View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1732-Insertion-29 (Length: 157)
Name: NF1732-Insertion-29
Description: NF1732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1732-Insertion-29 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 106; Significance: 2e-53; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 106; E-Value: 2e-53
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 32326043 - 32325894
Alignment:
| Q |
8 |
ctcaaggcattagttatgccaaacttgctgatcttcctcctctcattggcctttgtaagtcattcttatcattacattacatgcattcttaattacttcg |
107 |
Q |
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| T |
32326043 |
ctcaaggcattagttatgccaaacttgctaatcttcctcctctcattggcctttgtaagtcattcttattattacattacattcattcttaattacttcg |
32325944 |
T |
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| Q |
108 |
gnnnnnnnncttctgcgcgcaatggcagagattatcacttcaatttttca |
157 |
Q |
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| T |
32325943 |
gttttttttcttcttcgcgcaattgcagagattatcacttcaatttttca |
32325894 |
T |
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Target: chr1 (Bit Score: 28; Significance: 0.0000008; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 28; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 35
Target Start/End: Original strand, 31744645 - 31744672
Alignment:
| Q |
8 |
ctcaaggcattagttatgccaaacttgc |
35 |
Q |
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| T |
31744645 |
ctcaaggcattagttatgccaaacttgc |
31744672 |
T |
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