaatcgcaatcaaaatcgatagattt 19042448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 19579178 - 19579144
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    |||| ||||||||||||||||||||||||||||||    
T  19579178 aaattgtaaaatcgcaatcaaaatcgatggatttt 19579144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 15446431 - 15446402
Alignment:
Q  329 tcgtaaaatcgcaatcaaaatcgatggatt 358  Q
    ||||||||||||||||||||||||||||||    
T  15446431 tcgtaaaatcgcaatcaaaatcgatggatt 15446402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 219
Target Start/End: Complemental strand, 30799672 - 30799635
Alignment:
Q  182 gaaggattttactcaactacttttgtagcatcgatata 219  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  30799672 gaaggattttacacaactacttttgtagaatcgatata 30799635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 325 - 358
Target Start/End: Original strand, 43005752 - 43005785
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatt 358  Q
    ||||||||||||||||||| ||||||||||||||    
T  43005752 gaaatcgtaaaatcgcaattaaaatcgatggatt 43005785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 6e-43; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 9770245 - 9770112
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| |||| ||| |    
T  9770245 gaaatcgtaaaatcgcaatcaaaattgatagattttgtctattttaggattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaatcctag 9770146  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    |||||||||||||||| | |||||| ||||||||    
T  9770145 attttagaatttaagtcgagattttaacaacaat 9770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 325 - 464
Target Start/End: Original strand, 5361959 - 5362098
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||| |||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| |||||| |||||||||||  |||| ||||     
T  5361959 gaaatcgtaaaatctcaatcaaaatcgatgggttttgcctattttggaattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctga 5362058  T
Q  425 attttagaatttaagttgggattttgacaacaatggacga 464  Q
    ||||||| |||||||| |||||||||||||||||| ||||    
T  5362059 attttaggatttaagtcgggattttgacaacaatgtacga 5362098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 325 - 460
Target Start/End: Complemental strand, 8889361 - 8889226
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||| ||||||||| |||| |||||||||| ||| |||| |||||    
T  8889361 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgggattctattatgaatttgagtcgttgatggtgaagaaattcacaaaatcctgg 8889262  T
Q  425 attttagaatttaagttgggattttgacaacaatgg 460  Q
    ||||||| |||||||| |||||||||||| ||||||    
T  8889261 attttaggatttaagtcgggattttgacatcaatgg 8889226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 8011212 - 8011345
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||| |||||||||||||||||||||| ||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||     
T  8011212 gaaatcgcaaaatcgcaatcaaaatcgatgaattttgctcattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 8011311  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||| |||| |||||||||||||||||||||    
T  8011312 attttaggatttgagttgggattttgacaacaat 8011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 326 - 459
Target Start/End: Complemental strand, 13023702 - 13023566
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggattttgtctatttt--gggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctg 423  Q
    |||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||  |||| |||     
T  13023702 aaatcgtaaaatcgcaatcaaaatcgattgattttatctattttttgggattctactatggatttgagtcattgaaggtgaagaaagtcgcaaaatccta 13023603  T
Q  424 ga-ttttagaatttaagttgggattttgacaacaatg 459  Q
     | |||||| |||||||||||||||||||||||||||    
T  13023602 aatttttaggatttaagttgggattttgacaacaatg 13023566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 10143032 - 10142898
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||| ||||||||  ||||   |      
T  10143032 gaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttggaattatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaa 10142933  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    |||||||||||||||| |||||||| |||||||||    
T  10142932 attttagaatttaagtcgggattttcacaacaatg 10142898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 103 - 247
Target Start/End: Original strand, 6346730 - 6346874
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| ||| ||||||||| ||  |||| |||||||||||| || ||||||||||||  ||| || || |||||||||||||||||||||    
T  6346730 aaggttgtcaaaatcggaaatttgcttcaggtcgaaagggaagagcaaaatcgaaaatcgtaaaatcacaatcaaaatcgaaggattttactcaactact 6346829  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||| ||  |||||||||| ||||||||||||||||||||||    
T  6346830 tttgtagaatgaatataagaaattgtaaaatcgcaatcaaaatcg 6346874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 103 - 245
Target Start/End: Complemental strand, 37240593 - 37240450
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||||||||| ||| |||||||||| |   |||||||||||| |||| |||||||||||||||| ||| || || |||||||||||||||||||||    
T  37240593 aaggttgtcaaaattagagttttgcttcaggacgaaagagaagagctaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaactact 37240494  T
Q  203 tttgtagcatcgatat-aagaaactgtaaaatcgcaatcaaaat 245  Q
    ||||||| |||||||| ||||||  |||||||| ||||||||||    
T  37240493 tttgtagaatcgatataaagaaatcgtaaaatcacaatcaaaat 37240450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 13551618 - 13551752
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||  |||||| |||||||||||||| ||||||||||| ||||||  |||| |||      
T  13551618 gaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaa 13551717  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| || ||||| | ||||||||||||||||    
T  13551718 attttaggatataagtcgagattttgacaacaatg 13551752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 325 - 456
Target Start/End: Complemental strand, 5375797 - 5375666
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||   |||||| |||| |||| |||| ||||||||||||||||||  |||| | |      
T  5375797 gaaatcgtaaaatcgcaatcaaagtcgatgaattttgtctattttaaaattctattatgaattttagtcgttgaaggtgaagaaagtcgcaaaatcttaa 5375698  T
Q  425 attttagaatttaagttgggattttgacaaca 456  Q
    ||||||||||||| ||||||||||||||||||    
T  5375697 attttagaatttaggttgggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 103 - 257
Target Start/End: Complemental strand, 17466433 - 17466278
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||||||||   | ||||||||||||||  ||||||  ||||||||| |||||||||||||| | ||  || |||||| |||| ||||||||||||    
T  17466433 aaggttgtcaaaactggcattttgcttcaagtcgaaagagctgagcaaaatcgacaatcgtaaaattgcaaacaaaattgaaagattatactcaactact 17466334  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttac 257  Q
    ||||| | |||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  17466333 tttgtggaatcgatataagaaattgtaaaattgcaatcaaaatcgatggattttac 17466278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 23064959 - 23065093
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||| ||||| |||||||||||||||   ||||||| | ||||||| ||||||||||||| ||||| ||||||||||| | ||||  ||||    
T  23064959 gaaatcgtaaaattgcaattaaaatcgatggatttgacctattttagaattctacaatggatttgagtcgttgaatgtgaagaaagttacaaaatactgg 23065058  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    |||||||||||||||| ||| |||| |||||||||    
T  23065059 attttagaatttaagtcggggttttaacaacaatg 23065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 37240390 - 37240261
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||| |||||||||||||||||||| ||||||||||| |||||| |||    ||      
T  37240390 gaaatcgtaaaatcgcaatcaaaatcgatgaattatgcctattttggg-ttctactatggatttgagtcgttgaaggtgaaaaaagtcgtaa----ctaa 37240296  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||||| |||||||| |||||||||    
T  37240295 attttaggatttaagtagggattttaacaacaatg 37240261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 325 - 457
Target Start/End: Complemental strand, 17466212 - 17466080
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||| ||||||||||||||||  |||||| |||||||| |||||||||||||| || ||| |||||||| ||  |||| |||      
T  17466212 gaaatcgtaaaatcgcaatctaaatcgatggattttgcttattttaggattctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaa 17466113  T
Q  425 attttagaatttaagttgggattttgacaacaa 457  Q
    ||||||  ||||||||||| |||||||||||||    
T  17466112 attttaagatttaagttggaattttgacaacaa 17466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 5361774 - 5361880
Alignment:
Q  137 aaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgc 236  Q
    |||||||||||||||||||||||||||||||| | ||  || || ||||| |||||||||||||||||||||| ||||||||| ||||  ||||||||||    
T  5361774 aaagagaagagcaaaatagacaatcgtaaaattgcaaacaaaatcgaagggttttactcaactacttttgtagaatcgatatatgaaatcgtaaaatcgc 5361873  T
Q  237 aatcaaa 243  Q
    |||||||    
T  5361874 aatcaaa 5361880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 325 - 411
Target Start/End: Original strand, 9911407 - 9911493
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagt 411  Q
    ||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||  | | |||||||||||||||||    
T  9911407 gaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaggattctactatggatttaggccgttgaaggtgaagaaagt 9911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 36120957 - 36120823
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||||| ||||||  |||||| | ||| || ||||||||| |||| ||||||||||||||| ||  |||| |||      
T  36120957 gaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttattatggatttaagtcgttgaaggtgaagaaaatcgcaaaatcctaa 36120858  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    |||||| ||||||| | || |||||||||||||||    
T  36120857 attttaaaatttaaatcggaattttgacaacaatg 36120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 103 - 243
Target Start/End: Complemental strand, 10394964 - 10394824
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagt-gaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactac 201  Q
    ||||||||||||||  |||||||||||||||| ||||||| |||||||||||  | ||||||||||||| ||| || || |||||| |||||||||||||    
T  10394964 aaggttgtcaaaattggaattttgcttcaagttgaaaaga-aagagcaaaatcaaaaatcgtaaaatcgcaatcaaaatcgaaggactttactcaactac 10394866  T
Q  202 ttttgtagcatcgatataagaaactgtaaaatcgcaatcaaa 243  Q
    |||||||| |||| |||| ||||  |||||||  ||||||||    
T  10394865 ttttgtagaatcggtataggaaatcgtaaaattacaatcaaa 10394824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 457
Target Start/End: Complemental strand, 7044831 - 7044728
Alignment:
Q  354 ggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgaca 453  Q
    ||||||||  |||||||||||||| ||||||||||||||| ||||||||||| |||||   |||| | |||||||||| |||||||| ||||||||||||    
T  7044831 ggattttgcttattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgaca 7044732  T
Q  454 acaa 457  Q
    ||||    
T  7044731 acaa 7044728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 8010968 - 8011055
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||| ||| || || ||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||||    
T  8010968 tcgtaaaatcgcaatcaaaatcgaaggattttactcaactatttttatagaatcgatataagaaattgtaaaatcgcaatcaaaatcg 8011055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 146 - 245
Target Start/End: Complemental strand, 10143211 - 10143112
Alignment:
Q  146 agcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaat 245  Q
    ||||||||  ||||||||||||||| ||| || || ||||||||||| ||||||| |||||||| |||||||||||| | ||||||||||||||||||||    
T  10143211 agcaaaattaacaatcgtaaaatcgcaatcaaaatcgaaggattttattcaactaattttgtagaatcgatataagagattgtaaaatcgcaatcaaaat 10143112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 103 - 224
Target Start/End: Original strand, 18459406 - 18459527
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||||||||||   ||||||||||| ||  ||||  ||||||||||| |||||||||||||||| |||||| || ||||||||| ||| ||||| |    
T  18459406 aaggttgtcaaaatcgagattttgcttcaggttgaaaggaaagagcaaaatcgacaatcgtaaaatcgcaattaaaatcgaaggatttgacttaactaat 18459505  T
Q  203 tttgtagcatcgatataagaaa 224  Q
    ||||||| || |||||||||||    
T  18459506 tttgtagaattgatataagaaa 18459527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 36121120 - 36121021
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||||||| ||| || || ||| ||||||||||||  |||||||||| ||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  36121120 tcgtaaaatcggaatcaaaatcgaaagattttactcaaggacttttgtagtatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 36121021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 5943068 - 5943166
Alignment:
Q  137 aaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcg 235  Q
    |||| ||||||||||||  | ||||||||||||| || ||| ||||||||||||||||||||||||||||||| |||| | |||||||  |||||||||    
T  5943068 aaagggaagagcaaaatcaaaaatcgtaaaatcgcaagtaaaattgaaggattttactcaactacttttgtagaatcggtttaagaaatcgtaaaatcg 5943166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 355 - 458
Target Start/End: Complemental strand, 4156866 - 4156763
Alignment:
Q  355 gattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaa 454  Q
    |||||||  |||||| |||||||||||  |||||||||| || |||||||| |||||||||||| |||  ||||||  |||||||| |||||||||||||    
T  4156866 gattttgcttattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaa 4156767  T
Q  455 caat 458  Q
    ||||    
T  4156766 caat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 9911243 - 9911330
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||| ||| || |  |||||||||||||| |  |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  9911243 tcgtaaaatcgcaataaaaaacgaaggattttactcgagaacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcg 9911330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 23064793 - 23064880
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||| ||| || |||||||||||||| ||||  |||||||||| ||||||||| |||| |||||||| |||||||||||||    
T  23064793 tcgtaaaatcgcaatcaaaattgaaggattttattcaaggacttttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcg 23064880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 8889570 - 8889465
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | ||||||||||| ||  ||||||| ||||||||| |||||| ||||||||| ||  || || ||||||| |||||||||||||    
T  8889570 aaggttgtcaaaatcgggattttgcttcaggtcgaaagaga-gagcaaaattgacaattgtaaaatcgcaaccaaaatcgaaggatcttactcaactact 8889472  T
Q  203 tttgtag 209  Q
    |||||||    
T  8889471 tttgtag 8889465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 365 - 459
Target Start/End: Complemental strand, 24719610 - 24719516
Alignment:
Q  365 attttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaatg 459  Q
    ||||| ||||||| ||||||||||||||| ||||||||||| ||||||  |||| | || ||||||||| |||||| | ||||||||||||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaacaatg 24719516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 24719922 - 24719785
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||||||||||   ||||||||||| ||  |||| |||||||||||| ||       ||||||| ||| |  || |||||||||||||| | ||||    
T  24719922 aaggttgtcaaaatcgagattttgcttcaggtcgaaagggaagagcaaaatcga-------aaaatcgaaatcacaatcgaaggattttactcgattact 24719830  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||    
T  24719829 tttgtagaatcgatataagaaatcgtaaaatcgcaatcaaaatcg 24719785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 7452859 - 7452739
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||||||||| || ||||||||||| ||  |||| |||||| ||| | || ||||||||||||| ||| || || |||||| ||||||||||||||    
T  7452859 aaggttgtcaaaattaggattttgcttcaggtcgaaagggaagagaaaagttgaaaatcgtaaaatcgcaatcaaaatcgaagga-tttactcaactact 7452761  T
Q  203 tttgtagcatcgatataagaaa 224  Q
    ||||||| ||| ||||| ||||    
T  7452760 tttgtagaatcaatatacgaaa 7452739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 354 - 459
Target Start/End: Original strand, 18459733 - 18459838
Alignment:
Q  354 ggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgaca 453  Q
    |||||||| ||||||| ||||||| ||||||||||||||| ||||| ||||| | ||||  |||| | |||||||||| |||| ||| |||||||| |||    
T  18459733 ggattttgcctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttaca 18459832  T
Q  454 acaatg 459  Q
    ||||||    
T  18459833 acaatg 18459838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 354 - 454
Target Start/End: Complemental strand, 7815661 - 7815561
Alignment:
Q  354 ggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgaca 453  Q
    |||||||| |||||||||||||||||||||| ||||||||  | ||| |||| ||||||| ||||  ||| ||||||| |||||||| |||||||| |||    
T  7815661 ggattttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaaca 7815562  T
Q  454 a 454  Q
    |    
T  7815561 a 7815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 9770466 - 9770322
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | | ||| ||| | ||  |||| ||| |||||||| |  | ||||||||||| ||| || || ||||||||||||||||   ||    
T  9770466 aaggttgtcaaaatcgggactttactttaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtct 9770367  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||| |||||||||  ||| ||||||||||||||||||||||    
T  9770366 tttgtagaatcgatatagcaaattgtaaaatcgcaatcaaaatcg 9770322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 5375962 - 5375863
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||||||| ||| || || ||||||||||||||||  |||| ||||| ||| ||||| |||| ||||||||| |||||||||||| |||||||||||    
T  5375962 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttctgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatggattttacc 5375863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 4157377 - 4157269
Alignment:
Q  110 tcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatc---gtaaaatcgtaattaagattgaaggattttactcaactacttttg 206  Q
    |||||||| | ||||||||| ||||  |||| |||||||||||| || ||||   ||||||||| ||| ||||| ||| |||||||||||||||||||||    
T  4157377 tcaaaatcgggattttgctttaagtcgaaagggaagagcaaaatcgaaaatcattgtaaaatcgcaatcaagatcgaaagattttactcaactacttttg 4157278  T
Q  207 tagcatcga 215  Q
    ||| |||||    
T  4157277 tagaatcga 4157269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 4157664 - 4157556
Alignment:
Q  110 tcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatc---gtaaaatcgtaattaagattgaaggattttactcaactacttttg 206  Q
    |||||||| | ||||||||| ||||  |||| |||||||||||| || ||||   ||||||||| ||| ||||| ||| |||||||||||||||||||||    
T  4157664 tcaaaatcgggattttgctttaagtcgaaagggaagagcaaaatcgaaaatcattgtaaaatcgcaatcaagatcgaaagattttactcaactacttttg 4157565  T
Q  207 tagcatcga 215  Q
    ||| |||||    
T  4157564 tagaatcga 4157556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 353 - 459
Target Start/End: Original strand, 6347088 - 6347194
Alignment:
Q  353 tggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgac 452  Q
    ||||||||  |||||||| || ||  ||||||||||||||| |||||||| || |||||   |||| |||||||||||| ||||||||||| ||||||||    
T  6347088 tggattttacctattttgagactcggctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgac 6347187  T
Q  453 aacaatg 459  Q
    || ||||    
T  6347188 aataatg 6347194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 103 - 246
Target Start/End: Complemental strand, 7045298 - 7045153
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||  ||||||| ||||| ||  |||| ||||||||||||  | |||| |||||||| ||| || || |||||||||||||||||| ||    
T  7045298 aaggttgtcaaaataggaattttacttcaggtcgaaagggaagagcaaaatcaaaaatcataaaatcgcaatcaaaatcgaaggattttactcaactgct 7045199  T
Q  203 tttgtagcatc--gatataagaaactgtaaaatcgcaatcaaaatc 246  Q
    |||  || |||  |||||||||||  |||||||  |||||||||||    
T  7045198 tttcaagaatcgagatataagaaatcgtaaaatatcaatcaaaatc 7045153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 354 - 459
Target Start/End: Complemental strand, 7452523 - 7452419
Alignment:
Q  354 ggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgaca 453  Q
    |||||||| |||| || ||| || |||||||||| ||||| ||||||||||| |||||   ||||  |||||||||||||||||||| |||||||| |||    
T  7452523 ggattttgcctatattaggaatccactatggatt-gagtcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcaca 7452425  T
Q  454 acaatg 459  Q
    ||||||    
T  7452424 acaatg 7452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 7045057 - 7044961
Alignment:
Q  163 taaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    |||||||| ||| || || ||| ||||||||||||||||||||| |  ||||||||||||||  |||||||  |||||||||||| |||||||||||    
T  7045057 taaaatcgcaatcaaaatcgaatgattttactcaactacttttgaataatcgatataagaaatcgtaaaatatcaatcaaaatcgatggattttacc 7044961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 245
Target Start/End: Original strand, 9149573 - 9149640
Alignment:
Q  179 attgaaggattttactcaactacttttgtagcatcgatataagaaactgt-aaaatcgcaatcaaaat 245  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||  || |||| ||||||||||||    
T  9149573 attgaaggattttactcaactactttcgtagaatcgatataagaaatcgtaaaaaacgcaatcaaaat 9149640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 4157088 - 4157053
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||||||||||||||||||||||||||||||||||    
T  4157088 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 4157053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 55476285 - 55476223
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataaga 222  Q
    ||||||||||| ||| || || ||||||||||||||||  |||||||||| ||||||||||||    
T  55476285 tcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataaga 55476223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 354 - 393
Target Start/End: Complemental strand, 7803110 - 7803071
Alignment:
Q  354 ggattttgtctattttgggattctactatggatttgagtc 393  Q
    |||||||||||||||||||||||| |||||| ||||||||    
T  7803110 ggattttgtctattttgggattctgctatgggtttgagtc 7803071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 36121059 - 36121024
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  36121059 gaaattgtaaaatcgcaatcaaaatcgatggatttt 36121024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 425 - 459
Target Start/End: Original strand, 610686 - 610720
Alignment:
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||||||||||||||||||||||||    
T  610686 attttagtatttaagttgggattttgacaacaatg 610720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 5361858 - 5361892
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattt 359  Q
    ||||||||||||||||||||||| |||||||||||    
T  5361858 gaaatcgtaaaatcgcaatcaaagtcgatggattt 5361892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 6346848 - 6346882
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattt 359  Q
    ||||| |||||||||||||||||||||||||||||    
T  6346848 gaaattgtaaaatcgcaatcaaaatcgatggattt 6346882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 326 - 359
Target Start/End: Complemental strand, 7452805 - 7452772
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggattt 359  Q
    ||||||||||||||||||||||||||| ||||||    
T  7452805 aaatcgtaaaatcgcaatcaaaatcgaaggattt 7452772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 10143199 - 10143166
Alignment:
Q  327 aatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    |||||||||||||||||||||||||| |||||||    
T  10143199 aatcgtaaaatcgcaatcaaaatcgaaggatttt 10143166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 13551504 - 13551589
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaat 245  Q
    ||||||||||| |||||| || |||||||||||||| |  |||||| ||| |||||| ||  ||| | ||||||| ||||||||||    
T  13551504 tcgtaaaatcgcaattaaaatcgaaggattttactcgaggacttttatagaatcgatttagaaaattttaaaatcacaatcaaaat 13551589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 325 - 354
Target Start/End: Complemental strand, 24719811 - 24719782
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatg 354  Q
    ||||||||||||||||||||||||||||||    
T  24719811 gaaatcgtaaaatcgcaatcaaaatcgatg 24719782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 37240538 - 37240505
Alignment:
Q  327 aatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    |||||||||||||||||||||||||| |||||||    
T  37240538 aatcgtaaaatcgcaatcaaaatcgaaggatttt 37240505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 4e-41; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 27221551 - 27221417
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||||||||||||||||||||| | |||||  |||||||||||| ||||||||| |||||| |||||||||||  |||| ||||     
T  27221551 gaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaagattctactatgtatttgagtcgttgaagatgaagaaagtcgcaaaatcctga 27221452  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||||||||||||||||||||| |||||||||    
T  27221451 attttagaatttaagttgggattttaacaacaatg 27221417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 24725473 - 24725607
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||| |||||| ||||||||| ||||||||||| |||||||| |||||||||||||||||||||  |||||||||||||||||| ||||| | |||    
T  24725473 gaaatcgtcaaatcgtaatcaaaattgatggattttgcctattttgcgattctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttgg 24725572  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| ||||||||  |||||||||||||||||    
T  24725573 attttaggatttaagtctggattttgacaacaatg 24725607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 4247489 - 4247356
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||  ||||| ||||||||||| | |||| ||||     
T  4247489 gaaatcataaaatcgcaatcaaaatcgatgaattttgcctattttgggattctactatggatttaagttgttgaaagtgaagaaagttacaaaatcctga 4247390  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||| |||||| |||||||||||||||||||    
T  4247389 attttaggatttaaattgggattttgacaacaat 4247356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 22687660 - 22687793
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||  |||||| |||||||||||  |||  ||||     
T  22687660 gaaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttgggattctgcgatggatttgagttgttgaagttgaagaaagtcgcaaattcctga 22687759  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||| |||||||| |||||||||||||||||    
T  22687760 attttaggatttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 11326519 - 11326386
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||| ||||||||||||||||||||||| ||||||| |||||||  ||||||||||||||||| ||||  |||||||||||||||||  |||| |||      
T  11326519 gaaattgtaaaatcgcaatcaaaatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaatcctaa 11326420  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||| ||||||||||||||||||||||||||    
T  11326419 attttaggatttaagttgggattttgacaacaat 11326386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 24990067 - 24990200
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||| |||| |||||||||| |||| |||      
T  24990067 gaaatcgtaaaattgcaatcaaaatcgatggattttgcctattttaggattctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaa 24990166  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||| | |||||||| || ||||||||||||||    
T  24990167 atttttggatttaagtcggaattttgacaacaat 24990200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 103 - 255
Target Start/End: Complemental strand, 39182510 - 39182357
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||||||||||   |||||||||||  |  ||||||||||| ||||| |||||||||||||||| ||  || || |||||||||||||||||||||    
T  39182510 aaggttgtcaaaatcgtgattttgcttcagttccaaagagaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttactcaactact 39182411  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggatttt 255  Q
    ||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||    
T  39182410 tttgtagaatcgatataagaaattgtaaaatcgcaaccaaaatcgatggatttt 39182357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 325 - 456
Target Start/End: Original strand, 8346529 - 8346660
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||  |||| |||      
T  8346529 gaaatcgtaaaatcgcaattaaaatcgatggatttttcctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaa 8346628  T
Q  425 attttagaatttaagttgggattttgacaaca 456  Q
    ||||||  ||||| ||  ||||||||||||||    
T  8346629 attttaatatttaggtcaggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 7730339 - 7730472
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||| |||||||| |||||||||||  || |||||||||||||||   |||||||||    
T  7730339 gaaatcgtaaaatctcaatcaaaatcgatggatttttcctattttggaattctactgtggatttgagttgttaaaggtgaagaaagtc-gcaaaacctgg 7730437  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| ||||||||  |||||||||||||||||    
T  7730438 attttaggatttaagtcaggattttgacaacaatg 7730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 329 - 459
Target Start/End: Complemental strand, 14055380 - 14055250
Alignment:
Q  329 tcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattt 428  Q
    |||||||||||||||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ||||||||||||||||||  |||| | |||||||    
T  14055380 tcgtaaaatcgcaatcaaaatctatggattttgcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattt 14055281  T
Q  429 tagaatttaagttgggattttgacaacaatg 459  Q
    ||| || ||||| |||||||| |||||||||    
T  14055280 taggatataagtggggattttcacaacaatg 14055250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 329 - 459
Target Start/End: Complemental strand, 14365408 - 14365278
Alignment:
Q  329 tcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattt 428  Q
    |||||||||||||||||||||| |||||||||| ||||||| | |||||||||| |||||||||| ||||||||||||||||||  |||| | |||||||    
T  14365408 tcgtaaaatcgcaatcaaaatctatggattttgcctattttagaattctactatagatttgagtcgttgaaggtgaagaaagtcgcaaaatcttggattt 14365309  T
Q  429 tagaatttaagttgggattttgacaacaatg 459  Q
    ||| || ||||| |||||||| |||||||||    
T  14365308 taggatataagtggggattttcacaacaatg 14365278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 6e-34
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 39182392 - 39182259
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||| |||||  |||| ||| |    
T  39182392 gaaattgtaaaatcgcaaccaaaatcgatggattttgcctattttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaatcctag 39182294  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| ||||||||  |||||||| ||||||||    
T  39182293 attttaggatttaagtcaggattttgtcaacaatg 39182259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 326 - 459
Target Start/End: Original strand, 8330042 - 8330175
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgga 425  Q
    |||||||||||||||||| |||||| ||| |||||  |||||||||||||||||||||||||||| || ||||||||||||||||||  |||| | || |    
T  8330042 aaatcgtaaaatcgcaattaaaatcaatgaatttttcctattttgggattctactatggatttgaatcgttgaaggtgaagaaagtcgcaaaatcatgaa 8330141  T
Q  426 ttttagaatttaagttgggattttgacaacaatg 459  Q
    |||||||||||| ||  |||||||||||||||||    
T  8330142 ttttagaatttaggtcaggattttgacaacaatg 8330175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 334 - 451
Target Start/End: Complemental strand, 8571367 - 8571250
Alignment:
Q  334 aaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaa 433  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| || |||||||||||||||  |||| |||||||||||  |    
T  8571367 aaatcgcaatcaaaatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatga 8571268  T
Q  434 tttaagttgggattttga 451  Q
    ||||||| ||||||||||    
T  8571267 tttaagtcgggattttga 8571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 102 - 258
Target Start/End: Complemental strand, 14055611 - 14055455
Alignment:
Q  102 aaaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactac 201  Q
    |||||||||||||||| || |||||||||| ||  ||||||| ||||||||| |||||| ||||||||| ||  || || ||||||||||||||||||||    
T  14055611 aaaggttgtcaaaatcgga-ttttgcttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttactcaactac 14055513  T
Q  202 ttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatc-gtggattttacc 258  Q
    |||||||| | |||||||||||| || ||||||||||||||||||  |||||||||||    
T  14055512 ttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttacc 14055455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 102 - 258
Target Start/End: Complemental strand, 14365639 - 14365483
Alignment:
Q  102 aaaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactac 201  Q
    |||||||||||||||| || |||||||||| ||  ||||||| ||||||||| |||||| ||||||||| ||  || || ||||||||||||||||||||    
T  14365639 aaaggttgtcaaaatcgga-ttttgcttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttactcaactac 14365541  T
Q  202 ttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatc-gtggattttacc 258  Q
    |||||||| | |||||||||||| || ||||||||||||||||||  |||||||||||    
T  14365540 ttttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttacc 14365483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 325 - 458
Target Start/End: Original strand, 44944841 - 44944978
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaag----gtgaagaaagtcataaaaac 420  Q
    ||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||| || ||||||    ||||||||||||  |||| |    
T  44944841 gaaatagtaaaatcccaatcaaaatcgatggattttgactattttaggattctactatggatttgaatcgttgaaggtgagtgaagaaagtcgcaaaatc 44944940  T
Q  421 ctggattttagaatttaagttgggattttgacaacaat 458  Q
    ||| ||||||| |||||||| |||||||||||||||||    
T  44944941 ctgaattttaggatttaagtcgggattttgacaacaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 325 - 460
Target Start/End: Original strand, 8343796 - 8343931
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||| ||||| ||||||||||   |||||||||||||||||||||||||||||| ||||||||||||||||||  |||| || ||    
T  8343796 gaaatcgtaaaatcgcaattaaaattgatggatttttcatattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatccagg 8343895  T
Q  425 attttagaatttaagttgggattttgacaacaatgg 460  Q
    ||||||| ||||| |    |||||||||||||||||    
T  8343896 attttaggatttaggccaagattttgacaacaatgg 8343931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 325 - 460
Target Start/End: Original strand, 26281306 - 26281440
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||| ||||||||| ||||||||||||||||||  |||||||| ||||||| ||||||||||||| ||||||||||||||||||  |||| ||||     
T  26281306 gaaatcgttaaatcgcaa-caaaatcgatggattttgcttattttggaattctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 26281404  T
Q  425 attttagaatttaagttgggattttgacaacaatgg 460  Q
    ||||||  |||||||| || ||||||||||||||||    
T  26281405 attttatgatttaagtcggaattttgacaacaatgg 26281440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 9685240 - 9685374
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||  |||||| |||||||||||||| ||||||||||| ||||||  |||| |||      
T  9685240 gaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctaa 9685339  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| || ||||| | ||||||||||||||||    
T  9685340 attttaggatataagtcgagattttgacaacaatg 9685374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 325 - 457
Target Start/End: Complemental strand, 5058662 - 5058530
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||||  |||||||| |||||||  |||||||||||||||||  ||| ||||||||||||||| ||  ||||  |||     
T  5058662 gaaatcgtaaaatcgcaatcaaaatcgtaggattttgcctattttaagattctactatggatttaggtcgttgaaggtgaagaaaatcgcaaaattctga 5058563  T
Q  425 attttagaatttaagttgggattttgacaacaa 457  Q
    ||||||| |||||||| ||||||||||||||||    
T  5058562 attttaggatttaagtcgggattttgacaacaa 5058530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 121 - 246
Target Start/End: Original strand, 8329772 - 8329897
Alignment:
Q  121 attttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataa 220  Q
    ||||||||| | ||| |||||||| | |||||| ||||||| |||||| | ||| || ||||||||||||||||||||||||||||||| || |||||||    
T  8329772 attttgcttgaggtggaaagagaataacaaaattgacaatcataaaattgcaatcaaaattgaaggattttactcaactacttttgtagaattgatataa 8329871  T
Q  221 gaaactgtaaaatcgcaatcaaaatc 246  Q
    ||||  ||||||||||||||||||||    
T  8329872 gaaatcgtaaaatcgcaatcaaaatc 8329897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 106 - 243
Target Start/End: Original strand, 8343580 - 8343717
Alignment:
Q  106 gttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactactttt 205  Q
    ||||| |||||||||||||||||||| ||  |||||||||| |||||| |||||||||||||  | ||| || || |||| |||||||||||||||||||    
T  8343580 gttgttaaaatcagaattttgcttcaggtcgaaagagaagaacaaaattgacaatcgtaaaaatgcaatcaaaatcgaagtattttactcaactactttt 8343679  T
Q  206 gtagcatcgatataagaaactgtaaaatcgcaatcaaa 243  Q
    |||| || ||||||| |||  |||||||||||||||||    
T  8343680 gtagaattgatataaaaaatcgtaaaatcgcaatcaaa 8343717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 325 - 418
Target Start/End: Complemental strand, 17811480 - 17811387
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaa 418  Q
    ||||||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  17811480 gaaatcgtaaaatcgcaatcaaaatcgatcgattttgtctattttaaaattctactatggatttgagtcgttgaaggtgaaaaaagtcacaaaa 17811387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 325 - 458
Target Start/End: Complemental strand, 5715422 - 5715290
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||| ||||||||||||||| ||||||  |||||||| ||||||||||| |||| |||  ||||||||| | ||||||  |||| ||||     
T  5715422 gaaatcgtaaaatcacaatcaaaatcgatgaattttgcttattttggaattctactatgaatttaagttgttgaaggtgta-aaagtcgcaaaatcctga 5715324  T
Q  425 attttagaatttaagttgggattttgacaacaat 458  Q
    ||||||| |||||||| |||||||||||||||||    
T  5715323 attttaggatttaagtcgggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 1977902 - 1977759
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||||  |||||||  ||||||||||| ||  ||||||||||| ||||| |||||||||||||||| ||| || || |||||||||||||||| || |    
T  1977902 aaggttggtaaaatcaagattttgcttcaggtcgaaagagaagagaaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaatta-t 1977804  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||| ||| ||||||||||||||   ||||||||||||||||||||    
T  1977803 tttttagaatcgatataagaaatcctaaaatcgcaatcaaaatcg 1977759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 103 - 258
Target Start/End: Original strand, 26565323 - 26565479
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||  | || || ||||| || ||||| ||||| |||||  || ||||||||||||||||| || || |||||||||||||||||||||    
T  26565323 aaggttgtcaaaattgggatctttcttcaggttaaaagggaagaacaaaaacgaaaatcgtaaaatcgtaatcaaaatcgaaggattttactcaactact 26565422  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| ||| |||||| |||  ||||||| ||||||||||| | |||||||||||    
T  26565423 tttgtagaatcaatataaaaaatcgtaaaattgcaatcaaaattgatggattttacc 26565479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 336 - 458
Target Start/End: Original strand, 21846433 - 21846554
Alignment:
Q  336 atcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatt 435  Q
    |||||||||||||||||| ||||||  || |||| | |||||||||||||| |||||| ||||| ||||| ||||||  |||| |||| |||||||||||    
T  21846433 atcgcaatcaaaatcgattgattttacctgttttagaattctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaatt 21846531  T
Q  436 taagttgggattttgacaacaat 458  Q
    ||||| |||||||||||||||||    
T  21846532 taagtcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 22687041 - 22687163
Alignment:
Q  102 aaaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactac 201  Q
    ||||||||| |||||| | |||||||||||  |  ||||||||||||||||| || ||||||||||||  ||  || ||||||| |||||||||||||||    
T  22687041 aaaggttgttaaaatcgggattttgcttcagatcgaaagagaagagcaaaatcgagaatcgtaaaatcacaaccaaaattgaagaattttactcaactac 22687140  T
Q  202 ttttgtagcatcgatataagaaa 224  Q
    |||||||| ||||||||||||||    
T  22687141 ttttgtagaatcgatataagaaa 22687163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 11325332 - 11325177
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||  | || |||||||| || |||||||||||||||||| |||||||||||||||| ||  ||  || |||| |||||||||||||||    
T  11325332 aaggttgtcaaaattgggatcttgcttcacgtcaaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaatttcaagggttttactcaactact 11325233  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    | ||||  || ||||| ||||| ||||||||  |||||||||||| |||||||||||    
T  11325232 tctgtaaaattgatat-agaaattgtaaaattacaatcaaaatcgatggattttacc 11325177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 17811702 - 17811546
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | | ||| ||||| || ||||| ||| |||||||| |  | ||||||||||| ||| || || ||| ||||||||||||  |||    
T  17811702 aaggttgtcaaaatcgggactttacttcaggtcaaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaagattttactcaaggact 17811603  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||| |||||||||  ||| |||||||||||||||||||||| |||||||||||    
T  17811602 tttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatggattttacc 17811546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 136 - 258
Target Start/End: Original strand, 7730167 - 7730290
Alignment:
Q  136 aaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcg 235  Q
    ||||||||||||||||||   |||||||||||||| ||  || || ||| | |||||||||||||||||||||  || ||||||||||| ||||||||||    
T  7730167 aaaagagaagagcaaaatcatcaatcgtaaaatcgcaaccaaaatcgaatggttttactcaactacttttgtataattgatataagaaattgtaaaatcg 7730266  T
Q  236 caatcaaaatcg-tggattttacc 258  Q
    |||||||||| | |||||||||||    
T  7730267 caatcaaaattgatggattttacc 7730290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 355 - 458
Target Start/End: Complemental strand, 30294275 - 30294175
Alignment:
Q  355 gattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaa 454  Q
    ||||||| |||||||| |||| | |||||||||||||||   ||||||||| ||| ||| |||| |||||||||||| ||||||||||||||||||||||    
T  30294275 gattttgcctattttgagattttgctatggatttgagtc---gaaggtgaataaaatcacaaaatcctggattttaggatttaagttgggattttgacaa 30294179  T
Q  455 caat 458  Q
    ||||    
T  30294178 caat 30294175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 325 - 449
Target Start/End: Complemental strand, 11325111 - 11324988
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||| |||||||||||||  ||| |||||| ||||||| | |||||| |||||||||||||| ||||||||||||||| ||  |||| | ||     
T  11325111 gaaatcgtaaattcgcaatcaaaatt-atgaattttgcctattttagaattctattatggatttgagtcgttgaaggtgaagaaaatcccaaaatcatga 11325013  T
Q  425 attttagaatttaagttgggatttt 449  Q
    ||||||| |||||||| ||||||||    
T  11325012 attttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 11326637 - 11326493
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||||||| |||  |||| ||| |||||||| |||||||| |  | || |||||||  ||| || ||||||| |||||||||||  |||    
T  11326637 aaggttgtcaaaatcagaactttatttcaggtggaaagagaatagcaaaattgggactcttaaaatcacaatcaaaattgaagtattttactcaaggact 11326538  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||| | ||| ||||| |||| ||||||||||||||||||||||    
T  11326537 tttgtggaatcaatataggaaattgtaaaatcgcaatcaaaatcg 11326493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 325 - 452
Target Start/End: Original strand, 20570881 - 20571002
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||  ||      || |||||||||||| |||| | |||    
T  20570881 gaaatcgtaaaattgcaatcaaaatcgatggattttgtctatttttagattctactatagatttaggt------agatgaagaaagtcacaaaatcttgg 20570974  T
Q  425 attttagaatttaagttgggattttgac 452  Q
    |||| ||||||||||| |||| ||||||    
T  20570975 atttcagaatttaagtcgggagtttgac 20571002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 27509256 - 27509323
Alignment:
Q  172 aattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaat 239  Q
    |||||| ||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||    
T  27509256 aattaaaattgaaggattttactcaactacttttatagaatcgatataagaaattgtaaaatcgcaat 27509323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 325 - 403
Target Start/End: Complemental strand, 1977785 - 1977707
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtg 403  Q
    |||||| ||||||||||||||||||||| | ||||||  |||||| ||||||||||||||||||||||| |||||||||    
T  1977785 gaaatcctaaaatcgcaatcaaaatcgacgaattttgcatattttaggattctactatggatttgagtcgttgaaggtg 1977707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 8329874 - 8329975
Alignment:
Q  158 aatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatc-gtggatttta 256  Q
    ||||||||||||| ||| || ||  ||||||||||||||||||||||||||| || |||||||||||  ||||||| ||||||||||||  |||||||||    
T  8329874 aatcgtaaaatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaattgcaatcaaaatcaatggatttta 8329973  T
Q  257 cc 258  Q
    ||    
T  8329974 cc 8329975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 106 - 246
Target Start/End: Original strand, 8346244 - 8346384
Alignment:
Q  106 gttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactactttt 205  Q
    ||||| |||||||| ||||| ||||  ||  |||||||||| |||||| ||||||||||| |  | ||  || || ||||||||||||||||||||||||    
T  8346244 gttgttaaaatcaggattttacttccggtcgaaagagaagaacaaaattgacaatcgtaagaatgcaaacaaaatcgaaggattttactcaactactttt 8346343  T
Q  206 gtagcatcgatataagaaactgtaaaatcgcaatcaaaatc 246  Q
     ||| || |||||||||||  |||| |||||||||||||||    
T  8346344 atagaattgatataagaaatcgtaatatcgcaatcaaaatc 8346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 24725327 - 24725403
Alignment:
Q  183 aaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    |||||||||||||||  |||||||||| ||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  24725327 aaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 24725403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 44944677 - 44944764
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||| |||||| || |||  |||||||| ||  |||||||||| |||||||||||||| ||||||||||||||||||||||    
T  44944677 tcgtaaaatcgcaattaaaatcgaacaattttacttaaggacttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcg 44944764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 137 - 258
Target Start/End: Original strand, 21846256 - 21846378
Alignment:
Q  137 aaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgc 236  Q
    |||||| ||||||||||  | |||| |||||||| ||  || || ||||||||||| |||||||||||| ||| ||||||||||||||  |||||||| |    
T  21846256 aaagaggagagcaaaatcaaaaatcctaaaatcgcaaccaaaatcgaaggattttaatcaactacttttatagaatcgatataagaaatcgtaaaatcac 21846355  T
Q  237 aatcaaaatcg-tggattttacc 258  Q
    ||||||||| | |||||||||||    
T  21846356 aatcaaaattgatggattttacc 21846378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 325 - 438
Target Start/End: Original strand, 27509939 - 27510052
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||   |||||||||| ||||||| || ||| | ||||||||| ||  |||| |||      
T  27509939 gaaatcgtaaaatcgcaatcaaaattgatgaattttgcctatttttaaattctactatagatttgaatcgttggatgtgaagaaaatcgcaaaatccttt 27510038  T
Q  425 attttagaatttaa 438  Q
    ||||||||||||||    
T  27510039 attttagaatttaa 27510052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 20570720 - 20570804
Alignment:
Q  163 taaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||||||| ||| || |||||| ||||||||||||  |||||||||| |||||||||||||| | ||||||| ||||||||||||    
T  20570720 taaaatcgcaatcaaaattgaaagattttactcaaggacttttgtagaatcgatataagaaattataaaatcacaatcaaaatcg 20570804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 5715582 - 5715495
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||| ||| || || || |||||||||||||  |||||||||| ||||||||| |||| | ||||||||||||||||||||    
T  5715582 tcgtaaaatcgcaatcaaaatcgagggattttactcaaggacttttgtagaatcgatataggaaattataaaatcgcaatcaaaatcg 5715495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 258
Target Start/End: Complemental strand, 4247630 - 4247554
Alignment:
Q  183 aaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    |||||||||||||||  | |||||||| ||||||||||||||   |||||||||||||||||||| |||||||||||    
T  4247630 aaggattttactcaaggatttttgtagaatcgatataagaaatcataaaatcgcaatcaaaatcgatggattttacc 4247554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 247
Target Start/End: Original strand, 26617252 - 26617396
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||  ||||||||||||| || ||| || ||  ||||||  | |||||| ||||||| || |||  |  ||||||||| ||||| || |    
T  26617252 aaggttgtcaaaattggaattttgcttcaggtcaaatgataattgcaaaaccgccaatcgaaaaatcgcaactaaattcaaaggattttgctcaattatt 26617351  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||| |  ||||||| ||| ||||||||||||||||||||||    
T  26617352 tttgtagaaaggatataaaaaattgtaaaatcgcaatcaaaatcg 26617396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 24989606 - 24989704
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||||| | ||| || || ||||||||||||| ||  |||||||||| ||||||||| |||| | |||||||||||||||||||| |||||||||||    
T  24989606 tcgtaaaatggcaatcaaaatcgaaggattttact-aaggacttttgtagaatcgatataggaaattataaaatcgcaatcaaaatcgatggattttacc 24989704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 258
Target Start/End: Original strand, 8346361 - 8346462
Alignment:
Q  158 aatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatc-gtggatttta 256  Q
    |||||||| |||| ||| || ||  ||||||||||||||||||||||||||| || |||||||||||   ||||||| |||||| ||||  |||||||||    
T  8346361 aatcgtaatatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcataaaatctcaatcataatcaatggatttta 8346460  T
Q  257 cc 258  Q
    ||    
T  8346461 cc 8346462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 247
Target Start/End: Complemental strand, 5058882 - 5058739
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||| | | ||| |||||  | ||||| ||| |||||||| |  | ||||||||| | ||| || || ||||||||||| ||||  | |    
T  5058882 aaggttgtcaaaatcgggactttacttcagatcaaaagggaatagcaaaatcggaattcgtaaaattgcaatcaaaatcgaaggattttaatcaaggaat 5058783  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||| | |||||||||| ||| ||||||||||||||||||||||    
T  5058782 tttgt-gaatcgatataaaaaattgtaaaatcgcaatcaaaatcg 5058739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 6917056 - 6916989
Alignment:
Q  179 attgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||||||||||||||||||  ||  |||||||||||||| | |||||| |||||||||||||    
T  6917056 attgaaggattttactcaactactttcata-aatcgatataagaaattataaaattgcaatcaaaatcg 6916989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 27221711 - 27221624
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||| ||| || || ||||||||||||||    |||||||||| |||||| || |||| |||||||||||||| |||||||    
T  27221711 tcgtaaaatcgcaatcaaaatcgaaggattttactcggagacttttgtagaatcgatgtaggaaattgtaaaatcgcaattaaaatcg 27221624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 6916913 - 6916846
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtca 394  Q
    |||||||||||||||||||||||| |||||||||||  |  |||| | ||||||||||| ||||||||||    
T  6916913 gaaatcgtaaaatcgcaatcaaaaccgatggattttaac--ttttagaattctactatgaatttgagtca 6916846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 17741960 - 17741886
Alignment:
Q  141 agaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcga 215  Q
    |||| |||||||| || ||||||||||| | ||| || |||||||||||||||| |||||||||| ||| |||||    
T  17741960 agaatagcaaaatcgaaaatcgtaaaattgcaatcaaaattgaaggattttacttaactacttttttagaatcga 17741886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 21157523 - 21157584
Alignment:
Q  158 aatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatata 219  Q
    ||||||||||||  ||| || |||||||||||||| |||||||||||||||| ||| |||||    
T  21157523 aatcgtaaaatctcaatcaaaattgaaggattttattcaactacttttgtagaatctatata 21157584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 440
Target Start/End: Original strand, 26617472 - 26617587
Alignment:
Q  329 tcgtaaaatcgcaatcaaaatcgatggattttg--tctattttgggattctac--tatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||||||||| |||||||  | |||||| | |||||||  |||| ||||  ||| ||||||||||| ||||||  |||| ||||     
T  26617472 tcgtaaaatcgcaatcaaaatcgatagattttgcctatattttagaattctactatatgaatttatgtcgttgaaggtgaaaaaagtcgcaaaatcctga 26617571  T
Q  425 attttagaatttaagt 440  Q
    ||||||| ||| ||||    
T  26617572 attttaggattaaagt 26617587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 30294521 - 30294444
Alignment:
Q  182 gaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||||||||| |||||||||| ||| ||||||| ||||||   ||||||| |||||||| ||| |||||||||||    
T  30294521 gaaggattttacttaactacttttatagaatcgataaaagaaatcctaaaatcacaatcaaactcgatggattttacc 30294444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 205
Target Start/End: Original strand, 48621475 - 48621532
Alignment:
Q  148 caaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactactttt 205  Q
    |||||| || ||||||||||||| |||| | |||||| ||||||||||||||||||||    
T  48621475 caaaatcgaaaatcgtaaaatcgcaattgaaattgaaagattttactcaactactttt 48621532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 4247592 - 4247557
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    |||||| |||||||||||||||||||||||||||||    
T  4247592 gaaatcataaaatcgcaatcaaaatcgatggatttt 4247557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 10285678 - 10285745
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcg 170  Q
    ||||||||||||||| | ||||| ||||| ||  ||||||||||| |||||  |||||||||||||||    
T  10285678 aaggttgtcaaaatcgggattttacttcaggtcgaaagagaagagaaaaatcaacaatcgtaaaatcg 10285745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 24725365 - 24725400
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  24725365 gaaattgtaaaatcgcaatcaaaatcgatggatttt 24725400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 17811583 - 17811549
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    |||| ||||||||||||||||||||||||||||||    
T  17811583 aaattgtaaaatcgcaatcaaaatcgatggatttt 17811549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 1977847 - 1977814
Alignment:
Q  327 aatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    |||||||||||||||||||||||||| |||||||    
T  1977847 aatcgtaaaatcgcaatcaaaatcgaaggatttt 1977814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 4575029 - 4574968
Alignment:
Q  158 aatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatata 219  Q
    ||||||||||||| ||| || ||  ||| ||| ||||||||||||||||||| |||||||||    
T  4575029 aatcgtaaaatcgcaatcaaaatcaaagaattctactcaactacttttgtagaatcgatata 4574968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 9685126 - 9685211
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaat 245  Q
    ||||||||||| |||||| || |||||||||||||| |  |||||| ||| |||||| ||  ||| | ||||||| ||||||||||    
T  9685126 tcgtaaaatcgcaattaaaatcgaaggattttactcgaggacttttatagaatcgatttagaaaattttaaaatcacaatcaaaat 9685211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 851 - 888
Target Start/End: Complemental strand, 36071608 - 36071571
Alignment:
Q  851 ttattataaatatgaagagttaatttgaattttcttta 888  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  36071608 ttattataaatatgaagagttaatttgagtttttttta 36071571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 83; Significance: 9e-39; HSPs: 3)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 325 - 459
Target Start/End: Complemental strand, 8576 - 8442
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||||||||||| || ||||| |||| ||||||||||||||||||  |||| | |||    
T  8576 gaaatcgtaaaatcgcaatcaaaatcaatggattttgcttattttgggattctacaatagatttaagtcgttgaaggtgaagaaagtcgcaaaatcgtgg 8477  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||||| ||||||||||||||||||    
T  8476 attttaggatttaagtagggattttgacaacaatg 8442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 8738 - 8639
Alignment:
Q  160 tcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    ||||||||||| ||| || ||||||||||||||||||| || ||| |||| ||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  8738 tcgtaaaatcgcaatcaaaattgaaggattttactcaagtattttcgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 8639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #3
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 8677 - 8642
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  8677 gaaattgtaaaatcgcaatcaaaatcgatggatttt 8642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 74; Significance: 2e-33; HSPs: 3)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 107 - 258
Target Start/End: Original strand, 93483 - 93636
Alignment:
Q  107 ttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaa-tcgtaaaatcgtaattaagattgaaggattttactcaactactttt 205  Q
    |||||||||| ||  |||||||||| || |||||| ||||||||||| ||||| | ||||||||||||| || || ||||||||||| ||||||||||||    
T  93483 ttgtcaaaattagggttttgcttcaggttaaaagaaaagagcaaaatcgacaaattgtaaaatcgtaatcaaaatcgaaggattttattcaactactttt 93582  T
Q  206 gtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    |||| |||||||||| |||  ||||||||||||||||||||| |||||||||||    
T  93583 gtagaatcgatataataaatcgtaaaatcgcaatcaaaatcgatggattttacc 93636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 93702 - 93834
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| | ||||| ||||||||||||||  |||| |||||||||| ||  ||||  ||||    
T  93702 gaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaattcttctatggatttgagttgttgagggtgaagaaaatc--aaaattctgg 93799  T
Q  425 attttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||| |||||||| ||||||||||||||||||    
T  93800 attttaggatttaagtcgggattttgacaacaatg 93834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 93599 - 93633
Alignment:
Q  326 aaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    |||||||||||||||||||||||||||||||||||    
T  93599 aaatcgtaaaatcgcaatcaaaatcgatggatttt 93633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 72; Significance: 3e-32; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 325 - 460
Target Start/End: Original strand, 7451 - 7586
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctgg 424  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||| ||||||||||||||||||   || |||||||| |||||||||  |||| ||||     
T  7451 gaaatcgtaaaatcgcaattaaaatcgatgaattttgcctattttaggattctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctga 7550  T
Q  425 attttagaatttaagttgggattttgacaacaatgg 460  Q
    |||||||||||||||| |||||| | ||||||||||    
T  7551 attttagaatttaagtcgggattctaacaacaatgg 7586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 7289 - 7374
Alignment:
Q  162 gtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||||| || || |||||||||||||||| ||||||||| | || |||||| |||| |||| |||||||||||||||||    
T  7289 gtaaaatcgtaatcaaaatcgaaggattttactcaagtacttttgttgaatagatataggaaattgtataatcgcaatcaaaatcg 7374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 68; Significance: 8e-30; HSPs: 3)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 144 - 258
Target Start/End: Original strand, 8775 - 8890
Alignment:
Q  144 agagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaa 243  Q
    |||||||||| || |||| |||||||||||| || || |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||||||    
T  8775 agagcaaaatcgaaaatcataaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatagatataagaacttgtaaaatcgcaatcaaa 8874  T
Q  244 atcg-tggattttacc 258  Q
    |||| |||||||||||    
T  8875 atcgatggattttacc 8890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 358 - 459
Target Start/End: Original strand, 9049 - 9150
Alignment:
Q  358 tttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaa 457  Q
    |||| ||||||  ||||| | ||||||||||||||| ||||||||||| ||| ||| |||| |||  |||||| ||||||| |  |||||||||||||||    
T  9049 tttgcctatttaaggattttgctatggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaacaa 9148  T
Q  458 tg 459  Q
    ||    
T  9149 tg 9150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #3
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 331 - 360
Target Start/End: Original strand, 8858 - 8887
Alignment:
Q  331 gtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||||||||||||||||||||||||||||    
T  8858 gtaaaatcgcaatcaaaatcgatggatttt 8887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 68; Significance: 8e-30; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 103 - 242
Target Start/End: Complemental strand, 1024 - 885
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    |||||| | |||||||| ||||||||||| || ||||| |||||||||||| || ||||||||||| | ||| || || |||| ||||||||||||||||    
T  1024 aaggtttttaaaatcaggattttgcttcaggtcaaaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactact 925  T
Q  203 tttgtagcatcgatataagaaactgtaaaatcgcaatcaa 242  Q
    ||||||| |  ||||||||||| |||||||||||||||||    
T  924 tttgtagaacagatataagaaattgtaaaatcgcaatcaa 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 65; Significance: 5e-28; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 16 - 131
Alignment:
Q  140 gagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaat 239  Q
    |||||||||||||| |||||||||||||||| ||  || || |||||||||||||||||||| ||||||| |||||||||||||| ||||||||| ||||    
T  16 gagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttactcaactac-tttgtagaatcgatataagaaattgtaaaatctcaat 114  T
Q  240 caaaatcg-tggatttt 255  Q
    |||||||| ||||||||    
T  115 caaaatcgatggatttt 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 325 - 459
Target Start/End: Original strand, 96 - 231
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt-gtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctg 423  Q
    ||||| |||||||| ||||||||||||||||||||| | ||||||| | ||| ||||||||||||||||| ||||| ||||||||||||  |||| ||||    
T  96 gaaattgtaaaatctcaatcaaaatcgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaatcctg 195  T
Q  424 gattttagaatttaagttgggattttgacaacaatg 459  Q
     ||||||| |||||||| ||||| ||  ||||||||    
T  196 cattttaggatttaagtcgggatcttatcaacaatg 231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 54; Significance: 2e-21; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 102 - 247
Target Start/End: Original strand, 61088 - 61233
Alignment:
Q  102 aaaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactac 201  Q
    |||||||| ||||||| | ||||||||||| || ||||||||| || |||||  | ||||||||||||  ||| || || |||| |||||||| ||||||    
T  61088 aaaggttgccaaaatcgggattttgcttcaggtcaaaagagaaaagtaaaatttaaaatcgtaaaatcacaatcaaaatcgaagaattttacttaactac 61187  T
Q  202 ttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    |||||||| ||||||||| ||||  ||||||||| || ||||||||    
T  61188 ttttgtagaatcgatatatgaaatcgtaaaatcgtaaccaaaatcg 61233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 48516 - 48581
Alignment:
Q  182 gaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg 247  Q
    ||||||||||||| |||||||||||||| ||||||| |||||   |||||||||| ||||||||||    
T  48516 gaaggattttacttaactacttttgtagaatcgataaaagaagtcgtaaaatcgcgatcaaaatcg 48581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 366 - 459
Target Start/End: Original strand, 48825 - 48918
Alignment:
Q  366 ttttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaatg 459  Q
    ||||||||||||  |||||||||||||| ||||||||||| |||||   ||||  || |||||||| |||||||| || ||||| |||||||||    
T  48825 ttttgggattctcatatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaacaatg 48918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 53; Significance: 7e-21; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 163 - 258
Target Start/End: Original strand, 56260 - 56356
Alignment:
Q  163 taaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataagaaactgtaaaatcgcaatcaaaatcg-tggattttacc 258  Q
    |||||||| ||| || || ||||||||||||||||  |||||||||| ||||||||| |||| |||||||||||||||||||||| |||||||||||    
T  56260 taaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 56356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 56318 - 56353
Alignment:
Q  325 gaaatcgtaaaatcgcaatcaaaatcgatggatttt 360  Q
    ||||| ||||||||||||||||||||||||||||||    
T  56318 gaaattgtaaaatcgcaatcaaaatcgatggatttt 56353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 222
Target Start/End: Complemental strand, 145942 - 145823
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactact 202  Q
    ||||||||||||||    ||||||||||| ||  ||||| || ||  |||| || ||||||||||| | ||| || || |||||||||||||||  ||||    
T  145942 aaggttgtcaaaattgagattttgcttcaggtcgaaagaaaatagttaaatcgaaaatcgtaaaatagcaatcaaaatcgaaggattttactcacttact 145843  T
Q  203 tttgtagcatcgatataaga 222  Q
    ||||||| ||||||||||||    
T  145842 tttgtagaatcgatataaga 145823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 459
Target Start/End: Original strand, 37191 - 37296
Alignment:
Q  354 ggattttgtctattttgggattctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgaca 453  Q
    |||||||  |||||||  |||||| ||||||||||||||  ||||||||||| ||| |   ||||  ||| |||||| ||||||||| || |||||||||    
T  37191 ggattttacctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgaca 37290  T
Q  454 acaatg 459  Q
    ||||||    
T  37291 acaatg 37296  T

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Target: scaffold0150 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 33246 - 33143
Alignment:
Q  149 aaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatataaga-----aactgtaaaatcgcaatcaaa 243  Q
    ||||| || ||| ||||||||| ||| || || |||| ||||||||||  ||||||||||| ||||||||||||     || | ||||||||||||||||    
T  33246 aaaatcgaaaattgtaaaatcgcaatcaaaatcgaagaattttactcacttacttttgtagaatcgatataagatagcgaaatctaaaatcgcaatcaaa 33147  T
Q  244 atcg 247  Q
    ||||    
T  33146 atcg 33143  T

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Target: scaffold2084 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 182 - 88
Alignment:
Q  103 aaggttgtcaaaatcagaattttgcttcaagtgaaaagagaagagcaaaatagacaatcgtaaaatcgtaattaagattgaaggattttactcaa 197  Q
    |||||| |||||||| | | ||| |||||||| ||||| ||  |||||||| |  | ||||||||| |||||||| || ||||||||||||||||    
T  182 aaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgggactcgtaaaattgtaattaaaatcgaaggattttactcaa 88  T

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Target: scaffold0115 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 373 - 458
Target Start/End: Original strand, 35103 - 35188
Alignment:
Q  373 attctactatggatttgagtcattgaaggtgaagaaagtcataaaaacctggattttagaatttaagttgggattttgacaacaat 458  Q
    ||||||| ||| ||||||||| || |||||||| |||||   ||||   || |||||||||||||||| | |||||||||||||||    
T  35103 attctacaatgaatttgagtcgttaaaggtgaataaagttccaaaattatgaattttagaatttaagtcgagattttgacaacaat 35188  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 142928 - 142867
Alignment:
Q  158 aatcgtaaaatcgtaattaagattgaaggattttactcaactacttttgtagcatcgatata 219  Q
    |||| |||||||| |||||| |||||||||||||||||||  | |||||||| || ||||||    
T  142928 aatcctaaaatcgcaattaaaattgaaggattttactcaaggagttttgtagaatagatata 142867  T

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