View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1732-Insertion-4 (Length: 1087)

Name: NF1732-Insertion-4
Description: NF1732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1732-Insertion-4
NF1732-Insertion-4
[»] chr2 (67 HSPs)
chr2 (8-349)||(2624912-2625254)
chr2 (437-617)||(13061716-13061896)
chr2 (853-1005)||(2550822-2550974)
chr2 (853-985)||(42770671-42770803)
chr2 (853-1018)||(18902517-18902682)
chr2 (853-1005)||(7747228-7747380)
chr2 (853-1005)||(8410085-8410237)
chr2 (858-1005)||(25540404-25540551)
chr2 (853-1005)||(20612534-20612688)
chr2 (859-1005)||(41220595-41220741)
chr2 (852-1005)||(14169609-14169762)
chr2 (853-985)||(10026636-10026768)
chr2 (868-1005)||(10823029-10823166)
chr2 (852-1001)||(21286397-21286546)
chr2 (852-985)||(38962716-38962849)
chr2 (857-985)||(22593093-22593220)
chr2 (852-982)||(37560126-37560256)
chr2 (852-1005)||(38005355-38005508)
chr2 (853-1018)||(3643874-3644039)
chr2 (852-1005)||(12864177-12864330)
chr2 (853-996)||(331455-331598)
chr2 (853-1000)||(39201513-39201660)
chr2 (852-982)||(34722634-34722763)
chr2 (852-1005)||(2528341-2528494)
chr2 (858-971)||(13026445-13026558)
chr2 (852-985)||(24179524-24179654)
chr2 (852-973)||(34356159-34356280)
chr2 (853-1005)||(41031906-41032057)
chr2 (852-982)||(19976830-19976960)
chr2 (852-1005)||(28616379-28616533)
chr2 (853-1017)||(44945548-44945712)
chr2 (856-1005)||(16813165-16813313)
chr2 (856-1005)||(16852444-16852592)
chr2 (853-1018)||(44139438-44139603)
chr2 (852-985)||(45263687-45263820)
chr2 (853-985)||(7787010-7787142)
chr2 (859-1015)||(31596422-31596578)
chr2 (853-1005)||(35946693-35946844)
chr2 (641-688)||(13061921-13061968)
chr2 (851-982)||(25549680-25549811)
chr2 (898-1005)||(27725939-27726046)
chr2 (854-972)||(41187804-41187922)
chr2 (864-985)||(3811711-3811832)
chr2 (852-985)||(6358171-6358304)
chr2 (856-1005)||(11069835-11069984)
chr2 (852-985)||(39806905-39807038)
chr2 (853-985)||(10046497-10046628)
chr2 (852-972)||(21180347-21180467)
chr2 (922-1001)||(10669615-10669694)
chr2 (852-982)||(29422168-29422298)
chr2 (852-1005)||(18649026-18649179)
chr2 (853-981)||(10106542-10106670)
chr2 (861-1005)||(16034899-16035043)
chr2 (917-1005)||(20116612-20116700)
chr2 (852-932)||(23500755-23500834)
chr2 (866-1005)||(2784900-2785038)
chr2 (906-1005)||(16325602-16325701)
chr2 (923-1005)||(9360748-9360830)
chr2 (923-1005)||(12455334-12455416)
chr2 (852-981)||(5035241-5035370)
chr2 (923-1005)||(29653651-29653728)
chr2 (852-1005)||(14853366-14853520)
chr2 (853-945)||(33005706-33005797)
chr2 (853-945)||(37804951-37805043)
chr2 (965-1005)||(44023361-44023401)
chr2 (852-919)||(32028366-32028433)
chr2 (923-981)||(28525479-28525537)
[»] chr3 (69 HSPs)
chr3 (438-818)||(54928803-54929184)
chr3 (852-1040)||(22405507-22405697)
chr3 (461-617)||(50466364-50466520)
chr3 (853-1002)||(10040511-10040659)
chr3 (853-1005)||(25294914-25295066)
chr3 (853-1005)||(29762156-29762308)
chr3 (852-1005)||(54261179-54261332)
chr3 (852-1005)||(29127872-29128025)
chr3 (853-1005)||(6462366-6462518)
chr3 (853-1005)||(29135867-29136019)
chr3 (852-1005)||(13893879-13894032)
chr3 (852-1005)||(48341973-48342126)
chr3 (852-1005)||(51060282-51060435)
chr3 (852-1018)||(49543472-49543638)
chr3 (852-1005)||(15320139-15320292)
chr3 (852-1005)||(35315909-35316062)
chr3 (853-984)||(3755524-3755655)
chr3 (915-1005)||(19146977-19147067)
chr3 (852-1005)||(31072831-31072984)
chr3 (852-1005)||(45877407-45877560)
chr3 (869-1005)||(53649697-53649833)
chr3 (857-1005)||(7328802-7328949)
chr3 (853-985)||(30767268-30767400)
chr3 (881-1005)||(54237430-54237554)
chr3 (898-1005)||(34662320-34662427)
chr3 (853-972)||(39849026-39849144)
chr3 (853-972)||(42412808-42412927)
chr3 (853-1003)||(26207804-26207954)
chr3 (853-983)||(47303512-47303642)
chr3 (852-1005)||(3136695-3136847)
chr3 (916-1005)||(7650244-7650333)
chr3 (852-985)||(49198304-49198437)
chr3 (852-1005)||(51682955-51683108)
chr3 (852-976)||(3763004-3763127)
chr3 (857-1005)||(28572212-28572360)
chr3 (852-984)||(41630534-41630666)
chr3 (641-688)||(50466289-50466336)
chr3 (852-982)||(10855337-10855466)
chr3 (871-972)||(15795528-15795628)
chr3 (852-1005)||(47749106-47749258)
chr3 (852-945)||(49082777-49082870)
chr3 (869-974)||(52364832-52364937)
chr3 (921-1005)||(3507534-3507618)
chr3 (852-976)||(33251615-33251739)
chr3 (861-1005)||(47219106-47219250)
chr3 (921-982)||(30045843-30045904)
chr3 (852-933)||(30735018-30735099)
chr3 (906-970)||(4638161-4638225)
chr3 (853-1005)||(7310704-7310856)
chr3 (915-982)||(7648756-7648823)
chr3 (853-968)||(41219547-41219661)
chr3 (911-985)||(928612-928686)
chr3 (852-1005)||(26361968-26362119)
chr3 (852-982)||(35923647-35923777)
chr3 (852-945)||(7612987-7613080)
chr3 (852-945)||(11687170-11687263)
chr3 (936-1005)||(49021204-49021273)
chr3 (921-985)||(8164575-8164639)
chr3 (853-945)||(37092566-37092658)
chr3 (898-1005)||(22909783-22909889)
chr3 (954-1005)||(36043675-36043726)
chr3 (863-1005)||(37319890-37320033)
chr3 (852-890)||(32873664-32873702)
chr3 (923-985)||(43330753-43330815)
chr3 (852-890)||(46529986-46530024)
chr3 (923-1001)||(50405608-50405686)
chr3 (948-981)||(19873421-19873454)
chr3 (906-1018)||(26590254-26590366)
chr3 (921-1018)||(55069667-55069764)
[»] chr8 (42 HSPs)
chr8 (853-1005)||(2467118-2467270)
chr8 (852-973)||(6100429-6100550)
chr8 (852-1005)||(43032858-43033011)
chr8 (853-1005)||(15884556-15884707)
chr8 (853-1005)||(24837200-24837352)
chr8 (853-1005)||(10927564-10927716)
chr8 (853-1005)||(17981399-17981551)
chr8 (852-978)||(13085481-13085607)
chr8 (852-1005)||(3418513-3418666)
chr8 (852-985)||(8141059-8141192)
chr8 (852-985)||(18373967-18374100)
chr8 (853-1005)||(14666071-14666223)
chr8 (880-984)||(22958755-22958859)
chr8 (865-985)||(36914453-36914573)
chr8 (852-1018)||(43027262-43027428)
chr8 (853-966)||(13358980-13359093)
chr8 (852-1005)||(14846533-14846685)
chr8 (853-962)||(38922457-38922566)
chr8 (853-1018)||(45521127-45521291)
chr8 (921-1005)||(4479296-4479380)
chr8 (852-968)||(44893315-44893431)
chr8 (852-1005)||(583771-583922)
chr8 (852-1001)||(68102-68251)
chr8 (852-1005)||(10535404-10535556)
chr8 (852-945)||(22810037-22810129)
chr8 (852-981)||(33401823-33401952)
chr8 (853-973)||(1013009-1013129)
chr8 (853-1005)||(2964034-2964186)
chr8 (856-1005)||(7673657-7673803)
chr8 (852-946)||(6940515-6940609)
chr8 (853-1019)||(8997530-8997696)
chr8 (852-985)||(9860015-9860149)
chr8 (853-1005)||(16893895-16894045)
chr8 (852-964)||(34613819-34613931)
chr8 (914-1001)||(13357960-13358047)
chr8 (922-1005)||(23895595-23895678)
chr8 (852-982)||(26570881-26571011)
chr8 (853-982)||(35496278-35496406)
chr8 (910-966)||(8586978-8587034)
chr8 (852-972)||(18091358-18091477)
chr8 (852-940)||(44031505-44031593)
chr8 (852-890)||(34846771-34846809)
[»] chr6 (41 HSPs)
chr6 (853-1005)||(21898606-21898758)
chr6 (853-1005)||(13036004-13036156)
chr6 (853-982)||(2271326-2271453)
chr6 (853-1018)||(5253210-5253375)
chr6 (852-1005)||(14107358-14107511)
chr6 (861-1005)||(6606097-6606241)
chr6 (860-1005)||(30788853-30788996)
chr6 (853-1005)||(3601042-3601194)
chr6 (853-1005)||(13468891-13469043)
chr6 (853-1005)||(19089456-19089608)
chr6 (852-1005)||(8611974-8612127)
chr6 (916-1005)||(12606451-12606540)
chr6 (852-985)||(19230579-19230710)
chr6 (853-985)||(29444785-29444917)
chr6 (858-1005)||(8932624-8932771)
chr6 (858-1005)||(8944090-8944237)
chr6 (922-1005)||(9633625-9633708)
chr6 (853-960)||(10311514-10311621)
chr6 (852-982)||(34954642-34954771)
chr6 (852-985)||(9179756-9179889)
chr6 (852-1005)||(8938668-8938821)
chr6 (853-969)||(9366459-9366575)
chr6 (853-975)||(24671896-24672018)
chr6 (896-1005)||(5029818-5029927)
chr6 (852-930)||(3030693-3030771)
chr6 (852-974)||(3587976-3588098)
chr6 (921-971)||(10396499-10396549)
chr6 (863-1005)||(12635782-12635924)
chr6 (903-1005)||(30410453-30410555)
chr6 (856-982)||(33939972-33940098)
chr6 (853-930)||(5759586-5759663)
chr6 (852-973)||(9147258-9147379)
chr6 (853-982)||(17114920-17115049)
chr6 (921-985)||(32157187-32157251)
chr6 (923-982)||(8888910-8888969)
chr6 (959-1005)||(8149797-8149843)
chr6 (853-891)||(15643942-15643980)
chr6 (911-1005)||(31129193-31129287)
chr6 (852-1005)||(11142560-11142713)
chr6 (948-1005)||(14783420-14783477)
chr6 (853-890)||(21016866-21016903)
[»] chr4 (70 HSPs)
chr4 (854-1005)||(40780861-40781012)
chr4 (852-1005)||(38165985-38166138)
chr4 (853-1005)||(29895746-29895898)
chr4 (852-1003)||(1940779-1940927)
chr4 (853-976)||(1446785-1446908)
chr4 (858-1005)||(42722577-42722724)
chr4 (852-1005)||(53599018-53599171)
chr4 (852-1005)||(2559265-2559418)
chr4 (852-985)||(5472868-5473001)
chr4 (853-1018)||(47078417-47078582)
chr4 (852-1005)||(52950040-52950193)
chr4 (853-1018)||(55920993-55921158)
chr4 (853-985)||(7741884-7742016)
chr4 (852-1000)||(8888980-8889128)
chr4 (852-1018)||(38075391-38075557)
chr4 (852-985)||(6779169-6779302)
chr4 (853-1005)||(43458572-43458724)
chr4 (852-928)||(13552072-13552148)
chr4 (853-984)||(27248387-27248516)
chr4 (853-1001)||(48317279-48317427)
chr4 (853-972)||(3574479-3574598)
chr4 (858-1005)||(20128273-20128420)
chr4 (858-1005)||(36145215-36145362)
chr4 (853-1005)||(6032643-6032792)
chr4 (853-1018)||(24166409-24166574)
chr4 (916-1005)||(4738640-4738729)
chr4 (853-1005)||(33647680-33647832)
chr4 (864-1005)||(38168227-38168367)
chr4 (853-982)||(41162905-41163034)
chr4 (864-985)||(49260685-49260806)
chr4 (852-1004)||(295534-295685)
chr4 (921-1005)||(7246646-7246730)
chr4 (852-1007)||(13073496-13073651)
chr4 (859-1005)||(49952145-49952292)
chr4 (852-1005)||(14123974-14124127)
chr4 (853-970)||(29588695-29588812)
chr4 (857-985)||(36262787-36262913)
chr4 (852-1005)||(7000482-7000630)
chr4 (853-985)||(20532429-20532561)
chr4 (872-1004)||(21429279-21429411)
chr4 (906-1005)||(16450312-16450411)
chr4 (915-1005)||(14859312-14859402)
chr4 (911-1005)||(47682382-47682475)
chr4 (856-1005)||(15839935-15840083)
chr4 (916-1005)||(18531541-18531630)
chr4 (852-970)||(33109280-33109400)
chr4 (853-981)||(12703569-12703697)
chr4 (852-976)||(20354595-20354719)
chr4 (861-985)||(30317200-30317324)
chr4 (852-972)||(41339428-41339548)
chr4 (906-1005)||(43468359-43468458)
chr4 (852-1005)||(15829657-15829810)
chr4 (852-978)||(26479976-26480102)
chr4 (923-981)||(55703776-55703834)
chr4 (916-1001)||(3159473-3159558)
chr4 (97-146)||(33708226-33708275)
chr4 (921-985)||(3507297-3507361)
chr4 (911-971)||(14077963-14078023)
chr4 (852-972)||(55005339-55005459)
chr4 (852-1018)||(15732435-15732601)
chr4 (921-972)||(17080070-17080121)
chr4 (852-891)||(19651559-19651598)
chr4 (852-972)||(31588642-31588764)
chr4 (921-976)||(42722408-42722463)
chr4 (852-970)||(48656176-48656295)
chr4 (852-890)||(34667717-34667755)
chr4 (921-1018)||(48015060-48015157)
chr4 (853-890)||(14567210-14567247)
chr4 (853-890)||(27531772-27531809)
chr4 (852-945)||(40272391-40272484)
[»] chr7 (47 HSPs)
chr7 (853-982)||(1797417-1797546)
chr7 (853-1018)||(48804640-48804805)
chr7 (853-1005)||(4195202-4195354)
chr7 (852-1005)||(17748382-17748535)
chr7 (852-1005)||(34659182-34659335)
chr7 (853-1005)||(22993367-22993519)
chr7 (852-985)||(5039438-5039571)
chr7 (852-985)||(23658136-23658268)
chr7 (853-1001)||(13095815-13095963)
chr7 (853-1005)||(47341833-47341985)
chr7 (858-1005)||(10047876-10048023)
chr7 (852-1005)||(5069815-5069968)
chr7 (880-1005)||(38578867-38578992)
chr7 (852-1005)||(43346779-43346932)
chr7 (853-970)||(43925469-43925586)
chr7 (854-972)||(16802081-16802199)
chr7 (852-985)||(22973923-22974056)
chr7 (852-928)||(9685695-9685771)
chr7 (854-1004)||(18785627-18785777)
chr7 (852-1005)||(26423288-26423440)
chr7 (921-1018)||(39474965-39475062)
chr7 (921-1005)||(41945498-41945582)
chr7 (852-963)||(46414631-46414742)
chr7 (852-1005)||(43861972-43862125)
chr7 (852-1005)||(14650273-14650426)
chr7 (856-1005)||(21530708-21530857)
chr7 (852-1005)||(1605897-1606050)
chr7 (881-999)||(28396166-28396284)
chr7 (853-970)||(365097-365214)
chr7 (852-985)||(4973130-4973263)
chr7 (852-1005)||(8734686-8734839)
chr7 (852-985)||(36619274-36619407)
chr7 (921-1005)||(28744187-28744271)
chr7 (921-973)||(37514946-37514998)
chr7 (852-972)||(45960036-45960155)
chr7 (871-1018)||(21190767-21190914)
chr7 (852-1018)||(27875075-27875240)
chr7 (852-982)||(42032052-42032182)
chr7 (861-982)||(3353390-3353510)
chr7 (853-890)||(19914817-19914854)
chr7 (852-945)||(22268089-22268182)
chr7 (852-1005)||(27028235-27028388)
chr7 (852-1005)||(29805440-29805592)
chr7 (921-1001)||(39420862-39420942)
chr7 (852-891)||(4228865-4228904)
chr7 (853-904)||(11607088-11607139)
chr7 (853-930)||(34127695-34127772)
[»] chr1 (58 HSPs)
chr1 (855-1005)||(26325769-26325919)
chr1 (852-1005)||(5855476-5855629)
chr1 (852-1005)||(41663857-41664010)
chr1 (853-1005)||(8763946-8764098)
chr1 (853-1005)||(43959822-43959974)
chr1 (850-1005)||(45361883-45362038)
chr1 (852-1005)||(10422742-10422895)
chr1 (852-1005)||(17642005-17642158)
chr1 (852-1005)||(18915821-18915974)
chr1 (852-984)||(33418137-33418269)
chr1 (853-1005)||(49078069-49078221)
chr1 (852-974)||(32825-32947)
chr1 (852-1005)||(50371835-50371988)
chr1 (854-982)||(10336472-10336600)
chr1 (851-1018)||(30927715-30927882)
chr1 (856-1018)||(9659167-9659328)
chr1 (862-984)||(17092499-17092621)
chr1 (853-1018)||(2980919-2981084)
chr1 (852-1005)||(10172972-10173125)
chr1 (853-982)||(33498863-33498992)
chr1 (858-982)||(14254292-14254416)
chr1 (855-971)||(48798105-48798221)
chr1 (852-1005)||(2567230-2567383)
chr1 (852-1005)||(5503985-5504138)
chr1 (853-1018)||(11397877-11398041)
chr1 (852-1001)||(31576552-31576701)
chr1 (924-1005)||(37339846-37339927)
chr1 (852-972)||(32150956-32151076)
chr1 (862-1018)||(50503349-50503505)
chr1 (853-971)||(33004050-33004168)
chr1 (863-984)||(5063866-5063986)
chr1 (864-1005)||(16956432-16956573)
chr1 (856-973)||(25178609-25178725)
chr1 (853-1018)||(40288465-40288630)
chr1 (930-1018)||(4581670-4581758)
chr1 (853-985)||(45726454-45726586)
chr1 (862-1005)||(18649353-18649496)
chr1 (853-970)||(6563396-6563513)
chr1 (916-976)||(10507716-10507776)
chr1 (853-1005)||(15238107-15238259)
chr1 (906-1005)||(44969673-44969771)
chr1 (862-945)||(34334356-34334439)
chr1 (852-967)||(34877944-34878059)
chr1 (916-1005)||(16263563-16263652)
chr1 (863-1005)||(34697300-34697442)
chr1 (919-984)||(48761197-48761262)
chr1 (852-945)||(51437423-51437516)
chr1 (853-985)||(9853298-9853430)
chr1 (853-1005)||(26660093-26660244)
chr1 (923-978)||(17988688-17988743)
chr1 (921-972)||(21849239-21849290)
chr1 (922-976)||(13262107-13262161)
chr1 (852-1018)||(32142834-32142999)
chr1 (853-891)||(41743228-41743266)
chr1 (852-945)||(8905212-8905304)
chr1 (868-1001)||(26258666-26258798)
chr1 (898-971)||(28324615-28324688)
chr1 (931-976)||(35908791-35908836)
[»] scaffold0029 (1 HSPs)
scaffold0029 (852-1005)||(41000-41153)
[»] chr5 (62 HSPs)
chr5 (853-1005)||(42086282-42086434)
chr5 (852-1005)||(1538385-1538538)
chr5 (853-1005)||(5731920-5732072)
chr5 (853-1005)||(19572679-19572831)
chr5 (849-971)||(25417217-25417339)
chr5 (853-1018)||(7866536-7866701)
chr5 (853-1005)||(20525793-20525945)
chr5 (853-1005)||(37263196-37263347)
chr5 (861-1005)||(14588617-14588761)
chr5 (852-959)||(35403558-35403665)
chr5 (852-1005)||(9812826-9812979)
chr5 (852-1005)||(41163460-41163612)
chr5 (853-1005)||(8513474-8513626)
chr5 (852-1005)||(12704968-12705121)
chr5 (852-1005)||(12766085-12766238)
chr5 (853-1005)||(20682617-20682770)
chr5 (852-1005)||(30349533-30349686)
chr5 (854-970)||(4016290-4016406)
chr5 (852-972)||(7308397-7308517)
chr5 (857-981)||(9168277-9168399)
chr5 (906-1005)||(9805012-9805111)
chr5 (852-982)||(23247374-23247504)
chr5 (852-1005)||(42861218-42861371)
chr5 (852-1005)||(23383602-23383764)
chr5 (862-1018)||(11845788-11845944)
chr5 (906-1018)||(12081916-12082028)
chr5 (852-968)||(18136317-18136433)
chr5 (898-982)||(41800977-41801061)
chr5 (853-964)||(28857083-28857194)
chr5 (862-985)||(30995085-30995208)
chr5 (863-1005)||(13664225-13664367)
chr5 (857-959)||(28862784-28862886)
chr5 (852-945)||(1898955-1899048)
chr5 (852-985)||(5079285-5079418)
chr5 (867-976)||(35638062-35638171)
chr5 (862-1005)||(38897719-38897861)
chr5 (922-1005)||(42291505-42291588)
chr5 (852-1005)||(24498937-24499089)
chr5 (906-972)||(18262651-18262717)
chr5 (885-1018)||(40117402-40117535)
chr5 (915-1005)||(43399145-43399235)
chr5 (864-985)||(14974344-14974465)
chr5 (882-1005)||(7336604-7336726)
chr5 (921-985)||(18294504-18294568)
chr5 (922-985)||(3653934-3653997)
chr5 (914-1005)||(20255385-20255476)
chr5 (868-981)||(21487587-21487697)
chr5 (922-981)||(24463910-24463969)
chr5 (898-952)||(7736871-7736925)
chr5 (852-1005)||(14728036-14728190)
chr5 (853-890)||(6767166-6767203)
chr5 (850-891)||(18327722-18327763)
chr5 (881-1018)||(24653799-24653935)
chr5 (853-982)||(24875300-24875429)
chr5 (852-945)||(38297024-38297117)
chr5 (916-1001)||(39099783-39099868)
chr5 (856-976)||(14152008-14152128)
chr5 (853-945)||(16755016-16755108)
chr5 (853-888)||(28856932-28856967)
chr5 (852-977)||(1826811-1826937)
chr5 (921-971)||(35006769-35006819)
chr5 (956-1005)||(40773331-40773380)
[»] scaffold0006 (1 HSPs)
scaffold0006 (852-1003)||(68473-68621)
[»] scaffold0002 (3 HSPs)
scaffold0002 (856-1005)||(319382-319531)
scaffold0002 (853-1018)||(527-692)
scaffold0002 (853-940)||(412091-412178)
[»] scaffold0005 (2 HSPs)
scaffold0005 (853-972)||(271107-271226)
scaffold0005 (853-890)||(250128-250165)
[»] scaffold0011 (2 HSPs)
scaffold0011 (857-1005)||(224278-224426)
scaffold0011 (931-1005)||(186552-186626)
[»] scaffold0170 (1 HSPs)
scaffold0170 (858-985)||(9807-9934)
[»] scaffold0223 (1 HSPs)
scaffold0223 (868-1005)||(16851-16988)
[»] scaffold0016 (1 HSPs)
scaffold0016 (852-1005)||(8701-8863)
[»] scaffold0376 (1 HSPs)
scaffold0376 (853-1005)||(12627-12779)
[»] scaffold0209 (1 HSPs)
scaffold0209 (852-1005)||(12531-12682)
[»] scaffold0010 (1 HSPs)
scaffold0010 (911-1005)||(155711-155805)
[»] scaffold0291 (1 HSPs)
scaffold0291 (906-1018)||(6865-6977)
[»] scaffold0009 (1 HSPs)
scaffold0009 (853-1005)||(42832-42984)
[»] scaffold0341 (1 HSPs)
scaffold0341 (853-970)||(18589-18706)
[»] scaffold0635 (1 HSPs)
scaffold0635 (853-981)||(2114-2242)
[»] scaffold0086 (1 HSPs)
scaffold0086 (916-976)||(26203-26263)
[»] scaffold0001 (1 HSPs)
scaffold0001 (921-972)||(65185-65236)
[»] scaffold0155 (1 HSPs)
scaffold0155 (921-1005)||(19280-19364)


Alignment Details
Target: chr2 (Bit Score: 303; Significance: 1e-170; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 8 - 349
Target Start/End: Original strand, 2624912 - 2625254
Alignment:
Q  8 cacattacatttgatcattgcctaaatgtggcttggtacaacaatgatcaagatcttcattctatacctctcgtgtgactatggcagtgggagaggtgtc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2624912 cacattacatttgatcattgcctaaatgtggcttggtacaacaatgatcaagatcttcattctatacctctcgtgtgaatatggcagtgggagaggtgtc 2625011  T
Q  108 agtggcttatcatagtttagtgctacaactcttccataaactccatatggtaattgctactaataattgttattgtgttgccaacgtgtcaaataaatca 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2625012 agtggcttatcatagtttagtgctacaactcttccataaactccatatggtaattgctactaataattgttattgtgttgccaacgtgtcaaataaatca 2625111  T
Q  208 agagtgttgtcatgaaattgttagcattagggaggagcatttgaaaggtgtcataaatgccaactaacttccataaattagtagcctttgagctaac-aa 306  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||    
T  2625112 agagtgttgtcatcaaattgttaacattagggaggaacatttgaaaggtgtcataaatgccaattaacttccataaattagtagcctttgagcaaacaaa 2625211  T
Q  307 agaatgtatgcatttacgtttcaccaagatcacaagaagcata 349  Q
    | |||||||||||||||||||||||||||||||||||| ||||    
T  2625212 aaaatgtatgcatttacgtttcaccaagatcacaagaaacata 2625254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 437 - 617
Target Start/End: Original strand, 13061716 - 13061896
Alignment:
Q  437 aactagattgccgacccgtgcgctgcaccggtcctatggacggtaataaagaccaataactaatttttgatctcagatgaaatattgtcttagaaaaatg 536  Q
    |||||||| || ||| ||||||| |||| |||||||| ||| ||||||||||||||||| |||||||||||||||||| ||||||  || ||||||||||    
T  13061716 aactagatcgctgactcgtgcgccgcacgggtcctatcgactgtaataaagaccaataagtaatttttgatctcagataaaatataatcgtagaaaaatg 13061815  T
Q  537 tatatcatagaataaagaccaataaatcttatcgacctattttgccaacccgtacatttgattgtaatacaaaggaataaa 617  Q
    |||||||||||||||||| |||||| ||||| ||||||||||||||||||| |    |||||||||||| |||||||||||    
T  13061816 tatatcatagaataaagatcaataagtcttaccgacctattttgccaacccatgtgattgattgtaatataaaggaataaa 13061896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 2550822 - 2550974
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||||||||||||  ||||||||||| || | ||||||| |||| |||| ||||||||||||| ||| | |||||||||| ||||||    
T  2550822 ttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctcta 2550921  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| ||||||||||||||| |||  ||||||| | || ||||||||||||||    
T  2550922 cgcatgagccggattagtcgcccacttttggtgggttgaaaaccggtgcgaaa 2550974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 853 - 985
Target Start/End: Complemental strand, 42770803 - 42770671
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||| |||||||| |||||||||||| || |||||| || |||| ||||||||| |||||||||||||| ||||||||||  ||||     
T  42770803 ttgggctccagtggcaaagagctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatgcctctt 42770704  T
Q  953 tgcacgagccggattagtcgtccatctttggtg 985  Q
     ||||||||||||||| ||||||| ||||||||    
T  42770703 cgcacgagccggattaatcgtccacctttggtg 42770671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 853 - 1018
Target Start/End: Complemental strand, 18902682 - 18902517
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||  || | |||| || |||| |||| || | |||||||||||||  |||||||| | ||||||    
T  18902682 ttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctcta 18902583  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
     ||||||||| ||||||||| ||| |||||||| |  |||||||||||||||| ||| | ||||||    
T  18902582 cgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaagcaacaaaaaaaa 18902517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 7747228 - 7747380
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| ||||  ||||||||||||| |||| ||||| ||||  |||||    
T  7747228 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctcta 7747327  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| |||||||||||||||| || |||| ||| |  ||||||||||||||||    
T  7747328 cgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaa 7747380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 8410085 - 8410237
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||  ||   ||||||| |||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  8410085 ttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctcta 8410184  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||||||||||||||||||| |||  ||||| | |  ||||||||||||||||    
T  8410185 cgcacgagccggattagtcgcccacttttggggggtcggaaaccggtgcgaaa 8410237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 858 - 1005
Target Start/End: Complemental strand, 25540551 - 25540404
Alignment:
Q  858 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 957  Q
    ||||||||||||||||||| | ||||||||||||  | | ||||  | |||| ||||  ||| |||||||||||||| ||||||||||  ||||| ||||    
T  25540551 ctccagtggcaaggagctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcac 25540452  T
Q  958 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||||||||||| |||||||| |  ||||||||||||||||    
T  25540451 gagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 25540404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 20612688 - 20612534
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcagga-ggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||||||||||| ||||||  |||| || | |||| || |||| |||||||||| |||||||| ||||| ||||||||||  ||||    
T  20612688 ttgggctccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtgcgcatgcctct 20612589  T
Q  952 atgcacgagcc-ggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||| ||||| |||||||||||||| | |||||| |  ||||||||||||||||    
T  20612588 atgcatgagccgggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 20612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 859 - 1005
Target Start/End: Original strand, 41220595 - 41220741
Alignment:
Q  859 tccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacg 958  Q
    |||||||||||||||||||| |||||||||||  || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  ||||| ||| |    
T  41220595 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 41220694  T
Q  959 agccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||| ||||||||| || |||| ||| |  ||||||||||||||||    
T  41220695 agccgaattagtcgttcacctttagtgggtcggaaaccggtgcgaaa 41220741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 14169762 - 14169609
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||| ||||||| || | |||||||||||| || | ||||||| |||| |||||| || |||||||| ||||  |||||||||| |||||    
T  14169762 tttgggctccagtgacaaggagatctttccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgcatgtctct 14169663  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||||||||||||||||| | | |||||| |  ||||||||||||||||    
T  14169662 acgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaa 14169609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 853 - 985
Target Start/End: Complemental strand, 10026768 - 10026636
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||| ||||||||||||||| |||||||||||  ||  ||||| || |||| ||||||||| ||||||||| |||| ||||||||||  |||||    
T  10026768 ttgggctccaatggcaaggagctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctcta 10026669  T
Q  953 tgcacgagccggattagtcgtccatctttggtg 985  Q
     ||| ||||||||||||||| ||| ||||||||    
T  10026668 cgcatgagccggattagtcgaccacctttggtg 10026636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 868 - 1005
Target Start/End: Original strand, 10823029 - 10823166
Alignment:
Q  868 aaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggatt 967  Q
    ||||||||||| |||||||||||  || | |||| || |||  |||| ||||||||||||||||||| ||||||||||  ||||| ||||||||||||||    
T  10823029 aaggagctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggatt 10823128  T
Q  968 agtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||| ||| |||| ||| |  ||||||||||||||||    
T  10823129 agtcgcccaccttttgtgggtcggaaaccggtgcgaaa 10823166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 852 - 1001
Target Start/End: Original strand, 21286397 - 21286546
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||| |||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| |||| | |||||||||||  ||||||||||  ||||    
T  21286397 tttgagctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcatgcctct 21286496  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 1001  Q
    | |||||||| |||||||||   |||| |||||| | |||||||||||||    
T  21286497 acgcacgagctggattagtcactcatcattggtgggttggaaaccggtgc 21286546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 852 - 985
Target Start/End: Original strand, 38962716 - 38962849
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||||||||| ||||||||| |  ||||||||||| || | |||| || |||| ||| |||||||||||||||||||| ||||||||||  ||||    
T  38962716 tttggactccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatgcctct 38962815  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | ||| || |||||||||||||||| ||||||||    
T  38962816 acgcatgaaccggattagtcgtccacctttggtg 38962849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 857 - 985
Target Start/End: Original strand, 22593093 - 22593220
Alignment:
Q  857 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 956  Q
    |||||||||||||||||||||| |||||||||||  || | ||||  |||||| |||| |||| ||||||||| |||| ||||||||||  ||||| |||    
T  22593093 gctccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgcgcatgcctctacgca 22593191  T
Q  957 cgagccggattagtcgtccatctttggtg 985  Q
     ||||||||||||||||||| ||||||||    
T  22593192 tgagccggattagtcgtccacctttggtg 22593220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 852 - 982
Target Start/End: Original strand, 37560126 - 37560256
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||| ||| ||||||| |||||||||||  || | |||| |  |||| ||||||| | ||||||||| |||||||||||||||  ||||    
T  37560126 tttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgcatgcctct 37560225  T
Q  952 atgcacgagccggattagtcgtccatctttg 982  Q
    | ||||||||||||||| ||||||| |||||    
T  37560226 acgcacgagccggattaatcgtccacctttg 37560256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 38005355 - 38005508
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||||||||||  || | ||||  | |||| |||| || | |||||||||||||| ||||||||||  ||||    
T  38005355 tttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctct 38005454  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    |  || ||||||||||||||| ||| |||||||| ||| |||||| |||||||||    
T  38005455 acacatgagccggattagtcgcccacctttggtg-gatcggaaactggtgcgaaa 38005508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 853 - 1018
Target Start/End: Complemental strand, 3644039 - 3643874
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||| ||||||||| | |||||||||||| || | |||| || |||  |||   | |||||||||||||||| ||||||||||  |||||    
T  3644039 ttgggctccagtggaaaggagctcattccaaggacgtatccggggaataccgggtttgatttctacgaggaacaacgcttggccagtgcgcatgcctcta 3643940  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
     ||| |||| |||||||||||||| |||||||| |  |||||||| ||||||| ||| | ||||||    
T  3643939 cgcatgagctggattagtcgtccacctttggtgggccggaaaccgttgcgaaagcaaaaaaaaaaa 3643874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 12864177 - 12864330
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||| |||||||||||| |||| ||||||| || | |||| ||  ||| |||  |||| |||||||| ||||||||||||||||  ||||    
T  12864177 tttgggctccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgcgcatgcctct 12864276  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
      ||| ||||| ||||||||||||| | |||||| |  ||||||||||||||||    
T  12864277 gcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 12864330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 853 - 996
Target Start/End: Original strand, 331455 - 331598
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||| |||||| | |||||||||||  || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||   ||||    
T  331455 ttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttcta 331554  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaacc 996  Q
     ||| ||||||||||||||| ||| |||||||| | ||||||||    
T  331555 cgcatgagccggattagtcgcccacctttggtgggttggaaacc 331598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 853 - 1000
Target Start/End: Complemental strand, 39201660 - 39201513
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||  ||||||||||||||||| |||||||||||  || | |||| ||| ||| ||||||||| ||||||| | |||| ||||| ||||  |||||    
T  39201660 ttgggctatagtggcaaggagctccttccaaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgtgcatgcctcta 39201561  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtg 1000  Q
     ||| |||||||||||||||| || |||||||| |  |||||||||||    
T  39201560 cgcatgagccggattagtcgttcacctttggtgggtcggaaaccggtg 39201513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 852 - 982
Target Start/End: Original strand, 34722634 - 34722763
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||| |||||||||||| |||||||||||       ||||| | |||| |||||||||  |||||||||||||||||||| ||| |||||    
T  34722634 tttgggctccagtgacaaggagctccttccaaggacgtaccaaatgaatatgg-gttcgattctcagggagaacaacgcttggtcagtgcacatgtctct 34722732  T
Q  952 atgcacgagccggattagtcgtccatctttg 982  Q
    | ||||||||||||||||||| ||| |||||    
T  34722733 acgcacgagccggattagtcgcccacctttg 34722763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 2528494 - 2528341
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||| |||||||| |||||||||||  || | || | || |||| |||| |||| |||||||||||||||||||| ||||  ||||    
T  2528494 tttgggctccagtggcaatgagctccttccaaggacgtactcgaggaacaccgggttcgattcccagggggaacaacgcttggtcagtgtgcatgcctct 2528395  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |  ||  ||||||||||||||  ||||||| ||| |  |||||| |||||||||    
T  2528394 acacataagccggattagtcgctcatctttagtgagtcggaaactggtgcgaaa 2528341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 858 - 971
Target Start/End: Complemental strand, 13026558 - 13026445
Alignment:
Q  858 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 957  Q
    ||||||||||||||| ||||| |||||||||||| |  | ||||||| |||| ||| ||||||||||||| | |||| ||||||||||  ||||| |||     
T  13026558 ctccagtggcaaggaactccttccaaggacgtatccagggaatatcgggttcgattatcaggaggaacaatgattggccagtgcgcatgcctctacgcat 13026459  T
Q  958 gagccggattagtc 971  Q
    ||||||||||||||    
T  13026458 gagccggattagtc 13026445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 985
Target Start/End: Original strand, 24179524 - 24179654
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| |||||||| |||||||| |||||||||||  | |||| || || |||| ||||||||| ||||||||| |||| |||||| |||  ||||    
T  24179524 tttgggctctagtggcaaagagctccttccaaggacgtacccatgaa-taccg-gttcgattctcagg-ggaacaacgtttggccagtgcacatgcctct 24179620  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | ||| ||||||||||||||||||||||||||||    
T  24179621 acgcatgagccggattagtcgtccatctttggtg 24179654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 973
Target Start/End: Original strand, 34356159 - 34356280
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||  | ||||||||||||  | | |||| || |||| |||  |||| |||||||| ||||||||||||||||  ||||    
T  34356159 tttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgcgcatgcctct 34356258  T
Q  952 atgcacgagccggattagtcgt 973  Q
    ||||| ||||||||||| ||||    
T  34356259 atgcatgagccggattaatcgt 34356280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 41032057 - 41031906
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||   | |||  | || |||| |||| |||| |||||||| ||||| ||||| ||||  |||||    
T  41032057 ttgggctccagtggcaaggagctccttccaaggacgtaccagggaac-accgggttcgattcccagggggaacaacacttggccagtgtgcatgcctcta 41031959  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||||||||||||||||||  ||| |||||||| |  ||||||| ||||||||    
T  41031958 cgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcgaaa 41031906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 852 - 982
Target Start/End: Complemental strand, 19976960 - 19976830
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||| ||||| | |||||||||||| || | |||| || |||| ||| ||||| |||| |||| ||||||||||||||| |||||    
T  19976960 tttgggctccagtggcaagtagctctttccaaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgcatgtctct 19976861  T
Q  952 atgcacgagccggattagtcgtccatctttg 982  Q
    | |||  || || |||||||| ||| |||||    
T  19976860 acgcataagtcgaattagtcgcccacctttg 19976830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 28616533 - 28616379
Alignment:
Q  852 tttgggctccagtggcaa-ggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctc 950  Q
    ||||| |||||||| ||| ||| ||||| |||||||| ||| || | ||||||| |||| ||| ||||| |||| ||| ||||| ||||||||||  |||    
T  28616533 tttggactccagtgacaaaggaactccttccaaggacatatccgcggaatatcgggttcgattttcagggggaataacacttgggcagtgcgcatgcctc 28616434  T
Q  951 tatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    || ||||||||| ||||||||| |||||||| ||| |   |||||||||||||||    
T  28616433 tacgcacgagccagattagtcgcccatctttagtgggtcagaaaccggtgcgaaa 28616379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 853 - 1017
Target Start/End: Original strand, 44945548 - 44945712
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||| ||||||||||||||||| |||||||||||  ||   ||||  | |||  |||| ||| |||||||||||||||  |||||||||  |||||    
T  44945548 ttgggctcaagtggcaaggagctccttccaaggacgtactcggagaatactgggtttgattcccag-aggaacaacgcttggatagtgcgcatgcctcta 44945646  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa-ccaagataaaaa 1017  Q
     ||||||||||||||||||| ||| |||| ||| ||| |||||||||||||||| |||||| |||||    
T  44945647 cgcacgagccggattagtcgcccacctttagtg-gatcggaaaccggtgcgaaagccaagaaaaaaa 44945712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 856 - 1005
Target Start/End: Complemental strand, 16813313 - 16813165
Alignment:
Q  856 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 955  Q
    ||||||| || |||||||||||| |||||||||||  ||   |||| | ||||| | | ||||| ||||||||| |||  |||| |||||  ||||||||    
T  16813313 ggctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcagg-ggaacaacgtttgaccagtacgcatgcctctatgc 16813215  T
Q  956 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||||||||||||||||||||||  | |||||| | ||||||||    
T  16813214 acgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaa 16813165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 856 - 1005
Target Start/End: Complemental strand, 16852592 - 16852444
Alignment:
Q  856 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 955  Q
    ||||||| || |||||||||||| |||||||||||  ||   |||| | ||||| | | ||||| ||||||||| |||  |||| |||||  ||||||||    
T  16852592 ggctccactgacaaggagctccttccaaggacgtactcggagaataccaagttcaactttcagg-ggaacaacgtttgaccagtacgcatgcctctatgc 16852494  T
Q  956 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||||||||||||||||||||||  | |||||| | ||||||||    
T  16852493 acgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaa 16852444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 853 - 1018
Target Start/End: Original strand, 44139438 - 44139603
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||  |||| ||||| ||||||| | ||  | | |||| || |||| |||| |||| |||||||||||||| |||||||| |  |||||    
T  44139438 ttgggctccagtggtgaggaactccttccaaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctcta 44139537  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
     ||||||||||||||||||| ||| |  ||||| |  |||||||||||||||| ||| | ||||||    
T  44139538 cgcacgagccggattagtcgcccaccaatggtgggtcggaaaccggtgcgaaagcaaaaaaaaaaa 44139603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 852 - 985
Target Start/End: Complemental strand, 45263820 - 45263687
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||||||||||||  |||  |  ||| || | |||| || |||| |||| |||  |||||||||||||| ||||||||||  ||||    
T  45263820 tttgggctccagtggcaaggagctcctttcaaaaatttatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctct 45263721  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | ||||||||||||||| |||  |||||||||||    
T  45263720 acgcacgagccggattaatcgctcatctttggtg 45263687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 853 - 985
Target Start/End: Original strand, 7787010 - 7787142
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||| |||||  | ||||||||  || | |||| || |||| |||  |||| |||||||  ||||| |||| |||||  |||||    
T  7787010 ttgggctccagtggcaaggaactcctttctaggacgtacccggggaataccgggttcgatttccagggggaacaatacttggccagtacgcatgcctcta 7787109  T
Q  953 tgcacgagccggattagtcgtccatctttggtg 985  Q
     ||||||||||||||||||| ||||||||||||    
T  7787110 cgcacgagccggattagtcgcccatctttggtg 7787142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 859 - 1015
Target Start/End: Complemental strand, 31596578 - 31596422
Alignment:
Q  859 tccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacg 958  Q
    |||||||||||||||||||| |||| ||||||| |||  ||||||  |||||||| ||||| ||||||| | |||| |||||| ||||  |||| ||| |    
T  31596578 tccagtggcaaggagctccttccaaagacgtatccgtagaatatcaggttctattttcagggggaacaatgtttggccagtgcacatacttctacgcatg 31596479  T
Q  959 agccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaa 1015  Q
    ||| | |||| ||||| | ||||| ||   ||||||||||||||||| ||| |||||    
T  31596478 agctgaattaatcgtctacctttgatgaattggaaaccggtgcgaaagcaaaataaa 31596422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 35946693 - 35946844
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||| | |||| ||||||||| | | |||||||||| || | |||| ||||||| ||||  ||| |||||||||||||| || || ||||  |||||    
T  35946693 ttgggcttccgtggtaaggagctcattctaaggacgtatccggggaataccgagttcgattcctagg-ggaacaacgcttggccattgtgcatgcctcta 35946791  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||||||||||||||||||||||| | |||||| |  |||||| |||||||||    
T  35946792 cgcacgagccggattagtcgtccaccattggtgggtcggaaactggtgcgaaa 35946844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 641 - 688
Target Start/End: Original strand, 13061921 - 13061968
Alignment:
Q  641 ttagatgttaaataaaaagtagaatacaattgtattaacattaacata 688  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  13061921 ttagatgttaaataaaaagtggaatacaattgtattaacattaacata 13061968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 851 - 982
Target Start/End: Original strand, 25549680 - 25549811
Alignment:
Q  851 ttttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctc 950  Q
    |||||||||||||||||||||||||||| ||||| ||||||  | | ||||  | |||| ||||| |||   ||||||  ||||  ||||| |||  |||    
T  25549680 ttttgggctccagtggcaaggagctccttccaagtacgtatttggggaatactgggttcgattcttagggaaaacaacatttggctagtgcacatgcctc 25549779  T
Q  951 tatgcacgagccggattagtcgtccatctttg 982  Q
    || |||||||||||||||||||||||||||||    
T  25549780 tacgcacgagccggattagtcgtccatctttg 25549811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 898 - 1005
Target Start/End: Original strand, 27725939 - 27726046
Alignment:
Q  898 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccg 997  Q
    |||||||||||  ||||||||||||||||| |||||| ||||||||||  ||||| |||| |||||||||||||| ||| |  ||||| |  ||||||||    
T  27725939 aatatcgagtttgattctcaggaggaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaaccg 27726038  T
Q  998 gtgcgaaa 1005  Q
    ||| ||||    
T  27726039 gtgtgaaa 27726046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 854 - 972
Target Start/End: Original strand, 41187804 - 41187922
Alignment:
Q  854 tgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctat 953  Q
    |||||| | |||||||||||||||| |||||||||||| || | |||| ||| ||| ||||| ||||  |||||||||||  ||||||||||  |||||     
T  41187804 tgggcttcggtggcaaggagctccttccaaggacgtatccgaggaataccgaattcaattcttaggaaaaacaacgcttgaccagtgcgcatgcctctac 41187903  T
Q  954 gcacgagccggattagtcg 972  Q
    ||| ||| |||||||||||    
T  41187904 gcatgagacggattagtcg 41187922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 864 - 985
Target Start/End: Complemental strand, 3811832 - 3811711
Alignment:
Q  864 tggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccg 963  Q
    ||||||||| ||||| |||||||||||  || | ||||||| |||| |||| |||  |||||||| |||||||| |||||||  ||||| ||| ||||||    
T  3811832 tggcaaggaactccttccaaggacgtactcgaggaatatcgggttcgattcccagagggaacaacacttggtcaatgcgcatgcctctacgcatgagccg 3811733  T
Q  964 gattagtcgtccatctttggtg 985  Q
    ||||| ||| ||| ||||||||    
T  3811732 gattactcgcccacctttggtg 3811711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 852 - 985
Target Start/End: Complemental strand, 6358304 - 6358171
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||| ||||| | | |||||||||| || | |||| |   ||| |||  |||| |||||||| ||||| ||||||||||  ||||    
T  6358304 tttgggctccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagtgcgcatgcctct 6358205  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | ||| ||||||||||||||||||| | ||||||    
T  6358204 acgcatgagccggattagtcgtccaccattggtg 6358171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 856 - 1005
Target Start/End: Original strand, 11069835 - 11069984
Alignment:
Q  856 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 955  Q
    ||||||| |||| |||||||| | |||||||||||  || | |||| |  |||| ||||  ||| ||||||||| |||| ||||||||||| ||||| ||    
T  11069835 ggctccaatggctaggagctcattccaaggacgtacccggggaataccaggttcgattccgagggggaacaacgtttggccagtgcgcatacctctacgc 11069934  T
Q  956 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||| | |||||||||||| | |||||| |  |||||||| |||||||    
T  11069935 acgagctgaattagtcgtccaccgttggtgggtcggaaaccgatgcgaaa 11069984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 852 - 985
Target Start/End: Complemental strand, 39807038 - 39806905
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||||  ||||||  ||||||||||  || | |||| || |||| |||| || ||| ||||||| |||| ||||||||||  ||||    
T  39807038 tttgggctccagtggcaagatgctccttacaaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctct 39806939  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    |  |||||| |||||||||| |||| ||||||||    
T  39806938 acacacgagtcggattagtcatccacctttggtg 39806905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 853 - 985
Target Start/End: Complemental strand, 10046628 - 10046497
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||| ||||||||||||||| ||||| |||||| ||   |||| || |||| ||||||| | | ||||||| || | ||||||||||  |||||    
T  10046628 ttgggctccaatggcaaggagctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacg-tttgacagtgcgcatgcctcta 10046530  T
Q  953 tgcacgagccggattagtcgtccatctttggtg 985  Q
     ||| ||||||||||||||| ||| ||||||||    
T  10046529 cgcatgagccggattagtcgaccacctttggtg 10046497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 852 - 972
Target Start/End: Complemental strand, 21180467 - 21180347
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||||||||||  ||   |||| ||  ||| |||| || |  ||||||| ||||| |||||| |||  ||||    
T  21180467 tttgggctccagtggcaaggagctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgcacatgcctct 21180368  T
Q  952 atgcacgagccggattagtcg 972  Q
    | |||||||||||||||||||    
T  21180367 acgcacgagccggattagtcg 21180347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 922 - 1001
Target Start/End: Original strand, 10669615 - 10669694
Alignment:
Q  922 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 1001  Q
    ||||||||||||| |||||||||| |||||| ||||||| ||||||| |||| || |||||||| |  ||||||||||||    
T  10669615 gaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtcggaaaccggtgc 10669694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 852 - 982
Target Start/End: Original strand, 29422168 - 29422298
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||| |||||||||||||  ||||||||||  || | ||||  | |||| |||  |||  |||||||| ||||| || || ||||| || |    
T  29422168 tttgggctccagtagcaaggagctcctttcaaggacgtacccggggaatactgggttcgatttccagagggaacaacacttggccaatgagcataccttt 29422267  T
Q  952 atgcacgagccggattagtcgtccatctttg 982  Q
    | ||||||||||||||||||||||| |||||    
T  29422268 acgcacgagccggattagtcgtccacctttg 29422298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 18649179 - 18649026
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||| |||| || ||||||| | || |  | |||| ||  ||| |||||||||||||||||   |||| ||||||||||  ||||    
T  18649179 tttgggctccagtggcaagaagctgcttccaaggatgcattcagggaataccggattcgattctcaggaggaacaatatttgggcagtgcgcatgcctct 18649080  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||| |||||||||||  ||  ||||||| | ||||||||| |||||||    
T  18649079 acgcatgagtcggattagtcgctcacttttggtgggttggaaaccgttgcgaaa 18649026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 853 - 981
Target Start/End: Original strand, 10106542 - 10106670
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||| |||| ||||||| |||  ||| ||||||| || |||||| ||  ||| |||||||| |||||||||||||| | || ||||||   ||||    
T  10106542 ttgggctccggtggtaaggagcacctttcaaagacgtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttcta 10106641  T
Q  953 tgcacgagccggattagtcgtccatcttt 981  Q
    ||||  || ||||||||||||||| ||||    
T  10106642 tgcataagtcggattagtcgtccaccttt 10106670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 861 - 1005
Target Start/End: Original strand, 16034899 - 16035043
Alignment:
Q  861 cagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgag 960  Q
    |||||| ||||| ||||| |||||||||||| || | |||| || |||| ||| ||||| |||||||||||||  ||||| ||||  || || | |||||    
T  16034899 cagtggtaaggaactccttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgag 16034998  T
Q  961 ccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||||  || | ||| || |  ||||||||||||||||    
T  16034999 ccggattagtcgctcaccattgatgagtcggaaaccggtgcgaaa 16035043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 917 - 1005
Target Start/End: Complemental strand, 20116700 - 20116612
Alignment:
Q  917 aggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||||||| ||| || |||||||  ||||| ||| |||||||||||| |||||| ||||| || |  ||||||||||||||||    
T  20116700 aggaggaacaacgcatggccaatgcgcatgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgcgaaa 20116612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 852 - 932
Target Start/End: Complemental strand, 23500834 - 23500755
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgctt 932  Q
    |||||||||| |||||||||||||||| |||| ||||||| || | ||||||| |||| |||| |||||||||||| ||||    
T  23500834 tttgggctccggtggcaaggagctccttccaaagacgtat-cggggaatatcgggttcgattcccaggaggaacaaagctt 23500755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 866 - 1005
Target Start/End: Original strand, 2784900 - 2785038
Alignment:
Q  866 gcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccgga 965  Q
    |||| ||||||||  ||||||||||| || | |||| ||||||| ||| ||||| | |||||   |||||||||||||||  ||||| ||| ||| | ||    
T  2784900 gcaatgagctcctttcaaggacgtatccgaggaataccgagttcgattttcagg-gaaacaagatttggtcagtgcgcatgcctctacgcatgagtcaga 2784998  T
Q  966 ttagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||||| ||| || |  ||||||||||||||||    
T  2784999 ttagtcgtccatcattgatgagtcggaaaccggtgcgaaa 2785038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 906 - 1005
Target Start/End: Original strand, 16325602 - 16325701
Alignment:
Q  906 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| |||| |||| |||||||| ||||| ||||| ||||  ||||| ||| ||||| ||||||||||||| | |||||| |  ||||||||||||||||    
T  16325602 gttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 16325701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 1005
Target Start/End: Complemental strand, 9360830 - 9360748
Alignment:
Q  923 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||| |||| ||||||||||  ||||| |||||||||| |||||||| ||| |||| ||| |  ||||||||||||||||    
T  9360830 aacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttagtgggccggaaaccggtgcgaaa 9360748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 1005
Target Start/End: Original strand, 12455334 - 12455416
Alignment:
Q  923 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||| | ||||||||||  ||||| |||||||||||||||||||  || | |||||| |  ||||||||||||||||    
T  12455334 aacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcgaaa 12455416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 852 - 981
Target Start/End: Original strand, 5035241 - 5035370
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||| |||||| || | ||| |||||| ||  |||||| | |||| |||| ||| |  ||||| |||||  |||||||||| |||||    
T  5035241 tttgggctccagtggcacggagctgcttctaagaacgtatccggaaaatattgggttcgattcccagaaaaaacaatgcttgaccagtgcgcatgtctct 5035340  T
Q  952 atgcacgagccggattagtcgtccatcttt 981  Q
    | |||||| |||||||| || |||| ||||    
T  5035341 acgcacgaaccggattaatcatccaccttt 5035370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 923 - 1005
Target Start/End: Original strand, 29653651 - 29653728
Alignment:
Q  923 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||||| ||||||||||  ||||| |||||||||| |||||||| ||| ||||||||    ||||||||||||||||    
T  29653651 aacaacgcttgggcagtgcgcatgcctctacgcacgagccgaattagtcg-ccacctttggtg----ggaaaccggtgcgaaa 29653728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 14853520 - 14853366
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat--atct 949  Q
    ||||||||||||||||||||| |||||  |||||| |||| || | |||| |   ||| ||| ||||| ||||||||  |||| ||||||| ||   |||    
T  14853520 tttgggctccagtggcaaggaactcctttcaaggatgtatccggggaataccagattcgattttcagggggaacaacttttggccagtgcgtatgcctct 14853421  T
Q  950 ctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||  || ||| |||||||||||||||||||| ||| ||| |||| ||||||||||    
T  14853420 ctactcatgagtcggattagtcgtccatctttagtg-gatcgaaatcggtgcgaaa 14853366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 853 - 945
Target Start/End: Original strand, 33005706 - 33005797
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    |||||||||||||||||||||||| |  | ||||||||  |||| |||| || ||||| ||| |||| |||||||| ||||| ||||||||||    
T  33005706 ttgggctccagtggcaaggagctcatttctaggacgtacccgtggaataccgggttctgttcccagg-ggaacaacacttggccagtgcgcat 33005797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 853 - 945
Target Start/End: Complemental strand, 37805043 - 37804951
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    ||||||| |||||||||||| ||||| |||||||||||  || |||||| ||  ||| |||| |||| |||| |||||||||  |||||||||    
T  37805043 ttgggctacagtggcaaggaactcctcccaaggacgtacccgagaaataccggattcgattcacagggggaataacgcttggctagtgcgcat 37804951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 965 - 1005
Target Start/End: Original strand, 44023361 - 44023401
Alignment:
Q  965 attagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  44023361 attagtcgtccatctttggtgggttggaaaccggtgcgaaa 44023401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 852 - 919
Target Start/End: Original strand, 32028366 - 32028433
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcagg 919  Q
    ||||||||| |||||||||||||| || ||||||||||||  | |||||||||| ||| ||| |||||    
T  32028366 tttgggctctagtggcaaggagctgcttccaaggacgtatttgggaaatatcgaattcgattttcagg 32028433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 981
Target Start/End: Complemental strand, 28525537 - 28525479
Alignment:
Q  923 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 981  Q
    |||||| ||||| ||||||||||  ||||| |||||||||||||||||| |||| ||||    
T  28525537 aacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcatccaccttt 28525479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 247; Significance: 1e-136; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 438 - 818
Target Start/End: Complemental strand, 54929184 - 54928803
Alignment:
Q  438 actagattgccgacccgtgcgctgcaccggtcctatggacggtaataaagaccaataactaatttttgatctcagatgaaatattgtcttagaaaaatgt 537  Q
    |||||||||||||||||||||| |||| | |||||| ||| |||||||| | |||||| |||||||||||||||||||||||||| |||||||||||| |    
T  54929184 actagattgccgacccgtgcgccgcacggatcctatcgactgtaataaaaatcaataaataatttttgatctcagatgaaatattatcttagaaaaatat 54929085  T
Q  538 atatcatagaataaagaccaataaatcttatcgacctattttgccaacccgtacatttgattgtaatacaaaggaataaatgtacaaagtnnnnnnnnnn 637  Q
    ||||||||||||||||| |||||||||||||||| |||||||| |||| ||||| |||||||||||||||||  ||||||||||||||||              
T  54929084 atatcatagaataaagatcaataaatcttatcgatctattttgtcaactcgtacgtttgattgtaatacaaacaaataaatgtacaaagtaaaaaaagaa 54928985  T
Q  638 nnn-ttagatgttaaataaaaagtagaatacaattgtattaacattaacataattcaaaattagaaattcctgttattacagctgaaacgcctatgaaac 736  Q
        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||    
T  54928984 aaaattagatgttaaataaaaagtagaatacaattgtattaacattaacataattcaaaattagaaattccagtcattacagctgaaacacctatgaaac 54928885  T
Q  737 taaggaagagaaagagcaatgctatatggtgttatagatttctcacacgaacatgaacgaatgcatgaaaacatatatttaa 818  Q
    |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54928884 taaaaaagagaaagagcaatgctatatggtgttatagatttctcacacgaacatgaacgaatgcatgaaaacatatatttaa 54928803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 2e-43
Query Start/End: Original strand, 852 - 1040
Target Start/End: Complemental strand, 22405697 - 22405507
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||| ||  ||||||||||||||||||||||||||   || |||| ||  || |    
T  22405697 tttgggctccagtggcaaggagctcctaccaatgacgtatccgtgaaataccggattctattctcaggaggaacaacgcttaaccaatgcgaatgccttt 22405598  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa-ccaag-ataaaaaacgaagggaatcatgctagcttt 1040  Q
    ||||||||||||||||| |||||||||||||||| |  ||||||| |||| ||| ||||| |||||||||||||| | |||||||||||||    
T  22405597 atgcacgagccggattaatcgtccatctttggtgcgtcggaaaccagtgcaaaacccaagaataaaaaacgaaggaattcatgctagcttt 22405507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 461 - 617
Target Start/End: Complemental strand, 50466520 - 50466364
Alignment:
Q  461 gcaccggtcctatggacggtaataaagaccaataactaatttttgatctcagatgaaatattgtcttagaaaaatgtatatcatagaataaagaccaata 560  Q
    |||| |||||||| |||  |||||||||||||||| |||| ||| |||||| |||||||||| || |||||||||||||||||||||||| |||||||||    
T  50466520 gcacgggtcctatcgactataataaagaccaataagtaatctttaatctcaaatgaaatattatcgtagaaaaatgtatatcatagaatatagaccaata 50466421  T
Q  561 aatcttatcgacctattttgccaacccgtacatttgattgtaatacaaaggaataaa 617  Q
      ||||||| ||||||||| ||||||| ||  ||||||||||||| |||||||||||    
T  50466420 ggtcttatcaacctatttttccaacccatatgtttgattgtaatataaaggaataaa 50466364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 853 - 1002
Target Start/End: Original strand, 10040511 - 10040659
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| | |||||||||  || | ||||||| |||| ||||||||| |||||||||||||| ||||||||||  |||||    
T  10040511 ttgggctccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgattctcagg-ggaacaacgcttggccagtgcgcatgcctcta 10040609  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcg 1002  Q
     |||||||||||| | |||||||| |||||||| | ||||||||||||||    
T  10040610 cgcacgagccggaatggtcgtccacctttggtgggttggaaaccggtgcg 10040659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 25294914 - 25295066
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||  |||||| || | |||||| ||||| ||||||||||  |||||    
T  25294914 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgcatgcctcta 25295013  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| ||||||||||||||||||| | |||||| | |||||||||||||||||    
T  25295014 tgcatgagccggattagtcgtccaccattggtgggttggaaaccggtgcgaaa 25295066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 29762308 - 29762156
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| ||||||| |||| || | ||||||| || | ||||||||| | |||||| ||||| ||||||||||  |||||    
T  29762308 ttgggctccagtggcaaggagctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgcgcatgcctcta 29762209  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| |||| |||||||||||||| | |||||| |  ||||||||||||||||    
T  29762208 tgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 29762156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 54261179 - 54261332
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||||||||||   | | |||| || |||| ||||  |||||||||||||||||| ||||||||||  ||||    
T  54261179 tttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctct 54261278  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| |||||||||||||||| || |||| ||| |  ||||||||||||||||    
T  54261279 acgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaa 54261332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 29127872 - 29128025
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||||||| |||| ||||||||||||  | | ||||||| |||| |||  ||||  ||||||| ||||||||||||||||  ||||    
T  29127872 tttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgcgcatgcctct 29127971  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||||||||||||||| ||| |||||||| |  |||||||| |||||||    
T  29127972 acgcatgagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaa 29128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 6462366 - 6462518
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||| ||||||||||||||||| ||||||||||||  | | |||| || |||| |||| ||||  ||||||||||||| ||||||||||  |||||    
T  6462366 ttgggctctagtggcaaggagctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctcta 6462465  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| ||||||||||||||| ||||  || ||| | |||||||||||||||||    
T  6462466 cgcatgagccggattagtcgaccattattagtgggttggaaaccggtgcgaaa 6462518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 29135867 - 29136019
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||||||||| || |||||||||||| || | |||| ||  ||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  29135867 ttgggctccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctcta 29135966  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| |||||||||||||| |||| | |||||| | ||||||||||| |||||    
T  29135967 cgcatgagccggattagtcttccaccattggtgggttggaaaccggtacgaaa 29136019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 13893879 - 13894032
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||||||||| | || | |||| || |||  |||  |||| ||||||||||||||||| |||||||  ||||    
T  13893879 tttgggctccagtggcaaggagctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacgcttggtcaatgcgcatgcctct 13893978  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    |  |||||||||||||||||| ||| |||||||| ||| | ||||||||||||||    
T  13893979 acacacgagccggattagtcgcccacctttggtg-gatcgaaaaccggtgcgaaa 13894032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 48341973 - 48342126
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||||||||||   | | |||| || |||||||||  ||| ||||||||||||||  |||||||||  ||||    
T  48341973 tttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggttctattcctagggggaacaacgcttggctagtgcgcatgcctct 48342072  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    | ||| || || |||||||||||||||||||||| ||| |||||| |||||||||    
T  48342073 acgcatgaaccagattagtcgtccatctttggtg-gatcggaaacaggtgcgaaa 48342126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 51060435 - 51060282
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||||||||||||  ||||||| |||||||  ||| || | ||||||| |||| ||||||||| |||||||| ||||||||||||||||  ||||    
T  51060435 tttggactccagtggcaaatagctccttccaaggatctatccggggaatatcgggttcgattctcagggggaacaacacttggtcagtgcgcatgcctct 51060336  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| || | |||||||||||||| | |||||| |  ||||||||||||||||    
T  51060335 acgcatgaactggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 51060282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 852 - 1018
Target Start/End: Original strand, 49543472 - 49543638
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||  ||||||||||||||||| |||||||||||| |  | ||||||| |||| ||||||| | ||||||||| |||||||||| ||||  ||||    
T  49543472 tttgggctttagtggcaaggagctccttccaaggacgtatcccgggaatatcgggttcgattctcatggggaacaacgtttggtcagtgtgcatgcctct 49543571  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    | |||||||||| |||||||| ||| |||| ||| |  |||||| ||| ||||| ||| | ||||||    
T  49543572 acgcacgagccgaattagtcgcccacctttagtgggtcggaaactggtacgaaagcaaaaaaaaaaa 49543638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 15320139 - 15320292
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||||||||||||||||||||| |||||||||||  || | |||| || |||| |||   ||||||||||| | |||| ||||| ||||  ||||    
T  15320139 tttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgtgcatgcctct 15320238  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||||||||||||||||||| ||| |||||||| |   |||||||||||||||    
T  15320239 acgcacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaa 15320292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 35315909 - 35316062
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||| |||||||| |||||||||||  ||   ||||||| |||| |||| |||| |||||||| ||||| ||||||||||  ||||    
T  35315909 tttgggctccagtggcaaagagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctct 35316008  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| |||| |||||||||| |||  ||||||| |  |||||||| |||||||    
T  35316009 acgcatgagctggattagtcgcccacttttggtgggtcggaaaccgatgcgaaa 35316062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 853 - 984
Target Start/End: Original strand, 3755524 - 3755655
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||| |||||||||||| |||||| |  ||||||||||| || | |||| ||| ||| |||| |||||||||||||| |||  |||||||||| ||||||    
T  3755524 ttggactccagtggcaaagagctcttttcaaggacgtatccggggaataccgacttcgattcccaggaggaacaacgtttgaccagtgcgcatgtctcta 3755623  T
Q  953 tgcacgagccggattagtcgtccatctttggt 984  Q
     ||| ||||||||||||||||| | |||||||    
T  3755624 cgcatgagccggattagtcgtctacctttggt 3755655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 915 - 1005
Target Start/End: Original strand, 19146977 - 19147067
Alignment:
Q  915 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||||||||||||| ||||| | ||  |||||||||||||| |||||||||||||| |||||||| |  ||||||||||||||||    
T  19146977 tcaggaggaacaacgcttggccagtgtgtatccctctatgcacgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 19147067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 31072831 - 31072984
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||| |||||||||||||||  ||||||||||  ||   |||| |  |||| |||  |||| ||||||||||||||||||||| |||  ||||    
T  31072831 tttgggctccaatggcaaggagctcctttcaaggacgtacccggagaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctct 31072930  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | |||||| || ||||| ||||||| |||||||  | |||||||||||||||||    
T  31072931 acgcacgacccagattaatcgtccacctttggtaggttggaaaccggtgcgaaa 31072984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 45877407 - 45877560
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||| ||| |||||||||||| || | |||| || |||| |||  |||| | |||||| ||||| |||||| |||  ||||    
T  45877407 tttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgcacatgcctct 45877506  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| |||||||||||||||| || | ||| || |  ||||||||||||||||    
T  45877507 acgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgcgaaa 45877560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 869 - 1005
Target Start/End: Original strand, 53649697 - 53649833
Alignment:
Q  869 aggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggatta 968  Q
    |||||||||| |||||||||||| || | |||| || |||| |||||||||  ||||||| ||||| |||||||| | |||||| ||| |||||||||||    
T  53649697 aggagctccttccaaggacgtattcggggaataccgggttcgattctcagggtgaacaacacttggccagtgcgcctgtctctacgcatgagccggatta 53649796  T
Q  969 gtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    ||||| || ||||| || ||| ||||||||||||||||    
T  53649797 gtcgttcacctttgatg-gatcggaaaccggtgcgaaa 53649833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 857 - 1005
Target Start/End: Original strand, 7328802 - 7328949
Alignment:
Q  857 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 956  Q
    |||| |||||||||||| |||| |||||||||||  || |||||| || |||| |||| |||| |||||||| ||||| ||||||||||  || || |||    
T  7328802 gctctagtggcaaggagttccttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgca 7328900  T
Q  957 cgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||||||||||||||| ||| |||||||| |  | ||||||||||||||    
T  7328901 tgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcgaaa 7328949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 853 - 985
Target Start/End: Complemental strand, 30767400 - 30767268
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||||||| |||| ||||||| |||   | | ||||||| |||| |||  |||| |||||||| ||||| ||||| ||||  |||||    
T  30767400 ttgggctccagtggcaaggagttccttccaaggatgtacctggggaatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctcta 30767301  T
Q  953 tgcacgagccggattagtcgtccatctttggtg 985  Q
     ||||||||||||||||||| ||| ||||||||    
T  30767300 cgcacgagccggattagtcgcccacctttggtg 30767268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 881 - 1005
Target Start/End: Original strand, 54237430 - 54237554
Alignment:
Q  881 caaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 980  Q
    ||||||||||| || ||||||||| | || ||| |||||  ||||||| |||||||||||||||| |||||| ||| ||||||||| ||||||||| | |    
T  54237430 caaggacgtatccgggaaatatcggggtcgattttcagggagaacaacacttggtcagtgcgcatgtctctacgcatgagccggataagtcgtccaccat 54237529  T
Q  981 tggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| |  ||||||||||||||||    
T  54237530 tagtgggtcggaaaccggtgcgaaa 54237554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 898 - 1005
Target Start/End: Complemental strand, 34662427 - 34662320
Alignment:
Q  898 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccg 997  Q
    ||||||| |||| ||| |||||||||| |||| ||||||||| ||||| |||||||||| |||||| |||||||||||| |||| |||   |||||||||    
T  34662427 aatatcgggttcgattttcaggaggaataacgtttggtcagtacgcatgtctctatgcatgagccgaattagtcgtccacctttagtggattggaaaccg 34662328  T
Q  998 gtgcgaaa 1005  Q
     |||||||    
T  34662327 atgcgaaa 34662320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 853 - 972
Target Start/End: Original strand, 39849026 - 39849144
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||  |  | ||| ||| |||| |||| || |||||||||||||||| ||||| ||||  |||||    
T  39849026 ttgggctccagtggcaaggagctccttccaaggacgtactcagggaatttcgggttcgattccca-gaggaacaacgcttggccagtgtgcatgcctcta 39849124  T
Q  953 tgcacgagccggattagtcg 972  Q
     ||| |||||||||||||||    
T  39849125 cgcatgagccggattagtcg 39849144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 853 - 972
Target Start/End: Complemental strand, 42412927 - 42412808
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||| ||||||||||||||| |||||||||||| || | |||| || |||| |||| | || ||||||||||||||  ||||| |||  |||||    
T  42412927 ttgggctccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgcccatgcctcta 42412828  T
Q  953 tgcacgagccggattagtcg 972  Q
     ||| |||||||||||||||    
T  42412827 cgcatgagccggattagtcg 42412808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 853 - 1003
Target Start/End: Complemental strand, 26207954 - 26207804
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| ||||||| |||  || | |||| || |||| |||| || | |||||||||||||  ||||| ||||  |||||    
T  26207954 ttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgtgcatgcctcta 26207855  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcga 1003  Q
     ||| ||||||||||||||| ||||  || ||| |  ||||||||||||||    
T  26207854 cgcatgagccggattagtcggccattattagtgggtcggaaaccggtgcga 26207804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 853 - 983
Target Start/End: Complemental strand, 47303642 - 47303512
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||| |||| ||||||||  | |||||||||||| ||  |||||||| |||  |||| ||||||||||||| |||||||||||| |||  |||||    
T  47303642 ttgggctccggtggtaaggagctttttccaaggacgtatccggaaaatatcgggtttgattcccaggaggaacaacacttggtcagtgcacatgcctcta 47303543  T
Q  953 tgcacgagccggattagtcgtccatctttgg 983  Q
      || ||||||||||||||||| | ||||||    
T  47303542 cacatgagccggattagtcgtcaacctttgg 47303512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 3136847 - 3136695
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||| |||||||| |||||||  ||||||||||  || | |||| ||  ||| ||| ||||| |||||||| ||||| ||||||||||  ||||    
T  3136847 tttgggctcccgtggcaagaagctcctttcaaggacgtacccggggaataccggattcgattttcagg-ggaacaacacttgggcagtgcgcatgcctct 3136749  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||| ||||||||||||||| |||||||  |  ||||||||||||||||    
T  3136748 acgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgcgaaa 3136695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 916 - 1005
Target Start/End: Original strand, 7650244 - 7650333
Alignment:
Q  916 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| |||||||| ||||| |||| || || |||||| ||||||||||||||||||| ||| |||||||| | |||||||||||||||||    
T  7650244 cagggggaacaacacttggccagtacgaatgtctctacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaa 7650333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 852 - 985
Target Start/End: Original strand, 49198304 - 49198437
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||| ||||||| | || |||||||| ||| || | |||| || |||| ||||  ||| |||||||| ||||| ||||||||||  ||||    
T  49198304 tttgggctccagtgacaaggagtttcttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctct 49198403  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | ||| ||||||||||||||||||| | ||||||    
T  49198404 acgcatgagccggattagtcgtccaccattggtg 49198437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 51683108 - 51682955
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||| |||||||||| |||| ||||||| || | |||| |  |||| |||| |||| |||||||||||||  ||||||||||  ||||    
T  51683108 tttgggctccagtggcgaggagctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctct 51683009  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
       |||||||||||||||||| ||| |  ||||| |  ||||||| ||||||||    
T  51683008 ccacacgagccggattagtcgcccaccaatggtgggtcggaaaccagtgcgaaa 51682955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 852 - 976
Target Start/End: Original strand, 3763004 - 3763127
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||| |||| |||| ||| ||||||||  ||||||||||| || |||||| ||  ||| |||| ||| ||||||||||||||||||||| |||| |||||    
T  3763004 tttgagctctagtgacaaagagctcctttcaaggacgtatccgggaaataccggattcgattcacag-aggaacaacgcttggtcagtgtgcatgtctct 3763102  T
Q  952 atgcacgagccggattagtcgtcca 976  Q
    | |||||| | ||||||||||||||    
T  3763103 acgcacgaactggattagtcgtcca 3763127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 857 - 1005
Target Start/End: Complemental strand, 28572360 - 28572212
Alignment:
Q  857 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 956  Q
    ||||||||||||||||||||||  |||| ||| |  || | ||||  | |||| |||| |||| | |||||||||||| ||||  ||||  ||||| |||    
T  28572360 gctccagtggcaaggagctcctttcaagaacgcacccggggaatactgggttcgattcccaggggaaacaacgcttggccagtatgcatgcctctacgca 28572261  T
Q  957 cgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  28572260 cgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 28572212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 852 - 984
Target Start/End: Complemental strand, 41630666 - 41630534
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||| |||||||||||| ||| |||||||  ||  ||||| || |||| |||| || | |||||||||||||  ||||||||||  ||||    
T  41630666 tttgggctccagtgacaaggagctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgcgcatgcctct 41630567  T
Q  952 atgcacgagccggattagtcgtccatctttggt 984  Q
    |  || ||||||||||||||| ||| |||||||    
T  41630566 acacatgagccggattagtcgcccacctttggt 41630534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 641 - 688
Target Start/End: Complemental strand, 50466336 - 50466289
Alignment:
Q  641 ttagatgttaaataaaaagtagaatacaattgtattaacattaacata 688  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  50466336 ttagatgttaaataaatagtagaatacaattgtattaacattaacata 50466289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 852 - 982
Target Start/End: Original strand, 10855337 - 10855466
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| ||||||| |||   | |||||| || |||  |||  |||| |||||||||||||| |||| |||||  ||||    
T  10855337 tttgggctccagtggcaaggagctccttccaaggatgtacttgggaaataccgggtttgatttccagggggaacaacgcttggccagtacgcatgcctct 10855436  T
Q  952 atgcacgagccggattagtcgtccatctttg 982  Q
    | |||||| ||| |||||||| |||||||||    
T  10855437 acgcacgaaccgaattagtcg-ccatctttg 10855466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 871 - 972
Target Start/End: Complemental strand, 15795628 - 15795528
Alignment:
Q  871 gagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 970  Q
    |||||||| |||||||||||  || | |||| ||||||| |||| |||| |||||||||||||||||||||||||  ||||| |||||||| | ||||||    
T  15795628 gagctccttccaaggacgtacccggggaataccgagttcgattcccagg-ggaacaacgcttggtcagtgcgcatgcctctacgcacgagctgaattagt 15795530  T
Q  971 cg 972  Q
    ||    
T  15795529 cg 15795528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 47749258 - 47749106
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||| || ||||| || |||||||||||| |  | |||| || |||| ||||  ||| |||||||| ||||| ||||||||||  ||||    
T  47749258 tttgggctccagtggtaatgagcttcttccaaggacgtatccagggaataccgggttcgattcctagg-ggaacaactcttggccagtgcgcatgcctct 47749160  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | |||||||||| |||||||| ||| |||||||  |  |||||||| |||||||    
T  47749159 acgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaaa 47749106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 852 - 945
Target Start/End: Original strand, 49082777 - 49082870
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    ||||||||||||||||| ||||||||| | |||||||||| || | |||| ||||||| |||| ||||  ||||||||||| | ||||||||||    
T  49082777 tttgggctccagtggcagggagctccttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcat 49082870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 869 - 974
Target Start/End: Complemental strand, 52364937 - 52364832
Alignment:
Q  869 aggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggatta 968  Q
    |||||||||| |||||||||||  || | |||| ||||||| |||| ||| ||||||||||||||  ||||||||||  ||||| |||||||| ||||||    
T  52364937 aggagctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgcacgagctggatta 52364838  T
Q  969 gtcgtc 974  Q
     |||||    
T  52364837 atcgtc 52364832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 921 - 1005
Target Start/End: Complemental strand, 3507618 - 3507534
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||| ||||| ||||||||||  ||||| |||||||||||||||||||  || |||||||| |  ||||||||||||||||    
T  3507618 ggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 3507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 852 - 976
Target Start/End: Original strand, 33251615 - 33251739
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||| ||||||| |||||||| ||||||||||||  | | |||| || |||| |||| | |  ||||||||| |||| ||||| ||||  ||||    
T  33251615 tttgggctccggtggcaatgagctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgtgcatgcctct 33251714  T
Q  952 atgcacgagccggattagtcgtcca 976  Q
    | ||| |||||||||||||||||||    
T  33251715 acgcatgagccggattagtcgtcca 33251739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 861 - 1005
Target Start/End: Original strand, 47219106 - 47219250
Alignment:
Q  861 cagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgag 960  Q
    |||||| || |||||| | |||||||||||| || | |||| |  |||| |||| || | | ||||||||||||  |||||||||  ||||| ||| |||    
T  47219106 cagtggtaatgagctctttccaaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgag 47219205  T
Q  961 ccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||||||||| ||||| || |  ||||||||||||||||    
T  47219206 ccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaa 47219250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 921 - 982
Target Start/End: Original strand, 30045843 - 30045904
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 982  Q
    |||||||||||||| |||||||||| |||||| ||||||| | ||||||||||||| |||||    
T  30045843 ggaacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttg 30045904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 852 - 933
Target Start/End: Complemental strand, 30735099 - 30735018
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttg 933  Q
    ||||||||| ||||||||||||||| | ||||||||| |  || | |||| ||||||| ||||||||| |||||||||||||    
T  30735099 tttgggctctagtggcaaggagctcattccaaggacgcactcggggaataccgagttcgattctcagggggaacaacgcttg 30735018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 906 - 970
Target Start/End: Original strand, 4638161 - 4638225
Alignment:
Q  906 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 970  Q
    |||| |||| |||||| |||||||||||  ||||||||||| ||||| |||||||||||||||||    
T  4638161 gttcgattcccaggagaaacaacgcttgaccagtgcgcatacctctacgcacgagccggattagt 4638225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 7310856 - 7310704
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||| ||||||| |||||||| ||||| |||||   | | |||| || |||| |||| |||  |||||||| ||||  | ||| ||||  |||||    
T  7310856 ttgggctccggtggcaatgagctccttccaagaacgtacctgaggaataccgggttcgattcccagtgggaacaacacttgcccggtgtgcatgcctcta 7310757  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     |||||||||||||||||||  ||||||||||| |  |||||||| |||||||    
T  7310756 cgcacgagccggattagtcgctcatctttggtgggtcggaaaccgatgcgaaa 7310704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 915 - 982
Target Start/End: Original strand, 7648756 - 7648823
Alignment:
Q  915 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 982  Q
    ||||| ||||||||| |||  ||||||||||| ||||| ||||||||||||||||||| ||| |||||    
T  7648756 tcagggggaacaacgtttgaccagtgcgcatacctctacgcacgagccggattagtcgcccacctttg 7648823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 853 - 968
Target Start/End: Original strand, 41219547 - 41219661
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||| || |||| |||||||| | |||||||||| || ||| || | ||||| ||||||||||||||||||| |||| ||||||| ||  ||||     
T  41219547 ttgggctcccgttgcaatgagctccttctaaggacgtatacgggaa-taccaagttcgattctcaggaggaacaacgtttggccagtgcgtatgcctctg 41219645  T
Q  953 tgcacgagccggatta 968  Q
     |||||||| ||||||    
T  41219646 cgcacgagctggatta 41219661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 911 - 985
Target Start/End: Original strand, 928612 - 928686
Alignment:
Q  911 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 985  Q
    ||||||||| |||||||| ||||  ||||||||||  | ||| |||||||||||||||||| |||| ||||||||    
T  928612 attctcagggggaacaacacttgaccagtgcgcatgccgctacgcacgagccggattagtcatccacctttggtg 928686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 26362119 - 26361968
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| |||||||| ||| |||||||| ||||||||||   || | ||||||  |||  |||| || | ||||||||| |||||||||| ||||  ||||    
T  26362119 tttggactccagtgacaatgagctccttccaaggacgtt--cgaggaatatcaggtttgattcccaaggggaacaacgtttggtcagtgtgcatgcctct 26362022  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | |||||||||||||||||||  || ||||| || |  ||||||||||| ||||    
T  26362021 acgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaa 26361968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 852 - 982
Target Start/End: Complemental strand, 35923777 - 35923647
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| |||||||| |||||| | |||||||||||   |   |||| |  |||| ||||  ||| ||||||||| |||| ||||||||||  ||||    
T  35923777 tttgggctctagtggcaatgagctcattccaaggacgtacctggagaataccaggttcgattcatagggggaacaacgtttggccagtgcgcatgcctct 35923678  T
Q  952 atgcacgagccggattagtcgtccatctttg 982  Q
    | ||||||| || ||||||||||||||||||    
T  35923677 aagcacgagtcgaattagtcgtccatctttg 35923647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 852 - 945
Target Start/End: Complemental strand, 7613080 - 7612987
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    ||||| || |||||||||||||||||| |||||||||||   | | |||| || |||| |||| |||| ||||||||||||||  |||||||||    
T  7613080 tttggacttcagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcccagggggaacaacgcttggctagtgcgcat 7612987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 852 - 945
Target Start/End: Complemental strand, 11687263 - 11687170
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    ||||||||||||||||||| ||||||| |||||||||||   |   |||| || |||  ||||||||| ||||||| |||||| ||||||||||    
T  11687263 tttgggctccagtggcaagaagctccttccaaggacgtacctggagaataccgggtttgattctcagggggaacaatgcttggccagtgcgcat 11687170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 936 - 1005
Target Start/End: Complemental strand, 49021273 - 49021204
Alignment:
Q  936 cagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||  ||||| ||| ||||||||||||||||||| | |||||| |  ||||||||||||||||    
T  49021273 cagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 49021204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 921 - 985
Target Start/End: Original strand, 8164575 - 8164639
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 985  Q
    |||||||||||||| ||||||||||  || || ||||||| ||||||||||| ||| ||||||||    
T  8164575 ggaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtg 8164639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 853 - 945
Target Start/End: Complemental strand, 37092658 - 37092566
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    ||||||||||||||||||||||| || |||||||||||  |||| |||||||  ||  |||  || | ||||||||| |||| ||||||||||    
T  37092658 ttgggctccagtggcaaggagcttcttccaaggacgtacccgtggaatatcggattagatttccaaggggaacaacgtttggccagtgcgcat 37092566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 898 - 1005
Target Start/End: Original strand, 22909783 - 22909889
Alignment:
Q  898 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccg 997  Q
    ||||||| |||| |||||||| |||||||||||| ||  ||||||||||  |||| ||| |||||| ||||||||| || ||||| || |  |||||||     
T  22909783 aatatcgggttcgattctcag-aggaacaacgctaggctagtgcgcatacttctacgcatgagccgaattagtcgtgcacctttgatgggtcggaaacca 22909881  T
Q  998 gtgcgaaa 1005  Q
    ||||||||    
T  22909882 gtgcgaaa 22909889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 954 - 1005
Target Start/End: Complemental strand, 36043726 - 36043675
Alignment:
Q  954 gcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  36043726 gcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 36043675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 863 - 1005
Target Start/End: Complemental strand, 37320033 - 37319890
Alignment:
Q  863 gtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcagga-ggaacaacgcttggtcagtgcgcatatctctatgcacgagc 961  Q
    ||||||||||| || | |||||||||||  || |||||||||| ||  |||||||||| | |||||||||||   |||| ||||  ||||| ||||||||    
T  37320033 gtggcaaggagttcattccaaggacgtacacgagaaatatcgaatttgattctcaggatgaaacaacgcttgacaagtgtgcatgcctctacgcacgagc 37319934  T
Q  962 cggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     | |||| ||||||| | ||| || | ||||||| |||||||||    
T  37319933 tgaattaatcgtccaccgttgatgggttggaaactggtgcgaaa 37319890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 852 - 890
Target Start/End: Complemental strand, 32873702 - 32873664
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgta 890  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  32873702 tttgggctccagtggcaaggagctcattccaaggacgta 32873664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 985
Target Start/End: Complemental strand, 43330815 - 43330753
Alignment:
Q  923 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 985  Q
    |||||| ||||  ||||||||||  ||||| ||||||||||||||||||| ||| ||||||||    
T  43330815 aacaacacttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtg 43330753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 852 - 890
Target Start/End: Complemental strand, 46530024 - 46529986
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgta 890  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  46530024 tttgggctccagtggcaaggagctcctttcaaggacgta 46529986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 923 - 1001
Target Start/End: Complemental strand, 50405686 - 50405608
Alignment:
Q  923 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 1001  Q
    |||||||||||  ||||||||||  ||||| ||||||| ||||||||||| ||| | |||||| |  ||||||||||||    
T  50405686 aacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtgc 50405608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 948 - 981
Target Start/End: Original strand, 19873421 - 19873454
Alignment:
Q  948 ctctatgcacgagccggattagtcgtccatcttt 981  Q
    ||||| ||||||||||||||||||||||||||||    
T  19873421 ctctacgcacgagccggattagtcgtccatcttt 19873454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 906 - 1018
Target Start/End: Complemental strand, 26590366 - 26590254
Alignment:
Q  906 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaa 1004  Q
    |||| ||||||||| |||||||||||||||||||| ||||  |||||  |||||||  ||||| |||  | | ||||||| ||| |||||||||||||||    
T  26590366 gttcgattctcagggggaacaacgcttggtcagtgtgcatgcctctacacacgagctagattaatcgatcgtatttggtg-gatcggaaaccggtgcgaa 26590268  T
Q  1005 accaagataaaaaa 1018  Q
    | ||| | ||||||    
T  26590267 agcaaaaaaaaaaa 26590254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 921 - 1018
Target Start/End: Complemental strand, 55069764 - 55069667
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    ||||||||| |||| |||||| |||  ||||| ||||||||||||||| |||  || |||||||| |  |||||||||||| ||| ||| | ||||||    
T  55069764 ggaacaacgtttggccagtgcacatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtgcaaaagcaaaaaaaaaaa 55069667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 4e-35; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 2467270 - 2467118
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||  |||| |||||||| ||||| |||||||||| ||||||    
T  2467270 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgcgcatgtctcta 2467171  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| |||||||||||||||||||   ||||||||  ||||||||||||||||    
T  2467170 tgcatgagccggattagtcgtccacaattggtgtgtcggaaaccggtgcgaaa 2467118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 852 - 973
Target Start/End: Original strand, 6100429 - 6100550
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||| ||||||||||||||||||  ||||||||||| || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  | ||    
T  6100429 tttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgccact 6100528  T
Q  952 atgcacgagccggattagtcgt 973  Q
    | ||| ||||||||||||||||    
T  6100529 acgcatgagccggattagtcgt 6100550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 43032858 - 43033011
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||||||| |||| ||||  | ||||  | |||||||||  ||| |||| |||| |||||||||||||| ||||||||||  ||||    
T  43032858 tttgggctccagtggcaaggagttccttccaaaaatgtatctgggaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatgcctct 43032957  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |  |||||||||||||||||| ||| |||||||| |   |||||||||||||||    
T  43032958 acacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaa 43033011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 15884707 - 15884556
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||| ||||||||||| |||||||||||   | | |||| || |||| |||| |||| |||||||| |||||  |||||||||  |||||    
T  15884707 ttgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattcccagg-ggaacaacacttggcaagtgcgcatgcctcta 15884609  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||||||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  15884608 cgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 24837200 - 24837352
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| ||||| |||||  || | |||| || |||| |||| ||||  ||||||||||||| |||||  |||  |||||    
T  24837200 ttgggctccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgttcatgcctcta 24837299  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
     |||||||| |||||||||||||| |||||||| ||| |||||| |||||||||    
T  24837300 agcacgagcaggattagtcgtccacctttggtg-gatcggaaactggtgcgaaa 24837352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 10927564 - 10927716
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||| ||||||||||||||| ||  ||||||||||  || | |||| || |||| ||||  |||||||||||||||||| ||||||||||  |||||    
T  10927564 ttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctcta 10927663  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| |||||||||||||||| || |||| ||| |  |||||||| |||||||    
T  10927664 cgcatgagccggattagtcgttcacctttagtgggtcggaaaccgatgcgaaa 10927716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 17981399 - 17981551
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| ||||||| |||  || |||||| || |||| |||| |||| |||||||| ||||  ||||| ||||  |||||    
T  17981399 ttgggctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgcctcta 17981498  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||||||| || |||||| | ||| |||||||| |  ||||||||||||||||    
T  17981499 cgcacgagtcgaattagttgcccagctttggtgagtcggaaaccggtgcgaaa 17981551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 852 - 978
Target Start/End: Original strand, 13085481 - 13085607
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||| |||||||||| |||||||||||| || | |||| || |||| ||||||||  ||||||||| || | ||||| ||||| ||||    
T  13085481 tttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgtgcatacctct 13085580  T
Q  952 atgcacgagccggattagtcgtccatc 978  Q
    | ||||||||| ||||| ||| |||||    
T  13085581 acgcacgagccagattaatcgcccatc 13085607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 3418666 - 3418513
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| |||| |||||||||||||||| ||||||||||||  | | ||||||| |||| ||| | |||||||||||| ||||| ||||||||||   |||    
T  3418666 tttggactcccgtggcaaggagctccttccaaggacgtatctggggaatatcgggttcgatttttaggaggaacaacacttggccagtgcgcatgcgtct 3418567  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||| | ||||||||||||| |||| ||| |   |||||||||||||||    
T  3418566 acgcatgagtcagattagtcgtccacctttagtgggtcagaaaccggtgcgaaa 3418513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 985
Target Start/End: Original strand, 8141059 - 8141192
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||||||||| || |||||||||||| || | |||| || |||| |||  |||| | |||||||||||| ||||||||||  ||||    
T  8141059 tttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgcgcatgcctct 8141158  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | ||| |||| | ||||||||||||  |||||||    
T  8141159 acgcatgagctgaattagtcgtccacatttggtg 8141192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 985
Target Start/End: Original strand, 18373967 - 18374100
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||| ||||||||||||| | |||| ||  ||| || |||||| |  |||| |||||||||  ||||||||||||  ||||||||||  ||||    
T  18373967 tttgggctccaatggcaaggagctcattccaaagatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctct 18374066  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | ||| ||||||||||||||||||| ||||||||    
T  18374067 acgcatgagccggattagtcgtccaactttggtg 18374100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 14666223 - 14666071
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||| | |||||||||||| || | |||| || |||| |||| |||| | |||||| ||||| ||||||||||  |||||    
T  14666223 ttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctcta 14666124  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     |||| |||| ||||||||| |||   |||||| |  | ||||||||||||||    
T  14666123 cgcacaagccagattagtcgcccacagttggtgggtcgaaaaccggtgcgaaa 14666071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 880 - 984
Target Start/End: Original strand, 22958755 - 22958859
Alignment:
Q  880 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 979  Q
    |||||||||||   ||| |||||||| ||| ||| ||||  ||||||| |||||||||||| |||| |||||||||| ||||||||||||||||||| ||    
T  22958755 ccaaggacgtacctgtggaatatcgaattcgattttcagagggaacaatgcttggtcagtgtgcatgtctctatgcatgagccggattagtcgtccacct 22958854  T
Q  980 ttggt 984  Q
    |||||    
T  22958855 ttggt 22958859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 865 - 985
Target Start/End: Complemental strand, 36914573 - 36914453
Alignment:
Q  865 ggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccgg 964  Q
    |||||| ||||||| | |||||||||  || |||||||||| ||| ||| ||||||||||||||||||| ||||||| |||||| ||||||| |||  ||    
T  36914573 ggcaagaagctccttctaaggacgtactcgggaaatatcgaattcgattttcaggaggaacaacgcttgatcagtgcacatatcactatgcatgagttgg 36914474  T
Q  965 attagtcgtccatctttggtg 985  Q
    ||||||| |||| | ||||||    
T  36914473 attagtcatccaccattggtg 36914453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 852 - 1018
Target Start/End: Original strand, 43027262 - 43027428
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||| |||||| |  |||| ||||||  | | ||||  | |||| |||| |||||||||||||| |||  || |||||||  ||||    
T  43027262 tttgggctccagtggcaatgagctcatttcaagaacgtatttggggaatactgggttcgattcccaggaggaacaacgattgtccaatgcgcatgcctct 43027361  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    | ||| ||||||||||||||||||||||||| || |  |||||||| ||||||| ||| | ||||||    
T  43027362 acgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcgaaagcaaaaaaaaaaa 43027428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 853 - 966
Target Start/End: Original strand, 13358980 - 13359093
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||| |||||| ||||||||||| |||| || || | ||  ||||| || |||| |||||||| ||||||||||||||| ||||||||||| |||||    
T  13358980 ttgggcttcagtggtaaggagctccttccaaagatgtgtccggaaaataccgggttcgattctcagaaggaacaacgcttggacagtgcgcatacctcta 13359079  T
Q  953 tgcacgagccggat 966  Q
     ||||||| |||||    
T  13359080 cgcacgagtcggat 13359093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 14846533 - 14846685
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||| ||||||| ||||||| | |||||||||  || | |||| || |||| ||||||||| ||||||| | |||||||||||||||  ||||    
T  14846533 tttgggctccactggcaagaagctccttctaaggacgtacccggggaataccgggttcgattctcagg-ggaacaatgattggtcagtgcgcatgcctct 14846631  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||| | ||| ||||||||| |||||||| |  ||||| ||||||||||    
T  14846632 acgcatgagtcagataagtcgtccacctttggtgggtcggaaatcggtgcgaaa 14846685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 853 - 962
Target Start/End: Complemental strand, 38922566 - 38922457
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||  || | |||| || |||| |||| |||  |||||||||||||| ||||||||||  || ||    
T  38922566 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgccttta 38922467  T
Q  953 tgcacgagcc 962  Q
     |||||||||    
T  38922466 cgcacgagcc 38922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 853 - 1018
Target Start/End: Original strand, 45521127 - 45521291
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||||||| || | ||||||| |||  || | |||| || |||| |||| |||| |||||||| |||| |||||||||||  |||||    
T  45521127 ttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcgattcccagg-ggaacaacacttgatcagtgcgcatgcctcta 45521225  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
     ||| |||||||||||||||  || ||||| || |  |||||||||||||||| ||| | ||||||    
T  45521226 cgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcgaaagcaaaaaaaaaaa 45521291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 921 - 1005
Target Start/End: Complemental strand, 4479380 - 4479296
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||||||| ||||||||||  ||||| ||| |||| |||||||||||||| |||||||| |  ||||||||||||||||    
T  4479380 ggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4479296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 852 - 968
Target Start/End: Complemental strand, 44893431 - 44893315
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||||||||||  || | |||| || |||| |||   ||| ||||||| |||||| ||||| ||||  ||||    
T  44893431 tttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgtgcatgcctct 44893332  T
Q  952 atgcacgagccggatta 968  Q
    | |||||||||||||||    
T  44893331 acgcacgagccggatta 44893315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 583771 - 583922
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| |||||||||||||| || |||||||||||  || |||||| || |||| ||||  ||  |||||||||||||  ||||||||||  ||||    
T  583771 tttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctag--ggaacaacgcttgaccagtgcgcatgcctct 583868  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||| ||||||||||| ||| ||||| ||   | |||||||||||||||    
T  583869 acgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaaa 583922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 852 - 1001
Target Start/End: Complemental strand, 68251 - 68102
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||| ||||| |||||||||||||||| ||||||||||   || | || |||| |||| ||||||||||||||||||| |||| ||||  ||||  || |    
T  68251 tttgagctccggtggcaaggagctccttccaaggacgtgctcggggaagatcgggttcgattctcaggaggaacaacgtttggccagtatgcatgccttt 68152  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 1001  Q
    |  |||||||||||||| |||| || ||||| || |  ||||||||||||    
T  68151 acacacgagccggattaatcgttcacctttgatgggtcggaaaccggtgc 68102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 10535556 - 10535404
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||||||||||||||||||||| |||||||||||| || | ||||    |||| ||| ||||| |||||| ||||||  |||||||||| ||||     
T  10535556 tttggactccagtggcaaggagctccttccaaggacgtatccgaggaatacatggttcaattttcagg-ggaacaccgcttgaccagtgcgcatgtctcc 10535458  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| |||||| ||||||||| || |||||||  |  |||||| |||||||||    
T  10535457 acgcatgagccgaattagtcgttcacctttggtaagtcggaaactggtgcgaaa 10535404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 852 - 945
Target Start/End: Original strand, 22810037 - 22810129
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||   || |||| |||| |||| | || |||||||||||||||||||||||||    
T  22810037 tttgggctctagtggcaaggagctccttccaaggacgtatccggagaacatcgggttcgattccctgg-ggaacaacgcttggtcagtgcgcat 22810129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 852 - 981
Target Start/End: Complemental strand, 33401952 - 33401823
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||||||||||||  ||||||||||  || | |||| || |||| ||| ||||| |||||||| ||||  ||||| ||||  ||||    
T  33401952 tttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcatgcctct 33401853  T
Q  952 atgcacgagccggattagtcgtccatcttt 981  Q
    | ||| ||| ||||||||||| ||| ||||    
T  33401852 acgcatgagtcggattagtcgcccaccttt 33401823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 853 - 973
Target Start/End: Complemental strand, 1013129 - 1013009
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||  | |||||||||||| || | |||| || |||| |||| |||| |||||||||||||| |||| | |||  |||||    
T  1013129 ttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtacacatgcctcta 1013030  T
Q  953 tgcacgagccggattagtcgt 973  Q
     ||| |||||| |||| ||||    
T  1013029 cgcatgagccgaattaatcgt 1013009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 2964034 - 2964186
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||| ||| ||||||||| ||||||| ||||| |||||  || | |||| || |||| ||||  | |||||||||||||||| || || ||||  |||||    
T  2964034 ttggactctagtggcaagtagctccttccaagaacgtacccggggaataccgtgttcgattccgatgaggaacaacgcttggccaatgtgcatgcctcta 2964133  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     |||||| |||||||||||| ||| |||||||| |   |||||||||||||||    
T  2964134 cgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaa 2964186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 856 - 1005
Target Start/End: Complemental strand, 7673803 - 7673657
Alignment:
Q  856 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 955  Q
    ||||||||||||||||||||||| ||||||||||||  | | |||||| ||||| |||   ||| ||||||||| ||||  |||| ||||  ||||| ||    
T  7673803 ggctccagtggcaaggagctccttccaaggacgtatctggggaatatcaagttcgatt---agggggaacaacgtttggctagtgtgcatgcctctacgc 7673707  T
Q  956 acgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    ||||||||||||  ||| |||||||| ||| ||| | ||||||||||||||    
T  7673706 acgagccggatttttcgcccatctttagtg-gatcgaaaaccggtgcgaaa 7673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 852 - 946
Target Start/End: Original strand, 6940515 - 6940609
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcata 946  Q
    ||||||||||||||| ||||||||| | ||||||| |||| ||  |||||||| |||| |||  |||| ||||||||||||||  ||||||||||    
T  6940515 tttgggctccagtggtaaggagctcattccaaggaggtatccggaaaatatcgggttcgatttccaggtggaacaacgcttggctagtgcgcata 6940609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 853 - 1019
Target Start/End: Complemental strand, 8997696 - 8997530
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||| ||||||||||||||| |||||  ||||||| ||| || | |||| || |||| ||||  | | ||||||||| || | |||| |||||  || ||    
T  8997696 ttggactccagtggcaaggaactcctttcaaggacatattcggggaataccgtgttcgattcctaaggggaacaacgtttcgccagttcgcatgcctata 8997597  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaac 1019  Q
     ||| ||||| |||||||||| ||||||||||| |  |||||||||||||||| ||| | |||||||    
T  8997596 cgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaagcaaaaaaaaaaac 8997530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 852 - 985
Target Start/End: Complemental strand, 9860149 - 9860015
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgc-gtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctc 950  Q
    |||||| ||||||||||| |||||||| |||||||||||| | | | |||| || |||| |||| |||| |||||||| ||||| ||||| ||||  |||    
T  9860149 tttgggatccagtggcaaagagctccttccaaggacgtatccgggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctc 9860050  T
Q  951 tatgcacgagccggattagtcgtccatctttggtg 985  Q
    ||  || ||||| ||||||||||||| | ||||||    
T  9860049 tacacatgagccagattagtcgtccaccattggtg 9860015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 16893895 - 16894045
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||  ||||||||||| ||||| |||| ||||||| || | ||||||| |||| |||| |||| |||| ||||||||| |||| | |||  || ||    
T  16893895 ttgggctatagtggcaaggaactccttccaatgacgtatccggggaatatcgggttcgattcacagggggaataacgcttggccagtacacatgccttta 16893994  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| |||||||||| |||| ||| |||||||| |  ||||||||||||||||    
T  16893995 cgcatgagccggatt-gtcgcccacctttggtg-gtcggaaaccggtgcgaaa 16894045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 852 - 964
Target Start/End: Complemental strand, 34613931 - 34613819
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||| |||||||| ||||   ||||| || | ||||||| |||| |||| ||||||||||||||  ||| |||| |||||  ||||    
T  34613931 tttgggctccagtggcaatgagctccttccaaaaccgtatccggggaatatcgggttcgattcccaggaggaacaacgtctggccagtacgcatgcctct 34613832  T
Q  952 atgcacgagccgg 964  Q
    || || |||||||    
T  34613831 atacatgagccgg 34613819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 914 - 1001
Target Start/End: Complemental strand, 13358047 - 13357960
Alignment:
Q  914 ctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 1001  Q
    |||||| ||||||||| |||| || || ||||  ||||||||||||||||||||||||||||  |||| ||| |  ||||||||||||    
T  13358047 ctcagggggaacaacgtttggccaatgtgcatgcctctatgcacgagccggattagtcgtccccctttagtgggtcggaaaccggtgc 13357960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 922 - 1005
Target Start/End: Original strand, 23895595 - 23895678
Alignment:
Q  922 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||||| ||||||||||| ||||| |||||||  |||||| ||||||| ||||| || |  |||||| |||||||||    
T  23895595 gaacaacgcttggccagtgcgcatacctctacgcacgagatggattaatcgtccacctttgatgggtcggaaacgggtgcgaaa 23895678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 852 - 982
Target Start/End: Original strand, 26570881 - 26571011
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| |||||||||||||  ||   ||||| ||||  | ||||||||| |||| ||||  ||| |||||||||||||| ||||| | ||   |||    
T  26570881 tttgggctctagtggcaaggagcgacttttaaggatgtatctgggaaatatcgggttcaattcctagggggaacaacgcttggccagtgtgtatgcatct 26570980  T
Q  952 atgcacgagccggattagtcgtccatctttg 982  Q
    | ||| ||||||||||||||||||| |||||    
T  26570981 acgcatgagccggattagtcgtccacctttg 26571011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 853 - 982
Target Start/End: Complemental strand, 35496406 - 35496278
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||| |||||||||||||| |  ||||||||||| || | ||||||  |||| ||| ||||  | |||||| ||||||||||||||||  |||||    
T  35496406 ttgggctccggtggcaaggagctcatttcaaggacgtat-cgaggaatatcaggttcaattttcagaggaaacaacacttggtcagtgcgcatgcctcta 35496308  T
Q  953 tgcacgagccggattagtcgtccatctttg 982  Q
     | |||||| |||||| ||| ||| |||||    
T  35496307 cgtacgagctggattaatcgcccacctttg 35496278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 910 - 966
Target Start/End: Complemental strand, 8587034 - 8586978
Alignment:
Q  910 tattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggat 966  Q
    ||||| |||| |||||||||||||| ||||||||||| ||||| ||| |||||||||    
T  8587034 tattcccagggggaacaacgcttggccagtgcgcatacctctacgcatgagccggat 8586978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 852 - 972
Target Start/End: Original strand, 18091358 - 18091477
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||  | ||||||||| |  ||||||||| | | ||| ||||||| ||  ||||||| |||  ||||||||||  ||||    
T  18091358 tttgggctccagtggcaaggagcttattccaaggacgcacccgtgaaataccaaattcaattctca-gaaaaacaacgtttgaccagtgcgcatgcctct 18091456  T
Q  952 atgcacgagccggattagtcg 972  Q
    | ||||||| || ||||||||    
T  18091457 acgcacgaggcgaattagtcg 18091477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 852 - 940
Target Start/End: Complemental strand, 44031593 - 44031505
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtg 940  Q
    |||| |||| ||||||||||| ||||| ||||||| |||  || ||||||||| |||| |||  |||| |||||||||||||| |||||    
T  44031593 tttgagctctagtggcaaggaactccttccaaggatgtaaccgggaaatatcgggttcgatttccagggggaacaacgcttggccagtg 44031505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 852 - 890
Target Start/End: Original strand, 34846771 - 34846809
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgta 890  Q
    ||||||||||||||||||||||||| | |||||||||||    
T  34846771 tttgggctccagtggcaaggagctcattccaaggacgta 34846809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 4e-35; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 4e-35
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 21898606 - 21898758
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  |||||    
T  21898606 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctcta 21898705  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| |||||||||||||||| || |||| ||| |  ||||||||||||||||    
T  21898706 cgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaa 21898758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 13036156 - 13036004
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||| || | ||||||| |||| ||| ||||| |||||||| ||||| ||||||||||  |||||    
T  13036156 ttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctcta 13036057  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| ||||| |||||||||||||   |||||| |  ||||||||||||||||    
T  13036056 cgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgcgaaa 13036004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 853 - 982
Target Start/End: Complemental strand, 2271453 - 2271326
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| ||||||||   ||||||||||| | |||||||||| ||||||    
T  2271453 ttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattctcaga--gaacaacgcttagccagtgcgcatgtctcta 2271356  T
Q  953 tgcacgagccggattagtcgtccatctttg 982  Q
     ||||||||||||||||||||||| |||||    
T  2271355 cgcacgagccggattagtcgtccacctttg 2271326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 853 - 1018
Target Start/End: Complemental strand, 5253375 - 5253210
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||| ||||||||||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  5253375 ttgggctccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctcta 5253276  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
     ||| ||||||||||| ||| ||| |||||||| |  |||||||||||||||| ||| | ||||||    
T  5253275 cgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcgaaagcaaaaaaaaaaa 5253210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 14107511 - 14107358
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||| ||||||| || | |||| || |||| |||| ||||||||||||||||||  |||||| |||  ||||    
T  14107511 tttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctct 14107412  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||||||||||||||| ||||  || ||| |  ||||||||||||||||    
T  14107411 acgcatgagccggattagtcgcccattattagtgggtcggaaaccggtgcgaaa 14107358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 861 - 1005
Target Start/End: Complemental strand, 6606241 - 6606097
Alignment:
Q  861 cagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgag 960  Q
    |||||||||||||||||| |||||||||||| || | |||| || |||| ||||||||| |||||||| ||||| |||||  |||  ||||| ||| |||    
T  6606241 cagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgag 6606142  T
Q  961 ccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||||||||| | |||||| |  ||||||||||||||||    
T  6606141 ccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 6606097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 860 - 1005
Target Start/End: Complemental strand, 30788996 - 30788853
Alignment:
Q  860 ccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacga 959  Q
    ||||||||||||||||||| ||||||| |||| || | ||||||| |||  ||||||| |  |||||||| |||| ||||||||||  ||||| ||||||    
T  30788996 ccagtggcaaggagctccttccaaggatgtatccggggaatatcgggtttgattctcatg--gaacaacgtttggccagtgcgcatgcctctaggcacga 30788899  T
Q  960 gccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  30788898 gccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 30788853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 3601042 - 3601194
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||| |||||||| |||||| | ||||  |||||| || | |||| ||  ||| ||||||||| |||||||||||||| ||||||||||  || ||    
T  3601042 ttgggctctagtggcaaagagctctttccaaatacgtattcggggaataccggtttcgattctcagggggaacaacgcttggccagtgcgcatgcctata 3601141  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
      |||||||||||||||||||||| |||||||| |  ||||||||||||||||    
T  3601142 cacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 3601194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 13468891 - 13469043
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||  |||||||||||||||| |||||||||||| || | |||| |  |||| ||||  ||| ||||||||| ||||||||||| |||  |||||    
T  13468891 ttgggctctggtggcaaggagctccttccaaggacgtatccggggaataccaggttcaattcctagggggaacaacgattggtcagtgcacatgcctcta 13468990  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||||||||| ||||||||| ||| | |||||| | |||||||||||||||||    
T  13468991 cgcacgagccagattagtcgcccaccattggtgggttggaaaccggtgcgaaa 13469043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 19089456 - 19089608
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||| ||||||||||| |  ||||||||||| || | |||| |  |||  |||| |||| |||||||| ||||| ||||| ||||  |||||    
T  19089456 ttgggctccagtcgcaaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtgagcatgcctcta 19089555  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||||||||||||||||||||| | |||||||| |  ||||||||||||||||    
T  19089556 cgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaa 19089608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 8612127 - 8611974
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||||||||||||||||||||| |||||||||||  || | |||| || |||| ||||  |||||||||||||||||  ||||| ||||   |||    
T  8612127 tttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttct 8612028  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| || |||||||||||| ||| |||||||| |   |||||||||||||||    
T  8612027 acgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaa 8611974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 916 - 1005
Target Start/End: Original strand, 12606451 - 12606540
Alignment:
Q  916 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| ||||||||| |||| ||||||||||  ||||| ||||||||||||||||||| ||| |||||||| | |||||||||||||||||    
T  12606451 cagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgagctggaaaccggtgcgaaa 12606540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 985
Target Start/End: Complemental strand, 19230710 - 19230579
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||||||||||  || ||| || ||  ||| ||| ||| | |||||||||||||||||||  ||||  ||||    
T  19230710 tttgggctccagtggcaaggagctccttccaaggacgtactcgggaa-taccggattcgattttcaag-ggaacaacgcttggtcagtatgcatgcctct 19230613  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | |||||||||||||||||||| |||| ||||||    
T  19230612 acgcacgagccggattagtcgttcatcattggtg 19230579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 853 - 985
Target Start/End: Complemental strand, 29444917 - 29444785
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||| ||||||||||||||||| |||| ||||||  || |  ||| || |||| |||   ||| |||||||||||||| ||||||||||  |||||    
T  29444917 ttgggctctagtggcaaggagctccttccaaagacgtacccgggggataccgggttcgatttctagggggaacaacgcttggccagtgcgcatgcctcta 29444818  T
Q  953 tgcacgagccggattagtcgtccatctttggtg 985  Q
     ||| ||||||||||||| ||||||||||||||    
T  29444817 cgcatgagccggattagttgtccatctttggtg 29444785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 858 - 1005
Target Start/End: Original strand, 8932624 - 8932771
Alignment:
Q  858 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 957  Q
    |||||||||||||||| |||| ||||||| |||| || | ||||||| |||| |||| |||| |||||||| |||||  |||||||||  ||||| |||     
T  8932624 ctccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcat 8932723  T
Q  958 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||| ||  ||| ||||| || |  ||||||||||||||||    
T  8932724 gagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaa 8932771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 858 - 1005
Target Start/End: Original strand, 8944090 - 8944237
Alignment:
Q  858 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 957  Q
    |||||||||||||||| |||| ||||||| |||| || | ||||||| |||| |||| |||| |||||||| |||||  |||||||||  ||||| |||     
T  8944090 ctccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcat 8944189  T
Q  958 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||| ||  ||| ||||| || |  ||||||||||||||||    
T  8944190 gagccggattaatcacccacctttgatgggtcggaaaccggtgcgaaa 8944237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 922 - 1005
Target Start/End: Complemental strand, 9633708 - 9633625
Alignment:
Q  922 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||||| ||||||||||  ||||| ||||||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 9633625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 853 - 960
Target Start/End: Complemental strand, 10311621 - 10311514
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||| ||||||||||||| ||||| |||||| || | |||| || |||| || |||| | |||||||||||||| |||||||||| ||||||    
T  10311621 ttgggctccagtagcaaggagctccttccaagaacgtatccggggaataccgggttcgatcctcaaggggaacaacgcttggccagtgcgcatgtctcta 10311522  T
Q  953 tgcacgag 960  Q
     |||||||    
T  10311521 cgcacgag 10311514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 852 - 982
Target Start/End: Complemental strand, 34954771 - 34954642
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||| ||||||||||||||| |||||||||||   | | |||| |  |||| ||||||||| ||||||||| |||| |||||| |||| ||||    
T  34954771 tttgggctcca-tggcaaggagctccttccaaggacgtacctggggaataccaggttcgattctcagggggaacaacgtttggccagtgcacatacctct 34954673  T
Q  952 atgcacgagccggattagtcgtccatctttg 982  Q
    | ||| ||||| ||||||||||||| |||||    
T  34954672 acgcatgagccagattagtcgtccacctttg 34954642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 852 - 985
Target Start/End: Complemental strand, 9179889 - 9179756
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||| | |||||||||||  |  | |||| || |||| |||| |||| |||||||| ||||  ||||  ||||| ||||    
T  9179889 tttgggctccagtggcaaggagctcattccaaggacgtacccagggaataccgggttcgattcccagggggaacaacacttgaccagtatgcatacctct 9179790  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | ||| |||| |||||||||||||| ||||||||    
T  9179789 acgcatgagctggattagtcgtccacctttggtg 9179756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 8938668 - 8938821
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||| |||||||||||| |||| ||| ||| || | ||||    |||| |||| ||||||||||||| ||||  |||||||||    |||    
T  8938668 tttgggctccagtgacaaggagctccttccaaagacatatccggggaatacttggttcgattcccaggaggaacaacacttgaccagtgcgcaagcatct 8938767  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| |||||| |||||||||||| ||||| || |  ||||||||||||||||    
T  8938768 acgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaa 8938821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 853 - 969
Target Start/End: Complemental strand, 9366575 - 9366459
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||| |||||||||||| ||||||| |||   | | ||||||  |||| ||| | ||| |||| ||||||||| ||||||||||  |||||    
T  9366575 ttgggctccagtgacaaggagctccttccaaggatgtacttggggaatatcaggttcgatttttagggggaataacgcttggccagtgcgcatgcctcta 9366476  T
Q  953 tgcacgagccggattag 969  Q
     ||||||||||||||||    
T  9366475 cgcacgagccggattag 9366459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 853 - 975
Target Start/End: Complemental strand, 24672018 - 24671896
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||||||||||||  |||||||||||  |   |||| || ||||||||| |||  |||||||| ||||  ||||| ||||  |||||    
T  24672018 ttgggctccagtggcaaggagctcctttcaaggacgtatctggagaataccgggttctattcccagagggaacaacacttgaccagtgtgcatgcctcta 24671919  T
Q  953 tgcacgagccggattagtcgtcc 975  Q
     |||| |||||||||||| ||||    
T  24671918 cgcacaagccggattagtagtcc 24671896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 896 - 1005
Target Start/End: Original strand, 5029818 - 5029927
Alignment:
Q  896 gaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaac 995  Q
    |||| |||| |||| |||||||||  |||||||| |||||||||||||||  ||||| ||| |||  |||||||||| ||||||||| || |  ||||||    
T  5029818 gaaacatcgggttcgattctcagggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaac 5029917  T
Q  996 cggtgcgaaa 1005  Q
     |||||||||    
T  5029918 tggtgcgaaa 5029927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 852 - 930
Target Start/End: Complemental strand, 3030771 - 3030693
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgc 930  Q
    ||||||||||||||||||||||||| | ||||||||||||    | ||||||| |||| |||| |||| ||||||||||    
T  3030771 tttgggctccagtggcaaggagctcattccaaggacgtatttcgggaatatcgggttcgattcccagggggaacaacgc 3030693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 852 - 974
Target Start/End: Complemental strand, 3588098 - 3587976
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| |||||||||||| |  | |||| ||||||| ||   |||| || |||| |||| || | |||||||||||||| |||||| |||| ||||    
T  3588098 tttgggctcaagtggcaaggagtttattccaaagacgtatccggagaataccgggttcgattcccaaggggaacaacgcttggccagtgcacatacctct 3587999  T
Q  952 atgcacgagccggattagtcgtc 974  Q
    | ||| || ||||||||||||||    
T  3587998 acgcatgaaccggattagtcgtc 3587976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 921 - 971
Target Start/End: Original strand, 10396499 - 10396549
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 971  Q
    ||||||||| |||| ||||||||||||||||||||| ||| ||||||||||    
T  10396499 ggaacaacgtttggccagtgcgcatatctctatgcatgagtcggattagtc 10396549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 863 - 1005
Target Start/End: Original strand, 12635782 - 12635924
Alignment:
Q  863 gtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagcc 962  Q
    ||||||||  |||||| |||||||||||| || | |||| |  |||  |||| |||| | ||||||||||||  |||||||||  ||||| |||| ||||    
T  12635782 gtggcaagatgctccttccaaggacgtatccggggaataccaggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagcc 12635881  T
Q  963 ggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||| |||   |||||| |  ||||||||||||||||    
T  12635882 ggattagtcgcccactattggtgggtcggaaaccggtgcgaaa 12635924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 903 - 1005
Target Start/End: Original strand, 30410453 - 30410555
Alignment:
Q  903 cgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcg 1002  Q
    ||||||| |||||||||||||||||| |||   ||||||||||  ||||| ||| |||| |||||| |||  ||||||||||| |  |||||||| ||||    
T  30410453 cgagttcgattctcaggaggaacaacacttaaccagtgcgcatgcctctacgcatgagctggattaatcgctcatctttggtgggtcggaaaccgatgcg 30410552  T
Q  1003 aaa 1005  Q
    |||    
T  30410553 aaa 30410555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 856 - 982
Target Start/End: Original strand, 33939972 - 33940098
Alignment:
Q  856 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 955  Q
    ||||||| ||| |||||||| || | |||||||||| || | ||||  | |||  |||||||||||||||||  |||   || |||||||  |||||  |    
T  33939972 ggctccaatggaaaggagctacttctaaggacgtatccgaggaatactgggtttgattctcaggaggaacaatacttaaccattgcgcatgcctctacac 33940071  T
Q  956 acgagccggattagtcgtccatctttg 982  Q
    |||||||||||||||||||||||||||    
T  33940072 acgagccggattagtcgtccatctttg 33940098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 853 - 930
Target Start/End: Original strand, 5759586 - 5759663
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgc 930  Q
    |||||||||||||||||||| ||||| |||||||||||  || | ||||||| |||  ||||  ||||||||||||||    
T  5759586 ttgggctccagtggcaaggaactccttccaaggacgtacccgaggaatatcgggtttgattccgaggaggaacaacgc 5759663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 852 - 973
Target Start/End: Original strand, 9147258 - 9147379
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||| ||||||||| | |||||||||||   | | ||||||| |||| |||| |||| ||||| || ||||  |||||| |||  ||||    
T  9147258 tttgggctccagtgggaaggagctcattccaaggacgtacctggggaatatcgggttcgattcccagggggaacgacacttgaccagtgcacatgcctct 9147357  T
Q  952 atgcacgagccggattagtcgt 973  Q
    | |||  |||||||||||||||    
T  9147358 acgcataagccggattagtcgt 9147379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 853 - 982
Target Start/End: Complemental strand, 17115049 - 17114920
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||| ||||||| |||||||||||   |   ||||| || ||| ||||  || ||||||||||||||| || ||  |||  |||||    
T  17115049 ttgggctccagtggcaagaagctccttccaaggacgtacatggagaatattgaattcgattcctagaaggaacaacgcttggccaatggacatgcctcta 17114950  T
Q  953 tgcacgagccggattagtcgtccatctttg 982  Q
     ||| ||||||||||||||| ||| |||||    
T  17114949 cgcatgagccggattagtcgcccacctttg 17114920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 921 - 985
Target Start/End: Complemental strand, 32157251 - 32157187
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 985  Q
    |||||||| ||||  ||||||||||| ||||| ||| ||||| |||||||| |||||||||||||    
T  32157251 ggaacaacacttgaccagtgcgcatacctctacgcatgagccagattagtcatccatctttggtg 32157187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 923 - 982
Target Start/End: Original strand, 8888910 - 8888969
Alignment:
Q  923 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 982  Q
    ||||||| |||| ||||||||||| ||||| ||| ||| ||||||||||||||| |||||    
T  8888910 aacaacgtttggccagtgcgcatacctctacgcatgagtcggattagtcgtccacctttg 8888969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 959 - 1005
Target Start/End: Complemental strand, 8149843 - 8149797
Alignment:
Q  959 agccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||| |||||||||||| |||||||| | |||||||||||||||||    
T  8149843 agccgaattagtcgtccacctttggtgggttggaaaccggtgcgaaa 8149797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 853 - 891
Target Start/End: Complemental strand, 15643980 - 15643942
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtat 891  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  15643980 ttgggctccagtggcaaggagctcattccaaggacgtat 15643942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 911 - 1005
Target Start/End: Original strand, 31129193 - 31129287
Alignment:
Q  911 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| |||| ||| ||||||||||  |||||||||  ||||| ||| ||||| ||||||| || || |||||||| |  ||||||||||||||||    
T  31129193 attcacagggggagcaacgcttggctagtgcgcatgcctctacgcatgagccagattagttgtgcacctttggtgagtcggaaaccggtgcgaaa 31129287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 11142560 - 11142713
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||  ||||| |||| ||||| | |||||||| ||  || |||||| ||||||| |||| |||  | ||||||| |||  ||||||||||  ||||    
T  11142560 tttgggcctcagtgacaagaagctcattccaaggacatacccgggaaataccgagttcgattcgcagtggaaacaacgtttgaccagtgcgcatgcctct 11142659  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||| | ||||||| ||||| |||||||| |  ||| ||||||||||||    
T  11142660 acgcatgagtcagattagttgtccaactttggtgggtcggagaccggtgcgaaa 11142713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 948 - 1005
Target Start/End: Complemental strand, 14783477 - 14783420
Alignment:
Q  948 ctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||| ||| ||||||||||||||||||| | |||||| |  ||||||||||||||||    
T  14783477 ctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 14783420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 853 - 890
Target Start/End: Complemental strand, 21016903 - 21016866
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgta 890  Q
    |||||||||||||||||||||||||| ||| |||||||    
T  21016903 ttgggctccagtggcaaggagctccttccagggacgta 21016866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 1e-34; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 854 - 1005
Target Start/End: Complemental strand, 40781012 - 40780861
Alignment:
Q  854 tgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctat 953  Q
    |||||||||||||||||||||| ||   |||||||||| ||  |||||||| |||| ||||||| | |||||||||||||||||||||||||  |||||     
T  40781012 tgggctccagtggcaaggagcttcttttaaggacgtattcggaaaatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctac 40780913  T
Q  954 gcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||| ||||||||||||||||||| |||||||| |  ||||||||||||||||    
T  40780912 gcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 38165985 - 38166138
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||| ||||||||||||||| |||||||||||| || | ||||  | |||  |||| |||| |||||||||||||| ||||||||||  ||||    
T  38165985 tttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgcatggctct 38166084  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||||||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  38166085 acgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 38166138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 29895746 - 29895898
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  29895746 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctcta 29895845  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| ||||||||||||||||||| | ||||||    ||||||||||||||||    
T  29895846 cgcatgagccggattagtcgtccaccattggtggttcggaaaccggtgcgaaa 29895898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 852 - 1003
Target Start/End: Complemental strand, 1940927 - 1940779
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| ||||||||||||||||| |||||||||||  || ||||||||| |||| |||| |||| ||||||||||||||   ||||||||  ||||    
T  1940927 tttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctct 1940831  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcga 1003  Q
    | ||||||||||||||||||| ||| |||||||| |  | ||||||||||||    
T  1940830 acgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 1940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 853 - 976
Target Start/End: Original strand, 1446785 - 1446908
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  1446785 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctcta 1446884  T
Q  953 tgcacgagccggattagtcgtcca 976  Q
     ||| |||||||||||||||||||    
T  1446885 cgcatgagccggattagtcgtcca 1446908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 858 - 1005
Target Start/End: Complemental strand, 42722724 - 42722577
Alignment:
Q  858 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 957  Q
    |||||||||  |||||||||| |||||||||||  || |||||| || |||| |||| ||||||||||||||||||| ||||||||||  ||||| |||     
T  42722724 ctccagtggttaggagctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcat 42722625  T
Q  958 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||||||||| || |||| ||| |  | ||||||||||||||    
T  42722624 gagccggattagtcgttcacctttagtgggtcgaaaaccggtgcgaaa 42722577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 53599018 - 53599171
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||| ||||||||||||||| |||||||||||  || | |||| || |||| |||| |||||||||||||| |||| ||||||||||  ||||    
T  53599018 tttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctct 53599117  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    | ||| ||||||||||| |||| || |||| ||| ||| ||||||||||||||||    
T  53599118 acgcatgagccggattaatcgttcacctttagtg-gatcggaaaccggtgcgaaa 53599171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 2559265 - 2559418
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||| |||||||| |||||||||||   | | |||| ||  ||| |||   |||||||||||||||||| ||||||||||  ||||    
T  2559265 tttgggctccagtggcaacgagctccttccaaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgcatgcctct 2559364  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | |||| |||||||||| ||||||| |||||||| |  ||||||||||||||||    
T  2559365 acgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcgaaa 2559418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 852 - 985
Target Start/End: Complemental strand, 5473001 - 5472868
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||| |  ||||||||||| || | |||| |  |||  ||||||||| | |||||||||||| ||||||||||  ||||    
T  5473001 tttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcatgcctct 5472902  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | ||||||||||||||||||| ||| ||||||||    
T  5472901 acgcacgagccggattagtcgcccacctttggtg 5472868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 853 - 1018
Target Start/End: Original strand, 47078417 - 47078582
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||| |||||||||||||||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||||||||| |||||| |||  |||||    
T  47078417 ttgggttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctcta 47078516  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
     |||||||||||||||||||  || | |||||| |  ||||||| |||||||| ||| | ||||||    
T  47078517 cgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgcgaaagcaaaaaaaaaaa 47078582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 52950040 - 52950193
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| ||||||||||||||||| |||||||||||   | | ||||||| |||| |||| |||| |||||||||||||| ||||||||||  ||||    
T  52950040 tttgggctctagtggcaaggagctccttccaaggacgtacctggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgactct 52950139  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |  || || || ||||||||||||| |||||||| |  |||||||| |||||||    
T  52950140 acacatgaaccagattagtcgtccacctttggtgggtcggaaaccgatgcgaaa 52950193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 853 - 1018
Target Start/End: Original strand, 55920993 - 55921158
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| ||||||||| |  || | |||| || |||| |||| |||| |||||||| ||||||||||||||||  |||||    
T  55920993 ttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctcta 55921092  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
     | | ||||||||||| |||  || |||||||| |  |||||||||||||||| ||| | ||||||    
T  55921093 cgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcgaaagcaaaaaaaaaaa 55921158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 853 - 985
Target Start/End: Original strand, 7741884 - 7742016
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||| |||||||||||||||||  |||| |||||| || | ||||||| |||| | ||||||| | |||||||||||| |||||| |||  |||||    
T  7741884 ttgggctctagtggcaaggagctcctttcaagtacgtattcgaggaatatcgggttccaatctcaggggtaacaacgcttggccagtgcacatgcctcta 7741983  T
Q  953 tgcacgagccggattagtcgtccatctttggtg 985  Q
     |||||| || ||||||||||||||||||||||    
T  7741984 cgcacgatccagattagtcgtccatctttggtg 7742016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 852 - 1000
Target Start/End: Original strand, 8888980 - 8889128
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| || |||||||||||||| | |||||||||| || | |||| || |||| ||||  ||| |||||||| ||||| ||||||||||  ||||    
T  8888980 tttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctct 8889079  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtg 1000  Q
    | ||| ||||||||||||||||||| |||||||| |  |||||||||||    
T  8889080 acgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtg 8889128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 852 - 1018
Target Start/End: Original strand, 38075391 - 38075557
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||| ||||||||| |||| |||||||||||| ||   |||| || |||| ||||||||| | |||||||||||| ||||||||||  ||||    
T  38075391 tttgggctccagcggcaaggagttccttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgcgcatgcctct 38075490  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    | ||| |||||| |||| | ||||| |||||||| |  |||||||| ||||||| ||| | ||||||    
T  38075491 acgcatgagccgaattaattgtccacctttggtgggtcggaaaccgatgcgaaagcaaaaaaaaaaa 38075557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 852 - 985
Target Start/End: Original strand, 6779169 - 6779302
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||||||||| || |||||||||||   |   |||| || |||| |||| |||| |||||||| | ||| ||||||||||  ||||    
T  6779169 tttgggctccagtggcaaggagcttcttccaaggacgtacctggagaataccgggttcgattcccagggggaacaacacctggccagtgcgcatgcctct 6779268  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    ||||| ||||||||||||||||||| ||||||||    
T  6779269 atgcatgagccggattagtcgtccacctttggtg 6779302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 43458572 - 43458724
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||| ||||| | ||||||||||||  | | ||||  |  ||| |||| ||||||||| ||||||||| ||||||||||  |||||    
T  43458572 ttgggctccagtggcaagaagctcattccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgcgcatgcctcta 43458671  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     | ||||||||||||||||||||| ||||| || |  |||||||| |||||||    
T  43458672 cggacgagccggattagtcgtccacctttgatgagtcggaaaccgttgcgaaa 43458724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 852 - 928
Target Start/End: Original strand, 13552072 - 13552148
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaac 928  Q
    ||||||||||||||||||||||||||| ||||| |||||| || | ||||||| |||| ||||||||||||||||||    
T  13552072 tttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 13552148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 853 - 984
Target Start/End: Original strand, 27248387 - 27248516
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||| |||||||| |||||||||||| || | |||| || |||| | || ||||||||||||||||||| ||  ||||||  |||||    
T  27248387 ttgggctccagtggcaacgagctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggcca--gcgcatgcctcta 27248484  T
Q  953 tgcacgagccggattagtcgtccatctttggt 984  Q
     ||| ||||| ||||||||| ||| |||||||    
T  27248485 cgcaggagccagattagtcgcccacctttggt 27248516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 853 - 1001
Target Start/End: Complemental strand, 48317427 - 48317279
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||| |||||| | |||| ||||||| ||  |||||  |  ||| ||| |||||||||||||||||||||||||| | ||  |||||    
T  48317427 ttgggctccagtggcaaagagctcattccaatgacgtattcgaaaaatactggattcgattttcaggaggaacaacgcttggtcagtgtgtatgcctcta 48317328  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 1001  Q
     ||||||||||||||||||| ||| | ||| || | |||||||| ||||    
T  48317327 cgcacgagccggattagtcgcccaccgttgatgggttggaaaccagtgc 48317279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 853 - 972
Target Start/End: Complemental strand, 3574598 - 3574479
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||     | |||| ||||||| |||| ||||  ||||||| ||||| ||||||||||  |||||    
T  3574598 ttgggctccagtggcaaggagctccttccaaggacgtacctagggaataccgagttcaattcccagggagaacaacacttggccagtgcgcatgcctcta 3574499  T
Q  953 tgcacgagccggattagtcg 972  Q
     ||||||| |||||||||||    
T  3574498 cgcacgagtcggattagtcg 3574479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 858 - 1005
Target Start/End: Original strand, 20128273 - 20128420
Alignment:
Q  858 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 957  Q
    |||||| ||||||||| |||| |||||||||||| || | ||||  | |||| ||||||||| ||||||| |||||| ||||||||||  || || ||||    
T  20128273 ctccagcggcaaggagttccttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcac 20128372  T
Q  958 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||  ||||||||||||| | |||||| |   |||||||||||||||    
T  20128373 gagctagattagtcgtccaccattggtgggtcagaaaccggtgcgaaa 20128420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 858 - 1005
Target Start/End: Complemental strand, 36145362 - 36145215
Alignment:
Q  858 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 957  Q
    |||| |||||||||||||| | |||||||||||  || | |||| || |||| |||| |||| | ||||||||||| |||||||||||  |||||  ||     
T  36145362 ctccggtggcaaggagctcattccaaggacgtacccggggaataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacat 36145263  T
Q  958 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||||||||||| ||||| ||    ||||||||||||||||    
T  36145262 gagccggattagtcgtccacctttgatgaatcggaaaccggtgcgaaa 36145215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 6032792 - 6032643
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||  || | |||| || |||| ||| ||||||||    |||||||  |||||| |||  |||||    
T  6032792 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaattttcaggagg---tacgcttgaccagtgctcatgcctcta 6032696  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     | | ||||||||||||||||| | |||||||| |  ||||||||||||||||    
T  6032695 cgaatgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaa 6032643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 853 - 1018
Target Start/End: Original strand, 24166409 - 24166574
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||  || | ||||  | |||| |||| || | | ||||||| |||| ||||||||||  |||||    
T  24166409 ttgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgcgcatgcctcta 24166508  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaaccaagataaaaaa 1018  Q
     ||||||||| ||||||||  ||| ||||| || ||| |||||||||||||||| ||| | ||||||    
T  24166509 cgcacgagccagattagtcacccacctttgatg-gatcggaaaccggtgcgaaagcaaaaaaaaaaa 24166574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 916 - 1005
Target Start/End: Original strand, 4738640 - 4738729
Alignment:
Q  916 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||||||||| | |||||||||| |||||| ||| |||| | |||||||||||| |||||||| |  ||||||||||||||||    
T  4738640 caggaggaacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4738729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 33647680 - 33647832
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||| |||||||||||||||||  |||||||||||  | | |||| || |||| |||  ||||  ||||||||||||  |||||| |||  |||||    
T  33647680 ttgggctctagtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgcacattcctcta 33647779  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
     |||||| || |||||||||| ||||||||||| ||| ||||||||||||||||    
T  33647780 cgcacgaaccagattagtcgttcatctttggtg-gatcggaaaccggtgcgaaa 33647832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 864 - 1005
Target Start/End: Original strand, 38168227 - 38168367
Alignment:
Q  864 tggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccg 963  Q
    ||||||||||||||| |||||||||||  || | |||| |  |||| ||||  | |||||||||||||||| |||||| |||  ||||| ||| ||||||    
T  38168227 tggcaaggagctccttccaaggacgtacccggggaataccaggttcgattcctaagaggaacaacgcttggccagtgc-catgcctctacgcatgagccg 38168325  T
Q  964 gattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||| || |||| ||| | |||||||||||||||||    
T  38168326 gattagtcgttcacctttagtgggttggaaaccggtgcgaaa 38168367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 853 - 982
Target Start/End: Complemental strand, 41163034 - 41162905
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||| |||||||||||| |||||||||||| || |||||| ||||||| |||  |||  |||||||| ||||| |||||  |||   ||||    
T  41163034 ttgggctccagtgacaaggagctccttccaaggacgtatccgggaaataccgagttcgatttccagagggaacaacacttggccagtgtacatgcttcta 41162935  T
Q  953 tgcacgagccggattagtcgtccatctttg 982  Q
    |||| |||||| |||||||| ||| |||||    
T  41162934 tgcatgagccgaattagtcgcccacctttg 41162905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 864 - 985
Target Start/End: Complemental strand, 49260806 - 49260685
Alignment:
Q  864 tggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccg 963  Q
    ||||||||| ||||| ||||||| |||| || | ||||  || ||| |||| || | |||||||||||||| ||||||||||  ||||| ||||||||||    
T  49260806 tggcaaggaactccttccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccg 49260707  T
Q  964 gattagtcgtccatctttggtg 985  Q
    ||||||||| ||| ||||||||    
T  49260706 gattagtcgaccacctttggtg 49260685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 852 - 1004
Target Start/End: Complemental strand, 295685 - 295534
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||| | ||| | |||||||||| || | |||| |   ||| |||| ||| |||||||||| |||| ||||||||||  ||||    
T  295685 tttgggctccagtggcaaggaacaccttctaaggacgtatccggggaataccagattcgattcccag-aggaacaacgtttggccagtgcgcatgcctct 295587  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaa 1004  Q
    | |||||| || ||||||||||||| | |||||| | | ||||||||||||||    
T  295586 acgcacgaaccagattagtcgtccaccgttggtgggtttgaaaccggtgcgaa 295534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 921 - 1005
Target Start/End: Complemental strand, 7246730 - 7246646
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||||||| ||||||||||  ||||| ||| ||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  7246730 ggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 7246646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 852 - 1007
Target Start/End: Original strand, 13073496 - 13073651
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| |||||||| |||||||| |||||||||||   |   |||| ||||||| |||| || | ||||||| | |||| ||||||||||| ||||    
T  13073496 tttgggctctagtggcaatgagctccttccaaggacgtacctggagaataccgagttcgattcccatggggaacaatgtttggccagtgcgcatacctct 13073595  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaacc 1007  Q
    | ||| || || ||||||||||  | |||||||| |  ||||||||||||||||||    
T  13073596 acgcatgaaccagattagtcgtttacctttggtgggtcggaaaccggtgcgaaacc 13073651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 859 - 1005
Target Start/End: Complemental strand, 49952292 - 49952145
Alignment:
Q  859 tccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacg 958  Q
    |||| ||||||||||||||| |||||||||||| || |||||||   |||  ||| |||| || ||||||| ||||||||||||||   ||||| ||| |    
T  49952292 tccattggcaaggagctccttccaaggacgtattcgggaaatattaggtttgattttcagaagaaacaacgtttggtcagtgcgcacgcctctacgcatg 49952193  T
Q  959 agccggattagtcg-tccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||||||   || ||||| || | |||||||||||||||||    
T  49952192 agccggattagtcgcgtcacctttgatgggttggaaaccggtgcgaaa 49952145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 14123974 - 14124127
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||| ||||||| ||||||| ||||| |||||   | | |||| |  |||| |||| |||| ||||||||  |||| ||||||||||  ||||    
T  14123974 tttgggctccaatggcaagaagctccttccaagaacgtacttgaggaataccaggttcgattcccagggggaacaacatttggccagtgcgcatgcctct 14124073  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |  ||||||||||||||||||  || | |||||| | |||||||||||||||||    
T  14124074 acacacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaa 14124127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 853 - 970
Target Start/End: Original strand, 29588695 - 29588812
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||| | |||| |||||   || |||||| || |||| |||| |||| | ||||| ||||||  |||||||||  |||||    
T  29588695 ttgggctccagtggcaaggagctcattccaaagacgtgcccgggaaataccgggttcgattcccaggggaaacaaagcttggctagtgcgcatgcctcta 29588794  T
Q  953 tgcacgagccggattagt 970  Q
     |||||||||||||||||    
T  29588795 cgcacgagccggattagt 29588812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 857 - 985
Target Start/End: Complemental strand, 36262913 - 36262787
Alignment:
Q  857 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 956  Q
    |||||||||||||| ||||||| |||||||||||  ||   |||| || |||| |||| ||||  ||||||||||||| |||||| |||  ||||| |||    
T  36262913 gctccagtggcaagaagctccttccaaggacgtacccggagaataccgggttcgattcccagg--gaacaacgcttggccagtgcacatgcctctacgca 36262816  T
Q  957 cgagccggattagtcgtccatctttggtg 985  Q
    |||| ||||||||||| ||| ||||||||    
T  36262815 cgagtcggattagtcgcccacctttggtg 36262787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 7000482 - 7000630
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||| |||||||||| ||||||| |||||||||||  || | |||| ||||||| |||| ||||| ||||||||||||| || || ||    ||||    
T  7000482 tttgggctacagtggcaagaagctccttccaaggacgtactcggggaataccgagttcgattcccaggaagaacaacgcttggccaatgtgc----ctct 7000577  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||||||||| |||||||||  || ||||||||   || ||||||||||||||    
T  7000578 acgcacgagccagattagtcgctca-ctttggtggattgaaaaccggtgcgaaa 7000630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 853 - 985
Target Start/End: Complemental strand, 20532561 - 20532429
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||| |||||||||||||| |||| | |||||| | ||  ||   |||| ||||||| |||  ||||||||||||||||||| ||||||||||  |||||    
T  20532561 ttggactccagtggcaaggtgctcattccaaggccatacccggagaataccgagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctcta 20532462  T
Q  953 tgcacgagccggattagtcgtccatctttggtg 985  Q
     ||| ||||||||| ||||| ||| ||||||||    
T  20532461 cgcatgagccggataagtcgcccacctttggtg 20532429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 872 - 1004
Target Start/End: Original strand, 21429279 - 21429411
Alignment:
Q  872 agctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 971  Q
    ||||||| |||| ||||||| || | ||||||| |||| ||| | ||| ||||||||| || | ||||||||||  ||||| ||||||| | || |||||    
T  21429279 agctccttccaaagacgtatccgaggaatatcgggttcgatttttagggggaacaacgtttagccagtgcgcatgcctctacgcacgagtcagactagtc 21429378  T
Q  972 gtccatctttggtgtgatggaaaccggtgcgaa 1004  Q
    ||||| |||||||| |  |||||||||||||||    
T  21429379 gtccacctttggtgggtcggaaaccggtgcgaa 21429411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 906 - 1005
Target Start/End: Original strand, 16450312 - 16450411
Alignment:
Q  906 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| |||| |||| |||||||||||||| |||||| |||  ||||| ||| ||||| ||||||||||||| |||||||  |  ||||||||||||||||    
T  16450312 gttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaaa 16450411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 915 - 1005
Target Start/End: Original strand, 14859312 - 14859402
Alignment:
Q  915 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||||| | |||  |||||||||| |||||| ||||||||| |||||||| |||| ||||| ||||  |||||| |||||||||    
T  14859312 tcaggaggaacaatgtttgaccagtgcgcatgtctctacgcacgagccagattagtcatccacctttgatgtgtcggaaactggtgcgaaa 14859402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 911 - 1005
Target Start/End: Complemental strand, 47682475 - 47682382
Alignment:
Q  911 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||| |||| |||| |||| |||||| ||| |||||| ||||||||||| ||||||| ||| |||||||| |  ||||||||||||||||    
T  47682475 attctcagg-ggaataacgtttggccagtgcacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaa 47682382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 856 - 1005
Target Start/End: Complemental strand, 15840083 - 15839935
Alignment:
Q  856 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 955  Q
    ||||||||||||||||||||||| |||||||||||   | | |||| || |||| |||| |  || ||| |||| |||| ||||||||||  ||||| ||    
T  15840083 ggctccagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattc-ctagaagaataacgtttggccagtgcgcatgcctctacgc 15839985  T
Q  956 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||||||||||||||| || |||||| |  | |||||||| ||||||||    
T  15839984 atgagccggattagtcgcccttctttgataggttggaaaccagtgcgaaa 15839935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 916 - 1005
Target Start/End: Original strand, 18531541 - 18531630
Alignment:
Q  916 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| |||||||| ||||||||||||||||  ||| |||||||| || ||||| ||||||| |||| ||| |  ||||||||||||||||    
T  18531541 cagggggaacaacacttggtcagtgcgcatgcctccatgcacgaaccagattattcgtccaccttttgtgggtcggaaaccggtgcgaaa 18531630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 852 - 970
Target Start/End: Original strand, 33109280 - 33109400
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgct--tggtcagtgcgcatatct 949  Q
    ||||||||| |||||| || ||||||| ||||||| |||| || |  |||||| |||| |||| || || ||||||||||  ||| |||| ||||| |||    
T  33109280 tttgggctctagtggcgagaagctccttccaaggaggtatccgggggatatcgggttcaattcccatgaagaacaacgctcttggccagtacgcatgtct 33109379  T
Q  950 ctatgcacgagccggattagt 970  Q
    ||| |||||||||||||||||    
T  33109380 ctacgcacgagccggattagt 33109400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 853 - 981
Target Start/End: Complemental strand, 12703697 - 12703569
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||||||| |||| | |||||||||  || | ||||  |||||| |||  |||  |||||||||||||  ||||| | || ||||||    
T  12703697 ttgggctccagtggcaaggagatccttcaaaggacgtactcgaggaatactgagttcgatttccagtgggaacaacgcttgaccagtgtgtatgtctcta 12703598  T
Q  953 tgcacgagccggattagtcgtccatcttt 981  Q
     |||  |||||||||||||| ||||||||    
T  12703597 cgcataagccggattagtcgcccatcttt 12703569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 852 - 976
Target Start/End: Original strand, 20354595 - 20354719
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||||||||||||||| ||||| ||||||||| |  ||  ||||| ||||||  |||  ||||  |||||||||||||  |||||||||  ||||    
T  20354595 tttggactccagtggcaaggatctccttccaaggacgaactcgaaaaataccgagtttgatttccagggagaacaacgcttggctagtgcgcatgcctct 20354694  T
Q  952 atgcacgagccggattagtcgtcca 976  Q
    | ||| ||| |||||||||||||||    
T  20354695 acgcatgagtcggattagtcgtcca 20354719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 861 - 985
Target Start/End: Original strand, 30317200 - 30317324
Alignment:
Q  861 cagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgag 960  Q
    ||||||||||||| ||||   |||||||||  || | ||||||  |||| ||||||||  |||||||||||||| |||| || ||  ||||| |||||||    
T  30317200 cagtggcaaggagttccttttaaggacgtactcggggaatatcaggttcgattctcagagggaacaacgcttggccagtacgaatgcctctacgcacgag 30317299  T
Q  961 ccggattagtcgtccatctttggtg 985  Q
    ||| |||||||| ||| ||||||||    
T  30317300 ccgaattagtcgcccacctttggtg 30317324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 852 - 972
Target Start/End: Complemental strand, 41339548 - 41339428
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| ||||||||||||||||| |||||||||||  ||   |||| || |||| | || || | |||||||||||||| ||||| | ||  ||||    
T  41339548 tttgggctctagtggcaaggagctccttccaaggacgtacccggagaataccgggttcgactcccaaggggaacaacgcttggccagtgtgtatgcctct 41339449  T
Q  952 atgcacgagccggattagtcg 972  Q
    | ||||||| |||||||||||    
T  41339448 acgcacgagacggattagtcg 41339428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 906 - 1005
Target Start/End: Original strand, 43468359 - 43468458
Alignment:
Q  906 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| |||| |||| |||||||||||||| |||||| ||| |||||| ||| ||||||||||||||| ||| |  ||||| |  ||| ||||||||||||    
T  43468359 gttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccaccagtggtgggtcggagaccggtgcgaaa 43468458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 15829657 - 15829810
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||| ||||||||| ||  ||||||||||| ||   |||||| ||||  ||| ||||| | | |||| ||||| ||||||||||   |||    
T  15829657 tttgggctccagtgacaaggagcttctttcaaggacgtatccggagaatatccagtttgattttcaggggaatcaacacttggccagtgcgcatgcttct 15829756  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    | ||| |||||||||||||| |||| | |||||| |||  |||||||||||||||    
T  15829757 aggcatgagccggattagtcctccaccattggtg-gatcagaaaccggtgcgaaa 15829810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 852 - 978
Target Start/End: Complemental strand, 26480102 - 26479976
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||| ||||||||||||||| ||||| |||||   | | |||| ||||||| ||||| | | |||| ||| ||||| |||| |||||  ||||    
T  26480102 tttgggctccactggcaaggagctccttccaagtacgtacatggggaataccgagttcgattcttaaggggaataacacttggccagtacgcatgcctct 26480003  T
Q  952 atgcacgagccggattagtcgtccatc 978  Q
    | ||| |||||| |||| |||||||||    
T  26480002 acgcatgagccgaattaatcgtccatc 26479976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 923 - 981
Target Start/End: Complemental strand, 55703834 - 55703776
Alignment:
Q  923 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 981  Q
    ||||||| ||||||||||||||| |||| |  |||||||||||||||| ||||||||||    
T  55703834 aacaacgtttggtcagtgcgcatgtctcaacccacgagccggattagttgtccatcttt 55703776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 916 - 1001
Target Start/End: Complemental strand, 3159558 - 3159473
Alignment:
Q  916 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 1001  Q
    |||| |||||||||||||| ||||||||||  ||||| ||||||||| |||||||||  || | |||||| |  ||||||||||||    
T  3159558 cagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcaccattggtgggtcggaaaccggtgc 3159473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 33708275 - 33708226
Alignment:
Q  97 ggagaggtgtcagtggcttatcatagtttagtgctacaactcttccataa 146  Q
    |||||||||||||||||||  |||||||||||| ||||||| ||||||||    
T  33708275 ggagaggtgtcagtggcttcccatagtttagtgttacaacttttccataa 33708226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 921 - 985
Target Start/End: Original strand, 3507297 - 3507361
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 985  Q
    ||||||||||||||  ||||||| |  |||||  |||||||||||||||||||||| ||||||||    
T  3507297 ggaacaacgcttggctagtgcgcgtgcctctacacacgagccggattagtcgtccacctttggtg 3507361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 911 - 971
Target Start/End: Original strand, 14077963 - 14078023
Alignment:
Q  911 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 971  Q
    |||| |||||| |||| | |||||||||||||||| |||||| ||||||| ||||||||||    
T  14077963 attcacaggagaaacatcacttggtcagtgcgcatgtctctacgcacgagtcggattagtc 14078023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 852 - 972
Target Start/End: Complemental strand, 55005459 - 55005339
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||  ||||||| |||||||| |||| |||||||  | |||||| ||| ||| |||| |||| | |||||||||||  || |||||||  ||||    
T  55005459 tttgggctctggtggcaatgagctccttccaaagacgtatctgggaaataccgaattcgattcgcaggggaaacaacgcttgaccattgcgcatgcctct 55005360  T
Q  952 atgcacgagccggattagtcg 972  Q
    | |||| || |||||||||||    
T  55005359 acgcacaagtcggattagtcg 55005339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 852 - 1018
Target Start/End: Complemental strand, 15732601 - 15732435
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||| |  | || |||||||||||| ||   |||| || |||| ||||  | | |||||||| ||||| |||||| |||  ||||    
T  15732601 tttgggctccagtggcaagaaaattcttccaaggacgtatccggagaataccgggttcgattcatatggggaacaacacttggccagtgcacatgcctct 15732502  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    | ||||| ||  |||||||||  ||||||||||| ||| |||||||||||||||| ||| | ||||||    
T  15732501 acgcacgggctagattagtcgctcatctttggtg-gatcggaaaccggtgcgaaagcaaaaaaaaaaa 15732435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 921 - 972
Target Start/End: Original strand, 17080070 - 17080121
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 972  Q
    |||||||||||||| ||||||||||  ||||| ||| |||||||||||||||    
T  17080070 ggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcg 17080121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 852 - 891
Target Start/End: Complemental strand, 19651598 - 19651559
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtat 891  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  19651598 tttgggctccagtggcaatgagctccttccaaggacgtat 19651559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 852 - 972
Target Start/End: Original strand, 31588642 - 31588764
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgct--tggtcagtgcgcatatct 949  Q
    |||||||| ||||| |||||||||| | | |||||||||| || | ||||| | |||  |||| |||  | |||||||||  ||| |||||||||| |||    
T  31588642 tttgggcttcagtgtcaaggagctcgttctaaggacgtattcggggaatattgggtttgattcccagaggaaacaacgctcttggccagtgcgcatgtct 31588741  T
Q  950 ctatgcacgagccggattagtcg 972  Q
    ||| ||| |||||||||||||||    
T  31588742 ctacgcatgagccggattagtcg 31588764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 921 - 976
Target Start/End: Complemental strand, 42722463 - 42722408
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 976  Q
    |||||||| ||||  ||||||||||| ||||||||| ||| |||||||||||||||    
T  42722463 ggaacaacacttgaccagtgcgcatacctctatgcatgagtcggattagtcgtcca 42722408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 852 - 970
Target Start/End: Original strand, 48656176 - 48656295
Alignment:
Q  852 tttgggctccagtggcaaggagctccta-ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctc 950  Q
    |||||||||||||||||||  ||||||  |||||||||||  || ||||||||| | || |||| ||||| ||||||||||||  | |||| |||  |||    
T  48656176 tttgggctccagtggcaagacgctcctttccaaggacgtacccgagaaatatcgggctcaattcccaggaagaacaacgcttgacctgtgcacatgcctc 48656275  T
Q  951 tatgcacgagccggattagt 970  Q
    | |||| |||| ||||||||    
T  48656276 tctgcatgagctggattagt 48656295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 852 - 890
Target Start/End: Complemental strand, 34667755 - 34667717
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgta 890  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  34667755 tttgggctctagtggcaaggagctccttccaaggacgta 34667717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 921 - 1018
Target Start/End: Complemental strand, 48015157 - 48015060
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    |||||||||||||| |||||||||   ||||| ||||||||||||||||| | |||  |||| || ||| |||||||||||||||| ||| | ||||||    
T  48015157 ggaacaacgcttggccagtgcgcaagcctctacgcacgagccggattagtagcccaattttgatg-gatcggaaaccggtgcgaaagcaaaaaaaaaaa 48015060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 853 - 890
Target Start/End: Original strand, 14567210 - 14567247
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgta 890  Q
    |||||||||||||||||||||||| | |||||||||||    
T  14567210 ttgggctccagtggcaaggagctcattccaaggacgta 14567247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 853 - 890
Target Start/End: Complemental strand, 27531809 - 27531772
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgta 890  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  27531809 ttggactccagtggcaaggagctccttccaaggacgta 27531772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 852 - 945
Target Start/End: Complemental strand, 40272484 - 40272391
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    |||||||||| |||| ||||||||| | |||| || |||| || | ||||||| |||| |||  || | |||||||||||||| ||||||||||    
T  40272484 tttgggctccggtggtaaggagctctttccaatgatgtatccggggaatatcgggttcgatttccatggggaacaacgcttggccagtgcgcat 40272391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 2e-33; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 853 - 982
Target Start/End: Original strand, 1797417 - 1797546
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| |||| | |||||||||||| |||||||||| ||||||    
T  1797417 ttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctcta 1797516  T
Q  953 tgcacgagccggattagtcgtccatctttg 982  Q
     |||||||||||| ||||||||||||||||    
T  1797517 cgcacgagccggactagtcgtccatctttg 1797546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 853 - 1018
Target Start/End: Original strand, 48804640 - 48804805
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| || | |||||||| ||||| ||||||||||  |||||    
T  48804640 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctcta 48804739  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
     ||| ||||||||||||||||||| | |||||| |  |||||||||||||||| ||| | ||||||    
T  48804740 cgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaagcaaaaaaaaaaa 48804805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 4195354 - 4195202
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| ||||||| |||  |||||||||||||  ||||  |||||||||  |||||    
T  4195354 ttgggctccagtggcaaggagctcctgccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtgcgcatgcctcta 4195255  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| |||||||||||| |||||| | |||||| | ||||||||| |||||||    
T  4195254 cgcatgagccggattagccgtccaccattggtgggttggaaaccgatgcgaaa 4195202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 17748535 - 17748382
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| ||||||||| |||| || |||||||||||| || | |||| || |||| |||| |||| |||||||||||||| ||||||||||  ||||    
T  17748535 tttgggctctagtggcaagcagcttcttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctct 17748436  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | | ||||||||||||||||||||| ||||| || |  |||||||| |||||||    
T  17748435 acgtacgagccggattagtcgtccacctttgttgggtcggaaaccgatgcgaaa 17748382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 34659182 - 34659335
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| ||| ||| |||  || | |||| || |||| ||||||| | |||||||||||||  ||||||||||  ||||    
T  34659182 tttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctct 34659281  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||||||||||||||||||| ||| | ||||||||  | ||||||||||||||    
T  34659282 acgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcgaaa 34659335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 22993519 - 22993367
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||| ||||||||||||||||||||| |||||||||||  || | ||||||| |||| ||||  |||||||||||||||||| ||||| ||||  |||||    
T  22993519 ttggactccagtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctcta 22993420  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     |||||| ||||||||||||  || |||||||| |   |||||||||||||||    
T  22993419 cgcacgaaccggattagtcgctcacctttggtgggtcagaaaccggtgcgaaa 22993367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 852 - 985
Target Start/End: Complemental strand, 5039571 - 5039438
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||  || |||| || | |||| ||||||| ||||  |||||||||||| |||||||||||| |||| ||||    
T  5039571 tttgggctccagtggcaaggagctccttccatagatgtattcggggaataccgagttcgattcctaggaggaacaacacttggtcagtgcacatacctct 5039472  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | ||| |||||||||||||||  || ||||||||    
T  5039471 acgcatgagccggattagtcgctcacctttggtg 5039438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 852 - 985
Target Start/End: Original strand, 23658136 - 23658268
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| | |||||||||  |  | |||||| ||||| |||  |||| |||||||||||||| ||||| ||||  ||||    
T  23658136 tttgggctccagtggcaaggagctccttc-aaggacgtacccagggaatatccagttcgatttccagggggaacaacgcttggccagtgtgcatgcctct 23658234  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    |  |||||||||||||||||||||||||||||||    
T  23658235 acacacgagccggattagtcgtccatctttggtg 23658268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 853 - 1001
Target Start/End: Original strand, 13095815 - 13095963
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||| ||||||||||||||||  ||||||||||  || | |||| || ||||||||| |||| |||||||| ||||| ||||||||||  |||||    
T  13095815 ttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctcta 13095914  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 1001  Q
     ||| |||||||||||||||  || |||||||| |  ||||||||||||    
T  13095915 cgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgc 13095963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 47341833 - 47341985
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||| | |||||||||||  || | |||| ||||||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  47341833 ttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgcgcatgcctcta 47341932  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     |||||||| ||||| ||||| || | |||||| |  ||||| ||||||||||    
T  47341933 cgcacgagcaggattggtcgttcaccattggtgggtcggaaatcggtgcgaaa 47341985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 858 - 1005
Target Start/End: Complemental strand, 10048023 - 10047876
Alignment:
Q  858 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 957  Q
    ||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| |||| |||||||| ||||| |||||||||   ||||| |||     
T  10048023 ctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcat 10047924  T
Q  958 gagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| | |||||||||||| | |||||| |  ||||||||||||||||    
T  10047923 gagcagaattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 10047876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 5069968 - 5069815
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||||||||| || | |||||||||  || |||||| || |||| |||  ||||||||||||||||| |  |||| ||||  ||||    
T  5069968 tttgggctccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgcatgcctct 5069869  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | |||| |||||||||||||| ||| |||||||| |  |||||||| |||||||    
T  5069868 acgcacaagccggattagtcgcccacctttggtgggtcggaaaccgatgcgaaa 5069815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 880 - 1005
Target Start/End: Complemental strand, 38578992 - 38578867
Alignment:
Q  880 ccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatct 979  Q
    |||||||||||  || | ||||||| |||| |||| |||| |||||||||||||| ||||||||||  ||||| ||| ||||||||||||||| ||| ||    
T  38578992 ccaaggacgtacccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacct 38578893  T
Q  980 ttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||| |  ||||||||||||||||    
T  38578892 ttggtgggtcggaaaccggtgcgaaa 38578867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 43346932 - 43346779
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||||||||||||||||||||| |||| |||||||  | | |||| || |||| ||||||| | |||||||| ||||| | ||||||||  ||||    
T  43346932 tttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgcgcatgcctct 43346833  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | | |||||||||||||||||  ||||||||||| |  ||||||| ||||||||    
T  43346832 acgtacgagccggattagtcgctcatctttggtgggtcggaaaccagtgcgaaa 43346779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 853 - 970
Target Start/End: Original strand, 43925469 - 43925586
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||| ||||||||||||||||  |||||    
T  43925469 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctcta 43925568  T
Q  953 tgcacgagccggattagt 970  Q
     ||| |||| ||||||||    
T  43925569 cgcatgagctggattagt 43925586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 854 - 972
Target Start/End: Original strand, 16802081 - 16802199
Alignment:
Q  854 tgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctat 953  Q
    |||||||||||||||| |||||||| |||||||||||  || | |||| ||  ||| ||||| ||||||||||||| |||| ||||||| ||  |||||     
T  16802081 tgggctccagtggcaatgagctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctac 16802180  T
Q  954 gcacgagccggattagtcg 972  Q
    |||||||||||||||||||    
T  16802181 gcacgagccggattagtcg 16802199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 985
Target Start/End: Original strand, 22973923 - 22974056
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| | |||| |||||||||| |||||||||||  || | |||| || |||| ||||||||| |||||||||||||| ||||| ||||   |||    
T  22973923 tttgggctctaatggcgaggagctccttccaaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtct 22974022  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | ||| ||||| ||||||||||||| ||||||||    
T  22974023 acgcatgagccagattagtcgtccacctttggtg 22974056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 852 - 928
Target Start/End: Original strand, 9685695 - 9685771
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaac 928  Q
    ||||||||||||||||||||||||||| ||||| |||||| || | ||||||| |||| ||||||||||||||||||    
T  9685695 tttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggttcgattctcaggaggaacaac 9685771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 854 - 1004
Target Start/End: Original strand, 18785627 - 18785777
Alignment:
Q  854 tgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctat 953  Q
    ||||||||||||||||| ||||||| |||||||||||  || | |||| || |||| ||||  ||| |||||||| ||||| ||||||||||  |||||     
T  18785627 tgggctccagtggcaagaagctccttccaaggacgtacccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctac 18785726  T
Q  954 gcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaa 1004  Q
    ||| || | ||||||||||| || || ||||| |  |||||||||||||||    
T  18785727 gcatgaactggattagtcgttcacctctggtgggtcggaaaccggtgcgaa 18785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 26423440 - 26423288
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||| | ||||| |||||||||||  |  | |||| || |||| |||| |||| | |||||||||||| |||||| | |  ||||    
T  26423440 tttgggctccagtggcaagaaactccttccaaggacgtacccaaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcacctgcctct 26423341  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||||||||| |||||||||| || |||||||| |  ||||||||||||||||    
T  26423340 acgcacgagccagattagtcgttcacctttggtg-gtcggaaaccggtgcgaaa 26423288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 921 - 1018
Target Start/End: Original strand, 39474965 - 39475062
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||| ||| |  | ||||| |||||||| ||| | ||||||    
T  39474965 ggaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaaccagtgcgaaagcaaaaaaaaaaa 39475062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 921 - 1005
Target Start/End: Original strand, 41945498 - 41945582
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| ||||||||| ||||||||||  ||||| ||||||||||||||||||||||| |||||||| |  ||||| ||||||||||    
T  41945498 ggaataacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaa 41945582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 852 - 963
Target Start/End: Original strand, 46414631 - 46414742
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||| ||||||||||||||||   |||||||||  |||| |||| | ||||| |||||||||| ||| ||||||||| || |||||||  ||||    
T  46414631 tttgggctcccgtggcaaggagctccttttaaggacgtacccgtggaataccaagttcgattctcaggatgaataacgcttggccaatgcgcatgcctct 46414730  T
Q  952 atgcacgagccg 963  Q
    | ||||||||||    
T  46414731 acgcacgagccg 46414742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 43862125 - 43861972
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| || |||||||||||| | |||| |||||||  | | |||| || |||| |||| |||| ||||||||| |||| ||||||||||  ||||    
T  43862125 tttgggctctagcggcaaggagctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctct 43862026  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    | ||| |||||||||||||| | || |||||||| ||| | ||||||||||||||    
T  43862025 acgcatgagccggattagtcattcacctttggtg-gatcgaaaaccggtgcgaaa 43861972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 14650273 - 14650426
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||| ||||||||||||||||| |||||||||||  ||   ||||||| |||| |||  |||||||||||| |||||  ||||||  ||  ||||    
T  14650273 tttggactctagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgatttccaggaggaacaatgcttgaccagtgcatatgcctct 14650372  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||||||| |||||||  || |||||||| | || ||||||||||||||    
T  14650373 acgcatgagccgggttagtcgctcacctttggtgggttgaaaaccggtgcgaaa 14650426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 856 - 1005
Target Start/End: Original strand, 21530708 - 21530857
Alignment:
Q  856 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 955  Q
    ||||||||||||||||||||||| |||||||||||   | | ||||  | |||  |||| |||| |||||||| |||||||||||| |||  ||||| ||    
T  21530708 ggctccagtggcaaggagctccttccaaggacgtacctggggaatactgggtttgattcccagggggaacaacacttggtcagtgcacatgcctctacgc 21530807  T
Q  956 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||| |||| |||  || |||||||| |  |||||||||| |||||    
T  21530808 acgagccgaattaatcgctcacctttggtgggtcggaaaccggttcgaaa 21530857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 1605897 - 1606050
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||||| || |||||||||||| |||||||||||  ||   |||| |  |||| |||  |||| |||||||||||||| |||||| |||  ||||    
T  1605897 tttggactccaatgacaaggagctccttccaaggacgtacccggagaatacctggttcgatttccagggggaacaacgcttggccagtgcacatgcctct 1605996  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    | ||  ||||||||||||||| ||| |||||||| ||| ||||||||||||||||    
T  1605997 aggcttgagccggattagtcgcccacctttggtg-gatcggaaaccggtgcgaaa 1606050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 881 - 999
Target Start/End: Complemental strand, 28396284 - 28396166
Alignment:
Q  881 caaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 980  Q
    |||| |||||| || ||||||||| |||| ||||||||| |||||||||||| |   ||||||||  || || ||| ||||||||||||||||| | |||    
T  28396284 caagaacgtatccgggaaatatcgggttcaattctcagggggaacaacgcttagctggtgcgcatgcctttacgcatgagccggattagtcgtctacctt 28396185  T
Q  981 tggtgtgatggaaaccggt 999  Q
    ||||| |  ||||||||||    
T  28396184 tggtgggtcggaaaccggt 28396166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 853 - 970
Target Start/End: Original strand, 365097 - 365214
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||| ||||| || |||||||| ||||  |||||| || | |||| || |||| |||| |||||||||||||||||  |||||||||||  |||||    
T  365097 ttgggctctagtggtaaagagctccttccaaaaacgtatccgaggaataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcatgcctcta 365196  T
Q  953 tgcacgagccggattagt 970  Q
     ||| ||||| |||||||    
T  365197 cgcatgagcctgattagt 365214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 852 - 985
Target Start/End: Complemental strand, 4973263 - 4973130
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||| || ||||||||| || |||||||| ||| || | ||||||| |||| ||||  | | |||| ||| ||||  || |||||||  ||||    
T  4973263 tttgggctccactgacaaggagcttcttccaaggacttattcggggaatatcgggttcgattcctacggggaataacacttgaccaatgcgcatgcctct 4973164  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | | ||||||||||||||||||||| ||||||||    
T  4973163 acgtacgagccggattagtcgtccagctttggtg 4973130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 8734839 - 8734686
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||  |||||||||||||||||| |||||||| |||    | ||||||  |||| |||    || ||||||| |||||| ||||||||||  |||     
T  8734839 tttgggcgtcagtggcaaggagctccttccaaggacatatctcgggaatatcaggttcgatttcttgggggaacaatgcttgggcagtgcgcatgcctca 8734740  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||||||||| ||||||||| ||| |||||||| |  ||||||||||||||||    
T  8734739 acgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 8734686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 852 - 985
Target Start/End: Complemental strand, 36619407 - 36619274
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||| ||||||||||| |||||  |||||||||||  | | |||| || |||| |||| |||| |||||||| ||||  ||||| ||||  ||||    
T  36619407 tttggactctagtggcaaggaactccttgcaaggacgtatttggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctct 36619308  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | ||| ||||||||||||||||||| | ||||||    
T  36619307 acgcatgagccggattagtcgtccaccattggtg 36619274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 921 - 1005
Target Start/End: Original strand, 28744187 - 28744271
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||| |||||| |||| |||||| |||||   ||||||||||||||||||||| |||||||| |  |||||| |||||||||    
T  28744187 ggaacaatgcttggccagtacgcatacctctacatacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 28744271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 921 - 973
Target Start/End: Original strand, 37514946 - 37514998
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgt 973  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||| ||||    
T  37514946 ggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatcgt 37514998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 852 - 972
Target Start/End: Complemental strand, 45960155 - 45960036
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||| |||||||| ||||||||||| | |||||||||||| || | |||| ||||||  |||| || | | |||||| ||||||||||||||||  ||||    
T  45960155 tttgagctccagtagcaaggagctctttccaaggacgtat-cggggaataccgagtttgattcccaagggcaacaacacttggtcagtgcgcatgcctct 45960057  T
Q  952 atgcacgagccggattagtcg 972  Q
    | |||  ||||||||||||||    
T  45960056 acgcataagccggattagtcg 45960036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 871 - 1018
Target Start/End: Complemental strand, 21190914 - 21190767
Alignment:
Q  871 gagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagt 970  Q
    |||||||| |||||||| ||| || | |||| || |||| ||||  ||||||| ||||||||||  |||||||||  ||||| ||||||| | |||||||    
T  21190914 gagctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgagtcagattagt 21190815  T
Q  971 cgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    || |||||  ||||| |  | |||||||||||||| ||| | ||||||    
T  21190814 cgcccatcaatggtgggtcgaaaaccggtgcgaaagcaaaaaaaaaaa 21190767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 852 - 1018
Target Start/End: Complemental strand, 27875240 - 27875075
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||| ||||||| |||| |||||||  | | |||| ||  ||| |||| |||| |||| ||| ||||| |||||| |||  ||||    
T  27875240 tttgggctccagtggcaagtagctccttccaa-gacgtatctggggaataccggattcgattcccagggggaataacacttggccagtgcacatgcctct 27875142  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    | ||| ||| || |||||||||||| |||| ||| |  | ||||||||||||||  |||| ||||||    
T  27875141 acgcatgagtcgcattagtcgtccacctttagtgggtcgaaaaccggtgcgaaaaaaagaaaaaaaa 27875075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 852 - 982
Target Start/End: Original strand, 42032052 - 42032182
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||| ||||| ||||||| |||||||||||  || | |||| |  |||| |||| || | ||||||||| |||| |||||| ||||  |||    
T  42032052 tttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtgcacatacatct 42032151  T
Q  952 atgcacgagccggattagtcgtccatctttg 982  Q
    | ||| |||||| |||||| ||||| |||||    
T  42032152 acgcatgagccgaattagttgtccacctttg 42032182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 861 - 982
Target Start/End: Original strand, 3353390 - 3353510
Alignment:
Q  861 cagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgag 960  Q
    |||||||||||||||| |   ||||||||||    | ||||||| | || ||||||||| | ||||||  |||| ||||||||||  ||||| |||||||    
T  3353390 cagtggcaaggagctcattataaggacgtatctagggaatatcgggatcgattctcagg-gaaacaacatttggccagtgcgcatgcctctacgcacgag 3353488  T
Q  961 ccggattagtcgtccatctttg 982  Q
    |||||||||||||||| |||||    
T  3353489 ccggattagtcgtccacctttg 3353510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 853 - 890
Target Start/End: Complemental strand, 19914854 - 19914817
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgta 890  Q
    |||||||||||||||||||||||||| |||||||||||    
T  19914854 ttgggctccagtggcaaggagctccttccaaggacgta 19914817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 852 - 945
Target Start/End: Complemental strand, 22268182 - 22268089
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    ||||||||||||||||||||||||| | |||||||||||   | | |||| || |||| |||| |||| ||||||||  |||| ||||||||||    
T  22268182 tttgggctccagtggcaaggagctcattccaaggacgtacttggggaataccgggttcgattcccagggggaacaacatttggccagtgcgcat 22268089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 27028235 - 27028388
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| |||| |||||||||||||| | ||||| |||||   | |||||| |  |||| |||  |||| |||||||| ||||| ||||||||||  ||||    
T  27028235 tttggactccggtggcaaggagctcattccaagaacgtacctgggaaataccaggttcgatttccagggggaacaacacttggccagtgcgcatgcctct 27028334  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |  || |||| ||||||||||  || |||||||| |  ||||||||||||||||    
T  27028335 acacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 27028388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 29805592 - 29805440
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||||||||| |||||| ||||  ||||||||||| ||   |||| ||||||| ||||  | | ||||||||| ||||||||||||||| |||||    
T  29805592 tttggactccagtggtaaggagatcctttcaaggacgtattcggagaataccgagttcgattcatatg-ggaacaacgtttggtcagtgcgcatgtctct 29805494  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| |||||  |||| ||||| | |||| ||| |  ||||||| ||||||||    
T  29805493 acgcatgagccaaattaatcgtctacctttagtgagtcggaaaccagtgcgaaa 29805440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 921 - 1001
Target Start/End: Original strand, 39420862 - 39420942
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 1001  Q
    |||||||||||||| |||||||| |  ||||| ||| ||||||||||||||||| | ||||| || |  ||||||||||||    
T  39420862 ggaacaacgcttggccagtgcgcgtgcctctacgcatgagccggattagtcgtctacctttgatgggccggaaaccggtgc 39420942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 852 - 891
Target Start/End: Complemental strand, 4228904 - 4228865
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtat 891  Q
    |||||||||||| |||||||||||||| ||||||||||||    
T  4228904 tttgggctccagcggcaaggagctccttccaaggacgtat 4228865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 853 - 904
Target Start/End: Original strand, 11607088 - 11607139
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcg 904  Q
    |||||||||||||||||||| ||||| |||||||||||| || | |||||||    
T  11607088 ttgggctccagtggcaaggaactccttccaaggacgtattcggggaatatcg 11607139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 853 - 930
Target Start/End: Complemental strand, 34127772 - 34127695
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgc 930  Q
    |||||||||| ||||||||| ||||| |||||||||||  || | |||| || |||| ||||  ||||||||||||||    
T  34127772 ttgggctccaatggcaaggaactccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgc 34127695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 1e-31; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 855 - 1005
Target Start/End: Original strand, 26325769 - 26325919
Alignment:
Q  855 gggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatg 954  Q
    ||||||||||||||||||||||||  ||||||||||| || | ||||||| |||| |||| |||  |||||||| ||||||||||||||||  ||||| |    
T  26325769 gggctccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacg 26325868  T
Q  955 cacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    || ||||||||||||||||||| | |||||| |  ||||||||||||||||    
T  26325869 catgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 26325919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 5855476 - 5855629
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||||||||||| || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  ||||    
T  5855476 tttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctct 5855575  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||| |||||||||||| || |||| ||| |  |||||||| |||||||    
T  5855576 acgcatgaggcggattagtcgttcacctttagtgggtcggaaaccgatgcgaaa 5855629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 41664010 - 41663857
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| | |||||||||| || | |||| || |||| |||| |||| |||||||| ||||||||||||||||  ||||    
T  41664010 tttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctct 41663911  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| |||| |||||||||||||| | |||||| |  ||||||||||||||||    
T  41663910 acgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 41663857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 8763946 - 8764098
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||| |||||||||||||||| |||||||||||  || | ||||||| ||||  ||| |||| |||||||| ||||| ||||||||||  |||||    
T  8763946 ttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctcta 8764045  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||||||||||||||||||||||| | |||||| |  ||||||||||||||||    
T  8764046 cgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcgaaa 8764098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 43959974 - 43959822
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||||| |||||| |||| ||||||  || | ||||||| |||| |||| |||| |||||||||||||| ||||||||||  |||||    
T  43959974 ttgggctccagtggcaaggtgctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctcta 43959875  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
     ||||||||||||||||||| ||| |||| ||| ||| ||||||||||||||||    
T  43959874 cgcacgagccggattagtcgcccacctttagtg-gatcggaaaccggtgcgaaa 43959822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 850 - 1005
Target Start/End: Complemental strand, 45362038 - 45361883
Alignment:
Q  850 tttttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatct 949  Q
    |||||||||| |||||||||||||||||| |||||||||||  |  | |||| || |||| |||||||||||||||||||||||| ||||||||||  |     
T  45362038 tttttgggcttcagtggcaaggagctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgcca 45361939  T
Q  950 ctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||| |||  ||||||||||||||| || |||| ||| |  ||||||||||||||||    
T  45361938 ctacgcataagccggattagtcgttcacctttagtgggtcggaaaccggtgcgaaa 45361883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 10422742 - 10422895
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||| |||||||||||||||||| |||| ||||||| || | |||| || |||| |||   |||||||||||| ||||| ||||||||||  ||||    
T  10422742 tttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgcgcatgcctct 10422841  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||||||||||||||||||| |||||||  |  ||||||||||||||||    
T  10422842 acgcatgagccggattagtcgtccacctttggtaagtcggaaaccggtgcgaaa 10422895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 17642158 - 17642005
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||| |||||||||||| ||| |||||||  |  ||||||  | |||| |||| |||| |||||||| ||||| ||||||||||  ||||    
T  17642158 tttgggctccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgcgcatgcctct 17642059  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||||||||||||||||||||||| |||||||| |  |||||| |||||||||    
T  17642058 acgcacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 17642005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 18915821 - 18915974
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||| ||||||||||||||| || |||||||||||  || | |||| || |||| |||| |||| |||||||| ||||| ||||| ||||  ||||    
T  18915821 tttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctct 18915920  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | |||||||||||||||||||  || | |||||| | |||||||||||||||||    
T  18915921 acgcacgagccggattagtcgctcaccattggtgggttggaaaccggtgcgaaa 18915974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 852 - 984
Target Start/End: Complemental strand, 33418269 - 33418137
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||| ||||||  ||   |||| ||  ||| ||||  ||| || ||||||||||| ||||||||||  ||||    
T  33418269 tttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgcgcatgcctct 33418170  T
Q  952 atgcacgagccggattagtcgtccatctttggt 984  Q
    ||||||||||||||||||||||||| |||||||    
T  33418169 atgcacgagccggattagtcgtccacctttggt 33418137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 49078069 - 49078221
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| | |||||||||| || | |||| || |||| |||| |||| | |||||| ||||| ||||||||||  |||||    
T  49078069 ttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctcta 49078168  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| |||||||||||||||| || | |||||  |  ||||||||||||||||    
T  49078169 cgcatgagccggattagtcgttcaccattggtaggtcggaaaccggtgcgaaa 49078221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 852 - 974
Target Start/End: Original strand, 32825 - 32947
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||| |||||||| |||||||||||   | | ||||||| || | |||| |||||||||||||||||||||||||| |||  ||||    
T  32825 tttgggctccagtggcaatgagctccttccaaggacgtaccgggggaatatcgggtccgattcccaggaggaacaacgcttggtcagtgcacatgcctct 32924  T
Q  952 atgcacgagccggattagtcgtc 974  Q
    | ||| |||||| ||||||||||    
T  32925 acgcatgagccgaattagtcgtc 32947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 50371988 - 50371835
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| ||||||||||||||||| | ||||| ||||  |  ||||| || |||| ||| |||||| ||||||||||||| |||| |||||   |||    
T  50371988 tttgggctcaagtggcaaggagctccttctaaggatgtatctgaaaaatagcgtgttcgattttcaggaagaacaacgcttggccagtacgcatgcttct 50371889  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    | |||| |||||||||||||| |||||||||||| ||| ||||||||||||||||    
T  50371888 acgcacaagccggattagtcgcccatctttggtg-gatcggaaaccggtgcgaaa 50371835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 854 - 982
Target Start/End: Original strand, 10336472 - 10336600
Alignment:
Q  854 tgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctat 953  Q
    |||| |||||||||||||||||||| |||| ||||||| ||   ||||||| |||| ||| ||||| |||||||||||||  ||||||||||  |||||     
T  10336472 tgggttccagtggcaaggagctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctac 10336571  T
Q  954 gcacgagccggattagtcgtccatctttg 982  Q
    ||| ||||||||||| ||||||| |||||    
T  10336572 gcatgagccggattaatcgtccacctttg 10336600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 851 - 1018
Target Start/End: Complemental strand, 30927882 - 30927715
Alignment:
Q  851 ttttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctc 950  Q
    |||||| ||||||||||||||||||||| |||||||||||   | ||||||||| |||| |||  |||  |||||||||||||| || || ||||  |||    
T  30927882 ttttggactccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctc 30927783  T
Q  951 tatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    || ||| |||||||||||||||||||  ||||||| |   ||||||||||| ||| ||| | ||||||    
T  30927782 tacgcatgagccggattagtcgtccacttttggtgggtcagaaaccggtgcaaaagcaaaaaaaaaaa 30927715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 856 - 1018
Target Start/End: Complemental strand, 9659328 - 9659167
Alignment:
Q  856 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 955  Q
    ||||||||||||||||||||| | | |||||||||  || | |||| || |||| |||| |||| ||||||||| |||   |||||||||  || || ||    
T  9659328 ggctccagtggcaaggagctcattctaaggacgtactcggggaataccgggttcgattcccagg-ggaacaacgtttgactagtgcgcatgcctttacgc 9659230  T
Q  956 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    | ||||||||||||||||||| |||||||| | ||||||||||||||||| ||| | ||||||    
T  9659229 atgagccggattagtcgtccacctttggtgggttggaaaccggtgcgaaagcaaaaaaaaaaa 9659167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 862 - 984
Target Start/End: Complemental strand, 17092621 - 17092499
Alignment:
Q  862 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagc 961  Q
    ||||||||| |||||||  || |||||||| || |||||||||||||| ||| ||||| | ||||||| |||| ||||| | ||  ||||| ||||||||    
T  17092621 agtggcaagaagctcctttcatggacgtattcgggaaatatcgagttcgattttcaggggaaacaacgattggccagtgtgtatgcctctacgcacgagc 17092522  T
Q  962 cggattagtcgtccatctttggt 984  Q
    ||||||||||||||| |||||||    
T  17092521 cggattagtcgtccacctttggt 17092499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 853 - 1018
Target Start/End: Complemental strand, 2981084 - 2980919
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||| ||||||||||||||||| ||| |||||||| || | ||||  | |||| |||| |||  |||||||| ||||| ||||| ||||  |||||    
T  2981084 ttgggctctagtggcaaggagctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgtgcatgcctcta 2980985  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
     ||||||| |||||||||||||||| ||| ||| |  ||||| |||||||||| ||| | ||||||    
T  2980984 cgcacgagtcggattagtcgtccatgtttagtgggtcggaaatcggtgcgaaagcaaaaaaaaaaa 2980919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 10173125 - 10172972
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||||| |||||| ||||||||||||  | | |||| ||  ||| |||| ||  | ||||||||||||| |||||| |||  ||||    
T  10173125 tttgggctccagtggcaaggtgctccttccaaggacgtatctggggaataccggattcaattcccataaagaacaacgcttggccagtgcccatgcctct 10173026  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||||||||||| ||| ||| |||||||| |  ||||||||||||||||    
T  10173025 acgcatgagccggattactcgcccacctttggtgggtcggaaaccggtgcgaaa 10172972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 853 - 982
Target Start/End: Complemental strand, 33498992 - 33498863
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||||||| ||||   ||||| |||   |  ||||| || |||| ||||||||||||| |||||||||| ||||||||||  |||||    
T  33498992 ttgggctccagtggcaaggagttccttttaaggatgtacctggaaaataccgggttcgattctcaggaggagcaacgcttggccagtgcgcatgcctcta 33498893  T
Q  953 tgcacgagccggattagtcgtccatctttg 982  Q
     ||| ||||||||||||||||||| |||||    
T  33498892 cgcatgagccggattagtcgtccacctttg 33498863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 858 - 982
Target Start/End: Complemental strand, 14254416 - 14254292
Alignment:
Q  858 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 957  Q
    |||||| |||||||| ||| | |||||||||||| || | |||| ||||||| ||| ||||| |||||||||||||| |||| |||||  || || |||     
T  14254416 ctccaggggcaaggaactcattccaaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcat 14254317  T
Q  958 gagccggattagtcgtccatctttg 982  Q
    ||||||||||||||||||| |||||    
T  14254316 gagccggattagtcgtccacctttg 14254292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 855 - 971
Target Start/End: Complemental strand, 48798221 - 48798105
Alignment:
Q  855 gggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatg 954  Q
    |||||||||||||||||||||||| |||| ||||||| || | ||||||| |||| |||  |||| |||||||||||||   |||||||||  ||||| |    
T  48798221 gggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgcgcatgcctctacg 48798122  T
Q  955 cacgagccggattagtc 971  Q
    || ||||||||||||||    
T  48798121 catgagccggattagtc 48798105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 2567230 - 2567383
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||| || ||||||||||||||| |||||||||||| ||   |||| || |||| ||| || ||   |||||||||||| ||||||||||  ||||    
T  2567230 tttgggcttcactggcaaggagctccttccaaggacgtattcggagaataccgggttcgattttcggggaaaacaacgcttggccagtgcgcatgcctct 2567329  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |  |||||| | |||||| ||||||||||||||| |  |||||||||| |||||    
T  2567330 actcacgagtcagattagccgtccatctttggtgggtcggaaaccggtacgaaa 2567383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 5503985 - 5504138
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||| |||||||||||||||||||| || || ||||||  | | ||||||  |||| |||||||||   ||||||||||| | ||||| |||  ||||    
T  5503985 tttgggttccagtggcaaggagctccttccgagaacgtatctggggaatatcaggttcgattctcagggaaaacaacgcttgattagtgcacatgcctct 5504084  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||||||||||||||||||| ||||| || |  |||||||||| |||||    
T  5504085 acgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtacgaaa 5504138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 853 - 1018
Target Start/End: Complemental strand, 11398041 - 11397877
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| ||||||| |||| ||   |||| || |||| ||||  ||| ||||||||| |||| || |||| ||  |||||    
T  11398041 ttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcgattccgagg-ggaacaacgtttggccaatgcgtatgcctcta 11397943  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
     ||| ||| ||||||||||||||| |||||||| |  ||||| |||||||||| ||| | ||||||    
T  11397942 cgcatgagtcggattagtcgtccacctttggtgggtcggaaatcggtgcgaaagcaaaaaaaaaaa 11397877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 852 - 1001
Target Start/End: Complemental strand, 31576701 - 31576552
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| ||||||||||||||| | | |||||||||| |   ||||| || |||| ||||||||| | ||||| |||||| || ||||  |  ||||    
T  31576701 tttgggctctagtggcaaggagctcattctaaggacgtatcccgaaaataccgggttcgattctcaggggaaacaatgcttggccaatgcgtgtgcctct 31576602  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 1001  Q
    | ||| ||||||| ||||||||||||||||| ||||  ||||||||||||    
T  31576601 acgcatgagccggcttagtcgtccatctttgatgtgtcggaaaccggtgc 31576552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 924 - 1005
Target Start/End: Original strand, 37339846 - 37339927
Alignment:
Q  924 acaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||| ||||||||||  ||| | ||||||||||||||||||| ||| |||||||| | |||||||||||||||||    
T  37339846 acaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaaccggtgcgaaa 37339927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 852 - 972
Target Start/End: Complemental strand, 32151076 - 32150956
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||||||||| | || | ||||||  |||| |||  |||| ||||||||  |||||||||||||||  || |    
T  32151076 tttgggctccagtggcaaggagctccttccaaggacgttttcgaggaatatcaggttcgatttccagggggaacaacatttggtcagtgcgcatgccttt 32150977  T
Q  952 atgcacgagccggattagtcg 972  Q
    | ||| |||||| ||||||||    
T  32150976 acgcatgagccgaattagtcg 32150956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 862 - 1018
Target Start/End: Complemental strand, 50503505 - 50503349
Alignment:
Q  862 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagc 961  Q
    |||||| ||||||||||  ||||||||||| || | ||||||| |||| |||| |||| |||||||| ||||  ||||||||||  ||||| ||||||||    
T  50503505 agtggcgaggagctcctttcaaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagc 50503406  T
Q  962 cggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    |||||| |||| ||| |  ||||| |  |||||||| ||||||| ||| | ||||||    
T  50503405 cggatttgtcgcccaccaatggtgggtcggaaaccgatgcgaaagcaaaaaaaaaaa 50503349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 853 - 971
Target Start/End: Complemental strand, 33004168 - 33004050
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||   |||||||||| |||||||||||| || | |||||||  ||| |||  |||| | ||||| |||||| ||||||||||  |||||    
T  33004168 ttgggctccagtgatgaggagctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctcta 33004069  T
Q  953 tgcacgagccggattagtc 971  Q
     ||||||||||||||||||    
T  33004068 cgcacgagccggattagtc 33004050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 863 - 984
Target Start/End: Complemental strand, 5063986 - 5063866
Alignment:
Q  863 gtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagcc 962  Q
    |||||||| ||||||| ||||||||||||  | | ||||| |  ||| ||||| ||| || ||||||||||| ||||||| || |||||||||||||||     
T  5063986 gtggcaagaagctccttccaaggacgtatctggggaatattggattcgattcttagg-ggcacaacgcttggccagtgcgtatgtctctatgcacgagct 5063888  T
Q  963 ggattagtcgtccatctttggt 984  Q
    |||||||||| ||| |||||||    
T  5063887 ggattagtcgcccacctttggt 5063866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 864 - 1005
Target Start/End: Original strand, 16956432 - 16956573
Alignment:
Q  864 tggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccg 963  Q
    ||||||||||||||| |||||||||||  || | |||| || ||||  |||||||| | ||||||| |||  ||||||||||  ||||| ||||||||||    
T  16956432 tggcaaggagctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcctctacgcacgagccg 16956531  T
Q  964 gattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||   || |||||||| |  ||||||| ||||||||    
T  16956532 gattagtcactcacctttggtgggtcggaaaccagtgcgaaa 16956573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 856 - 973
Target Start/End: Complemental strand, 25178725 - 25178609
Alignment:
Q  856 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 955  Q
    |||||||||| ||| |||||||||| ||||||||||  | |||||| ||||||||||||  | | |||| ||||||||| ||||||||||| |||||       
T  25178725 ggctccagtgacaatgagctcctactaaggacgtatttgggaaataccgagttctattcctaag-ggaataacgcttggccagtgcgcatacctctacag 25178627  T
Q  956 acgagccggattagtcgt 973  Q
    || |||||||||||||||    
T  25178626 acaagccggattagtcgt 25178609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 853 - 1018
Target Start/End: Complemental strand, 40288630 - 40288465
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||| ||||||||||||||| | |||||||||||| || | |||| || |||| |||  |||| ||||||||| |||| ||||  ||||  |||||    
T  40288630 ttgggctcgagtggcaaggagctctttccaaggacgtattcggggaataccgggttcgatttccagggggaacaacggttggccagtatgcatgcctcta 40288531  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
      ||||||||||||||||||  |||| |||||| |  ||||||| |||| ||| ||| | ||||||    
T  40288530 cacacgagccggattagtcgctcatccttggtgggtcggaaaccagtgcaaaagcaaaaaaaaaaa 40288465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 930 - 1018
Target Start/End: Complemental strand, 4581758 - 4581670
Alignment:
Q  930 cttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    ||||| ||||||||||  ||||| |||||||||||| |||||||||| |||||||| |  |||||||||||||||| ||| | ||||||    
T  4581758 cttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaagcaaaaaaaaaaa 4581670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 853 - 985
Target Start/End: Complemental strand, 45726586 - 45726454
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||| |||| || ||||  |||||||||||  || | |||| |  |||| |||||||||||||| |||  |||| ||||||| || ||||||    
T  45726586 ttgggctccagttgcaaagacctccctccaaggacgtacccgaggaatacctggttcgattctcaggaggaataacatttggccagtgcgtatgtctcta 45726487  T
Q  953 tgcacgagccggattagtcgtccatctttggtg 985  Q
     ||| |||||||||||||||| || ||||||||    
T  45726486 cgcatgagccggattagtcgttcacctttggtg 45726454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 862 - 1005
Target Start/End: Complemental strand, 18649496 - 18649353
Alignment:
Q  862 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagc 961  Q
    ||||| || |||||||| ||||||||||||  |   ||||||| |||| ||| ||||| |||||||||||||  ||||||||||  ||||| | ||||||    
T  18649496 agtggtaatgagctccttccaaggacgtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgtacgagc 18649397  T
Q  962 cggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||||| ||| ||| |||| |||   |||||||||||||||||    
T  18649396 cagattaatcgcccacctttagtggattggaaaccggtgcgaaa 18649353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 853 - 970
Target Start/End: Original strand, 6563396 - 6563513
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||| ||||||||||||||||||||| ||||||| |||  ||   || | || |||| ||||  ||| |||||||||||||| |||||| ||| ||||||    
T  6563396 ttggactccagtggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctcta 6563495  T
Q  953 tgcacgagccggattagt 970  Q
     ||||||||| |||||||    
T  6563496 cgcacgagccagattagt 6563513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 916 - 976
Target Start/End: Original strand, 10507716 - 10507776
Alignment:
Q  916 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 976  Q
    |||||||||||||| |||| ||||| ||||| ||||| ||| |||||||||||||||||||    
T  10507716 caggaggaacaacgtttggccagtgtgcatacctctacgcatgagccggattagtcgtcca 10507776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 15238259 - 15238107
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||| ||||||||||||||| |||||||||||     | ||||||| |||| |||| |||| ||| |||||||||| || || ||||  |||||    
T  15238259 ttgggctccaatggcaaggagctccttccaaggacgtacctagggaatatcgggttcgattcccagggggagcaacgcttggccaatgagcatgcctcta 15238160  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||||||  |  ||||||||  || |||||||| | ||||||||||| |||||    
T  15238159 cgcacgaatcatattagtcgctcacctttggtgggttggaaaccggttcgaaa 15238107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 906 - 1005
Target Start/End: Original strand, 44969673 - 44969771
Alignment:
Q  906 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaa 1004  Q
    |||| ||||||||||| |||||||||||| ||||| ||||  | ||| ||| ||||||||||||||||||||| |||||| ||| ||||||||||| |||    
T  44969673 gttcgattctcaggag-aacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtg-gatcggaaaccggtgtgaa 44969770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 862 - 945
Target Start/End: Complemental strand, 34334439 - 34334356
Alignment:
Q  862 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    ||||||||||||||| | |||||||||||| || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||    
T  34334439 agtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcat 34334356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 852 - 967
Target Start/End: Original strand, 34877944 - 34878059
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||| |||||||||||||| ||| |||||||||||| || | |||| |  |||| ||||  ||| |||||||| ||||| ||||||||||  ||||    
T  34877944 tttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccaggttcgattcctaggcggaacaacacttggccagtgcgcatgcctct 34878043  T
Q  952 atgcacgagccggatt 967  Q
    |  |||||||| ||||    
T  34878044 acacacgagccagatt 34878059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 916 - 1005
Target Start/End: Original strand, 16263563 - 16263652
Alignment:
Q  916 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    ||||||||||||||||||| ||||||||||  ||||| |||  ||||||| ||||||||||  |||| || ||| ||||||||||||||||    
T  16263563 caggaggaacaacgcttggccagtgcgcatgcctctacgcataagccggaatagtcgtccacttttgatg-gatcggaaaccggtgcgaaa 16263652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 863 - 1005
Target Start/End: Original strand, 34697300 - 34697442
Alignment:
Q  863 gtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagcc 962  Q
    |||||||||||||||| ||||  |||||| || | |||| |  |||| ||||| ||| |||||||| |||||  |||| ||||  ||||| ||| |||||    
T  34697300 gtggcaaggagctccttccaaaaacgtattcggggaataccaggttcgattcttagggggaacaacacttggctagtgtgcatgcctctacgcatgagcc 34697399  T
Q  963 ggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||| |||  |||| || | ||||||||| |||||||    
T  34697400 ggattagtcgcccacttttgatgggttggaaaccgatgcgaaa 34697442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 919 - 984
Target Start/End: Original strand, 48761197 - 48761262
Alignment:
Q  919 gaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggt 984  Q
    ||||||||||| ||||||||||  |||  ||||| |||||||| |||||||||||||| |||||||    
T  48761197 gaggaacaacgtttggtcagtggacatgcctctacgcacgagctggattagtcgtccacctttggt 48761262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 852 - 945
Target Start/End: Original strand, 51437423 - 51437516
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    |||||||| ||||| ||| ||||||||  ||||||||||| || | ||||||| |||| |||| || | |||||||||||||  ||||||||||    
T  51437423 tttgggcttcagtgacaatgagctcctttcaaggacgtatccgaggaatatcgggttcgattcccatggggaacaacgcttgaccagtgcgcat 51437516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 853 - 985
Target Start/End: Complemental strand, 9853430 - 9853298
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| ||||||| |||  ||  ||||| || |||| ||||  ||| | ||||||| ||   ||||||||||  |||||    
T  9853430 ttgggctccagtggcaaggagctccttccaaggatgtacccggaaaataccgggttcgattcctaggggaaacaacgttttaccagtgcgcatgcctcta 9853331  T
Q  953 tgcacgagccggattagtcgtccatctttggtg 985  Q
      ||||| || ||||| ||||||| ||||||||    
T  9853330 cacacgaaccagattaatcgtccacctttggtg 9853298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 26660093 - 26660244
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||| ||| | || | || ||||||| || | |||| || |||| |||  || | ||||||||  ||| ||||| |||||  |||||    
T  26660093 ttgggctccagtggcaaagagtttcttcgaatgacgtattcggggaataccgggttcgatttccacggggaacaacatttgatcagtacgcatgcctcta 26660192  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| ||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  26660193 cgcatgagccggattagtcg-ccacctttggtgggtcggaaaccggtgcgaaa 26660244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 923 - 978
Target Start/End: Complemental strand, 17988743 - 17988688
Alignment:
Q  923 aacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatc 978  Q
    ||||| |||||| ||||||||||| ||||| ||| || ||||||||||||||||||    
T  17988743 aacaatgcttggccagtgcgcatacctctacgcatgaaccggattagtcgtccatc 17988688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 921 - 972
Target Start/End: Complemental strand, 21849290 - 21849239
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 972  Q
    ||||||||||||||  |||||||||  ||||| |||||||||||||||||||    
T  21849290 ggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcg 21849239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 922 - 976
Target Start/End: Original strand, 13262107 - 13262161
Alignment:
Q  922 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 976  Q
    |||||||| ||||||| | ||||| |||||| ||||||| |||||||||||||||    
T  13262107 gaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcgtcca 13262161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 852 - 1018
Target Start/End: Complemental strand, 32142999 - 32142834
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| || ||||||||| |||||| | |||||||||||  | || |||| || |||| ||| ||||| |||||||| ||||| ||||||||||  || |    
T  32142999 tttggacttcagtggcaaagagctcattccaaggacgta-ccctggaataccgggttcgattttcagggggaacaacacttggccagtgcgcatgccttt 32142901  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    | ||| |||||| ||||||||  || ||||| || |  |||||||| ||||||| ||| | ||||||    
T  32142900 acgcatgagccgaattagtcgctcacctttgatgggtcggaaaccgatgcgaaagcaaaaaaaaaaa 32142834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 853 - 891
Target Start/End: Original strand, 41743228 - 41743266
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtat 891  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  41743228 ttgggctccggtggcaaggagctccttccaaggacgtat 41743266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 852 - 945
Target Start/End: Complemental strand, 8905304 - 8905212
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    ||||| ||| ||||||||||||||||| |||| ||||||| ||   ||||||| || | ||| ||| | |||||||||||||| ||||||||||    
T  8905304 tttggactctagtggcaaggagctccttccaatgacgtatccggagaatatcgggtacgatt-tcaaggggaacaacgcttggccagtgcgcat 8905212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 868 - 1001
Target Start/End: Original strand, 26258666 - 26258798
Alignment:
Q  868 aaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggatt 967  Q
    ||||||||||| |||| ||||||  || | |||| ||  ||| |||||||||| || ||||||||||||||||| |||  || || ||| ||| ||||||    
T  26258666 aaggagctccttccaaagacgtacccggggaataccggattcgattctcaggaaga-caacgcttggtcagtgcacatgcctttacgcatgagtcggatt 26258764  T
Q  968 agtcgtccatctttggtgtgatggaaaccggtgc 1001  Q
    | ||||||| |||| ||| | ||||||| |||||    
T  26258765 aatcgtccacctttagtgggttggaaactggtgc 26258798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 898 - 971
Target Start/End: Complemental strand, 28324688 - 28324615
Alignment:
Q  898 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 971  Q
    ||||||| |||| |||| | || | |||||| ||||||||||||||||  ||||| ||| ||||||||||||||    
T  28324688 aatatcgggttcgattccccggggaaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtc 28324615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 931 - 976
Target Start/End: Original strand, 35908791 - 35908836
Alignment:
Q  931 ttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 976  Q
    |||||||||||||||  ||||| ||| |||||||||||||||||||    
T  35908791 ttggtcagtgcgcatgcctctacgcatgagccggattagtcgtcca 35908836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 70; Significance: 5e-31; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 41000 - 41153
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| ||| |||||||  |  | ||||||| |||| ||||||| | |||||||| ||||||||||| ||||  ||||    
T  41000 tttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattctcaaggggaacaacacttggtcagtgtgcatgcctct 41099  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||||||||||||||||||| |||||||||||| |  |||||||||| |||||    
T  41100 acgcacgagccggattagtcgcccatctttggtgagtcggaaaccggttcgaaa 41153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 2e-30; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 42086282 - 42086434
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||| |||||||||||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||||||||  ||||||||||  |||||    
T  42086282 ttgggctccggtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctcta 42086381  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| ||||||||||||||||||| |||||||| |  ||||||||||||||||    
T  42086382 cgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 42086434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 1538385 - 1538538
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| || ||||||||| || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  ||||    
T  1538385 tttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctct 1538484  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||||||||||| ||||||| | |||||| |  ||||||||||||||||    
T  1538485 acgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaa 1538538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 5732072 - 5731920
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||  || | |||| || |||| |||| ||||||||||||||||||| ||||||||||  |||||    
T  5732072 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctcta 5731973  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     | | ||||| |||||||||| || |||| ||| |  ||||||||||||||||    
T  5731972 cgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcgaaa 5731920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 19572679 - 19572831
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||| || |||  |||| |||| |||||||| ||||| ||||||||||  |||||    
T  19572679 ttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctcta 19572778  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||| |||||||||||||||| || | |||||| | |||||||| ||||||||    
T  19572779 cgcatgagccggattagtcgttcaccattggtgggttggaaaccagtgcgaaa 19572831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 849 - 971
Target Start/End: Complemental strand, 25417339 - 25417217
Alignment:
Q  849 gtttttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatc 948  Q
    |||||||||||||||||||||||||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||||||||| ||||||||||  |    
T  25417339 gtttttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcc 25417240  T
Q  949 tctatgcacgagccggattagtc 971  Q
    |||| | ||||||||||||||||    
T  25417239 tctacgaacgagccggattagtc 25417217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 853 - 1018
Target Start/End: Original strand, 7866536 - 7866701
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||| ||||||||||||||||||||| |||||||||||  || | |||| || |||| ||||  |||||||||||||||||| ||||| ||||  |||||    
T  7866536 ttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctcta 7866635  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
     |||||| |||||||||||| ||| |||||||| | | |||||| |||||||| ||| | ||||||    
T  7866636 cgcacgaaccggattagtcgcccacctttggtgggttagaaaccagtgcgaaagcaaaaaaaaaaa 7866701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 20525793 - 20525945
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||||||||||||  |||||| |||| || | ||||||| |||| |||| |||| |||||||| ||| | ||||||||||  |||||    
T  20525793 ttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctcta 20525892  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
     ||| ||||||||||||||||||| | |||||| ||| ||||||||||||||||    
T  20525893 cgcatgagccggattagtcgtccaccattggtg-gatcggaaaccggtgcgaaa 20525945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 37263196 - 37263347
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||||||||||||||| |||| | |||||||||  || | ||||||| |||| ||||||||| |||||||||||||| || |||||||  |||||    
T  37263196 ttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattctcagg-ggaacaacgcttggccaatgcgcatgcctcta 37263294  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
     ||||||||||||||||||||||| ||||  || ||| ||||||||||||||||    
T  37263295 cgcacgagccggattagtcgtccacctttattg-gatcggaaaccggtgcgaaa 37263347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 861 - 1005
Target Start/End: Complemental strand, 14588761 - 14588617
Alignment:
Q  861 cagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgag 960  Q
    ||||||||||||||| ||  |||||||||||  | | ||||||| |||| ||| |||||||||| ||||||||  ||||||||||  ||||| ||| |||    
T  14588761 cagtggcaaggagcttctttcaaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgag 14588662  T
Q  961 ccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||||||||||||| |||||||| |  | ||||||||||||||    
T  14588661 ccggattagtcgtccacctttggtgagccgaaaaccggtgcgaaa 14588617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 852 - 959
Target Start/End: Complemental strand, 35403665 - 35403558
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||||||||||  || |||||| || |||| ||||| ||| |||||||||||||| || ||||||| |||||    
T  35403665 tttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggttcgattctaagggggaacaacgcttggccaatgcgcatgtctct 35403566  T
Q  952 atgcacga 959  Q
    | ||||||    
T  35403565 acgcacga 35403558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 9812826 - 9812979
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||||||||||||||||||||| |||||||||||  || | |||| || |||| ||||  |||||||||||||||||| ||||| ||||   |||    
T  9812826 tttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttct 9812925  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| || |||||||||||| ||| |||||||| |   |||||||||||||||    
T  9812926 acgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaa 9812979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 41163612 - 41163460
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| ||||| |||||  || | |||| || |||| |||| |||| ||||||||| |||| |||||| ||| |||||    
T  41163612 tttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcgattcccagg-ggaacaacgtttggccagtgcacatgtctct 41163514  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| |||| |||||||||||||| |||| ||| |  |||||| |||||||||    
T  41163513 acgcatgagctggattagtcgtccaccttttgtgggtcggaaactggtgcgaaa 41163460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 8513474 - 8513626
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||| ||| ||||||||||||||||| |||||||||||  || | |||| || |||| ||||  ||| | ||||| |||||| |||||| |||  |||||    
T  8513474 ttggactcaagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtgcacatgcctcta 8513573  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||||||||| ||||||||||||| |||||||| |  ||||||||||||||||    
T  8513574 cgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 8513626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 12704968 - 12705121
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||||||||||||||||||||| |||||||||||  || | |||| || |||| ||||  |||||||||||||||||  ||||| ||||   |||    
T  12704968 tttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttct 12705067  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| || |||||||||||| ||| |||||||| |   |||||||||||||||    
T  12705068 acgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaa 12705121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 12766085 - 12766238
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| ||| ||||||||||||||||| |||||||||||  || | |||| || |||| ||||| ||||||||||| |||||| ||||| ||||  ||||    
T  12766085 tttggactcgagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattctgaggaggaacaatgcttggccagtgtgcatgcctct 12766184  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| || || ||||||||| ||| |||||||| |   |||||||||||||||    
T  12766185 acgcatgaaccagattagtcgcccacctttggtgggtcagaaaccggtgcgaaa 12766238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 20682770 - 20682617
Alignment:
Q  853 ttgggctccagtggcaaggagctcc-taccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||| ||||||||||| | | |||||||||  || | ||||| | |||  |||  |||| |||||||||||||| ||||||||||  ||||    
T  20682770 ttgggctccagtgacaaggagctccattctaaggacgtacccggggaatattgggttagatttccagggggaacaacgcttggccagtgcgcatgcctct 20682671  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||||||||||||||| ||| ||| |||| ||| | |||||||||||||||||    
T  20682670 acgcacgagccggattaatcgaccacctttagtgggttggaaaccggtgcgaaa 20682617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 30349533 - 30349686
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||||||||||||||||||| |||| |||||||||||| || | |||| || |||  |||   ||| ||||||| | |||| ||||||||||  ||||    
T  30349533 tttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgcgcatgcctct 30349632  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||| |||| | |||||||||||| ||| |||| |  ||||||||||||||||    
T  30349633 atgcatgagctgaattagtcgtccaccttaggtgggccggaaaccggtgcgaaa 30349686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 854 - 970
Target Start/End: Complemental strand, 4016406 - 4016290
Alignment:
Q  854 tgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctat 953  Q
    ||||||||||||||||| ||||| | |||||||||||   | ||||||||| |||| ||| ||||| |||||||| ||||| ||||||||||  |||||     
T  4016406 tgggctccagtggcaagaagctcattccaaggacgtacctgagaaatatcgggttcgattatcagggggaacaacacttggccagtgcgcatgcctctac 4016307  T
Q  954 gcacgagccggattagt 970  Q
     ||||||||||||||||    
T  4016306 acacgagccggattagt 4016290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 852 - 972
Target Start/End: Complemental strand, 7308517 - 7308397
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||| || ||||||||||||||| | ||||||||||||  | | ||||||| |||| |||| |||| |||||||||||||| |||||| |||  ||||    
T  7308517 tttgggttctagtggcaaggagctcattccaaggacgtatttgaggaatatcgggttcgattcccagggggaacaacgcttgggcagtgcacatgcctct 7308418  T
Q  952 atgcacgagccggattagtcg 972  Q
    | ||| |||||||||||||||    
T  7308417 acgcatgagccggattagtcg 7308397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 857 - 981
Target Start/End: Complemental strand, 9168399 - 9168277
Alignment:
Q  857 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 956  Q
    |||||||||||||||| ||||| |||| ||||||| || | |||| ||||  | |||| ||| ||||||||||||||| ||||||||||| ||||| |||    
T  9168399 gctccagtggcaagga-ctccttccaaagacgtatccggggaataccgagaacgattcccag-aggaacaacgcttggccagtgcgcatacctctacgca 9168302  T
Q  957 cgagccggattagtcgtccatcttt 981  Q
     ||||||||||||||||||| ||||    
T  9168301 tgagccggattagtcgtccaccttt 9168277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 906 - 1005
Target Start/End: Original strand, 9805012 - 9805111
Alignment:
Q  906 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| |||| |||| |||||||||||||| ||||||||||  ||||| ||| ||||||||||||||||||| |||||||| |  |||||| |||||||||    
T  9805012 gttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaacaggtgcgaaa 9805111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 852 - 982
Target Start/End: Complemental strand, 23247504 - 23247374
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||| || |||| ||||||||||| | |||||||||||   | | ||||||| |||| |||| |||||||||||||||||| |||||  ||||  ||||    
T  23247504 tttggacttcagtagcaaggagctcattccaaggacgtacctggggaatatcgggttcgattcccaggaggaacaacgcttgatcagtatgcatgcctct 23247405  T
Q  952 atgcacgagccggattagtcgtccatctttg 982  Q
    | ||||||||| ||||||||||||| |||||    
T  23247404 acgcacgagccagattagtcgtccacctttg 23247374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 42861371 - 42861218
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctatt-ctcaggaggaacaacgcttggtcagtgcgcatatctc 950  Q
    ||||||||||||||||||||||||| | |||||||| ||| || | ||||||| |||| ||| | |||| | |||||| ||||| ||||||||||  |||    
T  42861371 tttgggctccagtggcaaggagctcattccaaggacatatccggggaatatcgggttcaatttcccagg-gaaacaacacttggccagtgcgcatgcctc 42861273  T
Q  951 tatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    || ||| ||||||||||| ||||||| | |||||| |  ||| ||||||||||||    
T  42861272 tacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaa 42861218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 23383602 - 23383764
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatg---cgt------gaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcg 942  Q
    ||||||||||||||||||||||||||| ||||||||||||    |||      | |||| || |||| |||| |||| |||||||||||||| |||||||    
T  23383602 tttgggctccagtggcaaggagctccttccaaggacgtatcagacgtatcagaggaataccgggttcgattcccagggggaacaacgcttggccagtgcg 23383701  T
Q  943 catatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | |  ||||| ||| |||| |||||||||||||| |||||||| |  |||||| |||||||||    
T  23383702 cttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 23383764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 862 - 1018
Target Start/End: Complemental strand, 11845944 - 11845788
Alignment:
Q  862 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagc 961  Q
    ||||||||||||||||| |||||||||||  || ||||||||| |||| |||   ||| ||||||||| |||| ||||||||||  ||||| | | ||||    
T  11845944 agtggcaaggagctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatgagc 11845845  T
Q  962 cggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    || |||| ||| ||| ||||| || | |||||||||||| ||||  |||| ||||||    
T  11845844 cgaattaatcgcccacctttgatgggttggaaaccggtgtgaaagaaagaaaaaaaa 11845788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 906 - 1018
Target Start/End: Original strand, 12081916 - 12082028
Alignment:
Q  906 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| ||||||||| |||||||||||||| ||||||||||   |||| |||||||||| |||||||||||| |||||||| |  ||||| ||||| ||||    
T  12081916 gttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccacctttggtgagtcggaaatcggtgtgaaa 12082015  T
Q  1006 ccaagataaaaaa 1018  Q
     ||| | ||||||    
T  12082016 gcaaaaaaaaaaa 12082028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 852 - 968
Target Start/End: Complemental strand, 18136433 - 18136317
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||||||||||||||||||||| |||| ||||||| ||   |||| || |||| |||| |||| |||||||| ||||||||||| ||||  ||||    
T  18136433 tttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtgtgcatgcctct 18136334  T
Q  952 atgcacgagccggatta 968  Q
    |  || |||||||||||    
T  18136333 acacatgagccggatta 18136317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 898 - 982
Target Start/End: Original strand, 41800977 - 41801061
Alignment:
Q  898 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttg 982  Q
    ||||||| |||| ||||||| | |||||||||||||  || ||||||| |||||| |||||||||||||||||||| ||||||||    
T  41800977 aatatcgggttcgattctcaaggggaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcgttcatctttg 41801061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 853 - 964
Target Start/End: Original strand, 28857083 - 28857194
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||||||||||||||||| ||||||||| |  || | |||| || |||| |||| |||| |||||||| ||||| ||||||||||  |||||    
T  28857083 ttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctcta 28857182  T
Q  953 tgcacgagccgg 964  Q
     ||| |||||||    
T  28857183 cgcatgagccgg 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 862 - 985
Target Start/End: Original strand, 30995085 - 30995208
Alignment:
Q  862 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagc 961  Q
    ||||||||||||||||| |||||||||||   | | |||| |  |||| |||| |||| |||||||| ||||| ||| ||||||  ||||| ||||||||    
T  30995085 agtggcaaggagctccttccaaggacgtacatggggaataccaggttcgattcccagggggaacaacacttggccagggcgcatgcctctacgcacgagc 30995184  T
Q  962 cggattagtcgtccatctttggtg 985  Q
    |||||||||||  |||||||||||    
T  30995185 cggattagtcgctcatctttggtg 30995208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 863 - 1005
Target Start/End: Original strand, 13664225 - 13664367
Alignment:
Q  863 gtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagcc 962  Q
    |||||||||||||||| ||||||||||||    | |||| ||  ||| ||| ||||| |||||||| ||||| ||||||||||  ||||| ||| |||||    
T  13664225 gtggcaaggagctccttccaaggacgtatctagggaataccggattcgattatcagggggaacaacacttggccagtgcgcatgcctctacgcatgagcc 13664324  T
Q  963 ggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     ||||| |||  || ||||||||||  ||||||||||||||||    
T  13664325 agattaatcgatcacctttggtgtgtcggaaaccggtgcgaaa 13664367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 857 - 959
Target Start/End: Original strand, 28862784 - 28862886
Alignment:
Q  857 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 956  Q
    |||||||||||||||||||||| |||| ||||||| || | ||||||  |||| ||||||||| |||||||||||||| || ||| |||  ||||| |||    
T  28862784 gctccagtggcaaggagctccttccaaagacgtattcggggaatatcaggttcgattctcaggcggaacaacgcttggccaatgcacatgcctctacgca 28862883  T
Q  957 cga 959  Q
    |||    
T  28862884 cga 28862886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 852 - 945
Target Start/End: Original strand, 1898955 - 1899048
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    |||||||| |||||||||||||||||| ||||||| |||  || | |||| || |||| |||| |||| |||||||||||||| ||||||||||    
T  1898955 tttgggctacagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcat 1899048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 852 - 985
Target Start/End: Original strand, 5079285 - 5079418
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    |||||| ||| ||||||| |||||||| ||||| |||||| |||| |||| || | |  |||  |||| |||||| |||||||||| |||||||   |||    
T  5079285 tttgggttccggtggcaaagagctccttccaagcacgtatccgtggaataccggggttgatttccagggggaacagcgcttggtcaatgcgcatgcttct 5079384  T
Q  952 atgcacgagccggattagtcgtccatctttggtg 985  Q
    | ||||||||||||||||||| ||| ||||||||    
T  5079385 acgcacgagccggattagtcgcccacctttggtg 5079418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 867 - 976
Target Start/End: Complemental strand, 35638171 - 35638062
Alignment:
Q  867 caaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggat 966  Q
    |||||| ||||| ||| ||||||||  | | ||||| || ||| ||| ||||||||||||||| |||||||||| ||||| ||||| ||||||| | |||    
T  35638171 caaggaactccttccagggacgtatttggggaatattgaattcgattttcaggaggaacaacgtttggtcagtgtgcatacctctacgcacgagtcagat 35638072  T
Q  967 tagtcgtcca 976  Q
    ||||||||||    
T  35638071 tagtcgtcca 35638062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 862 - 1005
Target Start/End: Complemental strand, 38897861 - 38897719
Alignment:
Q  862 agtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagc 961  Q
    ||||||||||||||| |  |||||||||||  | | |||| || |||| |||  |||| |||||||||||||| ||||||||||  ||||| ||||||||    
T  38897861 agtggcaaggagctctttacaaggacgtatatggggaataccgggttcgatttccagg-ggaacaacgcttggccagtgcgcatgcctctacgcacgagc 38897763  T
Q  962 cggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    ||||||||| | ||| |||||||| ||| ||||||| ||||||||    
T  38897762 cggattagttgcccacctttggtg-gatcggaaaccagtgcgaaa 38897719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 922 - 1005
Target Start/End: Complemental strand, 42291588 - 42291505
Alignment:
Q  922 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    ||||||||||||| |||||| |||  ||||| ||||||||||||||||||||||| ||||| || ||| ||||||||||||||||    
T  42291588 gaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgatg-gatcggaaaccggtgcgaaa 42291505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 24498937 - 24499089
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctatt-ctcaggaggaacaacgcttggtcagtgcgcatatctc 950  Q
    ||||||||| ||| ||||||||||||| ||||||||||||  |   ||||||| |||| ||| || || |  || |||||||| |||||||||||  |||    
T  24498937 tttgggctctagtagcaaggagctccttccaaggacgtatctggagaatatcgggttcgatttctaagaa--aataacgcttgatcagtgcgcatgcctc 24499034  T
Q  951 tatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    || | ||||||||||||| | |||||||||||||| | ||||||  |||||||||    
T  24499035 tacgtacgagccggattaatagtccatctttggtgggttggaaattggtgcgaaa 24499089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 906 - 972
Target Start/End: Complemental strand, 18262717 - 18262651
Alignment:
Q  906 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 972  Q
    |||||||| ||||| |||||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  18262717 gttctattttcagggggaacaacgcttgaccagtgcgcatacctctacacacgagccggattagtcg 18262651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 885 - 1018
Target Start/End: Original strand, 40117402 - 40117535
Alignment:
Q  885 gacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggt 984  Q
    ||||||| || | |||||||| ||| |||  |||| |||||||||||||| ||||||||||  ||||| ||| ||||||||||| |||| || |||||||    
T  40117402 gacgtattcggggaatatcgaattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggt 40117501  T
Q  985 gtgat-ggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    | ||| | |||||||||||||| ||| | ||||||    
T  40117502 g-gatcgaaaaccggtgcgaaagcaataaaaaaaa 40117535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 915 - 1005
Target Start/End: Original strand, 43399145 - 43399235
Alignment:
Q  915 tcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||| |||| ||||||||| ||||||||||  ||||| |||||||| ||||||||||||||  ||||||  |  ||||||||||||||||    
T  43399145 tcagggggaataacgcttggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaaa 43399235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 864 - 985
Target Start/End: Complemental strand, 14974465 - 14974344
Alignment:
Q  864 tggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccg 963  Q
    ||||||||||||| | | |||||||||| ||   ||||||| |||| ||||| | | ||||||||  |||| |||||| |||  ||||| ||| ||||||    
T  14974465 tggcaaggagctcattctaaggacgtatccggagaatatcgggttcgattctaaaggggaacaacatttggccagtgcacatgcctctacgcatgagccg 14974366  T
Q  964 gattagtcgtccatctttggtg 985  Q
    ||||||||||||| ||||||||    
T  14974365 gattagtcgtccacctttggtg 14974344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 882 - 1005
Target Start/End: Original strand, 7336604 - 7336726
Alignment:
Q  882 aaggacgtatgcgtgaaatatcgagttctatt-ctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 980  Q
    |||||||||| || | ||||||| |||| ||| || ||||| ||||||||||  |||||||||||  ||||| ||||||||||||||| ||||| | |||    
T  7336604 aaggacgtatccgaggaatatcgggttcgatttctaaggag-aacaacgctttatcagtgcgcatgcctctacgcacgagccggattaatcgtctacctt 7336702  T
Q  981 tggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||| |||  ||||||||||||||    
T  7336703 tggtg-gataaaaaccggtgcgaaa 7336726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 921 - 985
Target Start/End: Complemental strand, 18294568 - 18294504
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 985  Q
    |||||||||||||||||||||||||| |||||  || || |||||||| ||| ||||||||||||    
T  18294568 ggaacaacgcttggtcagtgcgcatacctctacacatgaaccggattaatcgcccatctttggtg 18294504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 922 - 985
Target Start/End: Complemental strand, 3653997 - 3653934
Alignment:
Q  922 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtg 985  Q
    ||||||||||||  ||||||||||  ||||| ||||||| ||||||||||||||| ||||||||    
T  3653997 gaacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtcgtccacctttggtg 3653934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 914 - 1005
Target Start/End: Original strand, 20255385 - 20255476
Alignment:
Q  914 ctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||| ||||||| ||||  ||||||||||  ||||| ||| ||| ||||||||||||||| |||||||| |  |||||| |||||||||    
T  20255385 ctcaggacgaacaacacttgaccagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggtgagtcggaaactggtgcgaaa 20255476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 868 - 981
Target Start/End: Original strand, 21487587 - 21487697
Alignment:
Q  868 aaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggatt 967  Q
    ||||||||||| |||| || |||  || | |||||||||||| ||| ||||||||||||||| ||||  |||||||||  ||||   |||||||||||||    
T  21487587 aaggagctccttccaatgatgtactcgaggaatatcgagttcgattttcaggaggaacaacgtttggctagtgcgcatgcctct---cacgagccggatt 21487683  T
Q  968 agtcgtccatcttt 981  Q
    ||||| ||| ||||    
T  21487684 agtcgcccaccttt 21487697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 922 - 981
Target Start/End: Complemental strand, 24463969 - 24463910
Alignment:
Q  922 gaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatcttt 981  Q
    |||||||| |||| ||||||||||  ||||||||||||||||||||||||| ||| ||||    
T  24463969 gaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccaccttt 24463910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 898 - 952
Target Start/End: Original strand, 7736871 - 7736925
Alignment:
Q  898 aatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||||||| ||||||||||  ||||||| ||||||||||| ||||||||||    
T  7736871 aatatcgagttcgattctcaggacaaacaacgtttggtcagtgcacatatctcta 7736925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 14728036 - 14728190
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggagga-acaacgcttggtcagtgcgcatatctc 950  Q
    |||||||||||||||||| |||||| | |||||| | | |  | |||||| ||  ||| ||| ||||| ||  ||||||||||||||||||||||  |||    
T  14728036 tttgggctccagtggcaatgagctcattccaaggtcatttttgggaaataccggattcgattttcagggggggacaacgcttggtcagtgcgcatgcctc 14728135  T
Q  951 tatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    || ||| ||||||||||||| |  || ||||| || |  ||||||||||||||||    
T  14728136 tacgcatgagccggattagttgctcacctttgatgggtcggaaaccggtgcgaaa 14728190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 853 - 890
Target Start/End: Complemental strand, 6767203 - 6767166
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgta 890  Q
    |||||||||||||||||||||||||| |||||||||||    
T  6767203 ttgggctccagtggcaaggagctccttccaaggacgta 6767166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 850 - 891
Target Start/End: Original strand, 18327722 - 18327763
Alignment:
Q  850 tttttgggctccagtggcaaggagctcctaccaaggacgtat 891  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  18327722 tttttggactccagtggcaaggagctccttccaaggacgtat 18327763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 881 - 1018
Target Start/End: Complemental strand, 24653935 - 24653799
Alignment:
Q  881 caaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctt 980  Q
    ||||||||||| || | ||||| | |||| ||| |||||  ||||||| ||||||||||||||||| ||||| |||  |||||||||| ||||||| | |    
T  24653935 caaggacgtatccggggaatatagggttcgattttcagggagaacaacacttggtcagtgcgcatacctctacgca-tagccggattaatcgtccaccat 24653837  T
Q  981 tggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
    ||||| |  | |||||| ||||||| ||| | ||||||    
T  24653836 tggtgggtcgaaaaccgatgcgaaagcaaaaaaaaaaa 24653799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 853 - 982
Target Start/End: Original strand, 24875300 - 24875429
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||| || |||||||||||  | |||||||||||  |    ||||||  |||| ||||| |||  |||||||| |||  |||||||||| ||||||    
T  24875300 ttgggctctagcggcaaggagcttattccaaggacgtacccaaagaatatcaggttcgattcttagggagaacaacgtttgaccagtgcgcatgtctcta 24875399  T
Q  953 tgcacgagccggattagtcgtccatctttg 982  Q
     ||||||||||||||| ||||||| |||||    
T  24875400 cgcacgagccggattaatcgtccacctttg 24875429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 852 - 945
Target Start/End: Complemental strand, 38297117 - 38297024
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    ||||||||||||||||||||||||||| | ||||| |||   | | |||| || |||| |||| || | ||||||||| |||||||||||||||    
T  38297117 tttgggctccagtggcaaggagctccttctaaggatgtacttgaggaataccgggttcaattcccaaggggaacaacgtttggtcagtgcgcat 38297024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 916 - 1001
Target Start/End: Complemental strand, 39099868 - 39099783
Alignment:
Q  916 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgc 1001  Q
    |||| |||||||| ||||| |||||| |||  ||||| ||| ||||||||||||||| ||| |||||||| |  ||||||||||||    
T  39099868 cagggggaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 39099783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 856 - 976
Target Start/End: Original strand, 14152008 - 14152128
Alignment:
Q  856 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 955  Q
    ||||||||||||||||||||||| |||| || |||   | | |||| || |||| |||||||   |||||||||||||| ||||| ||||   ||||| |    
T  14152008 ggctccagtggcaaggagctccttccaatgatgtacctggggaataccgggttcgattctcatagggaacaacgcttggccagtgtgcatgcttctatcc 14152107  T
Q  956 acgagccggattagtcgtcca 976  Q
    | ||||||||||| |||||||    
T  14152108 atgagccggattaatcgtcca 14152128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 853 - 945
Target Start/End: Original strand, 16755016 - 16755108
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcat 945  Q
    ||||||| |||||||||||||||| | |||| ||||||| || | ||||  | |||| ||| ||||||| |||||| ||||| ||||||||||    
T  16755016 ttgggcttcagtggcaaggagctctttccaaagacgtatccggggaatactgggttcgattttcaggagaaacaacacttggccagtgcgcat 16755108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 853 - 888
Target Start/End: Original strand, 28856932 - 28856967
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacg 888  Q
    |||||||||||||||||||||||||| |||||||||    
T  28856932 ttgggctccagtggcaaggagctccttccaaggacg 28856967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 852 - 977
Target Start/End: Original strand, 1826811 - 1826937
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggagg-aacaacgcttggtcagtgcgcatatctc 950  Q
    |||||||| |||| |||| |||||||| |||| ||||||  || | ||||||  |||| |||||||||||| |||||||||||| || ||| |||  |||    
T  1826811 tttgggcttcagtagcaatgagctccttccaaagacgtactcggggaatatcaggttcgattctcaggaggaaacaacgcttggccactgcacatgcctc 1826910  T
Q  951 tatgcacgagccggattagtcgtccat 977  Q
    |  ||||||  | ||||||||||||||    
T  1826911 tgagcacgaatcagattagtcgtccat 1826937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 921 - 971
Target Start/End: Complemental strand, 35006819 - 35006769
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtc 971  Q
    |||||||||||||||||||| ||||  ||||| ||||||||| ||||||||    
T  35006819 ggaacaacgcttggtcagtgtgcatgcctctacgcacgagccagattagtc 35006769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 956 - 1005
Target Start/End: Original strand, 40773331 - 40773380
Alignment:
Q  956 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||| |||||||||||| ||||||||||| |  ||||||||||||||||    
T  40773331 acgagtcggattagtcgttcatctttggtgcgtcggaaaccggtgcgaaa 40773380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 852 - 1003
Target Start/End: Original strand, 68473 - 68621
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| ||||||||||||||||| |||||||||||  || ||||||||| |||| |||| |||| ||||||||||||||   ||||||||  ||||    
T  68473 tttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctct 68569  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcga 1003  Q
    | ||||||||||||||||||| ||| |||||||| |  | ||||||||||||    
T  68570 acgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcga 68621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 66; Significance: 1e-28; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 856 - 1005
Target Start/End: Original strand, 319382 - 319531
Alignment:
Q  856 ggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgc 955  Q
    ||||||||||||||||||||||| |||||||||||| || | |||| || |||  |||   ||| |||||||||||||| ||||||||||  ||||||||    
T  319382 ggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgc 319481  T
Q  956 acgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | |||| |||||||||||||| |||||||| |  ||||||||||||||||    
T  319482 atgagctggattagtcgtccacctttggtggggcggaaaccggtgcgaaa 319531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 853 - 1018
Target Start/End: Original strand, 527 - 692
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||||||| ||||||||||||||||| |||||||||||  || | |||| || |||| |||| |||| |||||||| |||| |||||| ||||  |||||    
T  527 ttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcgcagggggaacaacacttgatcagtgtgcatgcctcta 626  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaaccaagataaaaaa 1018  Q
     | | ||||| |||||||||  || |||||||| |  |||||||||||||||| ||| | ||||||    
T  627 cgtatgagccagattagtcgctcacctttggtgggtcggaaaccggtgcgaaagcaaaaaaaaaaa 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 853 - 940
Target Start/End: Complemental strand, 412178 - 412091
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtg 940  Q
    ||||||| ||||||| | |||||||| |||||||||||| || | |||| ||||||| |||| |||| ||||||||||||||||||||    
T  412178 ttgggcttcagtggcgatgagctccttccaaggacgtatccggggaataccgagttcgattcacagggggaacaacgcttggtcagtg 412091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 60; Significance: 5e-25; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 853 - 972
Target Start/End: Complemental strand, 271226 - 271107
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||  |||||||||||||||| |||||||||||  ||   ||||||| |||| |||| |||| ||||||||||||||||||||||||| ||||||    
T  271226 ttgggctctggtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacgcttggtcagtgcgcatgtctcta 271127  T
Q  953 tgcacgagccggattagtcg 972  Q
     ||||||||||| |||||||    
T  271126 cgcacgagccgggttagtcg 271107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 853 - 890
Target Start/End: Complemental strand, 250165 - 250128
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgta 890  Q
    |||||||||||||||||||||||| | |||||||||||    
T  250165 ttgggctccagtggcaaggagctcattccaaggacgta 250128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 3e-23; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 857 - 1005
Target Start/End: Original strand, 224278 - 224426
Alignment:
Q  857 gctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgca 956  Q
    |||| |||||||||||||  || | |||||||||| ||   ||||||| |||| | |||||||  ||| |||| ||| ||||||| |||| ||||| |||    
T  224278 gctctagtggcaaggagcatcttctaaggacgtattcggagaatatcgggttcgaatctcagggagaataacgtttgatcagtgcacatacctctacgca 224377  T
Q  957 cgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  224378 cgagccggattagtcgtccatctttggtgggtcggaaaccggtgcgaaa 224426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 931 - 1005
Target Start/End: Original strand, 186552 - 186626
Alignment:
Q  931 ttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    ||||||||||| |||  ||||| |||||||||||||||||||| ||||||| ||| |  ||||||||||| ||||    
T  186552 ttggtcagtgcacatgcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccggtgtgaaa 186626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 52; Significance: 3e-20; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 858 - 985
Target Start/End: Original strand, 9807 - 9934
Alignment:
Q  858 ctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcac 957  Q
    |||||||| |||||||||||| ||||||| ||||  | | |||| ||  ||| |||  |||| |||||||||||||| ||||||||||  ||||| ||||    
T  9807 ctccagtgacaaggagctccttccaaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcac 9906  T
Q  958 gagccggattagtcgtccatctttggtg 985  Q
    ||||||||||||||||||| ||||||||    
T  9907 gagccggattagtcgtccacctttggtg 9934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 50; Significance: 5e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 868 - 1005
Target Start/End: Original strand, 16851 - 16988
Alignment:
Q  868 aaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggatt 967  Q
    ||||||||||| ||||||| | || |  | ||||| | |||| ||||||||| | |||||||||||||||||||| || |||||| ||||||||| ||||    
T  16851 aaggagctccttccaaggatgcattcagggaatattgggttcaattctcaggggaaacaacgcttggtcagtgcgtatgtctctacgcacgagccagatt 16950  T
Q  968 agtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||||  || |||||||| | ||||||||| |||||||    
T  16951 agtcgctcacctttggtgggttggaaaccgatgcgaaa 16988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 852 - 1005
Target Start/End: Complemental strand, 8863 - 8701
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatg---cgt------gaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcg 942  Q
    ||||||||||||||||||||||||||| ||||||||||||    |||      | |||| || |||| |||| |||| |||||||||||||| |||||||    
T  8863 tttgggctccagtggcaaggagctccttccaaggacgtatcagacgtatcagaggaataccgggttcgattcccagggggaacaacgcttggccagtgcg 8764  T
Q  943 catatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | |  ||||| ||| |||| |||||||||||||| |||||||| |  |||||| |||||||||    
T  8763 cttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 8701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 853 - 1005
Target Start/End: Original strand, 12627 - 12779
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||| ||| ||||||||| ||||||| ||||||||||   || | |||| || |||| ||||  |||||||||||||||||| ||||| ||||  |||||    
T  12627 ttggactctagtggcaagaagctccttccaaggacgtgcccggggaataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctcta 12726  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
     |||||| |||||||||||| ||| ||||| || |   |||||||||||||||    
T  12727 cgcacgaaccggattagtcgcccacctttgatgggtcagaaaccggtgcgaaa 12779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 852 - 1005
Target Start/End: Original strand, 12531 - 12682
Alignment:
Q  852 tttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctct 951  Q
    ||||||||| |||||||||||||| || |||||||||||  || |||||| || |||| ||||  ||  |||||||||||||  ||||||||||  ||||    
T  12531 tttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggttcgattcctag--ggaacaacgcttgaccagtgcgcatgcctct 12628  T
Q  952 atgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    | ||| ||| ||||||||||| ||| ||||| ||   | |||||||||||||||    
T  12629 acgcatgagtcggattagtcgcccacctttgatggattagaaaccggtgcgaaa 12682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 911 - 1005
Target Start/End: Complemental strand, 155805 - 155711
Alignment:
Q  911 attctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| |||| ||||||||||||||  |||||||||  ||||| ||||||||||||||||||| ||| |||||||| |  |||| |||||||||||    
T  155805 attcccagggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaa 155711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 906 - 1018
Target Start/End: Original strand, 6865 - 6977
Alignment:
Q  906 gttctattctcaggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
    |||| |||| |||| |||||||| ||||| ||||||||||  ||||| ||| |||||||||||||||  || |||||||| |  ||||||||||||||||    
T  6865 gttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcgaaa 6964  T
Q  1006 ccaagataaaaaa 1018  Q
     ||| | ||||||    
T  6965 gcaaaaaaaaaaa 6977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 853 - 1005
Target Start/End: Complemental strand, 42984 - 42832
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||| |||||||||||| ||||| || ||||| | |||   | | ||||||| |||| ||||  |||  |||||| |||||||||||||||||  |||||    
T  42984 ttggactccagtggcaacgagctacttccaagaatgtacctggggaatatcgggttcgattcctagggagaacaatgcttggtcagtgcgcatgcctcta 42885  T
Q  953 tgcacgagccggattagtcgtccatctttggtgtgatggaaaccggtgcgaaa 1005  Q
      || ||||||||||||||| ||| |||||||| |  ||||||||||||||||    
T  42884 cacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 42832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 853 - 970
Target Start/End: Original strand, 18589 - 18706
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    |||| ||||||||||||||||||||| ||||||| |||  ||   || | || |||| ||||  ||| |||||||||||||| |||||| ||| ||||||    
T  18589 ttggactccagtggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctcta 18688  T
Q  953 tgcacgagccggattagt 970  Q
     ||||||||| |||||||    
T  18689 cgcacgagccagattagt 18706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 853 - 981
Target Start/End: Complemental strand, 2242 - 2114
Alignment:
Q  853 ttgggctccagtggcaaggagctcctaccaaggacgtatgcgtgaaatatcgagttctattctcaggaggaacaacgcttggtcagtgcgcatatctcta 952  Q
    ||||||||| |||| ||||||| |||  ||| ||||||| || |||||| ||  ||| |||||||| |||||||||||||| | || ||||||   ||||    
T  2242 ttgggctccggtggtaaggagcacctttcaaagacgtatccgagaaataccggattcgattctcagaaggaacaacgcttgattagcgcgcatgcttcta 2143  T
Q  953 tgcacgagccggattagtcgtccatcttt 981  Q
    ||||  || ||||||||||||||| ||||    
T  2142 tgcataagtcggattagtcgtccaccttt 2114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 916 - 976
Target Start/End: Original strand, 26203 - 26263
Alignment:
Q  916 caggaggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtcca 976  Q
    |||| |||||||||||||| ||||| ||||  ||||| |||||||||||||||||||||||    
T  26203 cagggggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgtcca 26263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 921 - 972
Target Start/End: Complemental strand, 65236 - 65185
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcg 972  Q
    |||||||||||||| |||||||||| |||||| ||| |||| ||||||||||    
T  65236 ggaacaacgcttggccagtgcgcatgtctctacgcatgagctggattagtcg 65185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 921 - 1005
Target Start/End: Original strand, 19280 - 19364
Alignment:
Q  921 ggaacaacgcttggtcagtgcgcatatctctatgcacgagccggattagtcgtccatctttggtgtgat-ggaaaccggtgcgaaa 1005  Q
    ||||||||||||||  |||||||| | ||||| ||| ||||||||||||||| ||||  || ||| ||| ||||||||||||||||    
T  19280 ggaacaacgcttggctagtgcgcagacctctacgcatgagccggattagtcggccattattagtg-gatcggaaaccggtgcgaaa 19364  T

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