View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1732-Insertion-3 (Length: 1095)

Name: NF1732-Insertion-3
Description: NF1732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1732-Insertion-3
NF1732-Insertion-3
[»] chr1 (40 HSPs)
chr1 (158-636)||(2601823-2602296)
chr1 (702-1021)||(2601510-2601826)
chr1 (8-62)||(2602312-2602366)
chr1 (87-151)||(13538402-13538468)
chr1 (554-690)||(4680408-4680544)
chr1 (89-147)||(11215053-11215113)
chr1 (89-151)||(23991223-23991286)
chr1 (89-150)||(8984464-8984526)
chr1 (89-145)||(18467156-18467214)
chr1 (89-145)||(45333670-45333728)
chr1 (89-133)||(15390287-15390332)
chr1 (89-126)||(38851991-38852028)
chr1 (89-148)||(1247306-1247366)
chr1 (89-133)||(7491828-7491872)
chr1 (101-148)||(12181985-12182033)
chr1 (89-151)||(22563434-22563498)
chr1 (101-151)||(7000933-7000984)
chr1 (101-147)||(23545425-23545472)
chr1 (89-151)||(31124597-31124660)
chr1 (101-151)||(34562758-34562809)
chr1 (89-150)||(39346937-39347000)
chr1 (89-150)||(43884843-43884906)
chr1 (101-147)||(47469044-47469091)
chr1 (90-133)||(50119039-50119082)
chr1 (89-151)||(52426872-52426935)
chr1 (972-1021)||(2601418-2601468)
chr1 (89-145)||(7166185-7166243)
chr1 (89-145)||(19011409-19011467)
chr1 (102-151)||(19564125-19564175)
chr1 (89-150)||(29204694-29204756)
chr1 (102-151)||(45416150-45416200)
chr1 (89-145)||(51050244-51050302)
chr1 (89-137)||(3560339-3560388)
chr1 (89-133)||(8865921-8865966)
chr1 (101-145)||(11860096-11860141)
chr1 (104-133)||(16661320-16661349)
chr1 (101-145)||(39670800-39670845)
chr1 (89-145)||(41620433-41620490)
chr1 (89-133)||(45517226-45517271)
chr1 (88-151)||(47642939-47643004)
[»] chr7 (24 HSPs)
chr7 (89-133)||(7778955-7778999)
chr7 (89-151)||(19752926-19752990)
chr7 (89-151)||(48119518-48119582)
chr7 (89-151)||(27424887-27424950)
chr7 (89-150)||(48719848-48719911)
chr7 (89-145)||(12935794-12935851)
chr7 (89-151)||(30388465-30388529)
chr7 (89-137)||(47194383-47194431)
chr7 (89-132)||(7836895-7836938)
chr7 (89-150)||(12640547-12640610)
chr7 (89-128)||(27159750-27159789)
chr7 (89-132)||(38151412-38151455)
chr7 (89-146)||(12364802-12364860)
chr7 (77-151)||(5804903-5804977)
chr7 (101-134)||(6252145-6252178)
chr7 (89-133)||(19331458-19331503)
chr7 (89-130)||(21576929-21576970)
chr7 (101-145)||(25155595-25155640)
chr7 (76-143)||(29625976-29626042)
chr7 (89-137)||(32856875-32856924)
chr7 (101-137)||(38889463-38889500)
chr7 (110-151)||(40200765-40200806)
chr7 (99-144)||(44831591-44831636)
chr7 (92-133)||(47438001-47438042)
[»] chr4 (32 HSPs)
chr4 (89-150)||(46582683-46582746)
chr4 (89-151)||(49264574-49264637)
chr4 (101-151)||(5165905-5165956)
chr4 (89-151)||(31852397-31852460)
chr4 (89-151)||(42002354-42002417)
chr4 (89-146)||(48744260-48744319)
chr4 (89-151)||(51890845-51890908)
chr4 (101-151)||(55055964-55056015)
chr4 (100-145)||(6170939-6170985)
chr4 (89-145)||(25235755-25235813)
chr4 (89-145)||(48569134-48569192)
chr4 (89-133)||(45849114-45849159)
chr4 (87-145)||(194633-194693)
chr4 (101-147)||(4590298-4590346)
chr4 (89-151)||(5304968-5305032)
chr4 (89-151)||(22788632-22788696)
chr4 (101-133)||(42081802-42081834)
chr4 (89-133)||(42664048-42664092)
chr4 (101-147)||(45126184-45126232)
chr4 (89-151)||(47934030-47934094)
chr4 (89-151)||(23924831-23924894)
chr4 (89-151)||(40486489-40486552)
chr4 (105-151)||(41897522-41897569)
chr4 (89-151)||(43480998-43481061)
chr4 (92-145)||(2629633-2629687)
chr4 (89-145)||(3763966-3764024)
chr4 (77-133)||(15603988-15604043)
chr4 (89-145)||(39023229-39023287)
chr4 (89-133)||(3847748-3847793)
chr4 (92-147)||(29356328-29356385)
chr4 (89-145)||(43905764-43905821)
chr4 (101-145)||(51791307-51791352)
[»] scaffold0068 (1 HSPs)
scaffold0068 (89-137)||(45973-46022)
[»] chr5 (26 HSPs)
chr5 (89-137)||(32423628-32423677)
chr5 (89-145)||(34208428-34208485)
chr5 (89-145)||(35241450-35241507)
chr5 (89-133)||(17064817-17064861)
chr5 (101-151)||(37553896-37553947)
chr5 (91-133)||(831656-831698)
chr5 (620-690)||(17135684-17135753)
chr5 (101-148)||(4068033-4068081)
chr5 (89-144)||(21749336-21749392)
chr5 (101-148)||(37684517-37684565)
chr5 (101-151)||(7171776-7171827)
chr5 (89-147)||(14804941-14805000)
chr5 (101-151)||(20145535-20145586)
chr5 (89-144)||(36735926-36735984)
chr5 (89-150)||(41179761-41179824)
chr5 (89-145)||(29154896-29154954)
chr5 (89-127)||(40276401-40276439)
chr5 (89-137)||(2363033-2363082)
chr5 (89-145)||(8571847-8571904)
chr5 (89-137)||(11188640-11188689)
chr5 (89-145)||(23292376-23292433)
chr5 (101-145)||(24477879-24477924)
chr5 (89-137)||(25648042-25648091)
chr5 (90-145)||(25729399-25729456)
chr5 (104-133)||(28906873-28906902)
chr5 (104-133)||(28943268-28943297)
[»] chr3 (34 HSPs)
chr3 (89-145)||(44764774-44764831)
chr3 (89-151)||(17608277-17608341)
chr3 (89-151)||(24303438-24303501)
chr3 (89-151)||(44764528-44764591)
chr3 (89-145)||(6488178-6488236)
chr3 (89-145)||(22501889-22501947)
chr3 (89-135)||(25716011-25716057)
chr3 (95-133)||(40192223-40192261)
chr3 (76-151)||(47098780-47098855)
chr3 (89-145)||(4541952-4542009)
chr3 (89-145)||(5173969-5174026)
chr3 (92-147)||(39966035-39966092)
chr3 (89-133)||(53752658-53752703)
chr3 (77-150)||(33225296-33225369)
chr3 (89-133)||(41411586-41411630)
chr3 (89-137)||(44685127-44685175)
chr3 (101-151)||(19222557-19222608)
chr3 (101-151)||(47098564-47098615)
chr3 (101-147)||(53203876-53203923)
chr3 (77-145)||(53347238-53347306)
chr3 (101-145)||(13638215-13638261)
chr3 (89-145)||(30779525-30779583)
chr3 (89-145)||(33606898-33606956)
chr3 (89-145)||(34757570-34757628)
chr3 (110-144)||(39709094-39709128)
chr3 (94-151)||(43280116-43280174)
chr3 (89-145)||(52309071-52309126)
chr3 (89-133)||(17218555-17218600)
chr3 (89-144)||(19550561-19550618)
chr3 (89-145)||(34579416-34579473)
chr3 (89-145)||(38819282-38819339)
chr3 (89-137)||(40910138-40910187)
chr3 (92-133)||(49375643-49375684)
chr3 (89-137)||(52410199-52410248)
[»] chr2 (18 HSPs)
chr2 (77-137)||(15233476-15233534)
chr2 (89-151)||(5521178-5521242)
chr2 (89-151)||(3287015-3287078)
chr2 (101-145)||(21438889-21438934)
chr2 (89-137)||(41566825-41566874)
chr2 (88-150)||(39408647-39408711)
chr2 (91-145)||(19684127-19684182)
chr2 (89-151)||(20919658-20919721)
chr2 (92-145)||(28692446-28692501)
chr2 (89-150)||(33233170-33233233)
chr2 (92-133)||(2305138-2305180)
chr2 (89-145)||(18694839-18694897)
chr2 (89-145)||(29772236-29772294)
chr2 (101-145)||(1027604-1027649)
chr2 (101-145)||(3596304-3596349)
chr2 (101-137)||(31223683-31223720)
chr2 (77-151)||(34355769-34355843)
chr2 (89-150)||(44822472-44822536)
[»] chr8 (24 HSPs)
chr8 (89-151)||(38283172-38283235)
chr8 (89-145)||(16449179-16449237)
chr8 (89-148)||(9407441-9407502)
chr8 (91-151)||(12770416-12770477)
chr8 (89-145)||(41865041-41865098)
chr8 (89-151)||(8034370-8034434)
chr8 (89-151)||(26022295-26022359)
chr8 (89-133)||(43847002-43847046)
chr8 (101-151)||(481059-481110)
chr8 (89-151)||(24458365-24458428)
chr8 (89-145)||(8265322-8265380)
chr8 (89-145)||(13647415-13647473)
chr8 (89-145)||(13747840-13747898)
chr8 (89-150)||(17027839-17027901)
chr8 (89-150)||(17558275-17558337)
chr8 (89-150)||(22274570-22274632)
chr8 (89-145)||(33604136-33604194)
chr8 (89-145)||(38344103-38344161)
chr8 (89-145)||(39169539-39169597)
chr8 (90-151)||(4654068-4654132)
chr8 (89-133)||(23858264-23858309)
chr8 (101-145)||(25812180-25812225)
chr8 (89-145)||(25824861-25824918)
chr8 (89-145)||(44444598-44444655)
[»] chr6 (16 HSPs)
chr6 (88-145)||(6210108-6210167)
chr6 (89-145)||(3795732-3795790)
chr6 (77-133)||(7865303-7865358)
chr6 (89-145)||(15963901-15963959)
chr6 (89-137)||(26347467-26347516)
chr6 (89-151)||(30264-30328)
chr6 (89-151)||(3640562-3640626)
chr6 (89-151)||(14708978-14709042)
chr6 (89-125)||(17534922-17534958)
chr6 (92-151)||(24319061-24319121)
chr6 (91-145)||(1435863-1435918)
chr6 (77-145)||(10913027-10913095)
chr6 (89-150)||(10934648-10934711)
chr6 (89-145)||(9372159-9372217)
chr6 (89-150)||(9704466-9704528)
chr6 (89-133)||(32166436-32166481)
[»] scaffold0445 (1 HSPs)
scaffold0445 (89-145)||(3972-4030)
[»] scaffold0246 (1 HSPs)
scaffold0246 (89-151)||(24428-24491)
[»] scaffold0154 (1 HSPs)
scaffold0154 (101-151)||(28792-28843)
[»] scaffold0085 (1 HSPs)
scaffold0085 (89-133)||(27888-27933)


Alignment Details
Target: chr1 (Bit Score: 435; Significance: 0; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 158 - 636
Target Start/End: Complemental strand, 2602296 - 2601823
Alignment:
Q  158 gataaaaagaagcttctgcattaaattggaaatcgccacaatttgttttagaataaatatctaaattgaaacaggaaatttggctgcataattatattga 257  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     ||    
T  2602296 gataaaaagaagcttctgcattaaattggaaatcgccacaatttattttagaataaatatctaaattgaaacaggaaatttggctgcataatt-----ga 2602202  T
Q  258 tgtcaaaatgaaactgtttgggaaagtatcaagtcattagcaatcaatttccatcaagccgtgaaaattgaatcaggaagttcaatcaccttaacagata 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2602201 tgtcaaaatgaaactgtttgggaaagtatcaagtcattagcaatcaatttccatcaagccgtgaaaattgaatcaggaagttcaatcaccttaacagata 2602102  T
Q  358 gggttaagcaaattgctgctgaaaagttgacttattaattacaggtagaatagatagttcagctgatgcctatgaataaaatctgtcacatccgcaaggt 457  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2602101 gggttaagcaaattgctgctgaaaagttgacttattaattacaggtagaatagatagttcagttgatgcctatgaataaaatctgtcacatccgcaaggt 2602002  T
Q  458 gggtaagcttgggcgcaagataactttggaaaatctttggagactaacagatagaacttttagggtaagagttgctgcttttgagtaagattctaggatt 557  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2602001 gggtaagcttgggcgcaagataactttggaaaatctttggagactaaaagatagaactcttagggtaagagttgctgcttttgagtaagattctaggatt 2601902  T
Q  558 ggaaaacacattgtaaacatcttgaatatcaattatcattgagtgagttgagagagaaaaggagagaaatagagaattg 636  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2601901 ggaaaacacatggtaaacatcttgaatatcaattatcattgagtgagttgagagagaaaaggagagaaattgagaattg 2601823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 702 - 1021
Target Start/End: Complemental strand, 2601826 - 2601510
Alignment:
Q  702 attgtaaaaatgatatagattagaatttgttcttggagaattttataagtttatatctcataccttttttgtatcttctgtaaacacttaatcatagtag 801  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  2601826 attgtaaaaatgatagagattagaatttgttcttggagaattttataagtttatatctcatac-ttttttgtatcttttgtaaacacttattcatagtag 2601728  T
Q  802 atcagaaaattgttctctcccttatacgtatgtcattattggcctaggtcttgagtattagttaattctatcggacctgagatctttgcatggttgtgtt 901  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  2601727 atcaagaaattgttctctcccttatacgtatgtcattattggcctaggtcttgagtattagttaattatgtcggacctgagacctttgcatggttgtgtt 2601628  T
Q  902 gaatagcctttgtcagcggtcttcttcttagatagagggggtggtatctgc-atgacactccaatgcttcagaaaatatcatcaagaagaagcttttgaa 1000  Q
    |||||||||||||||  ||||||||||||||||||||||   ||||||||| |||||||||||||||||||| |||||||||||| |||||| |||||||    
T  2601627 gaatagcctttgtcaatggtcttcttcttagatagaggg---ggtatctgcaatgacactccaatgcttcag-aaatatcatcaaaaagaagattttgaa 2601532  T
Q  1001 gcccact-aaaggattccccaa 1021  Q
    ||||||| ||||||||||||||    
T  2601531 gcccactaaaaggattccccaa 2601510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 2602366 - 2602312
Alignment:
Q  8 attttgtggtgaaacgtattgaaattgatgttgtcttttattaatttcaagcaaa 62  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2602366 attttgtggtgaaacgtattgaaattgatgttgtcttttattaatttcaagcaaa 2602312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 13538402 - 13538468
Alignment:
Q  87 tatagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||| | ||||||||||| |||||    
T  13538402 tatagtggctagaactcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccggcc 13538468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 554 - 690
Target Start/End: Complemental strand, 4680544 - 4680408
Alignment:
Q  554 gattggaaaacacattgtaaacatcttgaatatcaattatcattgagtgagttgagagagaaaaggagagaaatagagaattgctcttggtgagcaattg 653  Q
    ||||||||||||| |||||||||  ||| |||   |||| ||||||||| ||| |||||| ||| | ||||||| | | ||||||||| | |||||||||    
T  4680544 gattggaaaacactttgtaaacactttggataatgattaccattgagtgggtttagagaggaaatgggagaaattggggattgctcttagagagcaattg 4680445  T
Q  654 agaagaattttgtggttacttttgtaactctcttgtt 690  Q
     ||| |||||  || | |||||| |||||||||||||    
T  4680444 ggaacaatttcttgataacttttctaactctcttgtt 4680408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 11215113 - 11215053
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacctc 147  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  11215113 tagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaacctc 11215053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 23991223 - 23991286
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  ||||||||||||||||||||||||||| |||| | ||||||||||| |||||    
T  23991223 tagtggctagagctcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccggcc 23991286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 8984464 - 8984526
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctgggttcgaacctcggc 150  Q
    ||||||||||  ||||||||||| ||| |||||||||||||||||| ||||||||||| ||||    
T  8984464 tagtggctagagctcacacaatttaattgtggagaagtggagtgtccgggttcgaaccccggc 8984526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 18467156 - 18467214
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  18467156 tagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaacc 18467214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 45333670 - 45333728
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  45333670 tagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaacc 45333728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 15390332 - 15390287
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtc 133  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||    
T  15390332 tagtggctagaactcacacaattaaattgtggagaagtggagtgtc 15390287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 38851991 - 38852028
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtg 126  Q
    |||||||||| |||||||||||||||||||||||||||    
T  38851991 tagtggctagaactcacacaattaaatgtggagaagtg 38852028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 1247366 - 1247306
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtct-gggttcgaacctcg 148  Q
    ||||||||||  |||| |||||||||||||||||||||  |||||| ||||||||||||||    
T  1247366 tagtggctagagctcaaacaattaaatgtggagaagtgaggtgtctggggttcgaacctcg 1247306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 7491872 - 7491828
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtc 133  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||    
T  7491872 tagtggctagagctcacacaattaaatgtggagaagtggggtgtc 7491828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 12181985 - 12182033
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtctg-ggttcgaacctcg 148  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  12181985 ctcacacaattaaatgtggagaagttgagtgtctgagattcgaacctcg 12182033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 22563498 - 22563434
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||| | ||||||||||| |||||    
T  22563498 tagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccggcc 22563434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 7000933 - 7000984
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtctgg-gttcgaacctcggcc 151  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||| |||||    
T  7000933 ctcacacaattaaatgtggagaagtggggtgtccggagttcgaaccccggcc 7000984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 23545425 - 23545472
Alignment:
Q  101 ctcacacaattaaat-gtggagaagtggagtgtctgggttcgaacctc 147  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  23545425 ctcacacaatttaatcgtggagaagtggggtgtctgggttcgaacctc 23545472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 31124597 - 31124660
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtctgg-gttcgaacctcggcc 151  Q
    ||||||||||  ||||||||||||||||||||||||||| || || || ||||||||| |||||    
T  31124597 tagtggctagagctcacacaattaaatgtggagaagtggggtatccggagttcgaaccccggcc 31124660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 34562758 - 34562809
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||||||| ||||||||||| |||| | |||||||||||||||||    
T  34562758 ctcacacaattaaatatggagaagtggggtgtccggggttcgaacctcggcc 34562809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 39346937 - 39347000
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgt-ctgggttcgaacctcggc 150  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||| | ||||||||||| ||||    
T  39346937 tagtggctagaactcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggc 39347000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 43884906 - 43884843
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgt-ctgggttcgaacctcggc 150  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||| | ||||||||||| ||||    
T  43884906 tagtggctagaactcacacaatttaattgtggagaagtggagtgtccagggttcgaaccccggc 43884843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 47469044 - 47469091
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctc 147  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||||    
T  47469044 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctc 47469091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 133
Target Start/End: Complemental strand, 50119082 - 50119039
Alignment:
Q  90 agtggctagtactcacacaattaaatgtggagaagtggagtgtc 133  Q
    |||||||||  ||||||||||||||||||||||||||| |||||    
T  50119082 agtggctagagctcacacaattaaatgtggagaagtggggtgtc 50119039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 52426872 - 52426935
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtctgg-gttcgaacctcggcc 151  Q
    |||||||||| |||||||  ||||||||||||||| ||| |||||||| ||||||||| |||||    
T  52426872 tagtggctagaactcacatcattaaatgtggagaaatggggtgtctggagttcgaaccacggcc 52426935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 972 - 1021
Target Start/End: Complemental strand, 2601468 - 2601418
Alignment:
Q  972 gaaaatatcatcaagaagaagcttttgaagcccacta-aaggattccccaa 1021  Q
    ||||||||||||||  ||||||||||||||| ||||| |||||||||||||    
T  2601468 gaaaatatcatcaaagagaagcttttgaagctcactagaaggattccccaa 2601418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 7166185 - 7166243
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    ||||||||||  |||||||||||||| |||||||||||||||||| | |||||||||||    
T  7166185 tagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaacc 7166243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 19011467 - 19011409
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  ||||||||||||||| ||||||||||||||| ||| |||||||||||    
T  19011467 tagtggctagagctcacacaattaaattgtggagaagtggagtatctggggttcgaacc 19011409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 19564125 - 19564175
Alignment:
Q  102 tcacacaattaaatgtggagaagtggagtgtctg-ggttcgaacctcggcc 151  Q
    |||||||||||||||||||||||||| ||||| | |||||||||| |||||    
T  19564125 tcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccccggcc 19564175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 29204756 - 29204694
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtctggg-ttcgaacctcggc 150  Q
    ||||||||||   |||||||| ||||||||||||||||| || |||||| |||||||||||||    
T  29204756 tagtggctagagttcacacaactaaatgtggagaagtggggtatctgggattcgaacctcggc 29204694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 45416150 - 45416200
Alignment:
Q  102 tcacacaattaaatgtggagaagtggagtgtctggg-ttcgaacctcggcc 151  Q
    |||||||||||||||||||||||||| ||||| ||| |||||||| |||||    
T  45416150 tcacacaattaaatgtggagaagtggggtgtccgggattcgaaccccggcc 45416200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 51050302 - 51050244
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  ||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  51050302 tagtggctagagctcacacaattaaattgtggagaagtggaatgtctggggttcgaacc 51050244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 3560339 - 3560388
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtctggg 137  Q
    ||||||||||  |||||||||||||| |||||||||||||||| ||||||    
T  3560339 tagtggctagagctcacacaattaaattgtggagaagtggagtatctggg 3560388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 8865966 - 8865921
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtc 133  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||    
T  8865966 tagtggccagaactcacacaattaaattgtggagaagtggagtgtc 8865921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 11860141 - 11860096
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||    
T  11860141 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaacc 11860096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 133
Target Start/End: Complemental strand, 16661349 - 16661320
Alignment:
Q  104 acacaattaaatgtggagaagtggagtgtc 133  Q
    ||||||||||||||||||||||||||||||    
T  16661349 acacaattaaatgtggagaagtggagtgtc 16661320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 39670800 - 39670845
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtctgg-gttcgaacc 145  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||    
T  39670800 ctcacacaattaaatgtggagaagtgggatgtctggagttcgaacc 39670845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 41620490 - 41620433
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtg-tctgggttcgaacc 145  Q
    ||||||||||  ||||||||||||||||||||||||| ||| | || |||||||||||    
T  41620490 tagtggctagagctcacacaattaaatgtggagaagtagagagatcggggttcgaacc 41620433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 45517226 - 45517271
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtc 133  Q
    ||||||||||  |||||||||||||| |||||||||||||||||||    
T  45517226 tagtggctagagctcacacaattaaattgtggagaagtggagtgtc 45517271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 47642939 - 47643004
Alignment:
Q  88 atagtggctagtactcacacaattaaat-gtggagaagtggagtg-tctgggttcgaacctcggcc 151  Q
    |||||||||||  ||||||||||| ||| |||||||||||||||| || ||||||||||| |||||    
T  47642939 atagtggctagagctcacacaatttaattgtggagaagtggagtgttcggggttcgaaccccggcc 47643004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 7778955 - 7778999
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtc 133  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  7778955 tagtggctagaactcacacaattaaatgtggagaagtggagtgtc 7778999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 19752926 - 19752990
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| | ||||||||||| |||||    
T  19752926 tagtggctagaactcacacaattaaattgtggagaagtggagtgtccagggttcgaaccccggcc 19752990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 48119582 - 48119518
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||| | |||||||||||||||||    
T  48119582 tagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaacctcggcc 48119518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 27424950 - 27424887
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtctg-ggttcgaacctcggcc 151  Q
    ||||||||||  |||||||||||||||||||||||||||||| || | |||||||||| |||||    
T  27424950 tagtggctagagctcacacaattaaatgtggagaagtggagtatccgaggttcgaaccccggcc 27424887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 48719911 - 48719848
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacctcggc 150  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  48719911 tagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccggc 48719848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 12935851 - 12935794
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  ||||||||||||||||||||||||||| | |||| |||||||||||    
T  12935851 tagtggctagagctcacacaattaaatgtggagaagtggggcgtctggggttcgaacc 12935794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 30388465 - 30388529
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacctcggcc 151  Q
    ||||||||||  ||||||||||| ||| ||||||||||||||||||| ||||||||||| |||||    
T  30388465 tagtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccggcc 30388529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 47194383 - 47194431
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtctggg 137  Q
    |||||||||| |||||||||||||| ||||||||||||| |||| ||||    
T  47194383 tagtggctagaactcacacaattaattgtggagaagtggggtgtttggg 47194431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 132
Target Start/End: Original strand, 7836895 - 7836938
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt 132  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||    
T  7836895 tagtggctagagctcacacaattaaatgtggagaagtggtgtgt 7836938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 12640547 - 12640610
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacctcggc 150  Q
    ||||||||||  ||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||    
T  12640547 tagtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccggc 12640610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 27159789 - 27159750
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtgga 128  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  27159789 tagtggctagagctcacacaattaaatgtggagaagtgga 27159750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 132
Target Start/End: Complemental strand, 38151455 - 38151412
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt 132  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||    
T  38151455 tagtggctagagctcacacaattaaatgtggagaagtggggtgt 38151412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 12364860 - 12364802
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtctggg-ttcgaacct 146  Q
    ||||||||||  ||||||||  ||||||||||||||||| ||||||||| |||||||||    
T  12364860 tagtggctagagctcacacatataaatgtggagaagtggggtgtctgggattcgaacct 12364802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 5804977 - 5804903
Alignment:
Q  77 tcaagtagcttatagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||||  ||||||||  |||||||||||||| |||||||||||||| | | | |||||||||||||||||    
T  5804977 tcaagtagctta--gtggctagagctcacacaattaaattgtggagaagtggaatatacggggttcgaacctcggcc 5804903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 6252178 - 6252145
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtct 134  Q
    |||||||| |||||||||||||||||||||||||    
T  6252178 ctcacacatttaaatgtggagaagtggagtgtct 6252145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 19331458 - 19331503
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtc 133  Q
    ||||||||||  |||||||||||||| |||||||||||||||||||    
T  19331458 tagtggctagagctcacacaattaaattgtggagaagtggagtgtc 19331503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 21576970 - 21576929
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagt 130  Q
    |||||||| | |||||||||||||||| ||||||||||||||    
T  21576970 tagtggcttgaactcacacaattaaatatggagaagtggagt 21576929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 25155640 - 25155595
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||    
T  25155640 ctcacacaattaaatgtggagaagtggggtgtccagggttcgaacc 25155595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 29626042 - 29625976
Alignment:
Q  76 atcaagtagcttatagtggctagtactcacacaattaaatg-tggagaagtggagtgtctgggttcgaa 143  Q
    ||||||||||  ||| ||||||| ||||||||||||||||  | ||||||||||||||| |||||||||    
T  29626042 atcaagtagc--ataatggctagaactcacacaattaaattatagagaagtggagtgtcggggttcgaa 29625976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 32856875 - 32856924
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctggg 137  Q
    ||||||||||  |||||| |||||||| ||||||||||||||||||||||    
T  32856875 tagtggctagagctcacataattaaattgtggagaagtggagtgtctggg 32856924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 38889463 - 38889500
Alignment:
Q  101 ctcacacaattaaat-gtggagaagtggagtgtctggg 137  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  38889463 ctcacacaattaaattgtggagaagtggagtgtctggg 38889500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 40200806 - 40200765
Alignment:
Q  110 ttaaatgtggagaagtggagtgtctgggttcgaacctcggcc 151  Q
    |||||| ||||||||||||||||| ||||||||||| |||||    
T  40200806 ttaaatatggagaagtggagtgtcggggttcgaaccccggcc 40200765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 44831591 - 44831636
Alignment:
Q  99 tactcacacaattaaatgtggagaagtggagtgtctgggttcgaac 144  Q
    |||||||| |||||||||||||||||||| ||||||  ||||||||    
T  44831591 tactcacataattaaatgtggagaagtggggtgtctatgttcgaac 44831636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 47438042 - 47438001
Alignment:
Q  92 tggctagtactcacacaattaaatgtggagaagtggagtgtc 133  Q
    |||||||  |||||||| ||||||||||||||||||||||||    
T  47438042 tggctagagctcacacagttaaatgtggagaagtggagtgtc 47438001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 46582746 - 46582683
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacctcggc 150  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  46582746 tagtggccagaactcacacaattaaattgtggagaagtggagtgtctggggttcgaacctcggc 46582683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 49264637 - 49264574
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  ||||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  49264637 tagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcggcc 49264574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 5165956 - 5165905
Alignment:
Q  101 ctcacacaattaaat-gtggagaagtggagtgtctgggttcgaacctcggcc 151  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| |||||    
T  5165956 ctcacacaattaaattgtggagaagtggagtgtcggggttcgaaccccggcc 5165905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 31852460 - 31852397
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  ||||||||||||||| ||||||||||| |||| | |||||||||||||||||    
T  31852460 tagtggctagagctcacacaattaaatatggagaagtggggtgtccggggttcgaacctcggcc 31852397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 42002417 - 42002354
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtctg-ggttcgaacctcggcc 151  Q
    ||||||||||  ||||||||||||||||||||||||||| ||||||| ||||| |||| |||||    
T  42002417 tagtggctagagctcacacaattaaatgtggagaagtggggtgtctgaggttcaaaccacggcc 42002354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 48744319 - 48744260
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacct 146  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| | ||||||||||||    
T  48744319 tagtggctagaactcacacaattaaattgtggagaagtggagtgtccagggttcgaacct 48744260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 51890908 - 51890845
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  ||||||||||||||||||||||||||| |||| | ||||||||||| |||||    
T  51890908 tagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcc 51890845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 55056015 - 55055964
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  55056015 ctcacacaattaaatgtggagaagtggcgtgtccggggttcgaacctcggcc 55055964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 6170939 - 6170985
Alignment:
Q  100 actcacacaattaaatgtggagaagtggagtgtctg-ggttcgaacc 145  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  6170939 actcacacaattaaatgtggagaagtagagtgtctgaggttcgaacc 6170985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 25235755 - 25235813
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  25235755 tagtagctagaactcacacaattaaattgtggagaagtggagtgtctggggttcgaacc 25235813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 48569134 - 48569192
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  48569134 tagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaacc 48569192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 45849159 - 45849114
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtc 133  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||    
T  45849159 tagtggctagaactcacacaattaaattgtggagaagtggagtgtc 45849114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 194633 - 194693
Alignment:
Q  87 tatagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    |||||||||||| ||||||||||||||| |||||| ||||||||||| | |||||||||||    
T  194633 tatagtggctagaactcacacaattaaattgtggacaagtggagtgtccggggttcgaacc 194693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 4590346 - 4590298
Alignment:
Q  101 ctcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacctc 147  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  4590346 ctcacacaattaaattgtggagaagtggagtgtctggggttcgaacctc 4590298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 5304968 - 5305032
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  ||||||||||| ||| ||||||||||||||||| | |||||||||||||||||    
T  5304968 tagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaacctcggcc 5305032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 22788632 - 22788696
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtctggg-ttcgaacctcggcc 151  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||| ||| ||| ||||||||||    
T  22788632 tagtggctagtgctcacacaattaaattgtggagaagtggggtgtccgggattcaaacctcggcc 22788696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 133
Target Start/End: Complemental strand, 42081834 - 42081802
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtc 133  Q
    |||||||||||||||||||||||||||||||||    
T  42081834 ctcacacaattaaatgtggagaagtggagtgtc 42081802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 42664092 - 42664048
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtc 133  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||    
T  42664092 tagtggctagagctcacacaattaaatgtggagaagtggggtgtc 42664048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 45126232 - 45126184
Alignment:
Q  101 ctcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacctc 147  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  45126232 ctcacacaattaaattgtggagaagtggagtgtctggggttcgaacctc 45126184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 47934030 - 47934094
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  |||||||||||||| |||||||||||||||||| | ||||||||||| |||||    
T  47934030 tagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccggcc 47934094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 23924831 - 23924894
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  ||||||||| |||||||||||||||| ||||| | ||||||||||| |||||    
T  23924831 tagtggctagagctcacacaaataaatgtggagaagtgaagtgtccggggttcgaaccccggcc 23924894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 40486552 - 40486489
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  |||||||| ||||||||| ||||||||||||| | ||||||||||| |||||    
T  40486552 tagtggctagagctcacacatttaaatgtgaagaagtggagtgtccggggttcgaaccccggcc 40486489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 151
Target Start/End: Original strand, 41897522 - 41897569
Alignment:
Q  105 cacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||||    
T  41897522 cacaattaaatgtggagaagtggggtgtacagggttcgaacctcggcc 41897569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 43480998 - 43481061
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctgggttcgaacctcggcc 151  Q
    ||||||||||   |||||||||| ||| |||||||||||||||||| ||||||||||| |||||    
T  43480998 tagtggctagagttcacacaatttaattgtggagaagtggagtgtccgggttcgaaccccggcc 43481061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 2629687 - 2629633
Alignment:
Q  92 tggctagtactcacacaattaaatgtggagaagtggagtg-tctgggttcgaacc 145  Q
    |||||||  ||||||||||||||||||||||||||| ||| || |||||||||||    
T  2629687 tggctagagctcacacaattaaatgtggagaagtggggtgttcggggttcgaacc 2629633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 3763966 - 3764024
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  |||||||||||||| |||||||||||||||| ||| |||||||||||    
T  3763966 tagtggctagagctcacacaattaaattgtggagaagtggagtatctggggttcgaacc 3764024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 15603988 - 15604043
Alignment:
Q  77 tcaagtagcttatagtggctagtactcacacaattaaat-gtggagaagtggagtgtc 133  Q
    ||||||||||||  |||||||| ||||||| |||||||| ||||||||||||||||||    
T  15603988 tcaagtagctta--gtggctagaactcacataattaaattgtggagaagtggagtgtc 15604043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 39023287 - 39023229
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgt-ctgggttcgaacc 145  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||| | |||||||||||    
T  39023287 tagtggctagaacttacacaattaaattgtggagaagtggagtgtccagggttcgaacc 39023229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 3847793 - 3847748
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtc 133  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||    
T  3847793 tagtggctagaactcacacaatttaattgtggagaagtggagtgtc 3847748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 29356385 - 29356328
Alignment:
Q  92 tggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacctc 147  Q
    ||||||| ||||||||||||||| ||||||||| |||||||| | |||||||||||||    
T  29356385 tggctagaactcacacaattaaattgtggagaaatggagtgtccggggttcgaacctc 29356328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 43905821 - 43905764
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    ||||||||||  |||||||||||||| |||||||||||| |||| | |||||||||||    
T  43905821 tagtggctagagctcacacaattaaacgtggagaagtggggtgtccggggttcgaacc 43905764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 51791352 - 51791307
Alignment:
Q  101 ctcacacaattaaat-gtggagaagtggagtgtctgggttcgaacc 145  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  51791352 ctcacacaatttaattgtgaagaagtggagtgtctgggttcgaacc 51791307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 46022 - 45973
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctggg 137  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  46022 tagtggctagaactcacacaattaaattgtggagaagtggagtgtctggg 45973  T

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Target: chr5 (Bit Score: 38; Significance: 0.000000000007; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 32423677 - 32423628
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctggg 137  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  32423677 tagtggctagaactcacacaattaaattgtggagaagtggagtgtctggg 32423628  T

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Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 34208485 - 34208428
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtct-gggttcgaacc 145  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||| |||||||||||    
T  34208485 tagtggctagaactcacacaattaattgtggagaagtggggtgtctggggttcgaacc 34208428  T

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Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 35241507 - 35241450
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctgggttcgaacc 145  Q
    |||||||||  |||||||||||||||| |||||||||||||||||| |||||||||||    
T  35241507 tagtggctaaaactcacacaattaaattgtggagaagtggagtgtcagggttcgaacc 35241450  T

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Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 17064817 - 17064861
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtc 133  Q
    |||||||||| |||||||||||||||||||||||||||| |||||    
T  17064817 tagtggctagaactcacacaattaaatgtggagaagtggggtgtc 17064861  T

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Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 37553896 - 37553947
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtctgg-gttcgaacctcggcc 151  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||||||||    
T  37553896 ctcacacaattaaatgtggataagtggggtgtctggagttcgaacctcggcc 37553947  T

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Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 831698 - 831656
Alignment:
Q  91 gtggctagtactcacacaattaaatgtggagaagtggagtgtc 133  Q
    |||||||| |||||||||||||||||||||||||||| |||||    
T  831698 gtggctagaactcacacaattaaatgtggagaagtggggtgtc 831656  T

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Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 620 - 690
Target Start/End: Original strand, 17135684 - 17135753
Alignment:
Q  620 agagaaatagagaattgctcttggtgagcaattgagaagaattttgtggttacttttgtaactctcttgtt 690  Q
    |||||||||| || |||||||| ||||||||||||| | |||||  |||| ||||||||||||||||||||    
T  17135684 agagaaataggga-ttgctctttgtgagcaattgaggataatttcttggtcacttttgtaactctcttgtt 17135753  T

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Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 4068081 - 4068033
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcg 148  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||||||    
T  4068081 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcg 4068033  T

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Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 21749336 - 21749392
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctgggttcgaac 144  Q
    ||||||||||  ||||||||||| ||| |||||||||||||||||| ||||||||||    
T  21749336 tagtggctagagctcacacaatttaattgtggagaagtggagtgtccgggttcgaac 21749392  T

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Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 37684517 - 37684565
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtctgg-gttcgaacctcg 148  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||||    
T  37684517 ctcacacaattaaatgtggataagtggggtgtctggagttcgaacctcg 37684565  T

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Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 7171827 - 7171776
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtct-gggttcgaacctcggcc 151  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||||| |||||    
T  7171827 ctcacacaattaattgtggagaagtggggtgtctggggttcgaaccccggcc 7171776  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 14804941 - 14805000
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctc 147  Q
    ||||||||||   |||||||||||||||||||||||||| |||| | |||||||||||||    
T  14804941 tagtggctagagttcacacaattaaatgtggagaagtggggtgtccggggttcgaacctc 14805000  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 20145535 - 20145586
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtctg-ggttcgaacctcggcc 151  Q
    ||||||||||||||||||||||||||| ||||| | |||||||||| |||||    
T  20145535 ctcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccccggcc 20145586  T

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Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 36735984 - 36735926
Alignment:
Q  89 tagtggctagtactcacacaattaaat--gtggagaagtggagtgtct-gggttcgaac 144  Q
    ||||||||||  |||||||||||||||  ||||||||||||||||||| ||||||||||    
T  36735984 tagtggctagagctcacacaattaaatttgtggagaagtggagtgtctagggttcgaac 36735926  T

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Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 41179761 - 41179824
Alignment:
Q  89 tagtggctagtactcacacaatt-aaatgtggagaagtggagtgtctggg-ttcgaacctcggc 150  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||| ||| |||||||| ||||    
T  41179761 tagtggctagagctcacacaatttaaatgtggagaagtggagtgtccgggattcgaaccccggc 41179824  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 29154954 - 29154896
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgt-ctgggttcgaacc 145  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||| | |||||||||||    
T  29154954 tagtggctagaactcacacaatttaattgtggagaagtggagtgtccggggttcgaacc 29154896  T

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Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 40276401 - 40276439
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtgg 127  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  40276401 tagtggctagaactcacacaattaattgtggagaagtgg 40276439  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 2363082 - 2363033
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctggg 137  Q
    ||||||||||  ||||||||||||||| ||| ||||||||||||||||||    
T  2363082 tagtggctagagctcacacaattaaattgtgaagaagtggagtgtctggg 2363033  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 8571904 - 8571847
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtg-tctgggttcgaacc 145  Q
    ||||||||||  ||||||||||||||||||||||||| | ||| || |||||||||||    
T  8571904 tagtggctagagctcacacaattaaatgtggagaagtagggtgttcggggttcgaacc 8571847  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 11188640 - 11188689
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtctggg 137  Q
    ||||||||||  |||||||||||||| ||||||||||| |||||||||||    
T  11188640 tagtggctagagctcacacaattaaattgtggagaagttgagtgtctggg 11188689  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 23292376 - 23292433
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtctg-ggttcgaacc 145  Q
    |||||||||| | |||||||||||| ||||||||||||| ||||| | ||||||||||    
T  23292376 tagtggctagaattcacacaattaattgtggagaagtggggtgtccgaggttcgaacc 23292433  T

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Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 24477924 - 24477879
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtctg-ggttcgaacc 145  Q
    ||||||||||||||||||||||||||| ||||| | ||||||||||    
T  24477924 ctcacacaattaaatgtggagaagtggggtgtccgaggttcgaacc 24477879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 25648042 - 25648091
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctggg 137  Q
    ||||||||||  ||||||||||| ||| ||||||||||||||||||||||    
T  25648042 tagtggctagagctcacacaatttaattgtggagaagtggagtgtctggg 25648091  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 25729399 - 25729456
Alignment:
Q  90 agtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    |||||||||  ||||||||||| ||| ||||||||||||||||||| |||||||||||    
T  25729399 agtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaacc 25729456  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 133
Target Start/End: Complemental strand, 28906902 - 28906873
Alignment:
Q  104 acacaattaaatgtggagaagtggagtgtc 133  Q
    ||||||||||||||||||||||||||||||    
T  28906902 acacaattaaatgtggagaagtggagtgtc 28906873  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 133
Target Start/End: Complemental strand, 28943297 - 28943268
Alignment:
Q  104 acacaattaaatgtggagaagtggagtgtc 133  Q
    ||||||||||||||||||||||||||||||    
T  28943297 acacaattaaatgtggagaagtggagtgtc 28943268  T

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Target: chr3 (Bit Score: 38; Significance: 0.000000000007; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 44764831 - 44764774
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    ||||||||||  |||||||||||||||||||||||||||||||| | |||||||||||    
T  44764831 tagtggctagagctcacacaattaaatgtggagaagtggagtgtccggggttcgaacc 44764774  T

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Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 17608277 - 17608341
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| | ||||||||||| |||||    
T  17608277 tagtggctagaactcacacaattaaattgtggagaagtggagtgtccagggttcgaaccccggcc 17608341  T

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Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 24303501 - 24303438
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  ||||||||||||||||||||||||||| |||| | ||||||||||| |||||    
T  24303501 tagtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcc 24303438  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 44764528 - 44764591
Alignment:
Q  89 tagtggctagtactcacacaattaaatg-tggagaagtggagtgtctgggttcgaacctcggcc 151  Q
    ||||||||||  |||||||||||||||  ||||||||||||||||| ||||||||| |||||||    
T  44764528 tagtggctagagctcacacaattaaattatggagaagtggagtgtcggggttcgaatctcggcc 44764591  T

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Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 6488236 - 6488178
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  6488236 tagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaacc 6488178  T

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Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 22501889 - 22501947
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  22501889 tagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaacc 22501947  T

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Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 25716011 - 25716057
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtctg 135  Q
    ||||||||||  |||| ||||||||||||||||||||||||||||||    
T  25716011 tagtggctagagctcaaacaattaaatgtggagaagtggagtgtctg 25716057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 133
Target Start/End: Complemental strand, 40192261 - 40192223
Alignment:
Q  95 ctagtactcacacaattaaatgtggagaagtggagtgtc 133  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  40192261 ctagaactcacacaattaaatgtggagaagtggagtgtc 40192223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 47098855 - 47098780
Alignment:
Q  76 atcaagtagcttatagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacctcggcc 151  Q
    |||||||||||||  ||||||||  ||||||||||| ||| ||||||||||||||||||| ||||||||||| |||||    
T  47098855 atcaagtagctta--gtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccggcc 47098780  T

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Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 4542009 - 4541952
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctgggttcgaacc 145  Q
    ||||||||||   |||||||||||||| |||||||||||||||||||||| |||||||    
T  4542009 tagtggctagagttcacacaattaaattgtggagaagtggagtgtctggggtcgaacc 4541952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 5173969 - 5174026
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtg-tctgggttcgaacc 145  Q
    ||||||||||  ||||||||||||||||||||||||||| ||| || |||||||||||    
T  5173969 tagtggctagagctcacacaattaaatgtggagaagtggggtgttcggggttcgaacc 5174026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 39966035 - 39966092
Alignment:
Q  92 tggctagtactcacacaattaaat-gtggagaagtggagtgtctg-ggttcgaacctc 147  Q
    |||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  39966035 tggctagagctcacacaattaaattgtggagaagtggagtgtctgaggttcgaacctc 39966092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 53752658 - 53752703
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtc 133  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||    
T  53752658 tagtggctagaactcacacaattaaattgtggagaagtggagtgtc 53752703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 33225296 - 33225369
Alignment:
Q  77 tcaagtagcttatagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacctcggc 150  Q
    ||||||||||||  ||||||||  ||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||    
T  33225296 tcaagtagctta--gtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccggc 33225369  T

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Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 41411586 - 41411630
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtc 133  Q
    |||||||||| ||||||||||||||||||||||||| || |||||    
T  41411586 tagtggctagaactcacacaattaaatgtggagaagcggggtgtc 41411630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 44685127 - 44685175
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtctggg 137  Q
    |||||||||| |||||||||||||| ||||||||||||| |||| ||||    
T  44685127 tagtggctagaactcacacaattaattgtggagaagtggggtgtttggg 44685175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 19222557 - 19222608
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||| |||||    
T  19222557 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcc 19222608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 47098615 - 47098564
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtct-gggttcgaacctcggcc 151  Q
    |||||| |||||||||||||||||||  |||||| |||||||||||||||||    
T  47098615 ctcacataattaaatgtggagaagtgaggtgtctggggttcgaacctcggcc 47098564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 53203923 - 53203876
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtctggg-ttcgaacctc 147  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||    
T  53203923 ctcacacaattaaatgtggagaagttgggtgtctgggattcgaacctc 53203876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 53347238 - 53347306
Alignment:
Q  77 tcaagtagcttatagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||||  ||||| ||  ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  53347238 tcaagtagctta--gtggccagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaacc 53347306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 13638215 - 13638261
Alignment:
Q  101 ctcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  13638215 ctcacacaattaaattgtggagaagtggagtgtctggggttcgaacc 13638261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 30779525 - 30779583
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||| | |||||||||||    
T  30779525 tagtggctagaactcacacaattaaattgtggagaagtggggtgtccagggttcgaacc 30779583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 33606898 - 33606956
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    ||||||||||  |||||||||||||| |||||||||||||||||| | |||||||||||    
T  33606898 tagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaacc 33606956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 34757628 - 34757570
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtctg-ggttcgaacc 145  Q
    ||||||||||  |||||||||||||| |||||||||||| |||||||| ||||||||||    
T  34757628 tagtggctagagctcacacaattaaattgtggagaagtgaagtgtctgtggttcgaacc 34757570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 144
Target Start/End: Complemental strand, 39709128 - 39709094
Alignment:
Q  110 ttaaatgtggagaagtggagtgtctgggttcgaac 144  Q
    |||||||||||||||||||||||| ||||||||||    
T  39709128 ttaaatgtggagaagtggagtgtcggggttcgaac 39709094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 43280174 - 43280116
Alignment:
Q  94 gctagtactcacacaattaaatgtggagaagtggagtgtctggg-ttcgaacctcggcc 151  Q
    ||||| ||||||||| |||||||||||||||||| ||||| ||| |||||||| |||||    
T  43280174 gctagaactcacacatttaaatgtggagaagtggggtgtccgggattcgaaccccggcc 43280116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 52309071 - 52309126
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtct-gggttcgaacc 145  Q
    |||||||||| |||||||  ||||||||||||||||||| |||||| |||||||||||    
T  52309071 tagtggctagaactcaca--attaaatgtggagaagtggggtgtctggggttcgaacc 52309126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 17218600 - 17218555
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtc 133  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||    
T  17218600 tagtggctagagctcacacaattaaattgtggagaagtggagtgtc 17218555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 144
Target Start/End: Complemental strand, 19550618 - 19550561
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgt-ctgggttcgaac 144  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||| | ||||||||||    
T  19550618 tagtggctagaactcacacaatttaattgtggagaagtggagtgtacggggttcgaac 19550561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 34579416 - 34579473
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctgggttcgaacc 145  Q
    ||||||||||   |||||||||| ||| |||||||||||||||||| |||||||||||    
T  34579416 tagtggctagagttcacacaatttaattgtggagaagtggagtgtcagggttcgaacc 34579473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 38819282 - 38819339
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtctgggttcgaacc 145  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||  ||||| |||||    
T  38819282 tagtggctagagctcacacaattaaattgtggagaagtggagtgttggggttagaacc 38819339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 40910138 - 40910187
Alignment:
Q  89 tagtggctagtactcacacaat-taaatgtggagaagtggagtgtctggg 137  Q
    ||||||||||  |||||||||| ||| |||||||||||||||||||||||    
T  40910138 tagtggctagagctcacacaatataattgtggagaagtggagtgtctggg 40910187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 49375643 - 49375684
Alignment:
Q  92 tggctagtactcacacaattaaatgtggagaagtggagtgtc 133  Q
    ||||||| ||||||| |||||||||||| |||||||||||||    
T  49375643 tggctagaactcacataattaaatgtggtgaagtggagtgtc 49375684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 52410199 - 52410248
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctggg 137  Q
    ||||||||||  ||||||||||| ||| ||||||||||||||||||||||    
T  52410199 tagtggctagagctcacacaatttaattgtggagaagtggagtgtctggg 52410248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000007; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 15233534 - 15233476
Alignment:
Q  77 tcaagtagcttatagtggctagtactcacacaattaaatgtggagaagtggagtgtctggg 137  Q
    ||||||||||||  |||||||| |||||||||||||| ||| |||||||||||||||||||    
T  15233534 tcaagtagctta--gtggctagaactcacacaattaactgtagagaagtggagtgtctggg 15233476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 5521178 - 5521242
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    |||||||||| ||||||||||||||| |||||| ||||||||||| | |||||||||||||||||    
T  5521178 tagtggctagaactcacacaattaaattgtggaaaagtggagtgtccagggttcgaacctcggcc 5521242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 3287015 - 3287078
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  |||||||||||||||||||||||||||||| | | ||||||||||| |||||    
T  3287015 tagtggctagagctcacacaattaaatgtggagaagtggagtatccggggttcgaaccccggcc 3287078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 21438934 - 21438889
Alignment:
Q  101 ctcacacaattaaat-gtggagaagtggagtgtctgggttcgaacc 145  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||    
T  21438934 ctcacacaattaaattgtggagaagtggagtgtcggggttcgaacc 21438889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 41566874 - 41566825
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctggg 137  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  41566874 tagtggctagagctcacacaattaaattgtggagaagtggagtgtctggg 41566825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 39408647 - 39408711
Alignment:
Q  88 atagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacctcggc 150  Q
    |||||||||||  ||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||    
T  39408647 atagtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccggc 39408711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 19684182 - 19684127
Alignment:
Q  91 gtggctagtactcacacaattaaat-gtggagaagtggagtgtctgggttcgaacc 145  Q
    ||||||||  ||||||||||| ||| |||||||||||||||||| |||||||||||    
T  19684182 gtggctagagctcacacaatttaattgtggagaagtggagtgtcggggttcgaacc 19684127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 20919721 - 20919658
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  |||||| |||||||||||||||||||| |||| | ||||||||||| |||||    
T  20919721 tagtggctagagctcacataattaaatgtggagaagtggggtgtccggggttcgaaccccggcc 20919658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 28692446 - 28692501
Alignment:
Q  92 tggctagtactcacacaattaaat-gtggagaagtggagtgt-ctgggttcgaacc 145  Q
    |||||||  ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  28692446 tggctagagctcacacaattaaattgtggagaagtggagtgtcctgggttcgaacc 28692501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 33233170 - 33233233
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctgg-gttcgaacctcggc 150  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||| || ||||||||| ||||    
T  33233170 tagtggctagaactcacacaatttaattgtggagaagtggagtgtccggagttcgaaccccggc 33233233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 2305180 - 2305138
Alignment:
Q  92 tggctagtactcacacaattaaa-tgtggagaagtggagtgtc 133  Q
    ||||||| ||||||||||||||| |||||||||||||||||||    
T  2305180 tggctagaactcacacaattaaattgtggagaagtggagtgtc 2305138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 18694897 - 18694839
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctggg-ttcgaacc 145  Q
    ||||||||||  ||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  18694897 tagtggctagagctcacacaatttaattgtggagaagtggagtgtctgggattcgaacc 18694839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 29772236 - 29772294
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  |||||||||||||| ||||||||| |||||||||| |||||||||||    
T  29772236 tagtggctagagctcacacaattaaattgtggagaattggagtgtctggggttcgaacc 29772294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 1027604 - 1027649
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtctg-ggttcgaacc 145  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||    
T  1027604 ctcacacaattaaatgtgtagaagtagagtgtctgaggttcgaacc 1027649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 3596349 - 3596304
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    ||||||||||||||||||||||||||| |||| | |||||||||||    
T  3596349 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaacc 3596304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 31223720 - 31223683
Alignment:
Q  101 ctcacacaattaaat-gtggagaagtggagtgtctggg 137  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  31223720 ctcacacaattaaattgtggagaagtggagtgtctggg 31223683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 151
Target Start/End: Complemental strand, 34355843 - 34355769
Alignment:
Q  77 tcaagtagcttatagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacctcggcc 151  Q
    ||||||||||||  |||| |||  |||| |||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  34355843 tcaagtagctta--gtggttagagctcatacaattaaattgtggagaagtggagtgtctggggttcgaaccccggcc 34355769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 44822536 - 44822472
Alignment:
Q  89 tagtggctagtactcacacaattaaa--tgtggagaagtggagtgtct-gggttcgaacctcggc 150  Q
    ||||||||||  ||||||||||| ||  |||||||||||||||||||| ||||||||||| ||||    
T  44822536 tagtggctagagctcacacaatttaaattgtggagaagtggagtgtctggggttcgaaccccggc 44822472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.0000000001; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 38283235 - 38283172
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtct-gggttcgaacctcggcc 151  Q
    ||||||||||   |||||||||||||||||||||||||| |||||| ||||||||||| |||||    
T  38283235 tagtggctagagttcacacaattaaatgtggagaagtggggtgtctggggttcgaaccccggcc 38283172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 16449237 - 16449179
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  16449237 tagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaacc 16449179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 9407502 - 9407441
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtg-tctgggttcgaacctcg 148  Q
    ||||||||||  |||||||||||||| |||||||||||| |||| |||||||||||||||||    
T  9407502 tagtggctagagctcacacaattaaattgtggagaagtgaagtgttctgggttcgaacctcg 9407441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 12770477 - 12770416
Alignment:
Q  91 gtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||  ||||||||||||||||||||||||||| |||| | ||||||||||| |||||    
T  12770477 gtggctagagctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcc 12770416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 41865041 - 41865098
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtct-gggttcgaacc 145  Q
    |||||||||  ||||||||||||||||||||| || |||||||||| |||||||||||    
T  41865041 tagtggctataactcacacaattaaatgtggaaaaatggagtgtctggggttcgaacc 41865098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 8034370 - 8034434
Alignment:
Q  89 tagtggctagtactcacacaa-ttaaatgtggagaagtggagtgtctgg-gttcgaacctcggcc 151  Q
    |||||||||| |||||||||| |||| ||||||||||||| |||||||| ||||||||| |||||    
T  8034370 tagtggctagaactcacacaatttaattgtggagaagtggggtgtctggtgttcgaaccccggcc 8034434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 26022359 - 26022295
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacctcggcc 151  Q
    ||||||||||   |||||||||||||| ||||||||||||||||||| ||||||||||| |||||    
T  26022359 tagtggctagaggtcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccggcc 26022295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 43847046 - 43847002
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtc 133  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||    
T  43847046 tagtggctagagctcacacaattaaatgtggagaagtggggtgtc 43847002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 481110 - 481059
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||| |||||    
T  481110 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccgcggcc 481059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 24458428 - 24458365
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  ||||||||||||||||||||||||| |||| | | ||||||||||| |||||    
T  24458428 tagtggctagagctcacacaattaaatgtggagaagttgagtatccggggttcgaaccccggcc 24458365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 8265380 - 8265322
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgt-ctgggttcgaacc 145  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||| | |||||||||||    
T  8265380 tagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaacc 8265322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 13647415 - 13647473
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    ||||||||||  |||||||||||||| |||||||||||||||||| | |||||||||||    
T  13647415 tagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaacc 13647473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 13747840 - 13747898
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    ||||||||||  |||||||||||||| |||||||||||||||||| | |||||||||||    
T  13747840 tagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaacc 13747898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 17027839 - 17027901
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctgggttcgaacctcggc 150  Q
    ||||||||||  ||||||||||| ||| |||||||||||| ||||| ||||||||||| ||||    
T  17027839 tagtggctagagctcacacaatttaattgtggagaagtggggtgtccgggttcgaaccccggc 17027901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 17558275 - 17558337
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctgggttcgaacctcggc 150  Q
    ||||||||||  ||||||||||| ||| |||||||||||| ||||| ||||||||||| ||||    
T  17558275 tagtggctagagctcacacaatttaattgtggagaagtggggtgtccgggttcgaaccccggc 17558337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 22274570 - 22274632
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggc 150  Q
    ||||||||||  ||||||||||||| ||||||||||||| |||| | ||||||||||| ||||    
T  22274570 tagtggctagagctcacacaattaattgtggagaagtggggtgtccggggttcgaaccccggc 22274632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 33604136 - 33604194
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctggg-ttcgaacc 145  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||| ||| ||||||||    
T  33604136 tagtggctagaactcacacaatttaattgtggagaagtggagtgtccgggattcgaacc 33604194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 38344161 - 38344103
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  ||||||||||| ||| ||||||||||||||||||| |||||||||||    
T  38344161 tagtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaacc 38344103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 39169597 - 39169539
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  ||||||||||||||| |||||||||| |||||||| |||||||||||    
T  39169597 tagtggctagagctcacacaattaaattgtggagaagttgagtgtctggggttcgaacc 39169539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 151
Target Start/End: Original strand, 4654068 - 4654132
Alignment:
Q  90 agtggctagtactcacacaattaaat-gtggagaagtggagtgtc--tgggttcgaacctcggcc 151  Q
    |||||||||  ||||||||||||||| ||||||||||||||||||   |||||||||||| ||||    
T  4654068 agtggctagagctcacacaattaaattgtggagaagtggagtgtccaggggttcgaaccttggcc 4654132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 23858309 - 23858264
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtc 133  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||    
T  23858309 tagtggctagaactcacacaattaaattgtggagaattggagtgtc 23858264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 25812180 - 25812225
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||||    
T  25812180 ctcacacaattaaatgttgagaagtggggtgtctggggttcgaacc 25812225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 25824861 - 25824918
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  |||||||||||| |||| ||||||||| |||||| |||||||||||    
T  25824861 tagtggctagagctcacacaattatatgttgagaagtggggtgtctggggttcgaacc 25824918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 44444655 - 44444598
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    |||||||||  |||||||||||||| ||||||||||||| |||| | |||||||||||    
T  44444655 tagtggctaaaactcacacaattaattgtggagaagtggggtgtccggggttcgaacc 44444598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.0000000001; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 6210167 - 6210108
Alignment:
Q  88 atagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||| ||| |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  6210167 atagtggttagaactcacacaattaaattgtggagaagtggagtgtctggggttcgaacc 6210108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 3795732 - 3795790
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctg-ggttcgaacc 145  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  3795732 tagtggctagagctcacacaattaaattgtggagaagtggagtgtctgaggttcgaacc 3795790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 7865303 - 7865358
Alignment:
Q  77 tcaagtagcttatagtggctagtactcacacaattaaa-tgtggagaagtggagtgtc 133  Q
    ||||||||||||  |||||||| ||||||||||||||| |||||||||||||||||||    
T  7865303 tcaagtagctta--gtggctagaactcacacaattaaattgtggagaagtggagtgtc 7865358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 15963901 - 15963959
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| | |||||||||||    
T  15963901 tagtggctagaactcacacaattaaattgtggagaagtggagtgtccagggttcgaacc 15963959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 26347516 - 26347467
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctggg 137  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  26347516 tagtggctagagctcacacaattaaattgtggagaagtggagtgtctggg 26347467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 30264 - 30328
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||| | ||||||||||| |||||    
T  30264 tagtggctagaactcacacaattaaattgtgaagaagtggagtgtccagggttcgaaccccggcc 30328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 3640626 - 3640562
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctg-ggttcgaacctcggcc 151  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||| | |||||||||| |||||    
T  3640626 tagtggctagagctcacacaattaaattgtggagaagtggagtgtccgaggttcgaaccccggcc 3640562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 14708978 - 14709042
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgtctgg-gttcgaacctcggcc 151  Q
    |||||||||| ||||||||||||||| || |||||||||||||||| || ||||||||| |||||    
T  14708978 tagtggctagaactcacacaattaaattgaggagaagtggagtgtccggagttcgaaccccggcc 14709042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 17534958 - 17534922
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagt 125  Q
    |||||||||| ||||||||||||||||||||||||||    
T  17534958 tagtggctagaactcacacaattaaatgtggagaagt 17534922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 24319121 - 24319061
Alignment:
Q  92 tggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    |||||||  ||||||||||||| |||||||||||||||||| | ||||||||||| |||||    
T  24319121 tggctagagctcacacaattaattgtggagaagtggagtgtccggggttcgaaccccggcc 24319061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 1435918 - 1435863
Alignment:
Q  91 gtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    ||||||||  |||||||||||||||||||||||||||| ||| | |||||||||||    
T  1435918 gtggctagagctcacacaattaaatgtggagaagtggaatgtccggggttcgaacc 1435863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 145
Target Start/End: Original strand, 10913027 - 10913095
Alignment:
Q  77 tcaagtagcttatagtggctagtactcacacaattaaatg-tggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||||  ||||||||  |||||||||||||||  |||||||||||||||||| |||||||||||    
T  10913027 tcaagtagctta--gtggctagagctcacacaattaaattatggagaagtggagtgtctggggttcgaacc 10913095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 10934711 - 10934648
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgt-ctgggttcgaacctcggc 150  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||| | ||||||||||| ||||    
T  10934711 tagtggctagaactcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccggc 10934648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 9372159 - 9372217
Alignment:
Q  89 tagtggctagtactcacacaattaaa-tgtggagaagtggagtgt-ctgggttcgaacc 145  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||| | |||||||||||    
T  9372159 tagtagctagaactcacacaattaaattgtggagaagtggagtgtccagggttcgaacc 9372217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 9704528 - 9704466
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtctgggttcgaacctcggc 150  Q
    ||||||||||  ||||||||||| ||| ||||||||| ||||| || ||||||||||||||||    
T  9704528 tagtggctagagctcacacaatttaattgtggagaagcggagtatcggggttcgaacctcggc 9704466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 32166481 - 32166436
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtc 133  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||    
T  32166481 tagtggctagagctcacacaattaaattgtggagaagtggagtgtc 32166436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 3972 - 4030
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtct-gggttcgaacc 145  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||||    
T  3972 tagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaacc 4030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 151
Target Start/End: Complemental strand, 24491 - 24428
Alignment:
Q  89 tagtggctagtactcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||  |||||||| ||||||||| ||||||||||||| | ||||||||||| |||||    
T  24491 tagtggctagagctcacacatttaaatgtgaagaagtggagtgtccggggttcgaaccccggcc 24428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 28792 - 28843
Alignment:
Q  101 ctcacacaattaaatgtggagaagtggagtgt-ctgggttcgaacctcggcc 151  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||| |||||    
T  28792 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcc 28843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 27888 - 27933
Alignment:
Q  89 tagtggctagtactcacacaattaaat-gtggagaagtggagtgtc 133  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||    
T  27888 tagtggctagaactcacacaatttaattgtggagaagtggagtgtc 27933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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