View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1732-Insertion-7 (Length: 813)

Name: NF1732-Insertion-7
Description: NF1732
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1732-Insertion-7
NF1732-Insertion-7
[»] chr6 (32 HSPs)
chr6 (8-581)||(23392015-23392588)
chr6 (200-518)||(17837609-17837925)
chr6 (203-518)||(29381537-29381850)
chr6 (655-811)||(23392662-23392819)
chr6 (203-416)||(5187529-5187742)
chr6 (204-409)||(23397270-23397473)
chr6 (204-513)||(18346564-18346869)
chr6 (205-409)||(29380189-29380391)
chr6 (203-318)||(17839144-17839259)
chr6 (205-342)||(6702852-6702988)
chr6 (203-318)||(2687929-2688044)
chr6 (203-381)||(32506969-32507146)
chr6 (205-342)||(6701378-6701515)
chr6 (200-318)||(5186561-5186679)
chr6 (219-318)||(2687242-2687341)
chr6 (208-343)||(29722664-29722799)
chr6 (203-295)||(12256612-12256704)
chr6 (221-416)||(7311632-7311826)
chr6 (243-391)||(12669759-12669906)
chr6 (205-335)||(232174-232303)
chr6 (204-319)||(6452515-6452630)
chr6 (224-317)||(27080941-27081034)
chr6 (233-319)||(6452310-6452396)
chr6 (363-416)||(11722941-11722994)
chr6 (233-299)||(27082168-27082234)
chr6 (204-316)||(15730036-15730149)
chr6 (242-376)||(7310311-7310443)
chr6 (204-290)||(233597-233683)
chr6 (213-270)||(12256557-12256614)
chr6 (435-514)||(232327-232406)
chr6 (203-271)||(7308499-7308567)
chr6 (352-416)||(11967360-11967424)
[»] chr7 (63 HSPs)
chr7 (205-505)||(22335977-22336274)
chr7 (204-412)||(13564150-13564358)
chr7 (204-416)||(11502328-11502541)
chr7 (200-513)||(22537552-22537861)
chr7 (205-416)||(32254987-32255199)
chr7 (200-416)||(3413525-3413740)
chr7 (655-801)||(22336398-22336547)
chr7 (205-317)||(22538854-22538966)
chr7 (207-373)||(11501180-11501344)
chr7 (242-416)||(43460730-43460904)
chr7 (204-404)||(22337292-22337489)
chr7 (203-335)||(13562818-13562950)
chr7 (200-343)||(24844254-24844397)
chr7 (233-417)||(40508404-40508587)
chr7 (233-409)||(43459481-43459655)
chr7 (205-319)||(3414838-3414952)
chr7 (233-416)||(4299956-4300138)
chr7 (233-383)||(40509675-40509824)
chr7 (233-383)||(22115105-22115254)
chr7 (529-585)||(22336274-22336330)
chr7 (205-399)||(40812539-40812731)
chr7 (200-416)||(47059101-47059319)
chr7 (205-318)||(40738843-40738957)
chr7 (351-416)||(35295842-35295907)
chr7 (284-416)||(40811397-40811529)
chr7 (242-417)||(4298748-4298922)
chr7 (203-319)||(45454034-45454150)
chr7 (221-404)||(46835689-46835872)
chr7 (316-417)||(41328328-41328428)
chr7 (353-415)||(2414890-2414952)
chr7 (221-343)||(45455352-45455474)
chr7 (243-343)||(24282955-24283055)
chr7 (323-415)||(46201248-46201338)
chr7 (201-317)||(32602927-32603043)
chr7 (208-318)||(24281075-24281186)
chr7 (242-392)||(47060408-47060556)
chr7 (358-416)||(16756021-16756079)
chr7 (201-319)||(33096863-33096981)
chr7 (316-416)||(39981426-39981525)
chr7 (223-343)||(30310137-30310258)
chr7 (363-416)||(44372884-44372937)
chr7 (363-416)||(44381740-44381793)
chr7 (233-376)||(32256344-32256485)
chr7 (219-274)||(24844399-24844454)
chr7 (203-394)||(41079766-41079954)
chr7 (362-416)||(669297-669351)
chr7 (243-328)||(30311464-30311549)
chr7 (203-271)||(38539667-38539735)
chr7 (200-272)||(41078749-41078821)
chr7 (203-318)||(6173455-6173570)
chr7 (201-264)||(22039123-22039186)
chr7 (203-302)||(33779105-33779204)
chr7 (358-417)||(43441496-43441555)
chr7 (233-317)||(11344533-11344614)
chr7 (204-317)||(47456381-47456494)
chr7 (200-272)||(35664332-35664404)
chr7 (224-275)||(534114-534165)
chr7 (224-275)||(537331-537382)
chr7 (216-271)||(25533197-25533252)
chr7 (220-271)||(30333298-30333349)
chr7 (205-271)||(30334689-30334755)
chr7 (363-416)||(4167603-4167656)
chr7 (227-316)||(5095104-5095193)
[»] chr2 (45 HSPs)
chr2 (203-416)||(29219381-29219595)
chr2 (203-416)||(29332680-29332894)
chr2 (200-416)||(18616912-18617129)
chr2 (205-513)||(1085199-1085504)
chr2 (205-416)||(17459251-17459463)
chr2 (200-374)||(1082981-1083153)
chr2 (224-409)||(43033099-43033282)
chr2 (203-318)||(6030601-6030716)
chr2 (206-317)||(34468957-34469068)
chr2 (201-318)||(18615510-18615627)
chr2 (205-318)||(29220881-29220994)
chr2 (205-318)||(29334180-29334293)
chr2 (200-316)||(44192453-44192569)
chr2 (220-394)||(11315946-11316118)
chr2 (243-414)||(11317277-11317448)
chr2 (205-318)||(44191134-44191247)
chr2 (200-409)||(32470491-32470698)
chr2 (205-318)||(6032319-6032432)
chr2 (220-416)||(11547672-11547868)
chr2 (233-417)||(32469174-32469359)
chr2 (242-416)||(6030377-6030551)
chr2 (299-416)||(42641768-42641885)
chr2 (203-385)||(12359618-12359799)
chr2 (233-394)||(43034400-43034561)
chr2 (200-319)||(249017-249136)
chr2 (205-416)||(35903506-35903715)
chr2 (444-554)||(7753297-7753408)
chr2 (243-342)||(28562790-28562889)
chr2 (202-416)||(34513461-34513674)
chr2 (358-416)||(4920966-4921024)
chr2 (232-318)||(17460689-17460775)
chr2 (351-416)||(8320900-8320965)
chr2 (233-337)||(7437747-7437851)
chr2 (218-404)||(34512825-34513008)
chr2 (363-416)||(28611161-28611213)
chr2 (351-391)||(16295150-16295190)
chr2 (204-259)||(102420-102475)
chr2 (438-512)||(102229-102303)
chr2 (208-274)||(271824-271890)
chr2 (293-343)||(7436552-7436602)
chr2 (201-271)||(34147130-34147200)
chr2 (376-413)||(16290705-16290742)
chr2 (359-404)||(30748630-30748675)
chr2 (204-257)||(35061381-35061434)
chr2 (227-316)||(40322971-40323060)
[»] chr5 (34 HSPs)
chr5 (201-415)||(30910735-30910950)
chr5 (233-513)||(30858983-30859262)
chr5 (205-403)||(30912084-30912280)
chr5 (203-416)||(33173867-33174080)
chr5 (204-416)||(22047729-22047942)
chr5 (233-416)||(39603879-39604063)
chr5 (201-416)||(22308707-22308921)
chr5 (203-416)||(1010274-1010484)
chr5 (207-416)||(8521255-8521461)
chr5 (233-417)||(27705222-27705406)
chr5 (204-416)||(325094-325304)
chr5 (324-416)||(11262509-11262601)
chr5 (444-545)||(20539122-20539227)
chr5 (323-518)||(1102735-1102926)
chr5 (200-318)||(22307501-22307619)
chr5 (293-416)||(15548323-15548451)
chr5 (232-319)||(39605473-39605560)
chr5 (233-343)||(22049116-22049226)
chr5 (355-416)||(4127161-4127222)
chr5 (318-512)||(36898791-36898985)
chr5 (351-398)||(1009328-1009375)
chr5 (204-271)||(8523798-8523865)
chr5 (205-271)||(9169584-9169650)
chr5 (202-272)||(34894144-34894214)
chr5 (202-272)||(34899002-34899072)
chr5 (351-416)||(10735906-10735971)
chr5 (428-517)||(22048943-22049032)
chr5 (258-342)||(33172604-33172689)
chr5 (368-416)||(9220365-9220413)
chr5 (203-271)||(10978331-10978399)
chr5 (480-518)||(25001811-25001849)
chr5 (219-272)||(20538065-20538118)
chr5 (227-316)||(28393251-28393340)
chr5 (242-271)||(30857835-30857864)
[»] chr1 (51 HSPs)
chr1 (201-417)||(15232746-15232962)
chr1 (222-414)||(16965035-16965228)
chr1 (200-416)||(49801610-49801826)
chr1 (200-318)||(15234046-15234164)
chr1 (204-409)||(16963831-16964034)
chr1 (202-318)||(49802900-49803016)
chr1 (233-416)||(45584915-45585099)
chr1 (204-381)||(14470853-14471029)
chr1 (242-417)||(14477698-14477872)
chr1 (351-404)||(9226135-9226188)
chr1 (249-468)||(44999318-44999535)
chr1 (323-416)||(5612993-5613083)
chr1 (200-416)||(41873879-41874094)
chr1 (316-416)||(51445699-51445798)
chr1 (205-342)||(52628854-52628991)
chr1 (203-318)||(24499660-24499775)
chr1 (204-417)||(46467143-46467354)
chr1 (232-404)||(15072710-15072881)
chr1 (204-338)||(41872573-41872707)
chr1 (351-404)||(13147336-13147389)
chr1 (242-381)||(16123322-16123460)
chr1 (324-383)||(34350228-34350288)
chr1 (205-416)||(48096940-48097149)
chr1 (317-518)||(48527645-48527842)
chr1 (220-316)||(51042350-51042445)
chr1 (203-416)||(46318526-46318737)
chr1 (323-416)||(26286529-26286619)
chr1 (358-416)||(52078052-52078110)
chr1 (363-416)||(14478421-14478474)
chr1 (201-416)||(15746675-15746888)
chr1 (204-383)||(23091348-23091527)
chr1 (358-404)||(3617417-3617463)
chr1 (243-416)||(35943354-35943527)
chr1 (347-416)||(26802079-26802148)
chr1 (232-319)||(44278353-44278440)
chr1 (351-417)||(6049332-6049398)
chr1 (362-416)||(12665944-12665998)
chr1 (358-416)||(13894763-13894821)
chr1 (200-318)||(46111493-46111611)
chr1 (351-404)||(9485224-9485277)
chr1 (347-383)||(15979031-15979067)
chr1 (349-417)||(51300167-51300235)
chr1 (204-272)||(52627512-52627580)
chr1 (204-259)||(20064173-20064228)
chr1 (204-271)||(42245939-42246006)
chr1 (293-416)||(46110368-46110489)
chr1 (370-416)||(27556431-27556476)
chr1 (205-271)||(42244629-42244695)
chr1 (359-416)||(18821647-18821704)
chr1 (242-271)||(34352008-34352037)
chr1 (351-416)||(46111404-46111469)
[»] chr8 (64 HSPs)
chr8 (202-416)||(42098558-42098772)
chr8 (204-416)||(13117540-13117752)
chr8 (204-342)||(17339530-17339668)
chr8 (203-513)||(32695088-32695395)
chr8 (203-343)||(13116326-13116466)
chr8 (200-416)||(32798439-32798655)
chr8 (204-317)||(17338038-17338151)
chr8 (202-409)||(42100022-42100227)
chr8 (233-416)||(6397809-6397990)
chr8 (233-416)||(42870839-42871023)
chr8 (243-416)||(44076269-44076443)
chr8 (206-318)||(211594-211706)
chr8 (206-318)||(240550-240662)
chr8 (206-318)||(725217-725329)
chr8 (206-318)||(793905-794017)
chr8 (233-416)||(45281096-45281278)
chr8 (202-416)||(42877614-42877825)
chr8 (201-317)||(28418800-28418916)
chr8 (205-314)||(32797136-32797245)
chr8 (436-554)||(6398286-6398405)
chr8 (323-416)||(24192571-24192662)
chr8 (243-404)||(26697753-26697912)
chr8 (203-394)||(42872120-42872309)
chr8 (243-342)||(6398478-6398577)
chr8 (200-319)||(26696525-26696644)
chr8 (358-417)||(40437503-40437562)
chr8 (243-416)||(4810505-4810674)
chr8 (233-416)||(22551033-22551214)
chr8 (204-317)||(28420180-28420293)
chr8 (352-416)||(43202240-43202304)
chr8 (358-417)||(10669352-10669411)
chr8 (362-413)||(17455201-17455252)
chr8 (242-416)||(32693865-32694037)
chr8 (233-303)||(13197961-13198031)
chr8 (363-416)||(20180582-20180635)
chr8 (217-416)||(38696318-38696516)
chr8 (243-317)||(212718-212792)
chr8 (243-317)||(239462-239536)
chr8 (243-317)||(726341-726415)
chr8 (243-317)||(792817-792891)
chr8 (243-317)||(798842-798916)
chr8 (308-398)||(42878756-42878846)
chr8 (221-318)||(8570132-8570229)
chr8 (243-416)||(8571524-8571697)
chr8 (351-416)||(9854787-9854852)
chr8 (325-417)||(14840806-14840896)
chr8 (242-335)||(30787588-30787681)
chr8 (284-416)||(30786753-30786885)
chr8 (203-271)||(38697058-38697126)
chr8 (204-342)||(45437462-45437601)
chr8 (362-416)||(31845703-31845757)
chr8 (370-416)||(37400942-37400988)
chr8 (204-319)||(23708753-23708868)
chr8 (247-318)||(29103527-29103598)
chr8 (243-346)||(41630102-41630204)
chr8 (204-271)||(41743667-41743734)
chr8 (204-259)||(42878880-42878935)
chr8 (212-271)||(45394972-45395031)
chr8 (205-319)||(23702955-23703069)
chr8 (243-317)||(29104371-29104445)
chr8 (227-316)||(416560-416649)
chr8 (363-416)||(13513572-13513625)
chr8 (363-416)||(13603105-13603158)
chr8 (227-316)||(37400818-37400907)
[»] chr4 (75 HSPs)
chr4 (201-513)||(7707582-7707892)
chr4 (204-513)||(23201843-23202149)
chr4 (204-416)||(2312388-2312601)
chr4 (202-416)||(50546901-50547114)
chr4 (203-416)||(33231385-33231597)
chr4 (205-416)||(13165494-13165703)
chr4 (203-318)||(10168788-10168903)
chr4 (200-403)||(7708710-7708913)
chr4 (200-342)||(54866612-54866753)
chr4 (205-374)||(23203904-23204071)
chr4 (204-383)||(4714016-4714195)
chr4 (202-318)||(10167420-10167536)
chr4 (233-416)||(27850845-27851022)
chr4 (233-383)||(6349492-6349643)
chr4 (233-416)||(1794437-1794621)
chr4 (220-414)||(15449984-15450178)
chr4 (243-412)||(42810115-42810283)
chr4 (202-367)||(1588044-1588210)
chr4 (243-317)||(33232703-33232777)
chr4 (208-319)||(50548227-50548334)
chr4 (243-416)||(52239913-52240086)
chr4 (201-416)||(6348149-6348362)
chr4 (248-417)||(49343916-49344085)
chr4 (243-404)||(42871131-42871290)
chr4 (219-317)||(54865117-54865214)
chr4 (351-467)||(44498604-44498719)
chr4 (323-416)||(56085464-56085555)
chr4 (209-318)||(53204363-53204472)
chr4 (436-555)||(44503449-44503569)
chr4 (243-318)||(53205488-53205563)
chr4 (202-335)||(2310918-2311051)
chr4 (204-316)||(52241162-52241274)
chr4 (220-343)||(390230-390353)
chr4 (436-515)||(1189069-1189148)
chr4 (323-515)||(1519928-1520116)
chr4 (205-416)||(40723225-40723435)
chr4 (233-317)||(37882860-37882944)
chr4 (233-343)||(4871343-4871454)
chr4 (316-417)||(26496216-26496316)
chr4 (362-416)||(19750202-19750256)
chr4 (362-416)||(19789550-19789604)
chr4 (358-518)||(36845560-36845718)
chr4 (233-318)||(1188869-1188954)
chr4 (220-317)||(44501531-44501628)
chr4 (242-377)||(49342654-49342788)
chr4 (346-522)||(49896388-49896562)
chr4 (205-416)||(53432060-53432270)
chr4 (242-318)||(1190197-1190273)
chr4 (242-416)||(11438476-11438649)
chr4 (353-409)||(11968657-11968713)
chr4 (243-319)||(42872303-42872379)
chr4 (293-416)||(52138701-52138825)
chr4 (243-318)||(393643-393718)
chr4 (243-342)||(37884258-37884357)
chr4 (351-409)||(4871637-4871695)
chr4 (233-318)||(4129019-4129104)
chr4 (283-336)||(31965911-31965964)
chr4 (352-416)||(7053321-7053385)
chr4 (243-343)||(14524830-14524930)
chr4 (243-319)||(31968396-31968472)
chr4 (242-318)||(40792786-40792862)
chr4 (208-383)||(52963570-52963743)
chr4 (243-318)||(1587218-1587293)
chr4 (233-316)||(1829779-1829862)
chr4 (370-416)||(23103917-23103962)
chr4 (362-416)||(26629944-26629998)
chr4 (233-343)||(27847704-27847814)
chr4 (216-416)||(53435661-53435860)
chr4 (282-417)||(13166676-13166810)
chr4 (204-271)||(1831315-1831382)
chr4 (362-417)||(8682755-8682809)
chr4 (351-414)||(34326870-34326933)
chr4 (370-416)||(45535207-45535252)
chr4 (227-316)||(23317290-23317379)
chr4 (352-401)||(56157419-56157468)
[»] chr3 (62 HSPs)
chr3 (204-412)||(53614184-53614392)
chr3 (205-416)||(10732036-10732247)
chr3 (205-512)||(41264468-41264771)
chr3 (203-513)||(35370909-35371211)
chr3 (204-513)||(26886269-26886575)
chr3 (203-328)||(27837916-27838041)
chr3 (243-416)||(3208520-3208693)
chr3 (193-374)||(26887506-26887685)
chr3 (200-328)||(35372153-35372284)
chr3 (203-374)||(41263634-41263803)
chr3 (200-404)||(10730878-10731080)
chr3 (233-513)||(34819096-34819374)
chr3 (200-318)||(53612864-53612982)
chr3 (233-416)||(38242423-38242606)
chr3 (250-513)||(27841519-27841783)
chr3 (233-317)||(18458663-18458747)
chr3 (202-317)||(50809416-50809531)
chr3 (202-317)||(50866331-50866446)
chr3 (242-416)||(42684911-42685084)
chr3 (223-416)||(12107887-12108083)
chr3 (204-343)||(38240903-38241042)
chr3 (203-317)||(50810840-50810954)
chr3 (203-317)||(50864910-50865024)
chr3 (203-416)||(3455533-3455745)
chr3 (223-315)||(37736089-37736181)
chr3 (202-317)||(42686151-42686266)
chr3 (200-374)||(53622655-53622830)
chr3 (205-319)||(3817267-3817381)
chr3 (358-416)||(10338888-10338946)
chr3 (351-416)||(14745108-14745173)
chr3 (203-314)||(40244183-40244294)
chr3 (233-416)||(53420342-53420525)
chr3 (358-416)||(10301084-10301142)
chr3 (243-383)||(23443398-23443537)
chr3 (233-319)||(40364345-40364431)
chr3 (220-318)||(41544675-41544773)
chr3 (232-412)||(34818111-34818289)
chr3 (293-409)||(36175349-36175463)
chr3 (316-417)||(49379811-49379911)
chr3 (205-319)||(3811525-3811639)
chr3 (359-409)||(48083378-48083428)
chr3 (362-416)||(53194520-53194574)
chr3 (233-318)||(53194875-53194960)
chr3 (365-413)||(13621077-13621125)
chr3 (233-343)||(18442278-18442385)
chr3 (233-343)||(19487352-19487459)
chr3 (232-271)||(36176559-36176598)
chr3 (428-514)||(50809567-50809653)
chr3 (428-514)||(50866209-50866295)
chr3 (283-342)||(53187634-53187693)
chr3 (200-317)||(37735299-37735416)
chr3 (227-316)||(44182302-44182391)
chr3 (242-318)||(53421766-53421842)
chr3 (436-514)||(50810718-50810796)
chr3 (436-514)||(50865068-50865146)
chr3 (370-404)||(28909527-28909561)
chr3 (370-412)||(37415157-37415199)
chr3 (370-416)||(44602952-44602997)
chr3 (355-401)||(55328227-55328272)
chr3 (227-316)||(3807980-3808069)
chr3 (227-316)||(37981662-37981751)
chr3 (227-316)||(44175604-44175693)
[»] scaffold0077 (2 HSPs)
scaffold0077 (201-416)||(54091-54307)
scaffold0077 (232-318)||(52617-52703)
[»] scaffold0118 (1 HSPs)
scaffold0118 (242-513)||(43387-43656)
[»] scaffold0031 (2 HSPs)
scaffold0031 (243-416)||(125138-125313)
scaffold0031 (233-392)||(123995-124152)
[»] scaffold0019 (2 HSPs)
scaffold0019 (200-416)||(63039-63254)
scaffold0019 (202-317)||(61846-61961)
[»] scaffold0034 (2 HSPs)
scaffold0034 (247-416)||(108553-108722)
scaffold0034 (221-416)||(109654-109847)
[»] scaffold0472 (2 HSPs)
scaffold0472 (208-342)||(726-858)
scaffold0472 (436-546)||(543-653)
[»] scaffold0011 (2 HSPs)
scaffold0011 (202-412)||(127428-127637)
scaffold0011 (202-257)||(128657-128712)
[»] scaffold1152 (1 HSPs)
scaffold1152 (204-374)||(2426-2594)
[»] scaffold0201 (1 HSPs)
scaffold0201 (204-416)||(21124-21335)
[»] scaffold2071 (1 HSPs)
scaffold2071 (205-416)||(589-799)
[»] scaffold0219 (1 HSPs)
scaffold0219 (324-416)||(8099-8188)
[»] scaffold0078 (1 HSPs)
scaffold0078 (242-318)||(18847-18923)
[»] scaffold0013 (1 HSPs)
scaffold0013 (306-522)||(32670-32886)
[»] scaffold1251 (1 HSPs)
scaffold1251 (201-271)||(1137-1207)
[»] scaffold0128 (1 HSPs)
scaffold0128 (319-416)||(22093-22188)
[»] scaffold0141 (1 HSPs)
scaffold0141 (219-256)||(9871-9908)
[»] scaffold0035 (1 HSPs)
scaffold0035 (227-316)||(83210-83299)


Alignment Details
Target: chr6 (Bit Score: 532; Significance: 0; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 532; E-Value: 0
Query Start/End: Original strand, 8 - 581
Target Start/End: Original strand, 23392015 - 23392588
Alignment:
Q  8 agaagagacaagaaaatataaagtacgcgtgttttttgagggtcaccacaccagacccaaaagagtaataatgttctcaaaaatatcttcaaagacacta 107  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  23392015 agaagagacaagaaaatataaagtatgcgtgttttttgagggtcaccacaccagacccaaaagagtaataatgttctcaaaaatatcttcaaagacgcta 23392114  T
Q  108 tataatgttttgttttccgacgacttattctaaataaggtaattaaacggttaacgaatgacagggatatgctatttttagcttttaattccttttaggc 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23392115 tataatgttttgttttccgacgacttattctaaataaggtaattaaacggttaacgaatgacagggatatgctattttaagcttttaattccttttaggc 23392214  T
Q  208 ttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgc 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23392215 ttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgc 23392314  T
Q  308 caaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaa 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23392315 caaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaa 23392414  T
Q  408 ccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttca 507  Q
    ||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23392415 ccgtttgatattttttttttaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttca 23392514  T
Q  508 tcttcttcctccctcacttcataattcaacatcaccttcttcatcacactcataaaagatgaacaaccccattt 581  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23392515 tcttcttcctccctcacttcataattcaacatcaccttcttcatcacactcataaaagatgaacaaccccattt 23392588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 200 - 518
Target Start/End: Original strand, 17837609 - 17837925
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    |||| ||||||||||||| ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| |    
T  17837609 tttttggcttattagatcgtttggtcccttatttaatttattgttttcattttggttccacaattaataaaaatggcgttttagtccctcatcttttctt 17837708  T
Q  300 ccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattt 398  Q
    |||||| |||||||||||| ||  ||||||||||||||||||||||| ||| ||||||  ||| |||| |||||||||||||||||||||||||||||||    
T  17837709 ccgtttaccaaataaatcc-aacagttaagtttaaccccaaatgatgtctatggtggacaaacattaagagtggtccaccatagatcctattaattattt 17837807  T
Q  399 taatttcaaccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttc 498  Q
    ||||||||||||||||||           ||| |||||||||| ||||| ||| ||||||||||||||||  |  |||| |||||  ||||||  | | |    
T  17837808 taatttcaaccgtttgat--ttttcttaaaaacgataaccattggattaggcaggtctattttatcttacgatgtaccaccaacatctaattttttgtcc 17837905  T
Q  499 ttttcttcatcttcttcctc 518  Q
    ||||||||||||||||||||    
T  17837906 ttttcttcatcttcttcctc 17837925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 203 - 518
Target Start/End: Complemental strand, 29381850 - 29381537
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| ||||| ||||| ||| |||||||||||    
T  29381850 taggcttattagatcgtttggtcccttatttaatttcttattttcattttgatcccacaattaataaaaatgacgttttagtccttcatcttttcctccg 29381751  T
Q  303 tttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaa 401  Q
    ||| |||||||||||| ||  ||||||||||||||||||||||| ||  ||||||  |||||||| |||| |||||||||||||||||||||||||||||    
T  29381750 tttaccaaataaatcc-aacagttaagtttaaccccaaatgatgtctgtggtggacaaaccttaagagtgatccaccatagatcctattaattattttaa 29381652  T
Q  402 tttcaaccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttt 501  Q
    |||||||||||||||           |||||||||||||| ||||| ||| ||||||||||||||||  |  |||| |||||  ||||||  | | ||||    
T  29381651 tttcaaccgtttgat--tttttttcaaaaagataaccattggattaggcaggtctattttatcttacgatgtaccaccaacatctaattttttgtccttt 29381554  T
Q  502 tcttcatcttcttcctc 518  Q
    |||||||||||||||||    
T  29381553 tcttcatcttcttcctc 29381537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 655 - 811
Target Start/End: Original strand, 23392662 - 23392819
Alignment:
Q  655 ctcaaatcctctttagatccaaaatcannnnnnnncatacctcttcacttcattccttgattccctagaaacataaaa-attagggtcaatcaatttaat 753  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23392662 ctcaaatcctctttagatccaaaatcattttttttcatacctcttcacttcattccttgattccctagaaacataaaaaattagggtcaatcaatttaat 23392761  T
Q  754 cctctttttctcaattcaatgtgcaaatcgcaaattcaaatggctcacaaactcacca 811  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23392762 cctctttttctcaattcaatgtgcaaatcgcaaattcaaatggctcacaaactcacca 23392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 203 - 416
Target Start/End: Complemental strand, 5187742 - 5187529
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||| ||| |||||||  ||||    
T  5187742 taggcttattagattgtttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagttccttacctttttgtccg 5187643  T
Q  303 tttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaa 401  Q
    ||||||||||||||||| |  ||||||||||| |||||||| || |||  ||||| |||||||||||||||| |||||||||||||||||||||| ||||    
T  5187642 tttgccaaataaatcctgacggttaagtttaa-cccaaatgttgtctatagtggaccaaccttaaaagtggttcaccatagatcctattaattatattaa 5187544  T
Q  402 tttcaaccgtttgat 416  Q
    ||||||| |||||||    
T  5187543 tttcaactgtttgat 5187529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 204 - 409
Target Start/End: Complemental strand, 23397473 - 23397270
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23397473 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccgt 23397374  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
    |||||||||||||||  |  ||||| ||||||  ||||||   ||| |||||| ||||||||||||| ||||||| || | | |||||||| | ||||||    
T  23397373 ttgccaaataaatcccgaccgttaaatttaacttcaaatg--tctatggtggaccaaccttaaaagtagtccaccgtataccttattaattttgttaatt 23397276  T
Q  404 tcaacc 409  Q
    | ||||    
T  23397275 ttaacc 23397270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 204 - 513
Target Start/End: Complemental strand, 18346869 - 18346564
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||   |||||||| |||  ||| ||    
T  18346869 aggcttattagatcatttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggcgttttgatccctcacgtttgtctctgt 18346770  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 402  Q
    |||||||||||||||  | |||||| ||||||| |||||||||  || |||| | ||||||||| |||||||||| ||| ||||||||||||||||||||    
T  18346769 ttgccaaataaatcc-gactgttaattttaacctcaaatgatgtttacggtgaaccaaccttaagagtggtccactataaatcctattaattattttaat 18346671  T
Q  403 ttcaaccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttctttt 502  Q
    || |||||||||||           |||||  ||||||| ||||||||||||||||||||||||||  |  |||| |||||| ||||||  |||  ||||    
T  18346670 ttaaaccgtttgat---ttttttttaaaagtaaaccattggattatgcaagtctattttatcttacgatgtaccaccaacacctaattt-gtttcatttt 18346575  T
Q  503 cttcatcttct 513  Q
    |||||||||||    
T  18346574 cttcatcttct 18346564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 205 - 409
Target Start/End: Original strand, 29380189 - 29380391
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  29380189 ggcttattagatcatttggtcccttatttaatttcttgttttcattttggtcccacaattaacaaaaatggcgttttagtccctcaccttttcttccgtt 29380288  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 404  Q
    ||||||||||||||  |  ||||| ||||||  ||||||    || |||||||||||||||||||| ||||| | |||| | |||||||| | |||||||    
T  29380289 tgccaaataaatcccgaccgttaattttaacttcaaatg--tatatggtggatcaaccttaaaagtagtccatcgtagaccttattaattttgttaattt 29380386  T
Q  405 caacc 409  Q
     ||||    
T  29380387 taacc 29380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 17839259 - 17839144
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17839259 taggcttattagatcgtttggtcccttatttaatttcttgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccg 17839160  T
Q  303 tttgccaaataaatcc 318  Q
    ||||||||||||||||    
T  17839159 tttgccaaataaatcc 17839144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 205 - 342
Target Start/End: Complemental strand, 6702988 - 6702852
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||    
T  6702988 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggcgtttta-tccctcacgttttcctccgtt 6702890  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    ||||||||||||||| | ||||||||||||| ||||||    
T  6702889 tgccaaataaatcctgactgttaagtttaactccaaat 6702852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 2688044 - 2687929
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||  ||||    
T  2688044 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaaatggcgttttagtccctcacctttttatccg 2687945  T
Q  303 tttgccaaataaatcc 318  Q
    ||||||||||||||||    
T  2687944 tttgccaaataaatcc 2687929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 203 - 381
Target Start/End: Complemental strand, 32507146 - 32506969
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||  ||||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||| |||||||||| |||| ||| |    
T  32507146 taggcttattagattgtttggtcacttatttaatttcatgttttcattttgatcccacatttaataaaaatggtgttttagtccctcacatttttctcag 32507047  T
Q  303 tttgccaaataaatcc-taaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccata 381  Q
    |||||||||||||||| | | |||||||||||||||||||| || ||| |||||| ||||||||| ||||||| ||||||    
T  32507046 tttgccaaataaatccttgactgttaagtttaaccccaaat-at-ctatggtggaccaaccttaagagtggtctaccata 32506969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 205 - 342
Target Start/End: Original strand, 6701378 - 6701515
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||  ||| |||||||||| ||||||||||||    
T  6701378 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggtattttagtccctcacattttcctccgtt 6701477  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    ||||||||||||| |  |||| || ||||||| |||||    
T  6701478 tgccaaataaatcgtttatgtcaactttaacctcaaat 6701515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 200 - 318
Target Start/End: Original strand, 5186561 - 5186679
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||| || ||||| | ||| ||| ||||||||    
T  5186561 ttttaggcttattagatcatttgatcccttatttaatttcatgttttcattttggtcacacaattaataaaagtgacgttttaatccatcatcttttcct 5186660  T
Q  300 ccgtttgccaaataaatcc 318  Q
    |||||||||||||||||||    
T  5186661 ccgtttgccaaataaatcc 5186679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 2687242 - 2687341
Alignment:
Q  219 tttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||    
T  2687242 tttggtcccttatttaatttcatgttttcattttgatcccacaattaataaaaatggcgttttagtccttcacattttcctccgtttgccaaataaatcc 2687341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 208 - 343
Target Start/End: Original strand, 29722664 - 29722799
Alignment:
Q  208 ttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgc 307  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||||||| |||      
T  29722664 ttattagatcatttggtcccttatttaatttcatgttttcattttgatcccataattaataaaaatggcgttttagtccctcacattttcctccattttg 29722763  T
Q  308 caaataaatcctaaatgttaagtttaaccccaaatg 343  Q
    ||||||||||  || |||||| ||||| || |||||    
T  29722764 caaataaatctcaactgttaaatttaatccaaaatg 29722799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 203 - 295
Target Start/End: Complemental strand, 12256704 - 12256612
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttt 295  Q
    ||||||||||||||  ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| |||||| ||||||||||||||    
T  12256704 taggcttattagattgtttggtcccttatttaatttcatgttttcgttttggtcgcacaattaataaaaatagcgttttagtccctcaccttt 12256612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 221 - 416
Target Start/End: Complemental strand, 7311826 - 7311632
Alignment:
Q  221 tggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatccta 320  Q
    ||||||||||  ||||||   |||||||||||| ||||||||||||||||  |  | |||  |||||| || ||||  ||  |||||||||||||||||     
T  7311826 tggtcccttaaataattttaagttttcattttgatcccacaattaataaacgtaccttttg-gtcccttacttttttatctatttgccaaataaatcctc 7311728  T
Q  321 aatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |  ||||||||||| || |||||||| ||| |||| | ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||    
T  7311727 acagttaagtttaatcc-aaatgatgtctatggtgaaccaaccttaagagtggtccaccataaatcctattaattattttaatttaaaccgtttgat 7311632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 243 - 391
Target Start/End: Original strand, 12669759 - 12669906
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc-ctaaatgttaagtttaaccccaaa 341  Q
    |||| ||||||||| |||||||||||||| |   |||| ||||| |||| ||||||||||||||| ||||||||| |||| |||||| ||||||| ||||    
T  12669759 tttttattttggtctcacaattaataaaactcaagttttagtccgtcactttttcctccgtttgctaaataaatctctaactgttaactttaacctcaaa 12669858  T
Q  342 tgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctatta 391  Q
    || || || |||||| ||||||||| |||||||||||||||||| |||||    
T  12669859 tg-tg-tatggtggaccaaccttaagagtggtccaccatagatcatatta 12669906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 205 - 335
Target Start/End: Original strand, 232174 - 232303
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    |||||| ||||||  |||||||||||  |||||||   ||||||||||||||||| |||||||||||    ||||| |||||||||| ||||||||||||    
T  232174 ggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaaca--cgttttagtccctcactttttcctccgtt 232271  T
Q  305 tgccaaataaatcctaaa-tgttaagtttaac 335  Q
    |||||||||||||| ||| |||||| ||||||    
T  232272 tgccaaataaatcccaaactgttaactttaac 232303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 204 - 319
Target Start/End: Complemental strand, 6452630 - 6452515
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||| ||||  |||||||| ||  |||||||  |||||||||||||||||| |||||||||||    ||||| |||||||||  |||||||||||    
T  6452630 aggcttatttgatccattggtcccctaaataatttcaagttttcattttggtcccataattaataaaacgtacgtttgagtccctcattttttcctccgt 6452531  T
Q  304 ttgccaaataaatcct 319  Q
    ||||||||||||||||    
T  6452530 ttgccaaataaatcct 6452515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 224 - 317
Target Start/End: Original strand, 27080941 - 27081034
Alignment:
Q  224 tcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    |||||||  |||||||| |||||||||||||||  ||||||||||||| |  | |||||||||||||| |||| |||||||||| |||||||||    
T  27080941 tcccttaaataatttcgagttttcattttggtcttacaattaataaaatttacatttaagtccctcacttttttctccgtttgcgaaataaatc 27081034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 233 - 319
Target Start/End: Original strand, 6452310 - 6452396
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcct 319  Q
    |||||||  |||||| ||||||||| | |||||||||||    ||||| |||||||||| |||||||||||||||||||||||||||    
T  6452310 taatttcaagttttcgttttggtcctataattaataaaaggtacgttttagtccctcactttttcctccgtttgccaaataaatcct 6452396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 11722941 - 11722994
Alignment:
Q  363 ttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||    
T  11722941 ttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgat 11722994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 27082234 - 27082168
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    ||||||||  ||||||||||||||||||||||||||||||    ||||||||||||||| |||||||    
T  27082234 taatttcgaattttcattttggtcccacaattaataaaaagtatgtttaagtccctcactttttcct 27082168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 204 - 316
Target Start/End: Complemental strand, 15730149 - 15730036
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaata-aaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||||||||||||   ||||||||| | ||||||||   |||||||||||||||||||||||||| ||||   | |||  ||||||||| ||||| ||||    
T  15730149 aggcttattagattcattggtccctcaattaatttccatttttcattttggtcccacaattaataaaaaaatacattttggtccctcactttttcttccg 15730050  T
Q  303 tttgccaaataaat 316  Q
    ||||| ||||||||    
T  15730049 tttgctaaataaat 15730036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 242 - 376
Target Start/End: Original strand, 7310311 - 7310443
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaa 341  Q
    |||||||||||||||||| |||||||||||     |||||||||| |||  |||| |||||||| |||||||||||     ||||||||||||| |||||    
T  7310311 gttttcattttggtcccataattaataaaacgtatgtttaagtccttcaggtttttctccgtttaccaaataaatctcggctgttaagtttaactccaaa 7310410  T
Q  342 tgatgctaaggtggatcaaccttaaaagtggtcca 376  Q
    ||   ||| |||| | ||||||||||| |||||||    
T  7310411 tg--tctatggtgaaccaaccttaaaaatggtcca 7310443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 204 - 290
Target Start/End: Complemental strand, 233683 - 233597
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctca 290  Q
    ||||||| ||||||| ||||||| |||  |||||||   ||||||||||||||||| ||||||||||||   ||||| |||||||||    
T  233683 aggcttaatagatcaattggtcctttaaataatttcaatttttcattttggtcccataattaataaaaaacacgttttagtccctca 233597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 12256557 - 12256614
Alignment:
Q  213 agatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaa 270  Q
    ||||| ||||||||||||||||||||| | |||| |||||||||| | ||||||||||    
T  12256557 agatcgtttggtcccttatttaatttcatatttttattttggtcctaaaattaataaa 12256614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 435 - 514
Target Start/End: Original strand, 232327 - 232406
Alignment:
Q  435 aaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttct-tttcttcatcttctt 514  Q
    ||||||| ||||| ||| |||||||||||||||| || || ||||||||  ||| |||||||||| |||||||||||||||    
T  232327 aaccattggattacgcatgtctattttatcttacggtgaatcaacaacatctaa-ttaattttctctttcttcatcttctt 232406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 7308567 - 7308499
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    |||||||| ||| |||||||| |||||| ||||||||  |||||||||||||||| | || ||||||||    
T  7308567 taggcttaataggtcatttggccccttaattaatttcaagttttcattttggtcctataagtaataaaa 7308499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 11967360 - 11967424
Alignment:
Q  352 gtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||| ||||||| | || |||||| |||||||| |||||||||||||||||| ||| |||||||    
T  11967360 gtggaccaaccttgagaggggtccatcatagatcatattaattattttaatttaaactgtttgat 11967424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 205 - 505
Target Start/End: Original strand, 22335977 - 22336274
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  22335977 ggcttattagatcttttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctcagtt 22336076  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 404  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22336077 tgccaaataaatcccgaatgttaagtttaaccccaaatgatgctatggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 22336176  T
Q  405 caaccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttct 504  Q
    |||||| ||||||          ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  22336177 caaccg-ttgata--tttttttaaaaagataaccattagattgtgcaagtctattttatcttactgtaaaccaacaacacctaatttaatttccttttct 22336273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 204 - 412
Target Start/End: Complemental strand, 13564358 - 13564150
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||    
T  13564358 aggcttattagatcatttagtcccttatttaatttcttgttttcattttggtcccacaattaataaaactggcgttttagtccctcacattttcctccgt 13564259  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 402  Q
    |||||||||||||||   | ||||||||||||||||||| ||| ||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  13564258 ttgccaaataaatcc-cgacgttaagtttaaccccaaataatgtctatggtggatcatccttaagagtggtccaccatagatcctattaattattttaat 13564160  T
Q  403 ttcaaccgtt 412  Q
    || |||||||    
T  13564159 ttgaaccgtt 13564150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 204 - 416
Target Start/End: Complemental strand, 11502541 - 11502328
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    |||||||||||||| |||||||| |||  ||||||| ||||||||||||| ||||||| ||||||||||| |||  | ||||||||| ||||| ||| ||    
T  11502541 aggcttattagatcgtttggtcctttaactaatttcatgttttcattttgatcccacatttaataaaaattgcgaattagtccctcaacttttgctctgt 11502442  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 402  Q
    ||||||||||||||| ||  ||||||||||||| ||||||||| ||| ||| || ||||||||| ||||||||||||||||||||| |||||||||||||    
T  11502441 ttgccaaataaatcccaacagttaagtttaacctcaaatgatgtctatggtagaccaaccttaagagtggtccaccatagatcctagtaattattttaat 11502342  T
Q  403 ttcaaccgtttgat 416  Q
    |||| |||||||||    
T  11502341 ttcagccgtttgat 11502328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 200 - 513
Target Start/End: Original strand, 22537552 - 22537861
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    |||||||||||||||||| |||| |||||||||||||||  | ||||||||||||||||||||||| |||||||| | |||   |||||||| |||  ||    
T  22537552 ttttaggcttattagatcgtttgctcccttatttaattttatattttcattttggtcccacaattactaaaaatgacattttgatccctcacgtttgtct 22537651  T
Q  300 ccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattt 398  Q
    | ||||||||||||||||| || |||||| ||||||| |||||||||  || |||| | ||||||||| |||| ||||||||||||||||||||||||||    
T  22537652 ctgtttgccaaataaatcc-aactgttaattttaacctcaaatgatgtttacggtgaaccaaccttaatagtgatccaccatagatcctattaattattt 22537750  T
Q  399 taatttcaaccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttc 498  Q
    |||||| |||||||||||           |||||  ||||||| ||||||||| ||||||||||||||||  | ||||| |||||| ||||||  |||      
T  22537751 taatttaaaccgtttgat----tttttttaaaagggaaccattggattatgcaggtctattttatcttacgatgaaccaccaacacctaattttttttca 22537846  T
Q  499 ttttcttcatcttct 513  Q
    |||||||||||||||    
T  22537847 ttttcttcatcttct 22537861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 205 - 416
Target Start/End: Original strand, 32254987 - 32255199
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||| |||||||||||||| |  |||||||   |||| |||||||||||| |||||||||||    | |||   |||||||| ||||||||||||    
T  32254987 ggcttattaaatcatttggtccctcaaataatttcaaatttttattttggtcccataattaataaaacgtacattttgatccctcactttttcctccgtt 32255086  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaa-ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
    ||||||||||||||  |  ||||||||||||||||||||||| | | |||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  32255087 tgccaaataaatcccgacggttaagtttaaccccaaatgatgtttatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaatt 32255186  T
Q  404 tcaaccgtttgat 416  Q
    |||||||||||||    
T  32255187 tcaaccgtttgat 32255199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 200 - 416
Target Start/End: Original strand, 3413525 - 3413740
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    |||| ||||||||||||| ||||||||  ||  ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||    
T  3413525 tttttggcttattagatcgtttggtcctctaaataatttcgtgttttcattttggtcctacaattaataaaaatggcgttttagtccctcaccttttact 3413624  T
Q  300 ccgtttgccaaataaat-cctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattt 398  Q
    | ||||||||||||||| ||||| |||||||||||||  || |||   ||| |||||||||| ||||| ||| ||||||||||||    ||||||| |||    
T  3413625 ctgtttgccaaataaatccctaactgttaagtttaacttcagatg--tctatggtggatcaatcttaagagttgtccaccatagacttcattaatttttt 3413722  T
Q  399 taatttcaaccgtttgat 416  Q
     ||||| |||||||||||    
T  3413723 aaattttaaccgtttgat 3413740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 655 - 801
Target Start/End: Original strand, 22336398 - 22336547
Alignment:
Q  655 ctcaaatcctctttagatccaaaatcannnnnnnncatacctcttcacttcattccttgattccctagaaacata----aaaattagggtcaatcaattt 750  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||||| |||||||| |||||||||    |||||||||||||||||||||    
T  22336398 ctcaaatcctctttagatccaaaatcattttttt-catacctcttcacttcattccctgattcccgagaaacatataaaaaaattagggtcaatcaattt 22336496  T
Q  751 aatcctctttttctcaattcaatgtgcaaatcgcaaattcaaatggctcac 801  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  22336497 aatcctatttttctcaattcaatgtgcaaatcacaaattcaaatggctcac 22336547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 205 - 317
Target Start/End: Complemental strand, 22538966 - 22538854
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  22538966 ggcttattagatcgtttggtcccttatttaatttcatgttttctttttggtcccacaattaataaaaatgacgttttagtccctcatcttttcctccgtt 22538867  T
Q  305 tgccaaataaatc 317  Q
    |||||||||||||    
T  22538866 tgccaaataaatc 22538854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 207 - 373
Target Start/End: Original strand, 11501180 - 11501344
Alignment:
Q  207 cttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttg 306  Q
    ||||||||||| |||||||| ||| |||||||| ||||||||||||||||||||| ||||||||||| || ||| |||||||||||||||||||| ||||    
T  11501180 cttattagatcgtttggtcctttaattaatttcatgttttcattttggtcccacagttaataaaaatagcattttagtccctcaccttttcctccatttg 11501279  T
Q  307 ccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggt 373  Q
    ||||||||||||  | |||||| ||||||  ||||||   ||| |||||| ||||||||||||||||    
T  11501280 ccaaataaatcccgactgttaactttaacttcaaatg--tctatggtggaccaaccttaaaagtggt 11501344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 242 - 416
Target Start/End: Complemental strand, 43460904 - 43460730
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaa 341  Q
    ||||||||||||||||||||||||||||||    | ||| |||||||||| ||||||||| ||||||||||||||||| |  |||||||||||| | |||    
T  43460904 gttttcattttggtcccacaattaataaaacgtacattttagtccctcactttttcctccatttgccaaataaatcctcacagttaagtttaactc-aaa 43460806  T
Q  342 tgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    | ||| ||| |||||| |||| |||| ||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  43460805 ttatgtctatggtggaccaactttaagagtggtccaccatagatcctattaattattttaatttaaaccctttgat 43460730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 204 - 404
Target Start/End: Complemental strand, 22337489 - 22337292
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    |||||||||||||  |||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||  || ||||||| || |||||||||||    
T  22337489 aggcttattagattgtttggtcccttatttagtttcatgttttcattttgatcccacaattaataaaaatggc-attcagtcccttacattttcctccgt 22337391  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
    |||||||||||||||| |  ||||| ||||||  ||||||   ||| |||||| |||||||||| || || |||| |||| | |||||||| | ||||||    
T  22337390 ttgccaaataaatcctgaccgttaaatttaacttcaaatg--tctatggtggaccaaccttaaatgtagtacaccgtagaccttattaattttgttaatt 22337293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 203 - 335
Target Start/End: Original strand, 13562818 - 13562950
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||| |||||||||| |||| ||| |    
T  13562818 taggcttattagatcgtttagtcccttatttaatttcttgtttttattttggtcccacaagtaataaaaatggcgttttagtccctcacatttttctctg 13562917  T
Q  303 tttgccaaataaatcctaaatgttaagtttaac 335  Q
    ||| ||||||||||||  | |||||| ||||||    
T  13562918 tttaccaaataaatcccgattgttaactttaac 13562950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 200 - 343
Target Start/End: Original strand, 24844254 - 24844397
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    ||||||| ||||| ||||  ||| |||||||||||||||  |||||| ||||| || | |||||||||| ||||||||||| |||||||||| ||||| |    
T  24844254 ttttaggtttattggatcgattgatcccttatttaattttatgtttttatttttgttctacaattaatacaaatggcgttttagtccctcacattttctt 24844353  T
Q  300 ccgtttgccaaataaatcctaaatgttaagtttaaccccaaatg 343  Q
    |||||||||||||||||||| | |||||||||||||| ||||||    
T  24844354 ccgtttgccaaataaatcctcactgttaagtttaacctcaaatg 24844397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 233 - 417
Target Start/End: Original strand, 40508404 - 40508587
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaa-tgttaagtt 331  Q
    |||||||  ||||||||||| ||||||||||||||||||    |||||||||||||||| |||||||||||| ||||||||||||||    |||||||||    
T  40508404 taatttcaagttttcatttttgtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgttagccaaataaatccttcggtgttaagtt 40508503  T
Q  332 taaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
    ||| ||||||||   ||| |||||||||| ||||| ||| |||||||||||||   ||||||| ||| ||||| ||||||||||||    
T  40508504 taatcccaaatgt--ctatggtggatcaatcttaagagttgtccaccatagatttcattaattttttaaattttaaccgtttgata 40508587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 233 - 409
Target Start/End: Original strand, 43459481 - 43459655
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  ||||||||||||||||||||||||||||||   ||||||||||||||||  |||||||||||||||||||||||||     ||||||||||    
T  43459481 taatttcaagttttcattttggtcccacaattaataaaacgtgcgtttaagtccctcatgttttcctccgtttgccaaataaatctcggctgttaagttt 43459580  T
Q  333 aaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaacc 409  Q
    ||| |||||||   ||| |||||||||||||||||| |||| || | |||| | |||||||| | ||||||| ||||    
T  43459581 aactccaaatg--tctatggtggatcaaccttaaaaatggtacatcgtagaccttattaattttgttaattttaacc 43459655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 3414952 - 3414838
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||| | ||| ||||| ||  ||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||||||| ||    
T  3414952 ggcttattagaacgtttagtcccctaaataatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccttcactttttcctccatt 3414853  T
Q  305 tgccaaataaatcct 319  Q
    |||||||||||||||    
T  3414852 tgccaaataaatcct 3414838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 233 - 416
Target Start/End: Complemental strand, 4300138 - 4299956
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc-ctaaatgttaagtt 331  Q
    |||||||  ||||||||||||||||||||||||||||||    |||||||||||||||| |||||||| ||||||||||||||||  |   |||||||||    
T  4300138 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcactttttcctctgtttgccaaataaatctttcggtgttaagtt 4300039  T
Q  332 taaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||||||| |   |||  ||||||||||||||| ||||| ||||||||||    ||||||| ||| |||||  ||||||||||    
T  4300038 taaccccaaacg--tctatagtggatcaaccttaagagtggcccaccatagacttcattaattttttaaattttgaccgtttgat 4299956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 233 - 383
Target Start/End: Complemental strand, 40509824 - 40509675
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc-ctaaatgttaagtt 331  Q
    |||||||  ||||||||||||||||||||||||||||||    ||||||||| |||||| ||||||||||||| |||||||||||  |   |||||||||    
T  40509824 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgtttaccaaataaatcattcggtgttaagtt 40509725  T
Q  332 taaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccataga 383  Q
    ||||||||||||   |||  ||||| ||||||||| ||||||||||||||||    
T  40509724 taaccccaaatg--tctatagtggaccaaccttaagagtggtccaccataga 40509675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 233 - 383
Target Start/End: Complemental strand, 22115254 - 22115105
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc-taaatgttaagtt 331  Q
    |||||||  ||||||||||||||||||||||||||||||    ||||||||| |||||| ||||||||||||  |||||||||||  |   |||||||||    
T  22115254 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagttcctcactttttcctccgttnaccaaataaatcnttcggtgttaagtt 22115155  T
Q  332 taaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccataga 383  Q
    ||||||||||||   |||  ||||| ||||||||| ||||||||||||||||    
T  22115154 taaccccaaatg--tctatagtggaccaaccttaagagtggtccaccataga 22115105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 529 - 585
Target Start/End: Original strand, 22336274 - 22336330
Alignment:
Q  529 taattcaacatcaccttcttcatcacactcataaaagatgaacaaccccatttccag 585  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22336274 taattcaacatcaccttcttcatcacactcataaaagatgaacaaccccatttccag 22336330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 205 - 399
Target Start/End: Complemental strand, 40812731 - 40812539
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| |||| |||||||||||||||| ||||||||||||||| ||| |||||||||||    |||||   |||||||  |||||||| |||    
T  40812731 ggcttattagatcgtttgatcccttatttaatttcatgttttcattttggttccataattaataaaacgtacgttttgctccctcatattttcctctgtt 40812632  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttt 399  Q
    || |||||| ||||  | |||| | |||||| |||||| |  | | |||||| |||||||||||||| |||| | |||||| |||||||| ||||    
T  40812631 tgtcaaatatatcccgactgtttactttaactccaaataa--ccatggtggaccaaccttaaaagtgatccatcgtagatcttattaattttttt 40812539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 200 - 416
Target Start/End: Original strand, 47059101 - 47059319
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    |||| ||||||||||||    ||||||| || |||||||   |||||||||||||||| |||||||||||||    |||||   |||||||| |||||||    
T  47059101 ttttgggcttattagattcaatggtcccctaattaattttaagttttcattttggtcctacaattaataaaatgtacgttttgatccctcactttttcct 47059200  T
Q  300 ccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaa--ttatt 397  Q
    |||||||||||||||||||| |  ||||||||||||||   |  |  ||| |||||| ||||||||| ||| | |||||||||| | ||||||  || ||    
T  47059201 ccgtttgccaaataaatcctgaccgttaagtttaaccctccaaaagtctatggtggagcaaccttaagagtagcccaccatagaccttattaattttttt 47059300  T
Q  398 ttaatttcaaccgtttgat 416  Q
    ||||||| |||||||||||    
T  47059301 ttaatttaaaccgtttgat 47059319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 40738957 - 40738843
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaa-tggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||||||| ||||||||| ||   |||||| |||||| |||||||||||| ||||||||||||  ||||||| |||||||||| |||| ||| ||    
T  40738957 ggcttattagatcgtttggtcccctaaacaatttcatgtttttattttggtcccataattaataaaaacaggcgttttagtccctcactttttgctctgt 40738858  T
Q  304 ttgccaaataaatcc 318  Q
    |||||||||||||||    
T  40738857 ttgccaaataaatcc 40738843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 416
Target Start/End: Original strand, 35295842 - 35295907
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35295842 ggtggaccaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgat 35295907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 284 - 416
Target Start/End: Original strand, 40811397 - 40811529
Alignment:
Q  284 tccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatag 382  Q
    |||||||  ||||||||||| | | ||||||||||| |  ||||| |||||||| |||||||| ||| |||||| ||||||||| |||||||||||||||    
T  40811397 tccctcatattttcctccgtatactaaataaatcctgacggttaactttaaccc-aaatgatgtctatggtggaccaaccttaagagtggtccaccatag 40811495  T
Q  383 atcctattaattattttaatttcaaccgtttgat 416  Q
    || ||||||||  ||||||||| |||||||||||    
T  40811496 attctattaatatttttaatttaaaccgtttgat 40811529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 242 - 417
Target Start/End: Original strand, 4298748 - 4298922
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc-ctaaatgttaagtttaaccccaa 340  Q
    ||||| |||||| |||||||||||||||||   | ||||||||||||||| |||||||| ||||||||||||||||  |  |||||||||||||||| ||    
T  4298748 gtttttattttgatcccacaattaataaaatgtgggtttaagtccctcactttttcctctgtttgccaaataaatcatttgatgttaagtttaaccctaa 4298847  T
Q  341 atgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
    | | || || |||||||||| | ||| ||| ||||||||||||    ||||||| ||| ||||| ||||||||||||    
T  4298848 acg-tg-tatggtggatcaatcctaagagttgtccaccatagacttcattaattttttaaattttaaccgtttgata 4298922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 203 - 319
Target Start/End: Original strand, 45454034 - 45454150
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||||||||| ||| |  ||||||| || ||||||||  ||||||||||||||| || |||||||||||    ||||| |||||||||| ||||||||||    
T  45454034 taggcttatttgattaaatggtcccctaattaatttcacgttttcattttggtctcataattaataaaacatacgttttagtccctcactttttcctccg 45454133  T
Q  303 tttgccaaataaatcct 319  Q
    |||||||||||||||||    
T  45454134 tttgccaaataaatcct 45454150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 221 - 404
Target Start/End: Original strand, 46835689 - 46835872
Alignment:
Q  221 tggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatccta 320  Q
    ||||||||||  |||||||   ||||| |||| |||| |||||||||||||      |||||||| ||||  |||||||| ||||| ||||||||||       
T  46835689 tggtcccttaaataatttcaaattttctttttagtcctacaattaataaaatgtatttttaagtctctcaatttttcctctgtttgtcaaataaatctcg 46835788  T
Q  321 aatgttaagtttaaccccaaatgatgctaa-ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 404  Q
    || ||||||||||||||||||||||| | | |||||||||  ||||||  ||||| |||||| ||||||||||||||||||||||    
T  46835789 aa-gttaagtttaaccccaaatgatgtttatggtggatcattcttaaagttggtctaccatatatcctattaattattttaattt 46835872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 316 - 417
Target Start/End: Original strand, 41328328 - 41328428
Alignment:
Q  316 tcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttg 414  Q
    |||||| |||||| ||||||||| ||  ||| ||| |||||| |||| |||||| |||||||||||||||||||||||||||| |||||| |||||||||    
T  41328328 tcctaactgttaactttaacccccaa--atgtctatggtggaacaactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttg 41328425  T
Q  415 ata 417  Q
    |||    
T  41328426 ata 41328428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 353 - 415
Target Start/End: Original strand, 2414890 - 2414952
Alignment:
Q  353 tggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttga 415  Q
    |||| ||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  2414890 tggaccaaccttaaaagtggtccaccatagatcctattaattttcttaatttaaaccgtttga 2414952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 221 - 343
Target Start/End: Complemental strand, 45455474 - 45455352
Alignment:
Q  221 tggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatccta 320  Q
    |||||||||| ||||||||   |||||||||||||||||||||||||||||    | |||   |||||||| |||| |||||||||||||||||||| |     
T  45455474 tggtcccttaattaatttcaaattttcattttggtcccacaattaataaaacgtacattttgatccctcacttttttctccgtttgccaaataaatcatg 45455375  T
Q  321 aatgttaagtttaaccccaaatg 343  Q
      ||||||||||||||| |||||    
T  45455374 gctgttaagtttaaccctaaatg 45455352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 243 - 343
Target Start/End: Complemental strand, 24283055 - 24282955
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc-taaatgttaagtttaaccccaaa 341  Q
    ||||||||||||| |||||||||| ||| | |||| || |||||||||| |||||||||||||||||||||||||| |   |||||| ||||||||||||    
T  24283055 ttttcattttggttccacaattaaaaaaca-ggcgctttagtccctcacattttcctccgtttgccaaataaatccatgggtgttaactttaaccccaaa 24282957  T
Q  342 tg 343  Q
    ||    
T  24282956 tg 24282955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 323 - 415
Target Start/End: Original strand, 46201248 - 46201338
Alignment:
Q  323 tgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttga 415  Q
    |||||||||||||||||||||   ||| |||| | ||||||||| |||||||||||||||||| |||||||||||||||| | ||| ||||||    
T  46201248 tgttaagtttaaccccaaatgt--ctatggtgaaccaaccttaagagtggtccaccatagatcatattaattattttaatataaactgtttga 46201338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 201 - 317
Target Start/End: Original strand, 32602927 - 32603043
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctc 300  Q
    |||||||||||| ||||  ||||||| | |  |||||||  ||||| |||||||||||| |||||||||||    ||||| |||||||||| |||| |||    
T  32602927 tttaggcttatttgatccattggtccttcaaataatttcaagtttttattttggtcccataattaataaaacgtacgttttagtccctcactttttactc 32603026  T
Q  301 cgtttgccaaataaatc 317  Q
    |||||||||||||||||    
T  32603027 cgtttgccaaataaatc 32603043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 208 - 318
Target Start/End: Original strand, 24281075 - 24281186
Alignment:
Q  208 ttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaa-tggcgtttaagtccctcaccttttcctccgtttg 306  Q
    ||||||||||||||| |||  ||  ||||||| |||||| |||||||||||||||||||||||||   |||||| |||||||||  ||||  |||||| |    
T  24281075 ttattagatcatttgatcctctaaataatttcatgtttttattttggtcccacaattaataaaaacaagcgttttagtccctcaattttttatccgttcg 24281174  T
Q  307 ccaaataaatcc 318  Q
    ||||||||||||    
T  24281175 ccaaataaatcc 24281186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 242 - 392
Target Start/End: Complemental strand, 47060556 - 47060408
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaa 341  Q
    |||||||||||||||| | |||||||||||    |||||  |||||||||| |||  ||||||||||||||||||||  | ||||||||||||| |||||    
T  47060556 gttttcattttggtcctataattaataaaacgtacgttttggtccctcacccttttttccgtttgccaaataaatccggactgttaagtttaacaccaaa 47060457  T
Q  342 tgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaa 392  Q
    ||    || |||||| ||||||||| | | |||||||||||| | ||||||    
T  47060456 tg--tatatggtggaccaaccttaagaatagtccaccatagaccttattaa 47060408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 358 - 416
Target Start/End: Original strand, 16756021 - 16756079
Alignment:
Q  358 caaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||| |||| ||||||    
T  16756021 caaccttaaaagttgtctaccatagatcctattaattattttaattttaaccatttgat 16756079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 201 - 319
Target Start/End: Original strand, 33096863 - 33096981
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctc 300  Q
    |||||||||||| ||||   |||||||| |  |||||||  ||| ||||||| | |||||||||||||||| |  | |||  ||||||||| ||||||||    
T  33096863 tttaggcttatttgatccaatggtccctcaaataatttcaagttctcattttaggcccacaattaataaaacttaccttttggtccctcactttttcctc 33096962  T
Q  301 cgtttgccaaataaatcct 319  Q
    |||||||||||||||||||    
T  33096963 cgtttgccaaataaatcct 33096981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 316 - 416
Target Start/End: Original strand, 39981426 - 39981525
Alignment:
Q  316 tcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttg 414  Q
    |||||| |||||| ||||||||| ||  ||| ||| |||||| |||| |||||| ||||||||||||||||| |||||||||| |||||| |||||||||    
T  39981426 tcctaactgttaactttaacccccaa--atgtctatggtggaccaactttaaaaatggtccaccatagatccaattaattattctaatttaaaccgtttg 39981523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 223 - 343
Target Start/End: Original strand, 30310137 - 30310258
Alignment:
Q  223 gtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatccta-a 321  Q
    ||||||||  |||||||  ||||||||||| ||||||||||||||||||    | ||| ||| |||||  |||||||||||||||||||||||||| | |    
T  30310137 gtcccttaaataatttcaagttttcatttttgtcccacaattaataaaacgtacatttgagttcctcattttttcctccgtttgccaaataaatcccaga 30310236  T
Q  322 atgttaagtttaaccccaaatg 343  Q
     ||||||  |||||||||||||    
T  30310237 ctgttaaagttaaccccaaatg 30310258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 44372884 - 44372937
Alignment:
Q  363 ttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||| ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  44372884 ttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgat 44372937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 44381740 - 44381793
Alignment:
Q  363 ttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||| ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  44381740 ttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgat 44381793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 233 - 376
Target Start/End: Complemental strand, 32256485 - 32256344
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  |||||||||||||||||| |||||||||||    | |||  ||||||||| ||||||||| |||||||||||||| | ||  ||||| |||    
T  32256485 taatttcaagttttcattttggtcccataattaataaaatgtaccttttggtccctcactttttcctccatttgccaaataaattccaaccgttaacttt 32256386  T
Q  333 aaccccaaatgatgctaaggtggatcaaccttaaaagtggtcca 376  Q
    |||  ||||||   ||| |||||| |||| ||||||||||||||    
T  32256385 aacttcaaatg--tctatggtggaccaacattaaaagtggtcca 32256344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 219 - 274
Target Start/End: Complemental strand, 24844454 - 24844399
Alignment:
Q  219 tttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatg 274  Q
    |||| |||||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  24844454 tttgatcccttatttaatttcatgttttcattttgatcctacaattaataaaaatg 24844399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 203 - 394
Target Start/End: Complemental strand, 41079954 - 41079766
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||| |||||| |||  ||||||||| | ||||||||   |||| |||||||||||||||| |||||||    |||||  |||||| | |||||||||||    
T  41079954 taggtttattatatccattggtccctcaattaatttccattttttattttggtcccacaat-aataaaacgtacgttttggtcccttatcttttcctccg 41079856  T
Q  303 tttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaatt 394  Q
    ||||| ||||||||||  |  ||||| |||||| |||||| || ||| |||||| |||| |||||||||||||| | |||| | ||||||||    
T  41079855 tttgctaaataaatccctaccgttaactttaactccaaat-at-ctatggtggaacaacattaaaagtggtccatcgtagaccttattaatt 41079766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 669351 - 669297
Alignment:
Q  362 cttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  669351 cttaagagtggtccaccatagatcctattaattttgttaatttaaaccgtttgat 669297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 243 - 328
Target Start/End: Complemental strand, 30311549 - 30311464
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaa 328  Q
    |||||||||||||||||||||||||||||    |||||||||||||||  |||| ||| ||| ||||| ||||||||  |||||||    
T  30311549 ttttcattttggtcccacaattaataaaacatacgtttaagtccctcatttttttctctgttagccaattaaatcctttatgttaa 30311464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 271
Target Start/End: Original strand, 38539667 - 38539735
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    |||||||| ||| ||||||| ||||||| ||||||||  |||||||||||||||||| || ||||||||    
T  38539667 taggcttaataggtcatttgatcccttaattaatttcaagttttcattttggtcccataaataataaaa 38539735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 41078749 - 41078821
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaa 272  Q
    ||||||||||||||||||   |||||||| | ||||||||   |||||||||||||||||||||| |||||||    
T  41078749 ttttaggcttattagatccgctggtccctcaattaatttccatttttcattttggtcccacaattgataaaaa 41078821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 6173570 - 6173455
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||||||||| ||||   |||||||| |  |||||||  ||||||||||||  |||| |||||||||||    | |||  ||||||||| ||||||||||    
T  6173570 taggcttatttgatccaatggtccctcaaataatttcaagttttcattttgtacccataattaataaaacgtacattttggtccctcactttttcctccg 6173471  T
Q  303 tttgccaaataaatcc 318  Q
    ||||||||||||||||    
T  6173470 tttgccaaataaatcc 6173455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 22039123 - 22039186
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaatt 264  Q
    |||||||||||| ||||||||| |||||||  | ||||| ||||||||||||||||||| ||||    
T  22039123 tttaggcttatttgatcatttgatcccttaacttatttcttgttttcattttggtcccataatt 22039186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 203 - 302
Target Start/End: Complemental strand, 33779204 - 33779105
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||||||||| ||||  || ||||| ||  |||||||  ||||||||||||| |||||||||||||||| |  ||||| |||||||| | ||||||||||    
T  33779204 taggcttatttgatccattagtcccctaaataatttcaagttttcattttggccccacaattaataaaactcacgttttagtccctcgctttttcctccg 33779105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 358 - 417
Target Start/End: Original strand, 43441496 - 43441555
Alignment:
Q  358 caaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||| | ||| ||||||||    
T  43441496 caaccttaagagtggtccaccataagtcctattaattattttaatgtaaactgtttgata 43441555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 11344533 - 11344614
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    |||||||  ||||||||||||||||||||||||||||||    ||||||||||| |||   ||| ||||||||| ||||||||||    
T  11344533 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccttca---ttttctccgtttgtcaaataaatc 11344614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 47456494 - 47456381
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||| ||||   |||||||| |  |||||||  ||||||||||||||||||||||||||||||    | |||  ||||||||  ||||| || ||    
T  47456494 aggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtactttttggtccctcattttttcttctgt 47456395  T
Q  304 ttgccaaataaatc 317  Q
    ||||||||||||||    
T  47456394 ttgccaaataaatc 47456381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 35664404 - 35664332
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaa 272  Q
    ||||||||||||||||||  ||| ||||||| ||||||||   ||||||||||| ||||| || |||||||||    
T  35664404 ttttaggcttattagatccattgatcccttaattaatttccatttttcattttgatcccataagtaataaaaa 35664332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 534165 - 534114
Alignment:
Q  224 tcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatgg 275  Q
    ||||||| |||||||| | |||||||||||||| |||| |||||||||||||    
T  534165 tcccttaattaatttcatcttttcattttggtctcacatttaataaaaatgg 534114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 537331 - 537382
Alignment:
Q  224 tcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatgg 275  Q
    ||||||| |||||||| | |||||||||||||| |||| |||||||||||||    
T  537331 tcccttaattaatttcatcttttcattttggtctcacatttaataaaaatgg 537382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 25533197 - 25533252
Alignment:
Q  216 tcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    |||||||||| |||| ||||||||  |||||||||||||||||| || ||||||||    
T  25533197 tcatttggtctcttaattaatttcaagttttcattttggtcccataactaataaaa 25533252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 271
Target Start/End: Original strand, 30333298 - 30333349
Alignment:
Q  220 ttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    |||||||| ||  |||||||  ||||||||||||||||||||||||||||||    
T  30333298 ttggtcccctaaataatttcaagttttcattttggtcccacaattaataaaa 30333349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 30334755 - 30334689
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    |||||| ||||||  |||||||| ||  |||||||  ||||||||||| ||||||||||||||||||    
T  30334755 ggcttaatagatccattggtcccctaactaatttcaagttttcattttagtcccacaattaataaaa 30334689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 4167603 - 4167656
Alignment:
Q  363 ttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||| ||||||||||||||||| |||||| | ||| |||||||||| ||||||    
T  4167603 ttaaaggtggtccaccatagatcttattaaatttttaaatttcaaccttttgat 4167656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 316
Target Start/End: Original strand, 5095104 - 5095193
Alignment:
Q  227 cttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    |||||||||||   || ||| ||||||||| |||||||||||||| |  ||||| ||||| |||| ||| || | |||||||||||||||    
T  5095104 cttatttaattctttggttttattttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 5095193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 171; Significance: 2e-91; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 203 - 416
Target Start/End: Original strand, 29219381 - 29219595
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29219381 taggcttattagatcgtttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccg 29219480  T
Q  303 tttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaa 401  Q
    |||||||||||||||| || |||||||||||||||||||||||| ||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  29219481 tttgccaaataaatcccaactgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaa 29219580  T
Q  402 tttcaaccgtttgat 416  Q
    |||||||||||||||    
T  29219581 tttcaaccgtttgat 29219595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 203 - 416
Target Start/End: Original strand, 29332680 - 29332894
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29332680 taggcttattagatcgtttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcctccg 29332779  T
Q  303 tttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaa 401  Q
    |||||||||||||||| || |||||||||||||||||||||||| ||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  29332780 tttgccaaataaatcccaactgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaa 29332879  T
Q  402 tttcaaccgtttgat 416  Q
    |||||||||||||||    
T  29332880 tttcaaccgtttgat 29332894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 200 - 416
Target Start/End: Complemental strand, 18617129 - 18616912
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18617129 ttttaggcttattagatcatttggtcctttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcaccttttcct 18617030  T
Q  300 ccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattt 398  Q
    ||||||||||||||||||| || | |||||||||||||||||||||| ||| |||||| ||  |||||||||||||||||||||||||||||||||||||    
T  18617029 ccgtttgccaaataaatcccaactattaagtttaaccccaaatgatgtctatggtggaccagtcttaaaagtggtccaccatagatcctattaattattt 18616930  T
Q  399 taatttcaaccgtttgat 416  Q
    ||||||||||||||||||    
T  18616929 taatttcaaccgtttgat 18616912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 205 - 513
Target Start/End: Complemental strand, 1085504 - 1085199
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| ||||||||  ||||||||  ||||||||||||    
T  1085504 ggcttattagattgtttggtcccttatttaatttcatgttttcattttggtaccacatttaataaaattggcgttttggtccctca--ttttcctccgtt 1085407  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
    |||||||||||||  ||  |||||||||||    ||||||||  || ||||||||| | |||| |||||| |||||||||||||||||||||||||||||    
T  1085406 tgccaaataaatcacaaccgttaagtttaa-taaaaatgatgtttatggtggatcatctttaagagtggtacaccatagatcctattaattattttaatt 1085308  T
Q  404 tcaaccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttc 503  Q
    || ||||||||||           |||||| ||| ||| ||||| ||| || |||||||||||||  |  |||| |||||| ||||||  ||||||||||    
T  1085307 tcgaccgtttgattttttaaaaaaaaaagagaacaattggattaagcaggtttattttatcttacgatgtaccaccaacacctaattt-tttttcttttc 1085209  T
Q  504 ttcatcttct 513  Q
    ||||||||||    
T  1085208 ttcatcttct 1085199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 205 - 416
Target Start/End: Original strand, 17459251 - 17459463
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    |||||||| ||||  || ||||||||  |||||||  ||||||||||||||| ||||||||||||||    |||||||||||||||| ||||||||||||    
T  17459251 ggcttatttgatccattagtcccttaaataatttcaagttttcattttggtcacacaattaataaaacgtacgtttaagtccctcactttttcctccgtt 17459350  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
    |||||||||||| || | | |||||||||||||||||||||| ||| ||||||  || |||||||||| || | |||||||||||||||||||| |||||    
T  17459351 tgccaaataaattctgacttttaagtttaaccccaaatgatgtctatggtggacgaatcttaaaagtgatctaacatagatcctattaattattataatt 17459450  T
Q  404 tcaaccgtttgat 416  Q
    | |||||||||||    
T  17459451 taaaccgtttgat 17459463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 200 - 374
Target Start/End: Original strand, 1082981 - 1083153
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    |||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| ||||  |||| ||| ||||| ||    
T  1082981 ttttaggcttattatatcgtttggtcccttatttaatttcatattttcattttggtcccacatttaataaaaatggtgttttggtccgtcatctttttct 1083080  T
Q  300 ccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtc 374  Q
    ||||||||||| ||||||| || |||||| |||||| | |||| || ||| ||||||||||||||||||||||||    
T  1083081 ccgtttgccaattaaatcccaagtgttaactttaactctaaat-at-ctatggtggatcaaccttaaaagtggtc 1083153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 224 - 409
Target Start/End: Original strand, 43033099 - 43033282
Alignment:
Q  224 tcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaat 323  Q
    |||||||  |||||||  ||||||||||||||||||||||||||||||    | |||  ||||||||| |||||||||||||||||||||||||||  ||    
T  43033099 tcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcctcgat 43033198  T
Q  324 gttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaacc 409  Q
    ||||||||||||| ||||||   ||| ||| || ||||||||| |||||||||||||| | |||||||||||||||||||| ||||    
T  43033199 gttaagtttaacctcaaatg--tctatggtagaccaaccttaagagtggtccaccataaaccctattaattattttaatttaaacc 43033282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 203 - 318
Target Start/End: Original strand, 6030601 - 6030716
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| ||| ||| |  ||||||||||    
T  6030601 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaattggcgttttagttccttattttttcctccg 6030700  T
Q  303 tttgccaaataaatcc 318  Q
    ||||||||||||||||    
T  6030701 tttgccaaataaatcc 6030716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 34468957 - 34469068
Alignment:
Q  206 gcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgttt 305  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||||| ||||| || ||||    
T  34468957 gcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcgcacaattaataaaaatgacgttttagtccctcacattttcttctgttt 34469056  T
Q  306 gccaaataaatc 317  Q
    ||||||||||||    
T  34469057 gccaaataaatc 34469068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 201 - 318
Target Start/End: Original strand, 18615510 - 18615627
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctc 300  Q
    |||| |||||||||||| ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| ||| ||||||  || ||||||||    
T  18615510 tttatgcttattagatcgtttggtcccttatttaatttcatattttcattttggtctcacaattaataaaaatggctttttagtcccctacattttcctc 18615609  T
Q  301 cgtttgccaaataaatcc 318  Q
    ||||||||||||||||||    
T  18615610 cgtttgccaaataaatcc 18615627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 29220994 - 29220881
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||| |||    
T  29220994 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcctctgtt 29220895  T
Q  305 tgccaaataaatcc 318  Q
    |||||||| |||||    
T  29220894 tgccaaattaatcc 29220881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 29334293 - 29334180
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||| |||    
T  29334293 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacaattaataaaaatggctttttagtcccttacattttcctctgtt 29334194  T
Q  305 tgccaaataaatcc 318  Q
    |||||||| |||||    
T  29334193 tgccaaattaatcc 29334180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 44192569 - 44192453
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    |||| ||||||||||||  ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| ||| |||||||||| |||||||    
T  44192569 ttttcggcttattagattgtttggtcccttatttaatttcatgttttcattttgatcccaaaattaataaaaatggcattttagtccctcacattttcct 44192470  T
Q  300 ccgtttgccaaataaat 316  Q
    ||||||| |||||||||    
T  44192469 ccgtttgtcaaataaat 44192453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 220 - 394
Target Start/End: Original strand, 11315946 - 11316118
Alignment:
Q  220 ttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcct 319  Q
    |||||||| ||  |||||||  ||||||||||||||||||||||||||||||    |||||||||||||||  ||||||||||||||||||||||||||     
T  11315946 ttggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtttgccaaataaatccc 11316045  T
Q  320 aaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaatt 394  Q
       ||||||||||||  |||||||   ||| |||||||||||||||||| ||||||||| |||| | ||||||||    
T  11316046 ggctgttaagtttaattccaaatg--tctatggtggatcaaccttaaaaatggtccaccgtagaccttattaatt 11316118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 243 - 414
Target Start/End: Complemental strand, 11317448 - 11317277
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    |||||||||||||||||||||||||||||      |||  ||||||||  |||||||||||||| |||||||||||| |  |||||||||||| | ||||    
T  11317448 ttttcattttggtcccacaattaataaaacatatattttggtccctcaatttttcctccgtttggcaaataaatcctcacagttaagtttaactc-aaat 11317350  T
Q  343 gatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttg 414  Q
    |||| ||| ||| || ||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||    
T  11317349 gatgtctatggtagaccaaccttaagagtggtctaccatagatcctattaattattttaatttaaatcgtttg 11317277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 205 - 318
Target Start/End: Original strand, 44191134 - 44191247
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||| |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || ||| ||||||||| | ||||| | |||    
T  44191134 ggcttataagattatttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaaattgcattttagtccctcatcgtttccactgtt 44191233  T
Q  305 tgccaaataaatcc 318  Q
    || |||||||||||    
T  44191234 tgtcaaataaatcc 44191247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 200 - 409
Target Start/End: Complemental strand, 32470698 - 32470491
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    |||| |||||||| ||||  || ||||| ||  |||||||  ||||| ||||||||||||||||||||||||    ||||||||| |||||  |||||||    
T  32470698 tttttggcttatttgatccattagtcccctaaataatttcaagtttttattttggtcccacaattaataaaacgtacgtttaagttcctcatgttttcct 32470599  T
Q  300 ccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttt 399  Q
    ||||||| |||||||||||    ||||||||||||| |||||||   ||| ||||||| |||||||||| ||||||| | |||| | |||||||| | ||    
T  32470598 ccgtttgtcaaataaatcccggctgttaagtttaactccaaatg--tctatggtggataaaccttaaaaatggtccatcgtagaccttattaattttgtt 32470501  T
Q  400 aatttcaacc 409  Q
    ||||| ||||    
T  32470500 aattttaacc 32470491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 205 - 318
Target Start/End: Complemental strand, 6032432 - 6032319
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| |||| ||| ||||| |||||| |||||| |||||||| ||||||||||||||||||| |||| ||||||  |  |||||||| |||    
T  6032432 ggcttattagatcgtttgatcctttattcaatttcatgtttttattttggttccacaattaataaaaatggtgttttagtcccgtattttttcctctgtt 6032333  T
Q  305 tgccaaataaatcc 318  Q
    ||||||||||||||    
T  6032332 tgccaaataaatcc 6032319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 220 - 416
Target Start/End: Original strand, 11547672 - 11547868
Alignment:
Q  220 ttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcct 319  Q
    ||||||| |||  |||||||  ||||||||||||||| || |||||||||||     |||| |  ||||||  ||||||| |||||| ||||||||||||    
T  11547672 ttggtcctttaaataatttcaagttttcattttggtctcataattaataaaacacatgttttaacccctcattttttccttcgtttgtcaaataaatcct 11547771  T
Q  320 aaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
     | |||||||||||||||||||||||| |||   |||| ||||||||  |||||||||||||||||| |||||| | || |||||| |||||||||||    
T  11547772 gactgttaagtttaaccccaaatgatgtctatcatggaccaaccttaggagtggtccaccatagatcgtattaaat-ttataatttaaaccgtttgat 11547868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 233 - 417
Target Start/End: Original strand, 32469174 - 32469359
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatgg--cgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagt 330  Q
    |||||||  |||||||||||| |||||||||||||||||   |  | |||  |||| |||| |||||||||||| |||||||||||||| |  |||||||    
T  32469174 taatttcaagttttcattttgatcccacaattaataaaacgtgtaccttttggtccttcactttttcctccgtt-gccaaataaatccttatagttaagt 32469272  T
Q  331 ttaaccccaaatgatgc-taaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
    ||||| | |||| |||  || |||||| |||| |||| |||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  32469273 ttaactc-aaattatgtatatggtggaccaactttaagagtggtccactatagatcctattaattattttaatttaaaccctttgata 32469359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 242 - 416
Target Start/End: Complemental strand, 6030551 - 6030377
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaa 341  Q
    |||||||||||| ||||||||||||| ||||   |||||   ||| |||  ||||||||  |||||||||||||||  ||  ||||| |||||||| |||    
T  6030551 gttttcattttgatcccacaattaattaaaagtacgttttgatccttcatattttcctctatttgccaaataaatctcaacagttaactttaaccc-aaa 6030453  T
Q  342 tgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||| ||| |||||| ||||||||| |||| || ||||||||||||||||||  ||||||||| |||||||||||    
T  6030452 tgatgtctacggtggaccaaccttaagagtgatctaccatagatcctattaatatttttaatttaaaccgtttgat 6030377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 299 - 416
Target Start/End: Complemental strand, 42641885 - 42641768
Alignment:
Q  299 tccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatt 397  Q
    ||||||||||||||||||||| |   ||||||| ||||| |||||||| ||| |||||  ||||||||| ||||||| ||||||||||||||||||||||    
T  42641885 tccgtttgccaaataaatcctcacaattaagttcaaccc-aaatgatgtctatggtgggccaaccttaagagtggtctaccatagatcctattaattatt 42641787  T
Q  398 ttaatttcaaccgtttgat 416  Q
    ||||||| ||| |||||||    
T  42641786 ttaatttaaactgtttgat 42641768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 203 - 385
Target Start/End: Complemental strand, 12359799 - 12359618
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||||  | ||||||||  ||||||| ||||||| |||| |||||||||||||||||| ||||||||  ||||||||  |||||||  |    
T  12359799 taggcttattagatcaccttgtcccttaaataatttcatgttttcgttttagtcccacaattaataaaattggcgttttggtccctcattttttcctttg 12359700  T
Q  303 tttgccaaataaatcc-taaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatc 385  Q
    || ||||||||||||| ||  |||||| |||||||  || ||   ||| |||||||||| | ||| |||| |||||||||||||    
T  12359699 ttcgccaaataaatccgtagctgttaactttaaccttaagtg--tctatggtggatcaatcgtaagagtgatccaccatagatc 12359618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 233 - 394
Target Start/End: Complemental strand, 43034561 - 43034400
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  |||||||||||  || ||||||||||||||    | |||  ||||||||| |||||||||||||| |||||||||| |   ||||||||||    
T  43034561 taatttcaagttttcattttaatctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgtcaaataaatcttcgctgttaagttt 43034462  T
Q  333 aacccc--aaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaatt 394  Q
    |||| |  |||||   ||| ||||||||||| |||| |||||||||||||||||||||||||||    
T  43034461 aacctctcaaatgt--ctatggtggatcaactttaagagtggtccaccatagatcctattaatt 43034400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 200 - 319
Target Start/End: Original strand, 249017 - 249136
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    |||| ||||||||||||||||||||||||||  | ||||| | ||||||||||||||||| | |||||||||||| ||  |  ||||||||  |||| ||    
T  249017 tttttggcttattagatcatttggtcccttaagttatttcttattttcattttggtcccatatttaataaaaatgtcgaattggtccctcaaattttgct 249116  T
Q  300 ccgtttgccaaataaatcct 319  Q
    | |||||||||| |||||||    
T  249117 ctgtttgccaaaaaaatcct 249136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 205 - 416
Target Start/End: Original strand, 35903506 - 35903715
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    |||||| ||| ||||||||||| ||| ||||||||  |||||||||||||||||| || |||||||| |   ||||  ||||||||  | |  ||||||     
T  35903506 ggcttaataggtcatttggtcctttaattaatttcaagttttcattttggtcccataactaataaaagtcatgttttggtccctcaattatatctccgtc 35903605  T
Q  305 tgccaaataaatcctaaa-tgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
     | ||||||||||||    |||||||||||||||||||||   ||| | | ||| | | || | ||||||||||||||||||||||||| ||||||||||    
T  35903606 agtcaaataaatccttggctgttaagtttaaccccaaatgt--ctatgatagatta-cttttagagtggtccaccatagatcctattaaatattttaatt 35903702  T
Q  404 tcaaccgtttgat 416  Q
    | |||||||||||    
T  35903703 taaaccgtttgat 35903715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 444 - 554
Target Start/End: Complemental strand, 7753408 - 7753297
Alignment:
Q  444 attatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttcttcc-tccctcacttcataattcaacatcac 542  Q
    ||||||| | |||| ||||||||||  | || ||||||||| |||||| |||| ||||||||||||||||||| ||||   ||||||||||||||| |||    
T  7753408 attatgcgaatctagtttatcttacaatgaatcaacaacacctaattttatttccttttcttcatcttcttccttccccttcttcataattcaacaacac 7753309  T
Q  543 cttcttcatcac 554  Q
    |||| |||||||    
T  7753308 cttcatcatcac 7753297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 28562889 - 28562790
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    ||||||||||||||||| |||||||||||    | |||  ||||||||| |||||||||||||| |||||||||||  | |||||||||||| |||||||    
T  28562889 ttttcattttggtcccataattaataaaacataccttttggtccctcactttttcctccgtttgtcaaataaatccagactgttaagtttaatcccaaat 28562790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 202 - 416
Target Start/End: Complemental strand, 34513674 - 34513461
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    ||||||||| ||| |||||||||||| || |||||| |   ||||||||||||| ||| ||||||||||| |   ||||| ||| |||   ||| |||||    
T  34513674 ttaggcttaataggtcatttggtcccctaattaattaccaattttcattttggttccataattaataaaactcatgtttaggtctctcgggtttgcctcc 34513575  T
Q  302 gtttgccaaataaatcctaaat-gttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttta 400  Q
    ||| | ||||||| |||    | |||||| |||||||||||||    || ||| || ||||||||| |||| ||||||||||| | |||||||| |||||    
T  34513574 gttagtcaaataattccctggtcgttaagcttaaccccaaatgta--tatggttgaccaaccttaagagtgatccaccatagaccttattaattttttta 34513477  T
Q  401 atttcaaccgtttgat 416  Q
    |||| |||||||||||    
T  34513476 atttaaaccgtttgat 34513461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 358 - 416
Target Start/End: Complemental strand, 4921024 - 4920966
Alignment:
Q  358 caaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||| |||||| |||||||||||| ||||||||||||||| |||||| |||||||||||    
T  4921024 caactttaaaaatggtccaccataaatcctattaattattctaatttaaaccgtttgat 4920966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 232 - 318
Target Start/End: Complemental strand, 17460775 - 17460689
Alignment:
Q  232 ttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    ||||||||  |||||||||||| |||||||||||||||||    |||||  ||||||||  ||||||||||||| ||||||||||||    
T  17460775 ttaatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttcccaaataaatcc 17460689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 351 - 416
Target Start/End: Original strand, 8320900 - 8320965
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| || |||||| || ||||||||||||||  |||||||||||||||||| |||||||||||    
T  8320900 ggtggaccatccttaagagcggtccaccatagattatattaattattttaatttaaaccgtttgat 8320965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 7437851 - 7437747
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  ||||||||||||||||||||||||||||||      |||  ||||||||  ||||||||||||| | |||||||||||||   ||||||||    
T  7437851 taatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgtttacaaaataaatcctaacaattaagttt 7437752  T
Q  333 aaccc 337  Q
    |||||    
T  7437751 aaccc 7437747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 404
Target Start/End: Original strand, 34512825 - 34513008
Alignment:
Q  218 atttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    |||||||||| || |||||| |  |||||||||||||||||| ||||||||||| |   ||||   |||||||  ||| |||||||| | ||||||||||    
T  34512825 atttggtcccctaattaattaccagttttcattttggtcccataattaataaaactcatgttttgatccctcaaatttgcctccgttagtcaaataaatc 34512924  T
Q  318 ctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 404  Q
     | | ||||||||||||||  ||   |   || |||||||||||| ||| |||||||||||||| | | |||||| | |||||||||    
T  34512925 atgactgttaagtttaaccttaatgta---tatggtggatcaaccataagagtggtccaccatataccttattaaattttttaattt 34513008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 28611213 - 28611161
Alignment:
Q  363 ttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| |||||||| ||||||||||||||||| |||||||| |||||||||||    
T  28611213 ttaaaaatggtccactatagatcctattaatta-tttaatttaaaccgtttgat 28611161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 351 - 391
Target Start/End: Complemental strand, 16295190 - 16295150
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctatta 391  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  16295190 ggtggaccaaccttaacagtggtccaccatagatcctatta 16295150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 102475 - 102420
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtccca 259  Q
    ||||||| | |||||||||||||| ||  ||||||| |||||||||||||||||||    
T  102475 aggcttaattgatcatttggtcccctaactaatttcttgttttcattttggtccca 102420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 438 - 512
Target Start/End: Original strand, 102229 - 102303
Alignment:
Q  438 cattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttc 512  Q
    |||| |||||||||  |||| |||||||||| || |||||||||||| |||||| ||||  || |||||||||||    
T  102229 cattggattatgcatatctactttatcttacggtgaaccaacaacacctaattttatttctttatcttcatcttc 102303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 271890 - 271824
Alignment:
Q  208 ttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatg 274  Q
    |||||||||||||| ||||||||  | ||||| | ||||||||||||| ||| | ||||||||||||    
T  271890 ttattagatcatttagtcccttaagttatttcttattttcattttggttccatatttaataaaaatg 271824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 293 - 343
Target Start/End: Original strand, 7436552 - 7436602
Alignment:
Q  293 ttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaatg 343  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||||||||    
T  7436552 ttttcttccgtttgtcaaataaatcctaacagttaagtctaaccccaaatg 7436602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 34147130 - 34147200
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    |||||||||| ||| ||||||||||||| |  ||||||   |||||||||||||||||| || ||||||||    
T  34147130 tttaggcttaataggtcatttggtccctcaaataattttcagttttcattttggtcccataagtaataaaa 34147200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 376 - 413
Target Start/End: Complemental strand, 16290742 - 16290705
Alignment:
Q  376 accatagatcctattaattattttaatttcaaccgttt 413  Q
    ||||||||||||||||||||||||||||| || |||||    
T  16290742 accatagatcctattaattattttaatttaaatcgttt 16290705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 359 - 404
Target Start/End: Original strand, 30748630 - 30748675
Alignment:
Q  359 aaccttaaaagtggtccaccatagatcctattaattattttaattt 404  Q
    |||||||| |||||  ||||||||||| ||||||||||||||||||    
T  30748630 aaccttaagagtggcacaccatagatcatattaattattttaattt 30748675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 35061434 - 35061381
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcc 257  Q
    ||||||| ||| ||||||||||||||| |||||||   ||||||||||||||||    
T  35061434 aggcttaataggtcatttggtcccttaattaatttgaagttttcattttggtcc 35061381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 316
Target Start/End: Original strand, 40322971 - 40323060
Alignment:
Q  227 cttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    |||||||||||   || ||| ||||||||| |||||||||||||| |  ||||| ||||| |||| ||| || | |||||||||||||||    
T  40322971 cttatttaattctttggttttattttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 40323060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 3e-75; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 201 - 415
Target Start/End: Original strand, 30910735 - 30910950
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctc 300  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  30910735 tttaggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctc 30910834  T
Q  301 cgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttt 399  Q
     |||| |||||||||||   | |||||| |||||| |||||||||| ||  |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  30910835 tgtttaccaaataaatctcgactgttaactttaacaccaaatgatgtctttggtggaccaaccttaagagtggtccaccatagatcctattaattatttt 30910934  T
Q  400 aatttcaaccgtttga 415  Q
    ||||||||||||||||    
T  30910935 aatttcaaccgtttga 30910950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 233 - 513
Target Start/End: Complemental strand, 30859262 - 30858983
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  ||||||||||||||||||||||||||||||    |||||||||||||||| |||||||| ||||||||||||| || | |  |||||||||    
T  30859262 taatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcacattttcctctgtttgccaaataagtcttgaccgttaagttt 30859163  T
Q  333 aaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatannnnnnnnnnaaaa 431  Q
    |||||||||||||| ||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||           ||||    
T  30859162 aaccccaaatgatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgat-tttctttttaaaaa 30859064  T
Q  432 gataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttct 513  Q
    || ||||||| |||||  |||||||||||||||||||  || |||| |||||| ||||||  ||| ||||||||||||||||    
T  30859063 gagaaccattggattagacaagtctattttatcttacaatataccaccaacacctaattt-ttttccttttcttcatcttct 30858983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 205 - 403
Target Start/End: Complemental strand, 30912280 - 30912084
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||    
T  30912280 ggcttattagatcgtttagtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccctcacctttttctccgtt 30912181  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
    |||||||||||||| || |||||| |||||| |||||| || ||| |||||| |||||||||||||||| || |||||| | |||||||| | ||||||    
T  30912180 tgccaaataaatcccaagtgttaactttaactccaaat-at-ctatggtggaccaaccttaaaagtggtacatcatagaccttattaattttgttaatt 30912084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 203 - 416
Target Start/End: Complemental strand, 33174080 - 33173867
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| |    
T  33174080 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacatttaataaaaatggcgttttagtccctcaccttttcctctg 33173981  T
Q  303 tttgccaaataaatcctaaa-tgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttt-a 400  Q
    |||||||||||||||||    |||||||||||||||||||||   ||| |||||| ||||||||| ||||||| ||||||||    ||||||| |||| |    
T  33173980 tttgccaaataaatccttggctgttaagtttaaccccaaatg--tctatggtggaccaaccttaagagtggtctaccatagacttcattaatttttttaa 33173883  T
Q  401 atttcaaccgtttgat 416  Q
    |||| |||||||||||    
T  33173882 attttaaccgtttgat 33173867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 204 - 416
Target Start/End: Original strand, 22047729 - 22047942
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||| ||||   |||||||||| ||||||||  ||||||||||||||||||||||||||||||    |||||  ||||||||  |||||||||||    
T  22047729 aggcttatttgatccaatggtcccttaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcattttttcctccgt 22047828  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 402  Q
    ||||||||||||||||   ||||||||||||| | |||||||| ||| |||||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  22047829 ttgccaaataaatcctggctgttaagtttaactctaaatgatgtctatggtggatcaaccttaagagtggtccaccataaatcctatgaattattttaat 22047928  T
Q  403 ttcaaccgtttgat 416  Q
    || |||||||||||    
T  22047929 ttaaaccgtttgat 22047942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 233 - 416
Target Start/End: Original strand, 39603879 - 39604063
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  |||||||||||| |||||||||||||||||    |||||  ||||||||  ||||||||||||||||||||||||| | | ||||||||||    
T  39603879 taatttcaagttttcattttgatcccacaattaataaaacgtacgttttggtccctcaaattttcctccgtttgccaaataaatcatgactgttaagttt 39603978  T
Q  333 aaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||||||||||| ||| ||| || |||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||    
T  39603979 aaccccaaatgatgtctatggtagaccaaccttaaaagtgatccaccatagatcctattaattattttaatttaaactgtttgat 39604063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 201 - 416
Target Start/End: Complemental strand, 22308921 - 22308707
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctc 300  Q
    ||||||||||||||||| ||||||||| ||  ||||||| ||||||||||||||||||| |||||||||||  ||||||| |||||||||| |||| |||    
T  22308921 tttaggcttattagatcgtttggtcccctaaataatttcatgttttcattttggtcccataattaataaaacaggcgttttagtccctcacattttgctc 22308822  T
Q  301 cgtttgccaaataaatcc-taaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttt 399  Q
    |||||||||||||||||| |   |||||||||||||||||||||   ||| |||||| | ||||||| ||||||||||||||||   |||||| | ||||    
T  22308821 cgtttgccaaataaatccatggttgttaagtttaaccccaaatg--tctatggtggacctaccttaagagtggtccaccatagacattattaaatttttt 22308724  T
Q  400 aatttcaaccgtttgat 416  Q
    ||| | |||| ||||||    
T  22308723 aatgtaaaccatttgat 22308707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 203 - 416
Target Start/End: Complemental strand, 1010484 - 1010274
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||||||| ||| ||||||||||||||| ||||||||  ||||| |||||||||||| || |||||||| |   ||||  ||||||||| |||  |||||    
T  1010484 taggcttaataggtcatttggtcccttaattaatttcaagtttttattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccg 1010385  T
Q  303 tttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 402  Q
    |  | |||||||||||  |  ||||| |||||||||||||| || || |||||| ||||||||| |||||||| ||||||||||||||||||| ||||||    
T  1010384 tcagtcaaataaatcccgacggttaactttaaccccaaatg-tg-tatggtggaccaaccttaagagtggtccgccatagatcctattaatta-tttaat 1010288  T
Q  403 ttcaaccgtttgat 416  Q
    ||||||| ||||||    
T  1010287 ttcaaccctttgat 1010274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 207 - 416
Target Start/End: Original strand, 8521255 - 8521461
Alignment:
Q  207 cttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttg 306  Q
    |||| ||| ||||||||||||||| ||||||||  |||||||||||||||||| || |||||||| |   ||||  ||||||||| |||  ||||||  |    
T  8521255 cttaataggtcatttggtcccttaattaatttcaagttttcattttggtcccataactaataaaactcatgttttggtccctcacgtttgtctccgtcag 8521354  T
Q  307 ccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttca 406  Q
     |||||||||||  |  ||||| |||||||||||||| || || |||||| ||||||||| | |||||||||||||||||||||||||| ||||||||||    
T  8521355 tcaaataaatcccgacggttaactttaaccccaaatg-tg-tatggtggaccaaccttaagaatggtccaccatagatcctattaatta-tttaatttca 8521451  T
Q  407 accgtttgat 416  Q
    ||| ||||||    
T  8521452 accctttgat 8521461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 233 - 417
Target Start/End: Complemental strand, 27705406 - 27705222
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  |||||||||||||||  |||||||||||||    |||||  ||||||||  ||||||||| |||||||||||||| |  |  ||||| |||    
T  27705406 taatttcaagttttcattttggtcatacaattaataaaacgtacgttttggtccctcagattttcctccttttgccaaataaatacagacagttaacttt 27705307  T
Q  333 aaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
    ||  |||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  27705306 aa-tccaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaatatttttaatttaaaccgtttgata 27705222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 204 - 416
Target Start/End: Complemental strand, 325304 - 325094
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||| ||||   |||||||| |  |||||||  ||||||||||||||||||||||||||||||    | |||  ||||||||  |||||||||||    
T  325304 aggcttatttgatctaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaagttttcctccgt 325205  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
    |||||||||||||||  | |||||| |||||| | |||||   ||| |||||| ||||||||| ||||||||| | |||| | |||||||| | ||||||    
T  325204 ttgccaaataaatcccgactgttaactttaactctaaatgt--ctatggtggaccaaccttaatagtggtccatcgtagaccttattaattttgttaatt 325107  T
Q  404 tcaaccgtttgat 416  Q
    | |||||||||||    
T  325106 ttaaccgtttgat 325094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 324 - 416
Target Start/End: Original strand, 11262509 - 11262601
Alignment:
Q  324 gttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||| || |||||||||| |||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |||||| |||| ||||||    
T  11262509 gttaacttcaaccccaaatcatgctatggtggaccaaccttaagagtggtccaccatagatcctattaattattataatttaaaccatttgat 11262601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 444 - 545
Target Start/End: Complemental strand, 20539227 - 20539122
Alignment:
Q  444 attatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatctt---cttcctccc-tcacttcataattcaacat 539  Q
    ||||||||||||||||||||||||| |||||| |||||||| |||||| |||| |||||| |||||||   ||||||||| | |||||||||||||||||    
T  20539227 attatgcaagtctattttatcttacagtaaacaaacaacacctaattttatttccttttcatcatcttcttcttcctccctttacttcataattcaacat 20539128  T
Q  540 cacctt 545  Q
    ||||||    
T  20539127 cacctt 20539122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 323 - 518
Target Start/End: Original strand, 1102735 - 1102926
Alignment:
Q  323 tgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatannnnn 422  Q
    |||||| ||||||||||||||   ||| ||| || ||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||          
T  1102735 tgttaactttaaccccaaatgt--ctatggtagaccaaccttaagagtggtccaccatagatcttattaattattttaatttaaaccgtttgat--cttt 1102830  T
Q  423 nnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttcttcctc 518  Q
         ||| ||| |||| | |||||||||||| ||||||||||||| || |  ||| ||||  ||||| | ||||| |||||||||||||||||||    
T  1102831 tttttaaatgatgaccagtggattatgcaagtgtattttatcttacggtgagtcaataacagctaattaatttttcctttcttcatcttcttcctc 1102926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 200 - 318
Target Start/End: Original strand, 22307501 - 22307619
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    |||| ||||||||||||| ||||||||| ||   |||||| ||||||||||||||| ||| |||||||||||  || |||| |||||||||| |||| ||    
T  22307501 tttttggcttattagatcgtttggtcccctaaacaatttcatgttttcattttggttccataattaataaaacaggtgttttagtccctcactttttgct 22307600  T
Q  300 ccgtttgccaaataaatcc 318  Q
    | |||||||||||||||||    
T  22307601 ctgtttgccaaataaatcc 22307619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 293 - 416
Target Start/End: Original strand, 15548323 - 15548451
Alignment:
Q  293 ttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctatta 391  Q
    |||||||||||||||||||||||||||   ||||||||||||||| |||||||| ||  |||||| ||||||||| | || ||||||||| |||||||||    
T  15548323 ttttcctccgtttgccaaataaatcctgcctgttaagtttaaccctaaatgatgtctctggtggaccaaccttaagaatgatccaccataaatcctatta 15548422  T
Q  392 ----attattttaatttcaaccgtttgat 416  Q
        ||||||||||||| |||| ||||||    
T  15548423 attaattattttaatttaaaccatttgat 15548451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 232 - 319
Target Start/End: Complemental strand, 39605560 - 39605473
Alignment:
Q  232 ttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcct 319  Q
    ||||||||  ||||||||||||||||||||||||||||||    |||||  ||||||||  |||||||||||||||||||||||||||    
T  39605560 ttaatttcaagttttcattttggtcccacaattaataaaacatacgttttggtccctcagattttcctccgtttgccaaataaatcct 39605473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 233 - 343
Target Start/End: Complemental strand, 22049226 - 22049116
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  |||||||||||||||||| |||||||||||    |||||  ||||||||| |||||||| ||||| |||||||||||    ||||||||||    
T  22049226 taatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctgtttggcaaataaatccctgctgttaagttt 22049127  T
Q  333 aaccccaaatg 343  Q
    |||||||||||    
T  22049126 aaccccaaatg 22049116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 416
Target Start/End: Complemental strand, 4127222 - 4127161
Alignment:
Q  355 gatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| |||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||    
T  4127222 gatcaatcttaaaagtggtccaccatagatcctgttaattaatttaatttaaaccatttgat 4127161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 318 - 512
Target Start/End: Complemental strand, 36898985 - 36898791
Alignment:
Q  318 ctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
    ||||||||||| ||||||| |||||  |  || |||||  ||||||||||||| ||||||||||||| || |||||||||||| ||| |||| ||||||     
T  36898985 ctaaatgttaactttaacctcaaatatt--tatggtggcccaaccttaaaagtagtccaccatagattctgttaattattttagtttaaaccctttgatt 36898888  T
Q  418 nnnnnnnnnn--aaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttc 512  Q
                ||||||| |||||| ||||| ||| ||||||||||||||||  |  |||| |||||| ||||||  |||||||||||||||||||    
T  36898887 tttttttcttctaaaagatgaccattggattacgcatgtctattttatcttacgatgtaccaccaacacctaatttttttttcttttcttcatcttc 36898791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 351 - 398
Target Start/End: Original strand, 1009328 - 1009375
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattt 398  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||    
T  1009328 ggtggaccaaccttaagagtggtccaccatagatcctattaattattt 1009375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 8523865 - 8523798
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    ||||||| ||| |||||||||||| || ||||||||  |||||||||||||||||| || ||||||||    
T  8523865 aggcttaataggtcatttggtcccctaattaatttcaagttttcattttggtcccataactaataaaa 8523798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 9169584 - 9169650
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    |||||| ||| |||||||| |||||| ||||||||  ||||||||||| |||||| |||||||||||    
T  9169584 ggcttaataggtcatttggccccttaattaatttcaagttttcattttagtcccataattaataaaa 9169650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 272
Target Start/End: Original strand, 34894144 - 34894214
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaa 272  Q
    ||||||||||||||||  ||||||||||| ||||||||   ||||||||||||||||  || |||||||||    
T  34894144 ttaggcttattagatccattggtcccttaattaatttccatttttcattttggtcccgtaagtaataaaaa 34894214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 272
Target Start/End: Complemental strand, 34899072 - 34899002
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaa 272  Q
    ||||||||||||||||  ||||||||||| |||||||    ||||||||||||||||| || |||||||||    
T  34899072 ttaggcttattagatccattggtcccttaattaattttcatttttcattttggtcccataagtaataaaaa 34899002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 416
Target Start/End: Original strand, 10735906 - 10735971
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| |||| |||| ||  |||||||||||||| |||||||||||||||||| |||||| ||||    
T  10735906 ggtggaccaacgttaacagcagtccaccatagatcatattaattattttaatttaaaccgtctgat 10735971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 428 - 517
Target Start/End: Complemental strand, 22049032 - 22048943
Alignment:
Q  428 aaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttcttcct 517  Q
    |||||| || |||| ||||| ||| |||||||||||||||| || |||||||| ||  ||||||| ||| | | ||||||||||||||||    
T  22049032 aaaagacaatcattggattacgcatgtctattttatcttacagtgaaccaacatcagctaatttattttccctctcttcatcttcttcct 22048943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 33172604 - 33172689
Alignment:
Q  258 cacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc-taaatgttaagtttaaccccaaat 342  Q
    |||| |||||||||| |  |||| ||||| |||| |||| ||||||||||||||||||||| |   ||||||||||||||||||||    
T  33172604 cacatttaataaaaaagatgttttagtccttcacatttttctccgtttgccaaataaatccatcggtgttaagtttaaccccaaat 33172689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 368 - 416
Target Start/End: Complemental strand, 9220413 - 9220365
Alignment:
Q  368 agtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||||| ||||| ||| |||||||||||||||||| |||||||||||    
T  9220413 agtggtcccccataaatcttattaattattttaatttaaaccgtttgat 9220365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 10978399 - 10978331
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    |||||||| |||||||||||||||| || ||||||||   ||||||||||||||| | || ||||||||    
T  10978399 taggcttaatagatcatttggtcccctaattaatttccaattttcattttggtcctataaataataaaa 10978331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 480 - 518
Target Start/End: Original strand, 25001811 - 25001849
Alignment:
Q  480 aacacgtaatttaattttcttttcttcatcttcttcctc 518  Q
    ||||| ||||||||||| |||||||||||||||||||||    
T  25001811 aacacctaatttaatttgcttttcttcatcttcttcctc 25001849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 20538065 - 20538118
Alignment:
Q  219 tttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaa 272  Q
    ||||||||| || ||||||||   ||||||||||||||||| ||||||||||||    
T  20538065 tttggtcccctaattaatttcaaattttcattttggtcccataattaataaaaa 20538118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 316
Target Start/End: Original strand, 28393251 - 28393340
Alignment:
Q  227 cttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    |||||||||||   || ||| ||||||||| |||||||||||||| |  ||||| ||||| |||| ||| || | |||||||||||||||    
T  28393251 cttatttaattctttggttttattttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 28393340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 271
Target Start/End: Original strand, 30857835 - 30857864
Alignment:
Q  242 gttttcattttggtcccacaattaataaaa 271  Q
    ||||||||||||||||||||||||||||||    
T  30857835 gttttcattttggtcccacaattaataaaa 30857864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 1e-71; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 201 - 417
Target Start/End: Original strand, 15232746 - 15232962
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctc 300  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||    
T  15232746 tttaggcttattagatcatttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctc 15232845  T
Q  301 cgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttt 399  Q
     |||||||||||||||| | |  ||||||||||| |||||||||||  ||  ||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  15232846 tgtttgccaaataaatcatgaccgttaagtttaa-cccaaatgatgtatatagtggaccaactttaaaagtggtccatcatagatcctattaattatttt 15232944  T
Q  400 aatttcaaccgtttgata 417  Q
    ||| ||||||||||||||    
T  15232945 aatatcaaccgtttgata 15232962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 222 - 414
Target Start/End: Complemental strand, 16965228 - 16965035
Alignment:
Q  222 ggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaa 321  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||| ||||||| || ||||| |||||||  ||||||||| |  |    
T  16965228 ggtcccttatttaatttcttattttcattttggtcccacaattaataaaaatgacgttttagtcccttacattttcttccgtttatcaaataaattccga 16965129  T
Q  322 atgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttg 414  Q
      |||||||||||||||||||||||  || |||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16965128 tggttaagtttaaccccaaatgatgtatatggtggaccaactttaagagtggtccaccatagatcctattaattattttaatttcaaccgtttg 16965035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 200 - 416
Target Start/End: Original strand, 49801610 - 49801826
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||| ||||   |||||||| |||  ||    
T  49801610 ttttaggcttattagatcatttggtcccttatttaattttatattttcattttggtcccacaattaataaaaatggtgttttgatccctcacgtttgtct 49801709  T
Q  300 ccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattt 398  Q
    | |||||||||||||||||  | |||||| ||||||| |||||||||  || |||  | |||||||||||||||||||||||| || |||||||||||||    
T  49801710 ctgtttgccaaataaatcc-gactgttaattttaacctcaaatgatgtttacggtaaaccaaccttaaaagtggtccaccataaattctattaattattt 49801808  T
Q  399 taatttcaaccgtttgat 416  Q
    |||||| |||||||||||    
T  49801809 taatttaaaccgtttgat 49801826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 200 - 318
Target Start/End: Complemental strand, 15234164 - 15234046
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  15234164 tttttggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcct 15234065  T
Q  300 ccgtttgccaaataaatcc 318  Q
    |||||||||||||||||||    
T  15234064 ccgtttgccaaataaatcc 15234046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 204 - 409
Target Start/End: Original strand, 16963831 - 16964034
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    |||||||||||||| |||||||  ||| |||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  16963831 aggcttattagatcgtttggtcttttaattaatttcatgttttcattttggtcccacaattaataaaaatggtgttttagtccctcatcttttcctccgt 16963930  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
    ||||||||||||| || | |||||| |||||| | ||||| |  || | |||| ||||||||||||||||||| |||||| | |||||||| | ||||||    
T  16963931 ttgccaaataaatgctgactgttaactttaactctaaatgtt--tatgatggaccaaccttaaaagtggtccatcatagaccttattaattttgttaatt 16964028  T
Q  404 tcaacc 409  Q
    | ||||    
T  16964029 ttaacc 16964034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 202 - 318
Target Start/End: Complemental strand, 49803016 - 49802900
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    |||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  49803016 ttaggcttgttagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccctcatctttttctcc 49802917  T
Q  302 gtttgccaaataaatcc 318  Q
    |||||||||||||||||    
T  49802916 gtttgccaaataaatcc 49802900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 233 - 416
Target Start/End: Complemental strand, 45585099 - 45584915
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  ||||||||||||||| ||||||||||||||    | |||  |||| |||| ||||||||||||||||||||||||||| |  |||||||||    
T  45585099 taatttcaagttttcattttggtctcacaattaataaaacgtaccttttggtccttcactttttcctccgtttgccaaataaatcctgaccgttaagttt 45585000  T
Q  333 aaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    || ||||||||||| ||| |||||  |||| |||| |||| |||||||||||||||||||||||||||||| | || ||||||||    
T  45584999 aaacccaaatgatgtctatggtggcccaactttaagagtgctccaccatagatcctattaattattttaatataaatcgtttgat 45584915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 204 - 381
Target Start/End: Original strand, 14470853 - 14471029
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||| ||||   ||||||| ||  |||||||  ||||||||||||||||||||||||||||||    || ||||||||||||| ||||||| |||    
T  14470853 aggcttatttgatccaatggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtacggttaagtccctcactttttccttcgt 14470952  T
Q  304 ttgccaaataaatcctaaa-tgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccata 381  Q
    ||||||||||||||||    ||||||||||||||||||| |   |||  ||||| ||||||||| ||||||||||||||    
T  14470953 ttgccaaataaatccttcggtgttaagtttaaccccaaacg--tctatagtggaccaaccttaagagtggtccaccata 14471029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 14477872 - 14477698
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc-taaatgttaagtttaaccccaa 340  Q
    ||||||| |||| |||||||||||||||||    |||||||||||||||| |||| ||||||||||||||||||||| |  |||||||||||||| | ||    
T  14477872 gttttcactttgatcccacaattaataaaacgtacgtttaagtccctcacttttttctccgtttgccaaataaatccttcgatgttaagtttaactctaa 14477773  T
Q  341 atgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
    |||   ||| ||| |||||| ||||| ||| ||||||||||||    ||||||| ||| ||||| ||||||||||||    
T  14477772 atg--tctatggtagatcaatcttaagagttgtccaccatagacttcattaattttttaaattttaaccgtttgata 14477698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 404
Target Start/End: Complemental strand, 9226188 - 9226135
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9226188 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 9226135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 249 - 468
Target Start/End: Complemental strand, 44999535 - 44999318
Alignment:
Q  249 ttttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc-taaatgttaagtttaaccccaaatgatgc 347  Q
    |||| |||||||||||||||||| ||||||||  |||| |||  |||||||| ||||||||||||||||| ||  |||||| |||||||  |||||   |    
T  44999535 ttttagtcccacaattaataaaattggcgttttcgtcc-tcattttttcctctgtttgccaaataaatccctagctgttaactttaaccttaaatgt--c 44999439  T
Q  348 taaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatannnnnnnnnnaaaagataaccattagatta 447  Q
    || |||||| ||| | ||| |||||| ||||||||||| ||||||||||||||| || |||| ||||||           ||||||| |||||| |||||    
T  44999438 tatggtggaccaatcgtaagagtggttcaccatagatcttattaattattttaacttaaaccatttgatcttgttttttcaaaagatgaccattggatta 44999339  T
Q  448 tgcaagtctattttatcttac 468  Q
     ||||||||||| ||||||||    
T  44999338 cgcaagtctattatatcttac 44999318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 5613083 - 5612993
Alignment:
Q  323 tgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| |||||||||||||| |  || ||||||||| |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  5613083 tgttaactttaaccccaaatgtt--tatggtggatca-cctttaaagtgatccaccatagatcctattaattattttaatttaaaccgtttgat 5612993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 200 - 416
Target Start/End: Complemental strand, 41874094 - 41873879
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    ||||||||||||||||||  ||||||||| | ||||||||   ||||||| |||||| || ||||||||||||     |||  | || | | ||||||||    
T  41874094 ttttaggcttattagatccattggtccctcaattaatttccatttttcatcttggtctcataattaataaaaagtatcttttggccctttagcttttcct 41873995  T
Q  300 ccgtttgccaaataaatcctaaat-gttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattt 398  Q
    |||||| |||||||||||||   | ||||||||||||| ||||||   ||| |||||| ||||||||| ||||||||||||||||    ||||||| |||    
T  41873994 ccgtttaccaaataaatccttggttgttaagtttaaccacaaatgt--ctatggtggaccaaccttaagagtggtccaccatagacttcattaatttttt 41873897  T
Q  399 taatttcaaccgtttgat 416  Q
     ||||| |||||||||||    
T  41873896 aaattttaaccgtttgat 41873879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 316 - 416
Target Start/End: Original strand, 51445699 - 51445798
Alignment:
Q  316 tcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttg 414  Q
    |||||| |||||| ||||||||| ||  ||| ||| ||||||||||| |||||| |||||||||||||||||||||||||||| |||||| |||||||||    
T  51445699 tcctaactgttaactttaacccccaa--atgtctatggtggatcaactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttg 51445796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 205 - 342
Target Start/End: Complemental strand, 52628991 - 52628854
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    |||||||| ||||  | |||||||||  |||||||  ||||| ||||||||||||||||||||||||    | |||  ||||||||  ||||||||||||    
T  52628991 ggcttatttgatctatcggtcccttaaataatttcaagttttaattttggtcccacaattaataaaacgtaccttttggtccctcattttttcctccgtt 52628892  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    |||||||||||||  ||  |||||||||||||||||||    
T  52628891 tgccaaataaatctcaaccgttaagtttaaccccaaat 52628854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 24499775 - 24499660
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||||||||| |||   |||||||| ||  |||||||  ||||||||||||||| |||||||||||||| |  |||||  ||||||||| ||||||||||    
T  24499775 taggcttatttgatttgttggtcccctaaataatttcaagttttcattttggtctcacaattaataaaactcacgttttggtccctcactttttcctccg 24499676  T
Q  303 tttgccaaataaatcc 318  Q
    ||| ||||||||||||    
T  24499675 tttaccaaataaatcc 24499660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 204 - 417
Target Start/End: Original strand, 46467143 - 46467354
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||| ||| ||| ||| ||| ||| ||||||||  |||||||||||||||||| || |||||||| |   ||||  ||||||||  ||| |||||||    
T  46467143 aggcttaataggtcaattgatcctttaattaatttcaagttttcattttggtcccataactaataaaactcatgtttcggtccctcaggtttgcctccgt 46467242  T
Q  304 ttgccaaataaat-cctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 402  Q
    ||| ||||||||| |||   ||||||||||||||  |||||   ||| |||||| |||| ||||||||| |||||| |||||  |||||| | |||||||    
T  46467243 ttgtcaaataaatccctcgctgttaagtttaaccataaatg--tctatggtggaccaacattaaaagtgatccaccgtagatgttattaaat-ttttaat 46467339  T
Q  403 ttcaaccgtttgata 417  Q
    || ||||||||||||    
T  46467340 ttaaaccgtttgata 46467354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 232 - 404
Target Start/End: Complemental strand, 15072881 - 15072710
Alignment:
Q  232 ttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc-taaatgttaagt 330  Q
    ||||||||  ||||||||||||||||||||||||||||||    | |||  |||||| |  |||||||||||||||||||||||||| |   |||||| |    
T  15072881 ttaatttcaagttttcattttggtcccacaattaataaaacgtacattttggtcccttattttttcctccgtttgccaaataaatccatgtctgttaact 15072782  T
Q  331 ttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 404  Q
    |||||| ||||||   ||| |||||| |||||| || ||||||||||| ||||  ||||||||| | |||||||    
T  15072781 ttaacctcaaatg--tctatggtggaccaacctaaagagtggtccaccgtagactctattaattttcttaattt 15072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 204 - 338
Target Start/End: Original strand, 41872573 - 41872707
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||| ||||   |||||||||  ||||||||   ||||||||||| ||  |||||||||||||    |||||||||| ||||| |||||||||||    
T  41872573 aggcttatttgatctaatggtcccttgattaatttcaacttttcattttgatcatacaattaataaaacgtacgtttaagtctctcactttttcctccgt 41872672  T
Q  304 ttgccaaataaatcctaaatgttaagtttaacccc 338  Q
    |||||||||||||| |   ||||||||||||||||    
T  41872673 ttgccaaataaatcattggtgttaagtttaacccc 41872707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 351 - 404
Target Start/End: Complemental strand, 13147389 - 13147336
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 404  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  13147389 ggtggaccaaccttaatagtggtccaccatagatcctattaattattttaattt 13147336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 242 - 381
Target Start/End: Original strand, 16123322 - 16123460
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat-cctaaatgttaagtttaaccccaa 340  Q
    |||||||||||||| ||||||||||||||| |  ||||| |||||||||  ||||| |||||||||||||||||| |||   |||||||||||| | |||    
T  16123322 gttttcattttggttccacaattaataaaattcacgttttagtccctcattttttcttccgtttgccaaataaatccctggttgttaagtttaatctcaa 16123421  T
Q  341 atgatgctaaggtggatcaaccttaaaagtggtccaccata 381  Q
    |||   ||| ||| || |||| ||||||||| |||||||||    
T  16123422 atg--tctatggtagaccaactttaaaagtgatccaccata 16123460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 324 - 383
Target Start/End: Original strand, 34350228 - 34350288
Alignment:
Q  324 gttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccataga 383  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||    
T  34350228 gttaagtttaaccccaaatgatgtctatggtggatcaaccttaagagtggtccaccataga 34350288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 205 - 416
Target Start/End: Complemental strand, 48097149 - 48096940
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    |||||| ||| |||||| ||||  || ||||||||   |||| |||||||||||| || |||||||| |   |||| ||||||| |  |||  ||||||     
T  48097149 ggcttaataggtcatttagtcctctaattaatttccaatttttattttggtcccataactaataaaactcatgttttagtcccttaggtttgtctccgtc 48097050  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 404  Q
     | |||||||||||  | |||||||||||||| ||||||    || |||||| ||||||||| ||||||| ||||||||||||||||||||||| ||| |    
T  48097049 ggtcaaataaatccctactgttaagtttaacctcaaatgta--tatggtggaccaaccttaagagtggtctaccatagatcctattaattatttaaatat 48096952  T
Q  405 caaccgtttgat 416  Q
     || ||||||||    
T  48096951 taatcgtttgat 48096940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 317 - 518
Target Start/End: Original strand, 48527645 - 48527842
Alignment:
Q  317 cctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||| |||||| |||||| |||||||   ||| ||| || |||| |||| |||||||||||||||||| ||| |||||||||||||| ||| |||||||    
T  48527645 cctaattgttaactttaactccaaatgt--ctatggtcgaccaactttaagagtggtccaccatagatcttatcaattattttaatttaaactgtttgat 48527742  T
Q  417 annnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttcttcc 516  Q
               ||| ||| |||||| |||||||||||| ||||||||||| | || |  ||| ||||  ||||| | |||||||||||||||||||||||    
T  48527743 --cttttttttaaatgatgaccattggattatgcaagtgtattttatcttccggtgagtcaataacaactaattaatttttcttttcttcatcttcttcc 48527840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 220 - 316
Target Start/End: Complemental strand, 51042445 - 51042350
Alignment:
Q  220 ttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    ||||||||||| ||||||||   ||||||||||||||||||||||||||||| |  ||||| ||||||||   |||| |||||||||||||||||||    
T  51042445 ttggtcccttaattaatttccaattttcattttggtcccacaattaataaaactcacgttttagtccctc-tttttttctccgtttgccaaataaat 51042350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 203 - 416
Target Start/End: Complemental strand, 46318737 - 46318526
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||||||| ||| ||||||||||| ||| ||||||||  ||||| ||||| |||||| || |||||||| |   ||||  ||||||||  | |  |||||    
T  46318737 taggcttaataggtcatttggtcctttaattaatttcaagttttgatttttgtcccataactaataaaagtcatgttttggtccctcaattgtatctccg 46318638  T
Q  303 tttgccaaataaatcctaaa-tgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaa 401  Q
    | || ||||||||||||    |||||||||||||||||||||   ||| | ||||| | | || | ||||||||||||||||||||||||| ||||||||    
T  46318637 tctgtcaaataaatccttggctgttaagtttaaccccaaatgt--ctatgatggatta-cttttagagtggtccaccatagatcctattaaatattttaa 46318541  T
Q  402 tttcaaccgtttgat 416  Q
    ||| || ||||||||    
T  46318540 tttaaatcgtttgat 46318526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 26286529 - 26286619
Alignment:
Q  323 tgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| |||||||||||||| |  || ||||||||| |||| |||||| |||||||||||  ||||||||||||||||||| |||||||||||    
T  26286529 tgttaactttaaccccaaatgtt--tatggtggatca-cctttaaagtgatccaccatagactctattaattattttaatttaaaccgtttgat 26286619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 358 - 416
Target Start/End: Complemental strand, 52078110 - 52078052
Alignment:
Q  358 caaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||| |||| | |||||||||||||||||||||||||||||| |||||||||||    
T  52078110 caaccttaagagtgatacaccatagatcctattaattattttaattttaaccgtttgat 52078052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 14478421 - 14478474
Alignment:
Q  363 ttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||||||||||    
T  14478421 ttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttgat 14478474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 201 - 416
Target Start/End: Complemental strand, 15746888 - 15746675
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctc 300  Q
    |||||||||| ||| |||||||||||| || ||||||||   ||||||||||||||||| || |||||||| |   ||||  |||||| |  | |  |||    
T  15746888 tttaggcttaataggtcatttggtcccctaattaatttccaattttcattttggtcccataagtaataaaactcatgttttggtcccttaattgtatctc 15746789  T
Q  301 cgtttgccaaataaatcctaaa-tgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttt 399  Q
    |||  | |||||||||| |  | |||||||||||||  ||||||   ||| |||||| ||| ||||| ||||||||||||||||||||||||| | ||||    
T  15746788 cgtcagtcaaataaatcatccactgttaagtttaacttcaaatgt--ctatggtggaccaatcttaagagtggtccaccatagatcctattaa-tctttt 15746692  T
Q  400 aatttcaaccgtttgat 416  Q
    ||||| |||| ||||||    
T  15746691 aattttaaccctttgat 15746675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 204 - 383
Target Start/End: Original strand, 23091348 - 23091527
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||| ||||  |||||||| ||  |||||||   |||||||||||||   |||||||||||||    |||||  ||| ||||| |||| ||||||    
T  23091348 aggcttatttgatctattggtcccctaactaatttcacattttcattttggttttacaattaataaaacgtacgttttggtcactcacttttttctccgt 23091447  T
Q  304 ttgccaaataaatcctaa--atgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccataga 383  Q
    |||||||||||||||  |   |||||||||||| | ||||||   ||| |||||| |||| |||||||||||||||||||||    
T  23091448 ttgccaaataaatccctagtctgttaagtttaatctcaaatg--tctatggtggaccaactttaaaagtggtccaccataga 23091527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 358 - 404
Target Start/End: Complemental strand, 3617463 - 3617417
Alignment:
Q  358 caaccttaaaagtggtccaccatagatcctattaattattttaattt 404  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  3617463 caaccttaagagtggtccactatagatcctattaattattttaattt 3617417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 416
Target Start/End: Complemental strand, 35943527 - 35943354
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc--taaatgttaagtttaaccccaa 340  Q
    |||| ||||||||||||||||||||||||    | |||  |||| |||| ||||||| ||||||||||||||||||  |   ||||||||||||||| ||    
T  35943527 tttttattttggtcccacaattaataaaacgtacattttggtcc-tcactttttccttcgtttgccaaataaatcccctggctgttaagtttaaccctaa 35943429  T
Q  341 atgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt-caaccgtttgat 416  Q
    |||   ||| |||||| ||||||||| |||| ||||||||||| | |||||| | ||||| |||  |||||||||||    
T  35943428 atgt--ctatggtggaccaaccttaagagtgatccaccatagaccttattaaattttttattttaaaaccgtttgat 35943354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 26802079 - 26802148
Alignment:
Q  347 ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||||| | ||||||||| ||| |||||| ||||||| ||||||| |||||||||| |||||||||||    
T  26802079 ctaaggtgaaccaaccttaagagttgtccactatagatcatattaatcattttaatttaaaccgtttgat 26802148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 232 - 319
Target Start/End: Complemental strand, 44278440 - 44278353
Alignment:
Q  232 ttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcct 319  Q
    ||||||||  ||||||||||||||||||| ||||||||||    |||||  ||||||||  |||| |||||||||||||||| |||||    
T  44278440 ttaatttcaagttttcattttggtcccacgattaataaaacgtacgttttggtccctcatttttttctccgtttgccaaatagatcct 44278353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 351 - 417
Target Start/End: Complemental strand, 6049398 - 6049332
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
    |||||| ||| || || ||||||||||| |||||||| |||||||||||||||| ||||| ||||||    
T  6049398 ggtggaccaatctaaatagtggtccaccgtagatcctgttaattattttaatttaaaccgattgata 6049332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 362 - 416
Target Start/End: Original strand, 12665944 - 12665998
Alignment:
Q  362 cttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||| |||||||||||||||||| |||||||| | ||||||| |||||||||||    
T  12665944 cttaagagtggtccaccatagatcttattaattttgttaatttaaaccgtttgat 12665998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 358 - 416
Target Start/End: Original strand, 13894763 - 13894821
Alignment:
Q  358 caaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| || ||| ||| |||||||||||| |||||||||||||||| |||||||||||    
T  13894763 caacctaaagagttgtctaccatagatcctgttaattattttaatttaaaccgtttgat 13894821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 318
Target Start/End: Complemental strand, 46111611 - 46111493
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    ||||||||||||| |||    ||||||||||  |||||||  ||||| ||||||||||||||||||||||||    | |||  || |||||  |||||||    
T  46111611 ttttaggcttatttgattcaatggtcccttaaataatttcaagtttttattttggtcccacaattaataaaacgtaccttttggttcctcattttttcct 46111512  T
Q  300 ccgtttgccaaataaatcc 318  Q
     ||||||||||||||||||    
T  46111511 tcgtttgccaaataaatcc 46111493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 351 - 404
Target Start/End: Complemental strand, 9485277 - 9485224
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 404  Q
    ||||||||||| |||| ||||||  |||||| ||||||||||||||||||||||    
T  9485277 ggtggatcaactttaagagtggttaaccataaatcctattaattattttaattt 9485224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 15979031 - 15979067
Alignment:
Q  347 ctaaggtggatcaaccttaaaagtggtccaccataga 383  Q
    ||||||||||||||||||||| |||||||||||||||    
T  15979031 ctaaggtggatcaaccttaaatgtggtccaccataga 15979067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 51300235 - 51300167
Alignment:
Q  349 aaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
    |||||||| |||| ||||||||||||||||||||| | |||||||| | | ||||| |||| |||||||    
T  51300235 aaggtggaccaacattaaaagtggtccaccatagaccttattaattttatgaattttaaccatttgata 51300167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 272
Target Start/End: Original strand, 52627512 - 52627580
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaa 272  Q
    ||||||||| ||||   |||||||| |  |||||||  |||||||||||||||||||||||||||||||    
T  52627512 aggcttatttgatccaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaaa 52627580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Original strand, 20064173 - 20064228
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtccca 259  Q
    ||||||| ||| ||||||||||||| | ||||||||  ||||||||||||||||||    
T  20064173 aggcttaatagctcatttggtccctcaattaatttcccgttttcattttggtccca 20064228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 42246006 - 42245939
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    ||||||| ||||||||||  ||||||| ||||||||  ||||| |||||||| ||| |||||||||||    
T  42246006 aggcttaatagatcatttaatcccttaattaatttcaagtttttattttggttccataattaataaaa 42245939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 293 - 416
Target Start/End: Original strand, 46110368 - 46110489
Alignment:
Q  293 ttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaa 392  Q
    |||| |||||||||| |||||||||   | |||||| |||||| | |||| || ||| |||||| ||||||||| ||||||||| | |||| | ||||||    
T  46110368 tttttctccgtttgctaaataaatctcgactgttaactttaactctaaat-at-ctatggtggaccaaccttaagagtggtccatcgtagaccttattaa 46110465  T
Q  393 ttattttaatttcaaccgtttgat 416  Q
    || | ||||||| |||||||||||    
T  46110466 ttttgttaattttaaccgtttgat 46110489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 27556431 - 27556476
Alignment:
Q  370 tggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||    
T  27556431 tggtccaccatagatcctattaatt-ttttaatttaaacagtttgat 27556476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 42244629 - 42244695
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    |||||| ||| ||||||||||| ||| ||||||||   ||||||||||| ||||| |||||||||||    
T  42244629 ggcttaataggtcatttggtcctttaattaatttcaaattttcattttgatcccataattaataaaa 42244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 359 - 416
Target Start/End: Complemental strand, 18821704 - 18821647
Alignment:
Q  359 aaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||||| ||||||| |||| |||||||||||||| ||| || || |||||||||||    
T  18821704 aaccttaagagtggtctaccaaagatcctattaattttttaaaatttaaccgtttgat 18821647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 242 - 271
Target Start/End: Complemental strand, 34352037 - 34352008
Alignment:
Q  242 gttttcattttggtcccacaattaataaaa 271  Q
    ||||||||||||||||||||||||||||||    
T  34352037 gttttcattttggtcccacaattaataaaa 34352008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 351 - 416
Target Start/End: Complemental strand, 46111469 - 46111404
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||||| ||||||||||||||  ||||||| |||||||| | ||||| | ||| |||||||    
T  46111469 ggtggatcaactttaaaagtggtccatgatagatcttattaattgtgttaatcttaactgtttgat 46111404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 4e-68; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 202 - 416
Target Start/End: Original strand, 42098558 - 42098772
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||   |||| ||| |||  ||||    
T  42098558 ttaggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttgatcccccacgtttgtctcc 42098657  T
Q  302 gtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttta 400  Q
    |||||||||||||||||  | |||||| ||||||||||||||||| ||  |||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  42098658 gtttgccaaataaatcc-gactgttaattttaaccccaaatgatgtctttggtggaccaaccttaaaagtggtccaccatagatcctattaattacttta 42098756  T
Q  401 atttcaaccgtttgat 416  Q
    ||||||||||||||||    
T  42098757 atttcaaccgtttgat 42098772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 204 - 416
Target Start/End: Complemental strand, 13117752 - 13117540
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| ||    
T  13117752 aggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctctgt 13117653  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgat-gctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 402  Q
    |||||||||||||||  |   | |||||||| ||||||||||   ||  ||||| |||| |||||||||||||| |||||||||||||||||||||||||    
T  13117652 ttgccaaataaatcccgaccatcaagtttaa-cccaaatgatctatatagtggaccaactttaaaagtggtccatcatagatcctattaattattttaat 13117554  T
Q  403 ttcaaccgtttgat 416  Q
     |||||||||||||    
T  13117553 atcaaccgtttgat 13117540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 204 - 342
Target Start/End: Complemental strand, 17339668 - 17339530
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    |||||||||||||| ||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| ||| |||||||||| |||||||||||    
T  17339668 aggcttattagatcgtttggtcccttatttaatttcatattttcattttggtccaacaattaataaaaatggcattttagtccctcacgttttcctccgt 17339569  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    |||||||||||||||| | ||||||||||||| ||||||    
T  17339568 ttgccaaataaatcctgactgttaagtttaactccaaat 17339530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 203 - 513
Target Start/End: Complemental strand, 32695395 - 32695088
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||||||||| |||   ||||||||| |  |||||||  ||||||||||||||| ||||||||||||||    ||||||||||| |||| |||||||| |    
T  32695395 taggcttatttgattcattggtccctcaaataatttcaagttttcattttggtctcacaattaataaaacgtacgtttaagtccttcacgttttcctctg 32695296  T
Q  303 tttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaa 401  Q
    |||||||||| | |||| |  ||||||||||||||||||||||| ||| |||| | ||| ||||| | ||||||||||||||||||||||||||||||||    
T  32695295 tttgccaaattagtcctgaccgttaagtttaaccccaaatgatgtctatggtgaaccaatcttaagattggtccaccatagatcctattaattattttaa 32695196  T
Q  402 tttcaaccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttt 501  Q
    ||| |||||||||||           |||||| ||||||| |||||  |||||||||||||||||||  || |||| |||||| ||||||  ||| ||||    
T  32695195 tttaaaccgtttgat---ttttttttaaaagagaaccattggattagacaagtctattttatcttacgatataccaccaacacctaattt-ttttccttt 32695100  T
Q  502 tcttcatcttct 513  Q
    ||||||||||||    
T  32695099 tcttcatcttct 32695088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 203 - 343
Target Start/End: Original strand, 13116326 - 13116466
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| |||| ||||||||||    
T  13116326 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaagtggcgttttagtccttcacattttcctccg 13116425  T
Q  303 tttgccaaataaatcctaaatgttaagtttaaccccaaatg 343  Q
    ||||||||||||||||  | |||||| |||||| |||||||    
T  13116426 tttgccaaataaatcccgactgttaactttaactccaaatg 13116466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 200 - 416
Target Start/End: Complemental strand, 32798655 - 32798439
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    ||||||||||||| |||    |||||||| |  |||||||  ||||||||||||||||||||||||||||||    | ||| |||||||||  |||| ||    
T  32798655 ttttaggcttatttgatgcaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttagtccctcaattttttct 32798556  T
Q  300 ccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattt 398  Q
    ||||||| |||||||||||| |  |||||||||||| | |||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  32798555 ccgtttgtcaaataaatcctcacggttaagtttaactc-aaatgatgtctatggtggatcaaccttaagagtggtccaccatagatcctattaattattt 32798457  T
Q  399 taatttcaaccgtttgat 416  Q
    |||||| |||||||||||    
T  32798456 taatttaaaccgtttgat 32798439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 17338038 - 17338151
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||    
T  17338038 aggcttattaaatcgtttggtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacatttttctccgt 17338137  T
Q  304 ttgccaaataaatc 317  Q
    ||||||||||||||    
T  17338138 ttgccaaataaatc 17338151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 202 - 409
Target Start/End: Complemental strand, 42100227 - 42100022
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||   |||||||  |||||||||    
T  42100227 ttaggcttattagatcgtttgatcccttatttaatttcatgttttcattttggtctcacaattaataaaaatggcgttttgatccctcatattttcctcc 42100128  T
Q  302 gtttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaa 401  Q
    ||||||||||||| |||  | |||||| ||||||  ||||||   ||  |||||| ||||||||||||||||||| | |||| | |||||||| | ||||    
T  42100127 gtttgccaaataattcccgactgttaactttaacttcaaatg--tctttggtggaccaaccttaaaagtggtccatcgtagaccttattaattttgttaa 42100030  T
Q  402 tttcaacc 409  Q
    ||| ||||    
T  42100029 ttttaacc 42100022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 233 - 416
Target Start/End: Original strand, 6397809 - 6397990
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    ||||||| | ||||||||||||||||||||||||||||| |  | ||| |||||||||  |||| |||||||||||||||||||| | |||||||| |||    
T  6397809 taatttcatattttcattttggtcccacaattaataaaacttacattttagtccctcatttttttctccgtttgccaaataaatcatgaatgttaaattt 6397908  T
Q  333 aaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||| |||||| |  ||| |||  | ||||||| | |||||||||||||||| | |||||||| ||||||||| |||| ||||||    
T  6397909 aactccaaataa--ctatggtaaaccaacctttacagtggtccaccatagaccttattaatttttttaatttaaaccatttgat 6397990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 233 - 416
Target Start/End: Original strand, 42870839 - 42871023
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  ||||||||||||||||||||||||||||||    ||||| ||||||| || ||||| || ||||||| ||| |||||| | ||||||||||    
T  42870839 taatttcaagttttcattttggtcccacaattaataaaacgtacgttttagtcccttactttttcgtctgtttgccgaatgaatcctgactgttaagttt 42870938  T
Q  333 aaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||| |||| |||  ||||| ||| ||||| ||||||||||| |||| | |||||| | || |||||| |||||||||||    
T  42870939 aaccccaaaagatgtctattgtggaccaatcttaagagtggtccaccgtagaccttattaaattttgtaatttaaaccgtttgat 42871023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 243 - 416
Target Start/End: Complemental strand, 44076443 - 44076269
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    |||| ||||||||||||||||||||||||      |||  || |||||  ||||||||||||||||||||||||||  |  |||||||||||||||||||    
T  44076443 tttttattttggtcccacaattaataaaacgtatcttttggtgcctcaatttttcctccgtttgccaaataaatccctacagttaagtttaaccccaaat 44076344  T
Q  343 gatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||| ||| |||||| |||| |||||| || ||||||||| ||| |||||||| ||||||||| |||| ||||||    
T  44076343 gatgtctatggtggaacaacattaaaaatgatccaccataaatcttattaatttttttaatttaaaccatttgat 44076269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 211594 - 211706
Alignment:
Q  206 gcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgttt 305  Q
    ||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||  | ||||| ||||||| |  |||| ||||||||    
T  211594 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 211693  T
Q  306 gccaaataaatcc 318  Q
     ||||||||||||    
T  211694 accaaataaatcc 211706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 240662 - 240550
Alignment:
Q  206 gcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgttt 305  Q
    ||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||  | ||||| ||||||| |  |||| ||||||||    
T  240662 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 240563  T
Q  306 gccaaataaatcc 318  Q
     ||||||||||||    
T  240562 accaaataaatcc 240550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 725217 - 725329
Alignment:
Q  206 gcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgttt 305  Q
    ||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||  | ||||| ||||||| |  |||| ||||||||    
T  725217 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 725316  T
Q  306 gccaaataaatcc 318  Q
     ||||||||||||    
T  725317 accaaataaatcc 725329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 794017 - 793905
Alignment:
Q  206 gcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgttt 305  Q
    ||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||  | ||||| ||||||| |  |||| ||||||||    
T  794017 gcttattagatcatttgatcccttaaataatttcatgttttcattttggtcccacaattaataaaacagacgttttagtcccttaattttttctccgttt 793918  T
Q  306 gccaaataaatcc 318  Q
     ||||||||||||    
T  793917 accaaataaatcc 793905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 233 - 416
Target Start/End: Complemental strand, 45281278 - 45281096
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  |||||||||||||||| |||||||||||||||    ||| | ||| |||  ||||||||| |||||||||||||||| ||  ||||| |||    
T  45281278 taatttcaagttttcattttggtccaacaattaataaaaatatgttttga-tccttcagattttcctccatttgccaaataaatcccaacagttaacttt 45281180  T
Q  333 aaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    || || |||||||| ||| |||||| ||||||||| ||||||| |||||| |||||||||||  ||||||||| |||||||||||    
T  45281179 aatcc-aaatgatgtctacggtggaccaaccttaagagtggtctaccataaatcctattaatatttttaatttaaaccgtttgat 45281096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 202 - 416
Target Start/End: Original strand, 42877614 - 42877825
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    ||||||||| ||| | |||||||| |||| ||||||||  ||||||||||||||| || || |||||||| |   ||||  ||||||||| |||  || |    
T  42877614 ttaggcttaataggttatttggtctcttaattaatttcaagttttcattttggtctcataactaataaaactcatgttttggtccctcacgtttgtcttc 42877713  T
Q  302 gtttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaa 401  Q
    ||  | |||||||||||  |  ||||| |||||||||||||| || || |||||| ||||||||| | |||||||||||||||||||||||||| |||||    
T  42877714 gtcagtcaaataaatcccgacggttaactttaaccccaaatg-tg-tatggtggaccaaccttaagaatggtccaccatagatcctattaatta-tttaa 42877810  T
Q  402 tttcaaccgtttgat 416  Q
    |||||||| ||||||    
T  42877811 tttcaaccctttgat 42877825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 201 - 317
Target Start/End: Original strand, 28418800 - 28418916
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctc 300  Q
    |||||||||| ||||||  |||||||||||  |||||||   ||||||||||||||||| |||||||||||    ||||| |||||||||| ||||||||    
T  28418800 tttaggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctc 28418899  T
Q  301 cgtttgccaaataaatc 317  Q
    |||||||||||||||||    
T  28418900 cgtttgccaaataaatc 28418916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 32797136 - 32797245
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    |||||||| ||||  |||||||||||  |||||||  ||||||||||||||||||||||||||||||    |||||||||||||||  ||||||||||||    
T  32797136 ggcttatttgatctattggtcccttaaataatttcaagttttcattttggtcccacaattaataaaacgtacgtttaagtccctcaggttttcctccgtt 32797235  T
Q  305 tgccaaataa 314  Q
    | ||||||||    
T  32797236 taccaaataa 32797245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 436 - 554
Target Start/End: Complemental strand, 6398405 - 6398286
Alignment:
Q  436 accattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttcttcc-tccctcacttcataattc 534  Q
    |||||| ||||||| ||||||| |||||||||| || || ||||||||| |||||| |||| ||||||||||||||||||| ||||   |||||||||||    
T  6398405 accattggattatgtaagtctactttatcttacggtgaatcaacaacacctaattttatttccttttcttcatcttcttccttccccttcttcataattc 6398306  T
Q  535 aacatcaccttcttcatcac 554  Q
    ||||  |||||| |||||||    
T  6398305 aacaataccttcatcatcac 6398286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 323 - 416
Target Start/End: Complemental strand, 24192662 - 24192571
Alignment:
Q  323 tgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| |||||||| |||||   ||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  24192662 tgttaactttaaccctaaatgt--ctatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgat 24192571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 243 - 404
Target Start/End: Complemental strand, 26697912 - 26697753
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    |||||||||| |||||| |||||||||||    ||||| |||||||||| ||||| ||| |||| | |||||||||||| ||||||||||||||||||||    
T  26697912 ttttcattttagtcccataattaataaaacgtacgttttagtccctcactttttcttccttttgtcgaataaatcctaattgttaagtttaaccccaaat 26697813  T
Q  343 gatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 404  Q
    | |  || |||||| |||| ||| |  | |||||||||||| |||| |||||  ||||||||    
T  26697812 gtt--tatggtggaccaacattatatatagtccaccatagaccctagtaatttctttaattt 26697753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 203 - 394
Target Start/End: Complemental strand, 42872309 - 42872120
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||||||||| ||||   ||||||||||  ||||||   |||||||||||  || || ||| |||||||    ||||| ||||| |||| ||||||||||    
T  42872309 taggcttatttgatccaatggtcccttaaataattttaagttttcattttaatctcataatgaataaaacgtacgttttagtccttcactttttcctccg 42872210  T
Q  303 tttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaatt 394  Q
    |||| |||||||||||| |  ||||| ||||||| ||||||   ||| ||| || ||||||||| ||||||| |||||||||||||||||||    
T  42872209 tttgtcaaataaatcctgacggttaactttaacctcaaatg--tctatggtagaccaaccttaagagtggtctaccatagatcctattaatt 42872120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 6398577 - 6398478
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    |||||||||||||| || |||||||||||   |||||| |||||||||  |||||||||||||| |||||||||| | | ||||||||||||||| ||||    
T  6398577 ttttcattttggtctcataattaataaaacaagcgttttagtccctcattttttcctccgtttgtcaaataaatcatgactgttaagtttaaccctaaat 6398478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 200 - 319
Target Start/End: Original strand, 26696525 - 26696644
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    ||||||||||||| |||    ||||||| || ||||||||  ||||||||||||||||||||||||||||||    | |||  ||||||||| |||||||    
T  26696525 ttttaggcttatttgattcaatggtcccctaattaatttcaagttttcattttggtcccacaattaataaaacatacattttggtccctcactttttcct 26696624  T
Q  300 ccgtttgccaaataaatcct 319  Q
    || |||||||||||||||||    
T  26696625 ccatttgccaaataaatcct 26696644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 358 - 417
Target Start/End: Complemental strand, 40437562 - 40437503
Alignment:
Q  358 caaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  40437562 caaccttaaaagtggtccaccgtagatcctattaattattttaatttaaactgtttgata 40437503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 243 - 416
Target Start/End: Original strand, 4810505 - 4810674
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    |||| |||||||||||| |||||||||||     ||||  |||| |||  |||| |||||||||||||||||||||  |  ||||| |||||||||||||    
T  4810505 tttttattttggtcccataattaataaaacgtatgttttggtccttcaaatttttctccgtttgccaaataaatcccgacggttaactttaaccccaaat 4810604  T
Q  343 gatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||| ||| ||||||      |||| ||||||||||||||||||||||||||  ||||||||| ||| |||||||    
T  4810605 gatgtctatggtggaa-----ttaagagtggtccaccatagatcctattaatatttttaatttaaactgtttgat 4810674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 233 - 416
Target Start/End: Original strand, 22551033 - 22551214
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaat-gttaagtt 331  Q
    |||||||  ||||| ||||||||||||||||||||||||      |||  ||||||||| ||||| ||| |||||||||||||||||  || ||||||||    
T  22551033 taatttcaagtttttattttggtcccacaattaataaaacgtatcttttggtccctcactttttc-tccatttgccaaataaatcctggattgttaagtt 22551131  T
Q  332 taaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||||||||    ||| ||||||  ||||||||||||| ||||||||| | | |||||| | || |||||| |||||||||||    
T  22551132 taaccccaaatct--ctatggtggacaaaccttaaaagtgatccaccataaaccttattaaattttgtaatttaaaccgtttgat 22551214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 204 - 317
Target Start/End: Complemental strand, 28420293 - 28420180
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||| ||||||  |||||||||||  |||||||   ||||||||||||||||| |||||||||||    ||||| |||||||||  |||||||||||    
T  28420293 aggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccgt 28420194  T
Q  304 ttgccaaataaatc 317  Q
    ||| ||||||||||    
T  28420193 ttgtcaaataaatc 28420180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 43202240 - 43202304
Alignment:
Q  352 gtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||| ||||| ||| |||||||    
T  43202240 gtggatcaaccttaagagtggtccaccatagatcctattagttatttaaatttaaactgtttgat 43202304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 358 - 417
Target Start/End: Complemental strand, 10669411 - 10669352
Alignment:
Q  358 caaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  10669411 caaccttaagagtggtccaccatagatcctattaaatattttaatttaaaccgattgata 10669352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 362 - 413
Target Start/End: Original strand, 17455201 - 17455252
Alignment:
Q  362 cttaaaagtggtccaccatagatcctattaattattttaatttcaaccgttt 413  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  17455201 cttaaaagtggtccaccatagatcttattaattattttaatttgaaccgttt 17455252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 242 - 416
Target Start/End: Original strand, 32693865 - 32694037
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaa 341  Q
    ||||||||||||||||||||||||||||||    || ||  |||| |||  |||||||||||||||||||||||||| ||  ||||| ||||||   |||    
T  32693865 gttttcattttggtcccacaattaataaaacatacgctttggtccttcagattttcctccgtttgccaaataaatcccaacagttaactttaactttaaa 32693964  T
Q  342 tgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||    || | |||| ||||||||||||||| | | |||||| | |||||||| | ||||||| |||||||||||    
T  32693965 tg--tatatgatggaccaaccttaaaagtggcctatcatagaccttattaattttattaattttaaccgtttgat 32694037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 233 - 303
Target Start/End: Complemental strand, 13198031 - 13197961
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    |||||||| |||||| |||||||||||||||||||||||    |||||||||||||||| |||||||||||    
T  13198031 taatttcgagttttcgttttggtcccacaattaataaaaggtacgtttaagtccctcactttttcctccgt 13197961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 20180635 - 20180582
Alignment:
Q  363 ttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||| ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  20180635 ttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgat 20180582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 217 - 416
Target Start/End: Original strand, 38696318 - 38696516
Alignment:
Q  217 catttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    ||||||||||| || |||||||   ||||||||||||||| || || |||||||| |   ||||  ||||||||  ||| |||||||  | |||||||||    
T  38696318 catttggtcccctaattaattttaagttttcattttggtctcataactaataaaactcatgttttggtccctcaagtttgcctccgtcggtcaaataaat 38696417  T
Q  317 cc-taaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttga 415  Q
    || |   | ||||||||||||| |||||   ||| ||| || ||||||||||||||||||||||||||||  ||||||| || |||||| |||| |||||    
T  38696418 cccttgctattaagtttaaccctaaatgt--ctatggtagaccaaccttaaaagtggtccaccatagatctaattaatttttataattttaaccctttga 38696515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 317
Target Start/End: Complemental strand, 212792 - 212718
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    |||||||||| ||||||||||||| ||||  || |||| |||||||||| ||||||| |||||| ||||||||||    
T  212792 ttttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatc 212718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 317
Target Start/End: Original strand, 239462 - 239536
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    |||||||||| ||||||||||||| ||||  || |||| |||||||||| ||||||| |||||| ||||||||||    
T  239462 ttttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatc 239536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 317
Target Start/End: Complemental strand, 726415 - 726341
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    |||||||||| ||||||||||||| ||||  || |||| |||||||||| ||||||| |||||| ||||||||||    
T  726415 ttttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatc 726341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 317
Target Start/End: Original strand, 792817 - 792891
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    |||||||||| ||||||||||||| ||||  || |||| |||||||||| ||||||| |||||| ||||||||||    
T  792817 ttttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatc 792891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 243 - 317
Target Start/End: Complemental strand, 798916 - 798842
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    |||||||||| ||||||||||||| ||||  || |||| |||||||||| ||||||| |||||| ||||||||||    
T  798916 ttttcattttcgtcccacaattaaaaaaacaggtgttttagtccctcactttttccttcgtttgtcaaataaatc 798842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 308 - 398
Target Start/End: Complemental strand, 42878846 - 42878756
Alignment:
Q  308 caaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattt 398  Q
    |||||||||||| |  ||||| |||||||||  |  ||| || |||||| |||||||||  ||||||||||||||||||||||||||||||    
T  42878846 caaataaatcctgacagttaactttaaccccccaaaatgttatggtggaccaaccttaagtgtggtccaccatagatcctattaattattt 42878756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 8570132 - 8570229
Alignment:
Q  221 tggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    ||||||| || ||||||||  |||||||||||||||| |||||||||||||    |||||  ||||||||| |||  ||| |||||||||||||||||    
T  8570132 tggtcccctaattaatttcacgttttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttgtctctgtttgccaaataaatcc 8570229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 243 - 416
Target Start/End: Complemental strand, 8571697 - 8571524
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaat--gttaagtttaaccccaa 340  Q
    ||||||||||||||  |||||||||||||    |||||  |||| |||  |||| |||||||| ||||||||||||  | |  |||||||||||||||||    
T  8571697 ttttcattttggtcatacaattaataaaacgtacgttttggtccttcatttttttctccgtttaccaaataaatccctagtctgttaagtttaaccccaa 8571598  T
Q  341 atgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||   ||| |||||| |||| |||||| |||||||||||| | | ||||||   ||||||||| ||| |||||||    
T  8571597 atgt--ctatggtggaccaactttaaaaatggtccaccatataccttattaaactttttaatttaaactgtttgat 8571524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 351 - 416
Target Start/End: Complemental strand, 9854852 - 9854787
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| |||| |||| ||||||||||||||||||||||||||| || |||||| |||| ||||||    
T  9854852 ggtggaccaactttaagagtggtccaccatagatcctattaattcttctaatttaaaccatttgat 9854787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 325 - 417
Target Start/End: Complemental strand, 14840896 - 14840806
Alignment:
Q  325 ttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
    |||||||||||| ||||||   ||| |||||| |||| ||||||||| |||||||||| || |||||| | ||||||||| ||||||||||||    
T  14840896 ttaagtttaaccacaaatgt--ctatggtggaccaacattaaaagtgatccaccatagttcttattaaattttttaatttaaaccgtttgata 14840806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 242 - 335
Target Start/End: Complemental strand, 30787681 - 30787588
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaac 335  Q
    |||||||||||||||||| |||||||||||      |||  ||||||||| ||||| |||||||||||||||||||||  ||||||| ||||||    
T  30787681 gttttcattttggtcccataattaataaaatatatattttggtccctcactttttcttccgtttgccaaataaatcctgtatgttaactttaac 30787588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 416
Target Start/End: Original strand, 30786753 - 30786885
Alignment:
Q  284 tccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt--aaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccata 381  Q
    |||||||| |||| ||||||||||||||||||| |  | |||||| |||  ||| | |||||   ||| ||||||||||| |||||||||||||| ||||    
T  30786753 tccctcacttttttctccgtttgccaaataaattccgactgttaactttttaactctaaatgt--ctatggtggatcaactttaaaagtggtccatcata 30786850  T
Q  382 gatcctattaattattttaatttcaaccgtttgat 416  Q
     | | |||||||| | ||||||| |||||||||||    
T  30786851 aaccttattaattttgttaattttaaccgtttgat 30786885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 38697126 - 38697058
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    |||||||| ||| ||||||||||||| | ||||||||  |||||||||||||||||| || ||||||||    
T  38697126 taggcttaatagctcatttggtccctcaattaatttccagttttcattttggtcccataactaataaaa 38697058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 204 - 342
Target Start/End: Complemental strand, 45437601 - 45437462
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||| ||| ||||||| |||| || ||||||||  |||||||||||| ||||| ||||||||||| |   ||||  |||||||   ||| ||||||     
T  45437601 aggcttaataggtcatttgatcccctaattaatttcaagttttcattttgatcccataattaataaaactcatgttttggtccctcgtgtttgcctccgc 45437502  T
Q  304 ttgccaaataaat-cctaaatgttaagtttaaccccaaat 342  Q
    | | ||||||||| ||| | ||||||||||||||||||||    
T  45437501 tagtcaaataaatccctgactgttaagtttaaccccaaat 45437462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 31845757 - 31845703
Alignment:
Q  362 cttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||| ||||||||||||||| ||||||||||||||||||| | ||| |||||||    
T  31845757 cttaagagtggtccaccataggtcctattaattattttaatgtaaactgtttgat 31845703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 37400942 - 37400988
Alignment:
Q  370 tggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||    
T  37400942 tggtccaccatagatcctattaatttttttaatataaaccgtttgat 37400988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 319
Target Start/End: Complemental strand, 23708868 - 23708753
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||||||||  |||||||| ||  ||||||  | ||||||||||||||||| | ||||||||| |||||  | |||||||||  | ||   ||||    
T  23708868 aggcttattagatccattggtcccctaactaatttgttattttcattttggtcccatatttaataaaagtggcgaattagtccctcaaatattgagccgt 23708769  T
Q  304 ttgccaaataaatcct 319  Q
    |||||||| |||||||    
T  23708768 ttgccaaaaaaatcct 23708753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 29103527 - 29103598
Alignment:
Q  247 cattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    |||||||||||||||||||||||||    | ||| |||||||||  |||||||||| |||| ||||||||||    
T  29103527 cattttggtcccacaattaataaaacgtacatttgagtccctcattttttcctccgattgctaaataaatcc 29103598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 243 - 346
Target Start/End: Complemental strand, 41630204 - 41630102
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    |||||||||| ||| ||||||||||||||    | |||||||||||||  |||| ||  |||||  ||||||||||  || |||||||||||||||||||    
T  41630204 ttttcattttagtctcacaattaataaaacgtacctttaagtccctcaattttttctatgtttgttaaataaatcccgaa-gttaagtttaaccccaaat 41630106  T
Q  343 gatg 346  Q
    ||||    
T  41630105 gatg 41630102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 41743734 - 41743667
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    ||||||| ||| ||||||||||| ||| |||||||   |||||||||||||||||| || ||||||||    
T  41743734 aggcttaataggtcatttggtcctttaattaattttaagttttcattttggtcccataagtaataaaa 41743667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 42878935 - 42878880
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtccca 259  Q
    ||||||| ||| |||||||||||| || ||||||||  ||||||||||||||||||    
T  42878935 aggcttaataggtcatttggtcccctaattaatttcaagttttcattttggtccca 42878880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 45394972 - 45395031
Alignment:
Q  212 tagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    ||||||||||| ||||||| |||||||   |||||||||||| ||||| |||||||||||    
T  45394972 tagatcatttgatcccttaattaattttaagttttcattttgatcccataattaataaaa 45395031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 23702955 - 23703069
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    |||||||||||||  |||||||| ||  ||||||  | ||||||||||||||||| | ||||||||| |||||  | |||||||||  | ||   |||||    
T  23702955 ggcttattagatccattggtcccctaactaatttgttattttcattttggtcccatatttaataaaagtggcgaattagtccctcaaatattgagccgtt 23703054  T
Q  305 tgccaaataaatcct 319  Q
    ||||||| |||||||    
T  23703055 tgccaaaaaaatcct 23703069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 243 - 317
Target Start/End: Complemental strand, 29104445 - 29104371
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    |||| |||||| |||||||||||||||||     ||||||||||||||  |||||||| ||||| ||||||||||    
T  29104445 tttttattttgatcccacaattaataaaacgtatgtttaagtccctcattttttcctctgtttgtcaaataaatc 29104371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 316
Target Start/End: Complemental strand, 416649 - 416560
Alignment:
Q  227 cttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    |||||||||||   || ||| ||||||||| |||||||||||||| |  ||||| ||||| |||| ||| || | |||||||||||||||    
T  416649 cttatttaattctttggttttattttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 416560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 13513572 - 13513625
Alignment:
Q  363 ttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||||||||||||| | | |||||||| ||||||||| |||| ||||||    
T  13513572 ttaaaagtggtccaccatataccttattaatttttttaattttaaccatttgat 13513625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 13603105 - 13603158
Alignment:
Q  363 ttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||||||||||||| | | |||||||| ||||||||| |||| ||||||    
T  13603105 ttaaaagtggtccaccatataccttattaatttttttaattttaaccatttgat 13603158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 316
Target Start/End: Original strand, 37400818 - 37400907
Alignment:
Q  227 cttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    |||||||||||   || ||| ||||||||| |||||||||||||| |  ||||| ||||| |||| ||| || | |||||||||||||||    
T  37400818 cttatttaattctttggttttattttggtctcacaattaataaaactcacgttttagtccttcacgtttcccacagtttgccaaataaat 37400907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 4e-68; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 201 - 513
Target Start/End: Original strand, 7707582 - 7707892
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctc 300  Q
    |||||| |||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||    
T  7707582 tttaggtttattagatcttttagtcccttatttaatttcatgttttcattttggtcccacaattaataaaaatgacgttttagtccatcacattttcctc 7707681  T
Q  301 cgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttt 399  Q
     |||||||||||||||||| |  ||||  |||||| |||||||||| ||  ||| || ||||||||| ||||||||||||||||||||||||||||||||    
T  7707682 tgtttgccaaataaatcctgacggttagctttaacaccaaatgatgtctttggtagaccaaccttaagagtggtccaccatagatcctattaattatttt 7707781  T
Q  400 aatttcaaccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttct 499  Q
    |||||||||||||||||           |||||| ||||||| ||||| ||| ||||||||||||||||  |  |||| |||||| | ||||  ||||||    
T  7707782 aatttcaaccgtttgat--tttttctttaaaagagaaccattggattaggcaggtctattttatcttacgatgtaccatcaacacattattt-tttttct 7707878  T
Q  500 tttcttcatcttct 513  Q
    ||||||||||||||    
T  7707879 tttcttcatcttct 7707892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 204 - 513
Target Start/End: Original strand, 23201843 - 23202149
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    |||||||||||||  ||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||| |||  |||||||||||||||||||||    
T  23201843 aggcttattagattgtttggtcccttatttaatttcatgtttttattttggtcccacatttaataaaaatggcattttggtccctcaccttttcctccgt 23201942  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 402  Q
    ||||||||||||||| ||  |||||||||||    ||||||||  || ||||||||| | |||| |||||| |||||||| |||||||||||||||||||    
T  23201943 ttgccaaataaatcccaaccgttaagtttaa-taaaaatgatgtttatggtggatcatctttaagagtggtacaccataggtcctattaattattttaat 23202041  T
Q  403 ttcaaccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttctttt 502  Q
    ||| ||||||||||           |||||| |||||||  |||| ||| ||||||||||||||||  |  |||| |||||| |||||   |||||||||    
T  23202042 ttcgaccgtttgatttaaaaaaaaaaaaagagaaccattgaattaagcaggtctattttatcttacgatgtaccaccaacacctaatt---ttttctttt 23202138  T
Q  503 cttcatcttct 513  Q
    |||||||||||    
T  23202139 cttcatcttct 23202149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 204 - 416
Target Start/End: Complemental strand, 2312601 - 2312388
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||| ||||  |||||||||||  |||||||  |||| |||||| ||||||||||||||||||    |||||||||||||||| |||||||||||    
T  2312601 aggcttatttgatccattggtcccttagataatttcaagtttccattttagtcccacaattaataaaacgtacgtttaagtccctcactttttcctccgt 2312502  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 402  Q
    |||||||||||||| | |  ||||||||||||||||||||||| ||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  2312501 ttgccaaataaatcatgaccgttaagtttaaccccaaatgatgtctatggtggaccaatcttaaaagtggtccaccatagatcctattaattattttaat 2312402  T
Q  403 ttcaaccgtttgat 416  Q
    || ||| |||||||    
T  2312401 ttaaactgtttgat 2312388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 202 - 416
Target Start/End: Original strand, 50546901 - 50547114
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    |||||| ||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||    
T  50546901 ttaggcgtattagatcatttggtcccttatttaatttcatgtcttcattttagtcccacaattaataaaaatggcgttttagtccctcatcttttccacc 50547000  T
Q  302 gtttgccaaataaat-cctaaatgttaagtttaaccc-caaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttt 399  Q
    ||||||||||||||| ||||  ||||||||||||||| ||||||   ||| || |||| ||||||| ||||||||||||||| |  ||||||||| ||||    
T  50547001 gtttgccaaataaatccctacctgttaagtttaaccctcaaatg--tctatggcggataaaccttagaagtggtccaccataaactctattaatt-tttt 50547097  T
Q  400 aatttcaaccgtttgat 416  Q
    |||||||||| ||||||    
T  50547098 aatttcaaccatttgat 50547114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 203 - 416
Target Start/End: Original strand, 33231385 - 33231597
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||| ||||||||| ||||| | |||    
T  33231385 taggcttattagatcatttggtcccttatttaatttcatgttttcattttagtcccacaattaataaaaatggtgttttagtccctcatctttttcaccg 33231484  T
Q  303 tttgccaaataaa-tcctaaatgttaagtttaaccc-caaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttta 400  Q
    ||||||||||||| || ||  ||||||||||||||| ||||||   ||| ||||||  ||||||| ||||||||||||||| |  ||||||||| |||||    
T  33231485 tttgccaaataaattcatacttgttaagtttaaccctcaaatg--tctatggtggacaaaccttagaagtggtccaccataaactctattaatt-tttta 33231581  T
Q  401 atttcaaccgtttgat 416  Q
    ||||||||| ||||||    
T  33231582 atttcaaccatttgat 33231597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 205 - 416
Target Start/End: Original strand, 13165494 - 13165703
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||||||||||||  ||||||||||||||||||||  |||| ||| |||||||||||||    
T  13165494 ggcttattagatcgtttggtccattatttaatttcatgttttcattttggtccc-taattaataaaaatggcgttttcgtccttcatcttttcctccgtt 13165592  T
Q  305 tgccaaataaatcc-taaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
    || ||||||||||| | | |||||||||||||  |||||  | ||| |||||| ||||||||| ||||||||||||||||    ||||||||||||||||    
T  13165593 tgtcaaataaatccttgactgttaagtttaacttcaaat--ttctatggtggaccaaccttaagagtggtccaccatagacttcattaattattttaatt 13165690  T
Q  404 tcaaccgtttgat 416  Q
    | |||||||||||    
T  13165691 taaaccgtttgat 13165703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 203 - 318
Target Start/End: Complemental strand, 10168903 - 10168788
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  10168903 taggcttattagatcgtttggtccattatttaatttcatgttttcattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccg 10168804  T
Q  303 tttgccaaataaatcc 318  Q
    ||||||||||||||||    
T  10168803 tttgccaaataaatcc 10168788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 200 - 403
Target Start/End: Complemental strand, 7708913 - 7708710
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttc--gtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttc 297  Q
    |||||||||||||||||| ||||||||||||||||||||   |||||||||||||||| | ||||||||||||| |||||||| |||||||||||||||     
T  7708913 ttttaggcttattagatcgtttggtcccttatttaattttatgtgttttcattttggttctacaattaataaaagtggcgttttagtccctcaccttttt 7708814  T
Q  298 ctccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatt 397  Q
    ||| ||||||||||||||||| || |||||| |||||| | |||| || ||| |||||| |||||||||||||||| || |||||| | |||||||| |     
T  7708813 ctctgtttgccaaataaatcccaagtgttaactttaactctaaat-at-ctatggtggaccaaccttaaaagtggtacatcatagaccttattaattttg 7708716  T
Q  398 ttaatt 403  Q
    ||||||    
T  7708715 ttaatt 7708710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 200 - 342
Target Start/End: Complemental strand, 54866753 - 54866612
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    |||| ||||||||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||| |||| ||||||| || |||||||    
T  54866753 tttttggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcc-acaattaataaaaatggtgttttagtcccttacgttttcct 54866655  T
Q  300 ccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    |||||||||||||||||| | | ||||||||||||| ||||||    
T  54866654 ccgtttgccaaataaatcatgactgttaagtttaactccaaat 54866612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 205 - 374
Target Start/End: Complemental strand, 23204071 - 23203904
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||  |||| ||| ||||| |||||||    
T  23204071 ggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacatttaataaaaatggcgttttggtccgtcatctttttctccgtt 23203972  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtc 374  Q
    |||||| ||||||| || | |||| |||||| | |||| || ||| ||||||||||||||||||||||||    
T  23203971 tgccaattaaatcccaagtattaactttaactctaaat-at-ctatggtggatcaaccttaaaagtggtc 23203904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 204 - 383
Target Start/End: Original strand, 4714016 - 4714195
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc-g 302  Q
    |||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||      
T  4714016 aggcttattagatcgtttggtcccttatttaatttcatatttttattttggtcccacaattaataaaaatggcgttttaatcccttaccttatcctcctt 4714115  T
Q  303 tttgccaaataaatcct-aaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccataga 383  Q
    ||||||||||||||| |  | | |||||||||||  ||||||   ||| |||||||||||||||| ||||||||||||||||    
T  4714116 tttgccaaataaatcatcgactattaagtttaacttcaaatg--tctatggtggatcaaccttaagagtggtccaccataga 4714195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 10167420 - 10167536
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| || ||| |||||||||  |||||||||    
T  10167420 ttaggcttattagatcgtttggtcccttatttaatttcatgttttcattttggtaccacaattaataaaaattgcattttagtccctcatattttcctcc 10167519  T
Q  302 gtttgccaaataaatcc 318  Q
    ||||| |||||||||||    
T  10167520 gtttgtcaaataaatcc 10167536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 233 - 416
Target Start/End: Complemental strand, 27851022 - 27850845
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  ||||||||||||||||||||||||||||||      |||  ||||||||  |||||||||||       |||||||| ||  |||||||||    
T  27851022 taatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcaatttttcctccgt-------ataaatcccaacagttaagttt 27850930  T
Q  333 aaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||| ||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27850929 aacctcaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaattattttaatttaaaccgtttgat 27850845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 233 - 383
Target Start/End: Complemental strand, 6349643 - 6349492
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  ||||||||||||||||||||||||||||||    | |||  ||||||||||||||| ||||||| ||||||| ||||  || |||||||||    
T  6349643 taatttcaagttttcattttggtcccacaattaataaaacgtaccttttggtccctcaccttttcttccgtttaccaaatagatcccgaacgttaagttt 6349544  T
Q  333 aaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccataga 383  Q
    ||||||||||||||  || |||||||||||||||| ||||||||||||||||    
T  6349543 aaccccaaatgatgtatatggtggatcaaccttaagagtggtccaccataga 6349492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 233 - 416
Target Start/End: Original strand, 1794437 - 1794621
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaa-atggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtt 331  Q
    |||||||  |||||||||||| || |||||||||||||| ||  | ||| | |||||||| |||||||| ||||| ||||||||||||||  ||||||||    
T  1794437 taatttcaagttttcattttgatctcacaattaataaaatataccttttga-tccctcactttttcctctgtttgtcaaataaatcctaacggttaagtt 1794535  T
Q  332 taaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||| |||||||||||  || |||||| ||||||||| |||||||||||||||| | |||||| | ||||||||| |||||||||||    
T  1794536 taatcccaaatgatgtatatggtggaccaaccttaagagtggtccaccatagaccttattaaattttttaatttaaaccgtttgat 1794621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 220 - 414
Target Start/End: Complemental strand, 15450178 - 15449984
Alignment:
Q  220 ttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcct 319  Q
    |||||||||||  |||||||  ||||||||| || ||||  | |||||||||    |||||||||| || |||||||||||||||||||||||||||| |    
T  15450178 ttggtcccttaaataatttcaggttttcattatgatcccttagttaataaaacgtacgtttaagtcgcttaccttttcctccgtttgccaaataaatctt 15450079  T
Q  320 aaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttg 414  Q
    |   |||||||||||| ||||||| || |||  ||||| ||||||||| ||||||||||||||||||||||||||  ||||||||| ||| |||||    
T  15450078 acg-gttaagtttaactccaaatgttgtctatcgtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaactgtttg 15449984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 243 - 412
Target Start/End: Complemental strand, 42810283 - 42810115
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    |||||||||||||||||||||||||||||    | |||||||||||||| |||||||||||||||||||||||||||   |||||||||||||||| |      
T  42810283 ttttcattttggtcccacaattaataaaacgtacttttaagtccctcacattttcctccgtttgccaaataaatccttggtgttaagtttaaccccca-- 42810186  T
Q  343 gatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtt 412  Q
    |||| ||| |||| | ||| ||||| ||| |||||||||||| | |||||| | ||||||||| |||||||    
T  42810185 gatgtctatggtgaaccaatcttaagagtagtccaccatagaccttattaaattttttaatttaaaccgtt 42810115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 202 - 367
Target Start/End: Complemental strand, 1588210 - 1588044
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    ||||||||||| |||| |||||||||| |  ||||||   ||||||||||| ||||||||||||||||||    ||||||| |||||||| |||||||||    
T  1588210 ttaggcttatttgatcttttggtccctcaaataattttaagttttcattttagtcccacaattaataaaatgtacgtttaaatccctcactttttcctcc 1588111  T
Q  302 gtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaa 367  Q
    |||| ||||||||||  | | |||||||||||||||||||||||| ||| ||| || ||||||||||    
T  1588110 gtttaccaaataaattatgactgttaagtttaaccccaaatgatgtctatggtagaccaaccttaaa 1588044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 243 - 317
Target Start/End: Complemental strand, 33232777 - 33232703
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  33232777 tttttattttggtcccacaattaataaaaatggcgttttagtccctcacattttcctccgtttgccaaataaatc 33232703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 208 - 319
Target Start/End: Complemental strand, 50548334 - 50548227
Alignment:
Q  208 ttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgc 307  Q
    |||||||||| |||||||||||||||    || ||||||||||||||||||||||||||||| |||  ||||| |||||||||| |||||||| ||||||    
T  50548334 ttattagatcgtttggtcccttattt----tcatgttttcattttggtcccacaattaataagaataacgttttagtccctcacattttcctctgtttgc 50548239  T
Q  308 caaataaatcct 319  Q
    ||||||||||||    
T  50548238 caaataaatcct 50548227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 243 - 416
Target Start/End: Original strand, 52239913 - 52240086
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    |||| |||||| |||||||||||||||||    |||||  || | |||  |||| ||||||||||||||||||| | ||  ||||| |||||||| ||||    
T  52239913 tttttattttgatcccacaattaataaaacgtacgttttggttcttcaggtttttctccgtttgccaaataaattccaagggttaactttaaccc-aaat 52240011  T
Q  343 gatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||| ||| |||||| ||||||||| ||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  52240012 gatgtctatggtggaccaaccttaagagtggtccaccatagatcctattaatatttttaatttaaaccgtttgat 52240086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 201 - 416
Target Start/End: Original strand, 6348149 - 6348362
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctc 300  Q
    |||||||||||| |||||  |||||||| |  |||||||  ||||||||||||||||||||||||||||||    | |||  || |||||| ||||||||    
T  6348149 tttaggcttatttgatcaaatggtccctcaaataatttcaagttttcattttggtcccacaattaataaaacgtaccttttggttcctcactttttcctc 6348248  T
Q  301 cgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttta 400  Q
     ||||| ||||||||| || |  ||||||||||||| ||||||   ||| |||||| ||||||||| ||||||||||| |||| | |||||||  || ||    
T  6348249 tgtttgtcaaataaattctgatggttaagtttaacctcaaatg--tctatggtggaccaaccttaagagtggtccaccgtagaccttattaatatttcta 6348346  T
Q  401 atttcaaccgtttgat 416  Q
    |||| |||| ||||||    
T  6348347 attttaaccctttgat 6348362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 248 - 417
Target Start/End: Complemental strand, 49344085 - 49343916
Alignment:
Q  248 attttggtcccacaattaataaaaatggcgtttaagtccct-caccttttcctccgtttgccaaataaatc-ctaaatgttaagtttaaccccaaatgat 345  Q
    ||||||||||||||||||||||||   | |||||||||||| ||| |||||||||||||||||||||||||  |  |||||||||||||||| || | ||    
T  49344085 attttggtcccacaattaataaaacgtgggtttaagtcccttcactttttcctccgtttgccaaataaatcattcgatgttaagtttaaccctaagt-at 49343987  T
Q  346 gctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
     ||| |||||||||| ||||||||| ||||||||||||    ||||||| ||| ||||| ||||||||||||    
T  49343986 -ctatggtggatcaatcttaaaagttgtccaccatagacttcattaattttttaaattttaaccgtttgata 49343916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 243 - 404
Target Start/End: Original strand, 42871131 - 42871290
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    ||||||||||| |||||||||||||||||    |||||  ||||||||| ||||||||||||||||||||||||||| | ||||||||||||  ||||||    
T  42871131 ttttcattttgatcccacaattaataaaacgtacgttttggtccctcactttttcctccgtttgccaaataaatcctgactgttaagtttaattccaaat 42871230  T
Q  343 gatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaattt 404  Q
    |   ||| ||||||||||| ||| |  | ||||||| |||| ||||||||||  ||||||||    
T  42871231 g--tctacggtggatcaacattatatatagtccaccgtagaccctattaatttctttaattt 42871290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 219 - 317
Target Start/End: Original strand, 54865117 - 54865214
Alignment:
Q  219 tttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||| | |||| |||||||||| |||||||||||||| ||||||||||    
T  54865117 tttggtcccttatttaattttatgttttcattttggtcccataattaat-aaaattgtgttttagtccctcacattttcctccgtttgtcaaataaatc 54865214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 351 - 467
Target Start/End: Original strand, 44498604 - 44498719
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatannnnnnnnnnaaaagataaccattagattatgc 450  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||           ||||||| |||||||||||| ||    
T  44498604 ggtggatcaaccttaagagtggtccaccatagatcctattaattattttaattaaaaccgtttgat-tttttttcttaaaagatgaccattagattacgc 44498702  T
Q  451 aagtctattttatctta 467  Q
    | |||||||||||||||    
T  44498703 atgtctattttatctta 44498719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 323 - 416
Target Start/End: Original strand, 56085464 - 56085555
Alignment:
Q  323 tgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| ||||||||||||||   ||| ||||||  |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  56085464 tgttaactttaaccccaaatgt--ctatggtggactaaccttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgat 56085555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 209 - 318
Target Start/End: Original strand, 53204363 - 53204472
Alignment:
Q  209 tattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgcc 308  Q
    |||||||||||||| |||||||  ||||||  ||||||||||||| || ||||||||||||||  ||||||| ||| |||||  |||| |||||||||||    
T  53204363 tattagatcatttgatcccttaaataatttaatgttttcattttgatctcacaattaataaaacaggcgttttagttcctcaattttttctccgtttgcc 53204462  T
Q  309 aaataaatcc 318  Q
    ||||||||||    
T  53204463 aaataaatcc 53204472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 436 - 555
Target Start/End: Complemental strand, 44503569 - 44503449
Alignment:
Q  436 accattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttcttcctccctc-acttcataattc 534  Q
    ||||||||||||||||||||||||||||  ||  || |||||||||||| |||||| ||||| ||||| ||||||||||| | | ||  |||||||||||    
T  44503569 accattagattatgcaagtctattttatactaaggtgaaccaacaacacataattttattttattttcctcatcttcttctttcatcttcttcataattc 44503470  T
Q  535 aacatcaccttcttcatcaca 555  Q
    ||||||| |||| ||||||||    
T  44503469 aacatcatcttcatcatcaca 44503449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 243 - 318
Target Start/End: Complemental strand, 53205563 - 53205488
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    |||||||||| ||||||||||||| ||||  ||||||| |||||||||| ||||||||||||||||||||||||||    
T  53205563 ttttcattttcgtcccacaattaaaaaaataggcgttttagtccctcactttttcctccgtttgccaaataaatcc 53205488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 202 - 335
Target Start/End: Original strand, 2310918 - 2311051
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    ||||||||||| ||||   ||||||  || ||||||||  ||||||||||||||||||||||||||||||    |||||  ||||||||  |||||||||    
T  2310918 ttaggcttatttgatccaatggtcctctaattaatttcaagttttcattttggtcccacaattaataaaacgtacgttttggtccctcagattttcctcc 2311017  T
Q  302 gtttgccaaataaatcctaaatgttaagtttaac 335  Q
    | ||||||||||||||||||  ||||| ||||||    
T  2311018 gattgccaaataaatcctaacagttaactttaac 2311051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 204 - 316
Target Start/End: Complemental strand, 52241274 - 52241162
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||| |||| ||| |||| |||||||||||||||| ||||||||||||| | |||||||||||||||    |||||   | ||||| ||||||||||||    
T  52241274 aggctcattacatcgtttgatcccttatttaatttcatgttttcattttgattccacaattaataaaacgtacgttttgattcctcatcttttcctccgt 52241175  T
Q  304 ttgccaaataaat 316  Q
    |||||||||||||    
T  52241174 ttgccaaataaat 52241162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 220 - 343
Target Start/End: Original strand, 390230 - 390353
Alignment:
Q  220 ttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcct 319  Q
    |||||||| ||  |||||||  ||||||||||||||||||||||||||||||      |||  ||||||||  | |||||||||||||||||||||||||    
T  390230 ttggtcccctaaataatttcaagttttcattttggtcccacaattaataaaacgtatattttggtccctcatttcttcctccgtttgccaaataaatcct 390329  T
Q  320 aaatgttaagtttaaccccaaatg 343  Q
     | |||||||||||||| ||||||    
T  390330 gactgttaagtttaacctcaaatg 390353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 436 - 515
Target Start/End: Original strand, 1189069 - 1189148
Alignment:
Q  436 accattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttcttc 515  Q
    |||||||||||||||||||||||||||| |||  || |||||||||||| |||||| ||||| ||||| |||||||||||    
T  1189069 accattagattatgcaagtctattttatattaaggtgaaccaacaacacataattttattttattttcctcatcttcttc 1189148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 323 - 515
Target Start/End: Original strand, 1519928 - 1520116
Alignment:
Q  323 tgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatannnnn 422  Q
    |||||| |||||||||||||| |  || ||| ||||| |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||          
T  1519928 tgttaactttaaccccaaatgtt--tatggtagatca-cctttaaagtgatccaccatagatcctattaattattttaatttaaaccgtttgat-tatat 1520023  T
Q  423 nnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttcttc 515  Q
         ||| ||| |||||||||||| | |||| ||||||||||||| || || ||||||||| |||||   | | | ||||||||||||||||    
T  1520024 ttttaaaaggatgaccattagattacgtaagtgtattttatcttacggtgaatcaacaacacctaattatgtctccctttcttcatcttcttc 1520116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 205 - 416
Target Start/End: Original strand, 40723225 - 40723435
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtg-ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    |||||| ||| |||||||||||| || ||||||| |   ||||||||||||||||| || |||||||| |   ||||  |||||| |  |||  ||||||    
T  40723225 ggcttaataggtcatttggtcccctaattaattttgcaattttcattttggtcccataactaataaaactcatgttttggtcccttaggtttatctccgt 40723324  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
      | |||||||||||  | |||||||||||||| ||||||    || |||||| ||||||||| ||||||| ||||||||||||||||||||||| |||     
T  40723325 cggtcaaataaatccatactgttaagtttaacctcaaatgta--tatggtggaccaaccttaagagtggtctaccatagatcctattaattatttaaatg 40723422  T
Q  404 tcaaccgtttgat 416  Q
    | || ||||||||    
T  40723423 ttaatcgtttgat 40723435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 37882860 - 37882944
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    |||||||  ||||||||||| ||||||||||||||||||    | |||  |||||||||||||||||||||||||||||||||||    
T  37882860 taatttcaagttttcattttagtcccacaattaataaaacgtaccttttggtccctcaccttttcctccgtttgccaaataaatc 37882944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 343
Target Start/End: Complemental strand, 4871454 - 4871343
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat-cctaaatgttaagtt 331  Q
    ||||||| ||||||||||||||| | |||||||||||||     ||||||||||| ||| |||| ||||||||| ||||||||| ||| |||||||| ||    
T  4871454 taatttcatgttttcattttggttctacaattaataaaacgtatgtttaagtcccccacgtttttctccgtttgtcaaataaatccctgaatgttaactt 4871355  T
Q  332 taaccccaaatg 343  Q
    ||| ||||||||    
T  4871354 taatcccaaatg 4871343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 316 - 417
Target Start/End: Complemental strand, 26496316 - 26496216
Alignment:
Q  316 tcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttg 414  Q
    |||||| |||||| ||||||||| ||  ||| ||| |||||| | || |||||| |||||||||||||||||||||||||||| |||||| |||||||||    
T  26496316 tcctaactgttaactttaacccccaa--atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaaccgtttg 26496219  T
Q  415 ata 417  Q
    |||    
T  26496218 ata 26496216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 19750256 - 19750202
Alignment:
Q  362 cttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  19750256 cttaaaagttgtccaccatagatcctattaattattttaatttaaatcgtttgat 19750202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 362 - 416
Target Start/End: Original strand, 19789550 - 19789604
Alignment:
Q  362 cttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || ||||||||    
T  19789550 cttaaaagttgtccaccatagatcctattaattattttaatttaaatcgtttgat 19789604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 358 - 518
Target Start/End: Original strand, 36845560 - 36845718
Alignment:
Q  358 caaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtcta 457  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||| | ||| ||||||||          ||||||| |||||| ||||| ||| || ||    
T  36845560 caacattaagagtggtccaccataggtcctattaattattttaatgtaaactgtttgata--ttttttttaaaagatgaccattggattacgcaggtgta 36845657  T
Q  458 ttttatcttactgtaaaccaacaacacgtaatttaattttct-tttcttcatcttcttcctc 518  Q
    ||||||||||| ||||  |||||||| |||| ||| |||||| ||||||||||| |||||||    
T  36845658 ttttatcttacggtaagtcaacaacaggtaa-ttatttttctctttcttcatctccttcctc 36845718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 1188869 - 1188954
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    |||||||  ||||| ||||||||||||||||||||||||    | |||  ||||||||| ||||||||||||||||||||||||||    
T  1188869 taatttcaagtttttattttggtcccacaattaataaaacgtacattttggtccctcactttttcctccgtttgccaaataaatcc 1188954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 220 - 317
Target Start/End: Original strand, 44501531 - 44501628
Alignment:
Q  220 ttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    ||||||||| |  |||||||  ||||||||| |||||||| |||||||||||    |||||||||||||||| |||| ||| ||||||||||||||||    
T  44501531 ttggtccctcaaataatttcaagttttcattctggtcccataattaataaaacgtacgtttaagtccctcacttttttctctgtttgccaaataaatc 44501628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 242 - 377
Target Start/End: Original strand, 49342654 - 49342788
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaa-tcctaaatgttaagtttaaccccaa 340  Q
    |||||||||||| |||||||||||||||||    |||||||||||||||| ||||||||| ||||  ||||||| |  |   ||||||||||||||||||    
T  49342654 gttttcattttgatcccacaattaataaaatgtacgtttaagtccctcactttttcctccatttgttaaataaattattcggtgttaagtttaaccccaa 49342753  T
Q  341 atgatgctaaggtggatcaaccttaaaagtggtccac 377  Q
    | |   |||  ||||| ||||||||||||||||||||    
T  49342754 acg--tctatagtggaccaaccttaaaagtggtccac 49342788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 346 - 522
Target Start/End: Complemental strand, 49896562 - 49896388
Alignment:
Q  346 gctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatannnnnnnnnnaaaagataaccattagat 445  Q
    |||| |||||| |||||| || ||||||||||  |||||||| |||||||||||||||| ||||||||||||          |||||| |||||||||||    
T  49896562 gctatggtggaccaacctaaagagtggtccactgtagatcctgttaattattttaatttaaaccgtttgata-ttttttattaaaagagaaccattagat 49896464  T
Q  446 tatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttcttcctccctc 522  Q
     ||||| ||||||| |||||||| ||  ||||| ||||  ||| ||||| | |  ||||||||||||||||| ||||    
T  49896463 catgcatgtctattgtatcttacagtggaccaa-aacaactaacttaatataccattcttcatcttcttccttcctc 49896388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 416
Target Start/End: Original strand, 53432060 - 53432270
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    |||||| ||| || |||| ||||||| ||||||||  |||||||||||||||||| || |||||||| |   ||||  ||||||||  ||| ||| ||||    
T  53432060 ggcttaataggtcgtttgatcccttaattaatttcaagttttcattttggtcccataagtaataaaacttatgttttggtccctcaagtttgccttcgtt 53432159  T
Q  305 tgccaaataaat-cctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
     | ||||||||| ||| |  ||||||||||||||||||||   ||| |||| | |||| |||| |||||  ||||||| | | |||||||| ||| ||||    
T  53432160 ggtcaaataaatccctgacggttaagtttaaccccaaatg--tctatggtgaaccaactttaagagtggctcaccatacaccttattaattttttcaatt 53432257  T
Q  404 tcaaccgtttgat 416  Q
    | |||||||||||    
T  53432258 ttaaccgtttgat 53432270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 1190273 - 1190197
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    |||||||||||||||||| |||||||||||    ||||||||| |||||| |||| ||| |||||||||||||||||    
T  1190273 gttttcattttggtcccataattaataaaacgtacgtttaagtacctcacttttttctctgtttgccaaataaatcc 1190197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 242 - 416
Target Start/End: Complemental strand, 11438649 - 11438476
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc-ctaaatgttaagtttaaccccaa 340  Q
    ||||| ||||||||| || |||||||||||    |||||  ||||||||| ||||||||| ||||| ||||||||| || | | ||||||||||||||||    
T  11438649 gtttttattttggtctcataattaataaaacactcgttttggtccctcactttttcctccatttgctaaataaatctctgacttttaagtttaaccccaa 11438550  T
Q  341 atgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||   ||| |||||| ||||  |  | ||||||||||||| | ||||||||||  |||||||| |||| ||||||    
T  11438549 atg--tctacggtggaccaacagtgtaggtggtccaccataaaccctattaatttctttaatttaaaccatttgat 11438476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 353 - 409
Target Start/End: Original strand, 11968657 - 11968713
Alignment:
Q  353 tggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaacc 409  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||||||||| ||||    
T  11968657 tggaccaaccttaagagtggtccatcatagatcctattaattattttaatttaaacc 11968713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 42872379 - 42872303
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcct 319  Q
    ||||||||||||||||| |||||||||||    |||||  ||||||||| |||||||||||||||||||||| ||||    
T  42872379 ttttcattttggtcccataattaataaaatgtacgttttggtccctcactttttcctccgtttgccaaataattcct 42872303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 293 - 416
Target Start/End: Complemental strand, 52138825 - 52138701
Alignment:
Q  293 ttttcctccgtttgccaaataaatcctaaatgttaagtttaacccc-aaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctatta 391  Q
    |||| ||||||| | |||| || |||| | |||||| ||||||||| |||||   ||| ||| || |||| |||| | ||||||||||||||||||||||    
T  52138825 ttttgctccgttggtcaaaaaagtcctgactgttaactttaacccctaaatgtctctatggtagaccaactttaagaatggtccaccatagatcctatta 52138726  T
Q  392 attattttaatttcaaccgtttgat 416  Q
    |||||| |||||| |||||||||||    
T  52138725 attattctaatttaaaccgtttgat 52138701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 243 - 318
Target Start/End: Complemental strand, 393718 - 393643
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    ||||||||||||||||||||||||||||||     |||  ||||||||| |||| |||||||||||||||||||||    
T  393718 ttttcattttggtcccacaattaataaaaagtatcttttggtccctcacttttttctccgtttgccaaataaatcc 393643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 243 - 342
Target Start/End: Complemental strand, 37884357 - 37884258
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    |||||||||| |||||| |||||||||||    | |||  |||| | || ||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  37884357 ttttcatttttgtcccataattaataaaatgtaccttttggtcctttactttttcctccgtttgccaaataaatccagactgttaagtttaaccccaaat 37884258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 351 - 409
Target Start/End: Original strand, 4871637 - 4871695
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaacc 409  Q
    |||||| |||||| || ||||||||||| ||||||||||||||||||||||||| ||||    
T  4871637 ggtggaccaacctaaagagtggtccaccgtagatcctattaattattttaatttaaacc 4871695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 233 - 318
Target Start/End: Original strand, 4129019 - 4129104
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    |||||||  ||||||||||||||||||||||||||||||    | |||  |||||| || |||| |||||||||||||||||||||    
T  4129019 taatttcaagttttcattttggtcccacaattaataaaatgtacattttggtcccttacttttttctccgtttgccaaataaatcc 4129104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 31965911 - 31965964
Alignment:
Q  283 gtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaacc 336  Q
    ||||||||| |||||||||||||||||||||||||||   ||||||||||||||    
T  31965911 gtccctcactttttcctccgtttgccaaataaatcctgggtgttaagtttaacc 31965964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 7053321 - 7053385
Alignment:
Q  352 gtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||| ||| ||||| |||| |||||||||||||||||||||| ||||||||| || ||||||||    
T  7053321 gtggaccaatcttaagagtgatccaccatagatcctattaatttttttaatttaaatcgtttgat 7053385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 243 - 343
Target Start/End: Complemental strand, 14524930 - 14524830
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    ||||||||||| ||||| ||||||||||| |   |||| |||| || || ||| ||||||||||| ||| ||  ||||| ||||||||||||||||||||    
T  14524930 ttttcattttgatcccataattaataaaactcatgttttagtctcttacttttccctccgtttgcaaaaaaatccctaactgttaagtttaaccccaaat 14524831  T
Q  343 g 343  Q
    |    
T  14524830 g 14524830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 243 - 319
Target Start/End: Complemental strand, 31968472 - 31968396
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcct 319  Q
    ||||||||||||||| |||||||||||||    |||||  |||| |||| |||||||| ||||||||||||||||||    
T  31968472 ttttcattttggtcctacaattaataaaacgtacgttttggtccttcactttttcctctgtttgccaaataaatcct 31968396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 40792786 - 40792862
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    ||||||||||||||||||||||||||||||    | |||  ||||||||  |||| |||||||||||||||||||||    
T  40792786 gttttcattttggtcccacaattaataaaacatacattttggtccctcagatttttctccgtttgccaaataaatcc 40792862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 383
Target Start/End: Original strand, 52963570 - 52963743
Alignment:
Q  208 ttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgc 307  Q
    ||||| ||||| |||||||  ||  |||||||  ||||||||||||||| |||||||||||||      ||||  ||||||||  |||| |||||||||     
T  52963570 ttatttgatcaattggtcctctaaataatttcaagttttcattttggtctcacaattaataaatcgtatgttttggtccctcaagtttttctccgtttgt 52963669  T
Q  308 caaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccataga 383  Q
    ||||||||||   | |||||| |||||| |||||||   ||| |||||| || |||||||||||||||| ||||||    
T  52963670 caaataaatctcgactgttaactttaactccaaatgt--ctatggtggaccagccttaaaagtggtccatcataga 52963743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 243 - 318
Target Start/End: Original strand, 1587218 - 1587293
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    |||||||||| ||| ||||||||||||||    | |||  ||||||||| ||||||||||||||||||||||||||    
T  1587218 ttttcattttagtctcacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcc 1587293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 1829779 - 1829862
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    |||||||  ||||||||||||||||||||||||||||||      ||| |||||||||| ||||||| |||||| |||||||||    
T  1829779 taatttcaagttttcattttggtcccacaattaataaaacgtatcttttagtccctcactttttcctacgtttgtcaaataaat 1829862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 23103962 - 23103917
Alignment:
Q  370 tggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  23103962 tggtccaccatagatcctattaatt-ttttaatttaaaccgtttgat 23103917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 362 - 416
Target Start/End: Original strand, 26629944 - 26629998
Alignment:
Q  362 cttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||| ||||||||||||||| ||||||||||||||||||| | ||| |||||||    
T  26629944 cttaagagtggtccaccataggtcctattaattattttaatgtaaactgtttgat 26629998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 233 - 343
Target Start/End: Original strand, 27847704 - 27847814
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  ||||| ||||||||||||||||||||||||      |||  |||||| |  ||||| ||||||||||||||||||||  |  |||||||||    
T  27847704 taatttcaagtttttattttggtcccacaattaataaaatgtatttttcggtcccttaatttttcttccgtttgccaaataaatccagacggttaagttt 27847803  T
Q  333 aaccccaaatg 343  Q
    |||||||||||    
T  27847804 aaccccaaatg 27847814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 216 - 416
Target Start/End: Complemental strand, 53435860 - 53435661
Alignment:
Q  216 tcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaa 315  Q
    ||||||| ||||||| ||||||||  |||||||||||||||||| || |||||||| |   ||||  | ||||||  ||| |||||||| | ||||||||    
T  53435860 tcatttgatcccttaattaatttcaagttttcattttggtcccataagtaataaaactcatgttttggcccctcaagtttacctccgttggtcaaataaa 53435761  T
Q  316 tcc-taaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttg 414  Q
    ||| | |  ||||||||||||   |||||   ||| ||| || ||||||||| ||||||||||| ||||    ||||||| ||| ||||| |||||||||    
T  53435760 tccttgacggttaagtttaactttaaatg--tctatggtagaccaaccttaagagtggtccaccgtagacttcattaattttttaaattttaaccgtttg 53435663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 282 - 417
Target Start/End: Complemental strand, 13166810 - 13166676
Alignment:
Q  282 agtccctcaccttttcctccgtttgccaaataaatcc-taaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccat 380  Q
    |||||||||| ||||| |||||||||||||||||||| | | |||||||||||||  ||||||   ||| | |||| ||||| ||| |||| ||||||||    
T  13166810 agtccctcactttttcatccgtttgccaaataaatccttgactgttaagtttaacttcaaatg--tctatgatggaccaaccgtaagagtgatccaccat 13166713  T
Q  381 agatcctattaattattttaatttcaaccgtttgata 417  Q
    |||    ||||||  ||| ||||| ||||||||||||    
T  13166712 agaattcattaatattttaaattttaaccgtttgata 13166676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 1831382 - 1831315
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    ||||||||| ||||   |||||||| | ||||||||  ||||||||||| ||||||||||||||||||    
T  1831382 aggcttatttgatccaatggtccctcaattaatttcaagttttcattttagtcccacaattaataaaa 1831315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 362 - 417
Target Start/End: Complemental strand, 8682809 - 8682755
Alignment:
Q  362 cttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgata 417  Q
    ||||| ||||||||| |||||||| |||||||| |||||||||||||| |||||||    
T  8682809 cttaagagtggtccatcatagatcatattaatt-ttttaatttcaaccctttgata 8682755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 351 - 414
Target Start/End: Original strand, 34326870 - 34326933
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttg 414  Q
    |||||| |||| |||| ||||||| || |||||||||||||||||||| ||||| || ||||||    
T  34326870 ggtggaccaactttaagagtggtctactatagatcctattaattatttaaattttaatcgtttg 34326933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 45535207 - 45535252
Alignment:
Q  370 tggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||    
T  45535207 tggtccaccatagatcctattaatt-ttttaatttaaactgtttgat 45535252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 316
Target Start/End: Complemental strand, 23317379 - 23317290
Alignment:
Q  227 cttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    |||||||||||   || ||| ||||||||| |||||||||||||| |  ||||| ||||| |||| ||| || | |||||||||||||||    
T  23317379 cttatttaattctttggttttattttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 23317290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 56157468 - 56157419
Alignment:
Q  352 gtggatcaaccttaaaagtggtccaccatagatcctattaattattttaa 401  Q
    ||||| ||| ||||| |||| |||||||||||||||||||||| ||||||    
T  56157468 gtggaccaatcttaagagtgttccaccatagatcctattaatttttttaa 56157419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 6e-67; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 204 - 412
Target Start/End: Complemental strand, 53614392 - 53614184
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    |||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||| |||||||||| ||||||||  |    
T  53614392 aggcttattagatcgtttggtcccttatttaatttcttgtttttattttggtcccacaattaataaaactggcgttttagtccctcacattttcctctat 53614293  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 402  Q
    ||||||||||||||| |   ||||||||||||||||||| ||| ||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  53614292 ttgccaaataaatcc-aggcgttaagtttaaccccaaataatgtctatggtggatcatccttaagagtggtccaccatagatcctagtaattattttaat 53614194  T
Q  403 ttcaaccgtt 412  Q
    ||||||||||    
T  53614193 ttcaaccgtt 53614184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 205 - 416
Target Start/End: Complemental strand, 10732247 - 10732036
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| |||| |||||||||||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  10732247 ggcttattagatcgtttgatcccttatttaatttattgttttcattttggtcccataattaataaaaatggcgttttagtccctcacattttcctccgtt 10732148  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
    | |||||||||| |  |  ||||||||||| ||||||||||| ||| |||||| ||||||| | || |||||||||||||||||||||||||||||||||    
T  10732147 taccaaataaattccgacggttaagtttaa-cccaaatgatgtctatggtggaccaacctttagagcggtccaccatagatcctattaattattttaatt 10732049  T
Q  404 tcaaccgtttgat 416  Q
    || ||||||||||    
T  10732048 tcgaccgtttgat 10732036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 205 - 512
Target Start/End: Complemental strand, 41264771 - 41264468
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||   ||||||||||||| |||||||    
T  41264771 ggcttattagattgtttggtcccttatttaatttcatgttttcattttggtctcacatttaataaaaatggcgttttgatccctcacctttttctccgtt 41264672  T
Q  305 tgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
    |||||||||||||  ||  |||||||||||    ||||||||  || ||||||||| | |||| |||||| |||||||||||||||||||||||||||||    
T  41264671 tgccaaataaatctcaaccgttaagtttaa-taaaaatgatgtttatggtggatcatctttaagagtggtacaccatagatcctattaattattttaatt 41264573  T
Q  404 tcaaccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttc 503  Q
    || ||||||||||           |||||| |||||||  |||| ||| ||||||||||||||||  |  |||| |||||| ||||||  ||||||||||    
T  41264572 tcgaccgtttgat--ttttttttaaaaagagaaccattgaattaagcaggtctattttatcttacgatgtaccaccaacacctaattt--ttttcttttc 41264477  T
Q  504 ttcatcttc 512  Q
    |||||||||    
T  41264476 ttcatcttc 41264468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 203 - 513
Target Start/End: Original strand, 35370909 - 35371211
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||| |    
T  35370909 taggcttattagatcgtttggtcccttatttaatttcatgttttcattttgatcccacaattaataaaaatggtgttttagtccttcaccttttcctctg 35371008  T
Q  303 tttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaa 401  Q
    |||| ||||||       |  ||||||||| | |||||||||||  || |||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  35371009 tttgtcaaata------gacggttaagttt-agcccaaatgatgtttatggtggaccaaccttaagagtggtccaccatagatcctattaattattttaa 35371101  T
Q  402 tttcaaccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttt 501  Q
    ||| |||  ||||||           |||||| ||||||| ||||| ||||||||||||||||||||  |  |||| |||||| ||||||  ||| ||||    
T  35371102 ttttaactttttgat-tttttttttaaaaagagaaccattggattaggcaagtctattttatcttacgatgtaccaccaacacctaattt-ttttccttt 35371199  T
Q  502 tcttcatcttct 513  Q
    ||||||||||||    
T  35371200 tcttcatcttct 35371211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 204 - 513
Target Start/End: Original strand, 26886269 - 26886575
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    |||||||||||||  ||||||||||||||||||||| | ||||||||||||||  ||||||||||||||||| ||||   |||||||| |||  ||| ||    
T  26886269 aggcttattagattgtttggtcccttatttaatttcatattttcattttggtctaacaattaataaaaatggtgttttgatccctcacgtttgtctctgt 26886368  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 402  Q
    |||||||||||||||  | |||||| || |||| |||||||||  || |||| | ||||||||| |||||||||||||| ||||||||||||||||||||    
T  26886369 ttgccaaataaatcc-gactgttaatttcaacctcaaatgatgtttacggtgaaccaaccttaagagtggtccaccataaatcctattaattattttaat 26886467  T
Q  403 ttcaaccgtttgatannnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttc-ttt 501  Q
    || |||||||||||           |||||  ||||||| ||||||||| ||||||||||||||||  |  |||| |||||| ||||||  ||||| |||    
T  26886468 ttaaaccgtttgat--tttttttttaaaagggaaccattggattatgcatgtctattttatcttacgatgtaccaccaacacctaattt--ttttcattt 26886563  T
Q  502 tcttcatcttct 513  Q
    ||||||||||||    
T  26886564 tcttcatcttct 26886575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 203 - 328
Target Start/End: Original strand, 27837916 - 27838041
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||| |||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  27837916 taggtttattagatcgtttgatcccttatttaatttcatgttttcattttggtcccacaattaataaatatggcgttttagtccctcaccttttcctccg 27838015  T
Q  303 tttgccaaataaatcctaaatgttaa 328  Q
    ||||||||||||||||| | ||||||    
T  27838016 tttgccaaataaatcctgactgttaa 27838041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 243 - 416
Target Start/End: Original strand, 3208520 - 3208693
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    ||||||||||||||||| |||||||||||    |||||   ||||| |  |||||||||||||| |||||||||||| |  |||||||||||||||||||    
T  3208520 ttttcattttggtcccataattaataaaacgtacgttttgatcccttattttttcctccgtttgtcaaataaatccttaccgttaagtttaaccccaaat 3208619  T
Q  343 gatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||  || |||||| ||||||||| |||||||||||||| ||||||||||||||| |||||| |||||||||||    
T  3208620 gatattatggtggaccaaccttaagagtggtccaccataaatcctattaattattataatttaaaccgtttgat 3208693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 193 - 374
Target Start/End: Complemental strand, 26887685 - 26887506
Alignment:
Q  193 taattccttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcacc 292  Q
    |||||| | |||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  || ||||||||| |    
T  26887685 taattcttgttaggcttattagatcgtttggtcccttatttaatttcatgttttcatttttgtcccacaattaataaaaatggcaatttagtccctcatc 26887586  T
Q  293 ttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtc 374  Q
    |||||||| |||| |||||||||| || |  ||||| ||||||  ||||| || ||| |||| | |||||||||||||||||    
T  26887585 ttttcctctgtttcccaaataaattctgacggttaactttaacttcaaat-at-ctatggtgtaccaaccttaaaagtggtc 26887506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 200 - 328
Target Start/End: Complemental strand, 35372284 - 35372153
Alignment:
Q  200 ttttaggcttattagatcatttggtccc---ttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcacctttt 296  Q
    |||| ||||||||||||| |||||||||   || ||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  35372284 tttttggcttattagatcgtttggtccccccttttttaatttcatgttttcattttggtctcacaattaataaaaatggcgttttagtccctcacctttt 35372185  T
Q  297 cctccgtttgccaaataaatcctaaatgttaa 328  Q
    |||| |||||||||||||||||| | ||||||    
T  35372184 cctctgtttgccaaataaatccttactgttaa 35372153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 203 - 374
Target Start/End: Original strand, 41263634 - 41263803
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| ||| |||||||||| |||  |||| ||| ||||| |||||    
T  41263634 taggcttattagatcgtttggtcccttatttaatttcatattttcattttggtcccacatttattaaaaatggcattttggtccgtcatctttttctccg 41263733  T
Q  303 tttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtc 374  Q
    |||| ||| ||||||| || |||||| |||||| | |||| || ||| ||||||||||||||||||||||||    
T  41263734 tttgtcaattaaatcccaagtgttaactttaactctaaat-at-ctatggtggatcaaccttaaaagtggtc 41263803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 200 - 404
Target Start/End: Original strand, 10730878 - 10731080
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    ||||||||||||| |||| |||| ||||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||  |||| |||| |||| ||    
T  10730878 ttttaggcttattggatcgtttgatcccttattcaatttcttgttttcattttggtcccataattaataaaaatggcattttggtccttcacttttttct 10730977  T
Q  300 ccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttt 399  Q
    |||||||||||||||||||  | |||||| ||||||  ||||||   ||| |||| | ||||||||||||||||| | |||| | | |||||||| | ||    
T  10730978 ccgtttgccaaataaatcccgactgttaactttaacttcaaatg--tctatggtgaaccaaccttaaaagtggtctatcatataccttattaattttgtt 10731075  T
Q  400 aattt 404  Q
    |||||    
T  10731076 aattt 10731080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 233 - 513
Target Start/End: Complemental strand, 34819374 - 34819096
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  |||||||||||| ||| |||||||||||||    ||||||||||| |||| ||||| || ||||||||||||  ||||   ||||||||||    
T  34819374 taatttcaagttttcattttgatcctacaattaataaaacgtacgtttaagtccttcactttttc-tctgtttgccaaatag-tccttgctgttaagttt 34819277  T
Q  333 aaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatannnnnnnnnnaaaa 431  Q
    |||||||||||||| |||  ||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| ||||| |           ||||    
T  34819276 aaccccaaatgatgtctatagtggatcaaccttaagagtggtccaccatagatcctattacttattttaatttaaactgtttgttttttttataaaaaaa 34819177  T
Q  432 gataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaa-tttaattttcttttcttcatcttct 513  Q
    |  ||||||| ||||| |||||||||||||||||||  ||  |||| |||||| ||| |||  ||||||||||||||||||||    
T  34819176 g--aaccattggattaggcaagtctattttatcttatggtgtaccaccaacacctaattttttttttcttttcttcatcttct 34819096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 200 - 318
Target Start/End: Original strand, 53612864 - 53612982
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    |||| ||||||||||| | |||  |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||||||| |||||||    
T  53612864 tttttggcttattagaacgtttaatcccttatttaatttcttgttttcattttggtcccataattaataaaaatggcgttttattccctcacattttcct 53612963  T
Q  300 ccgtttgccaaataaatcc 318  Q
    | |||||||||||||||||    
T  53612964 ctgtttgccaaataaatcc 53612982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 233 - 416
Target Start/End: Complemental strand, 38242606 - 38242423
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  |||||||||||| |||||||||||||||||    | |||  ||||||||| ||||  || |||||||||||||||||| |  |||||||||    
T  38242606 taatttcaagttttcattttgatcccacaattaataaaacgtaccttttggtccctcacttttttatctgtttgccaaataaatcctcacagttaagttt 38242507  T
Q  333 aaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||| | |||||||| ||| |||||| ||||||||| |||||||||||||| || ||||||||||||||||||| |||||||||||    
T  38242506 aactc-aaatgatgtctatggtggaccaaccttaagagtggtccaccataaattctattaattattttaatttaaaccgtttgat 38242423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 250 - 513
Target Start/End: Complemental strand, 27841783 - 27841519
Alignment:
Q  250 tttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatgcta 349  Q
    |||||||||||||||||||||||| || ||| ||||| |||||||||| | |||||| ||||||||| |  |  ||||||||||| |  |||| ||| |     
T  27841783 tttggtcccacaattaataaaaatagctttttagtccttcaccttttctttcgtttgtcaaataaattccgatggttaagtttaatct-aaattatgttt 27841685  T
Q  350 a-ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatannnnnnnnnnaaaagataaccattagattat 448  Q
    | |||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||||           |||||| ||| ||| |||||     
T  27841684 atggtggaccaaccttaagagtggtccaccatagatcctaataattattttaattttaactgtttgattttaaaaaaaaaaaagagaactattggattag 27841585  T
Q  449 gcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttc-ttttcttcatcttct 513  Q
    ||||||||||||||||||||  |  |||| |||||| ||||||  ||||| |||||||||||||||    
T  27841584 gcaagtctattttatcttacgatgtaccaccaacacctaatttttttttctttttcttcatcttct 27841519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 18458747 - 18458663
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatc 317  Q
    |||||||  ||||| |||||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||||||||||    
T  18458747 taatttcaagtttttattttggtcccacaattaataaaacttgcgttttagtccctcactttttcctccgtttgccaaataaatc 18458663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 202 - 317
Target Start/End: Original strand, 50809416 - 50809531
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    ||||||||| ||||||  |||||||||||  |||||||   ||||||||||||||||| |||||||||||    ||||| |||||||||| |||||||||    
T  50809416 ttaggcttaatagatctattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctcc 50809515  T
Q  302 gtttgccaaataaatc 317  Q
    ||||||||||||||||    
T  50809516 gtttgccaaataaatc 50809531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 50866446 - 50866331
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    ||||||||| ||||||  |||||||||||  |||||||   ||||||||||||||||| |||||||||||    ||||| |||||||||| |||||||||    
T  50866446 ttaggcttaatagatctattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcactttttcctcc 50866347  T
Q  302 gtttgccaaataaatc 317  Q
    ||||||||||||||||    
T  50866346 gtttgccaaataaatc 50866331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 242 - 416
Target Start/End: Original strand, 42684911 - 42685084
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc-taaatgttaagtttaaccccaa 340  Q
    |||||||||||||| ||| ||| ||||||| || ||||| |||||||||  |||| ||  |||| |||||||||||| | | ||||||||||||||||||    
T  42684911 gttttcattttggttccataatgaataaaactgacgttttagtccctcatttttttctatgtttaccaaataaatccttgactgttaagtttaaccccaa 42685010  T
Q  341 atgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||   ||| |||| | ||| ||||| |||||||||||||| | | |||||| | ||||||||| |||||||||||    
T  42685011 atg--tctatggtgaaccaagcttaagagtggtccaccataaaccttattaaattttttaatttaaaccgtttgat 42685084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 223 - 416
Target Start/End: Complemental strand, 12108083 - 12107887
Alignment:
Q  223 gtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataa---atcct 319  Q
    ||||||||  |||||||  ||||||||||||||||||||| ||||||||      |||  ||||||||| ||||||||||||||||||||||   |||      
T  12108083 gtcccttaaataatttcaagttttcattttggtcccacaactaataaaacatatattttggtccctcactttttcctccgtttgccaaataataaatcac 12107984  T
Q  320 aaatgttaagtttaaccccaaatgatgctaa-ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
       |||||| ||||||||||||||||  | | |||||| |||||||||||||||||||||||||| ||||||  || ||||||| | |||||||||||    
T  12107983 gggtgttaaatttaaccccaaatgatatttatggtggaccaaccttaaaagtggtccaccatagaccctatt-ttttttttaatataaaccgtttgat 12107887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 204 - 343
Target Start/End: Original strand, 38240903 - 38241042
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||| ||||  ||||||||||   |||||||   |||| ||||||||||||||||||||||||    ||||||||||| |||  |||||||||||    
T  38240903 aggcttatttgatccattggtcccttgaataatttcaaatttttattttggtcccacaattaataaaacgtacgtttaagtccttcagattttcctccgt 38241002  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatg 343  Q
    |||||||||||||||    ||||||||||||| |||||||    
T  38241003 ttgccaaataaatcccggctgttaagtttaactccaaatg 38241042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 203 - 317
Target Start/End: Complemental strand, 50810954 - 50810840
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||||||| ||||||  |||||||||||  |||||||   ||||||||||||||||| |||||||||||    ||||| |||||||||  ||||||||||    
T  50810954 taggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccg 50810855  T
Q  303 tttgccaaataaatc 317  Q
    |||||||||||||||    
T  50810854 tttgccaaataaatc 50810840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 203 - 317
Target Start/End: Original strand, 50864910 - 50865024
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||||||| ||||||  |||||||||||  |||||||   ||||||||||||||||| |||||||||||    ||||| |||||||||  ||||||||||    
T  50864910 taggcttaatagatccattggtcccttaaataatttcaatttttcattttggtcccataattaataaaacacacgttttagtccctcattttttcctccg 50865009  T
Q  303 tttgccaaataaatc 317  Q
    |||||||||||||||    
T  50865010 tttgccaaataaatc 50865024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 203 - 416
Target Start/End: Complemental strand, 3455745 - 3455533
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||||||| ||| ||||||||||||  | ||||||||  ||||||||||||||| || || |||||||| |   ||||  |||| |||  |||  |||||    
T  3455745 taggcttaataggtcatttggtccccgaattaatttcaagttttcattttggtctcataactaataaaactcatgttttggtccttcatgtttgtctccg 3455646  T
Q  303 tttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 402  Q
    |  | |||||||||||| |  ||||| |||||||||  |  ||| || |||||| ||||||||| |||||||||||||||||| ||||||||| ||||||    
T  3455645 tcagtcaaataaatcctgacagttaactttaaccccccaaaatgttatggtggaccaaccttaagagtggtccaccatagatcatattaatta-tttaat 3455547  T
Q  403 ttcaaccgtttgat 416  Q
     |||||| ||||||    
T  3455546 ctcaaccctttgat 3455533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 37736181 - 37736089
Alignment:
Q  223 gtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaa 315  Q
    ||||||||  ||||||| |||||||||||||||| ||||||||||||||    ||||| |||||||||| |||| ||||||||||||||||||    
T  37736181 gtcccttaaataatttcatgttttcattttggtctcacaattaataaaacgtacgttttagtccctcacttttttctccgtttgccaaataaa 37736089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 42686266 - 42686151
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    ||||||||||||||||||||| |||||||  |||||   |||||| |||||| ||| |||||||||||||  ||| ||| |||||||||| |||| |||     
T  42686266 ttaggcttattagatcatttgatcccttaaataattctatgtttttattttgatcctacaattaataaaacaggcattttagtccctcacttttttctct 42686167  T
Q  302 gtttgccaaataaatc 317  Q
    ||||| ||||||||||    
T  42686166 gtttgtcaaataaatc 42686151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 200 - 374
Target Start/End: Original strand, 53622655 - 53622830
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    ||||||||||||||||||  || ||||||   |||||||    | |||||||||||| |||||||||||||||     |||   ||||| |  |||||||    
T  53622655 ttttaggcttattagatccattcgtccctcgattaattttcattattcattttggtcgcacaattaataaaaaatatattttgatcccttagattttcct 53622754  T
Q  300 ccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtc 374  Q
    ||||||||||| ||||||| ||  ||||||||||||||||||||||| ||| |||||| ||||||||| |||||||    
T  53622755 ccgtttgccaactaaatcccaacggttaagtttaaccccaaatgatgtctatggtggaccaaccttaagagtggtc 53622830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 205 - 319
Target Start/End: Complemental strand, 3817381 - 3817267
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| ||||||||| ||  ||||||| ||||||||||||||||||| | ||||||||| || ||  | ||||||||| ||||| |  ||||    
T  3817381 ggcttattagatcgtttggtcccctaactaatttcatgttttcattttggtcccatatttaataaaagtgtcgaattagtccctcaacttttgcgacgtt 3817282  T
Q  305 tgccaaataaatcct 319  Q
    ||||||| |||||||    
T  3817281 tgccaaaaaaatcct 3817267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 358 - 416
Target Start/End: Original strand, 10338888 - 10338946
Alignment:
Q  358 caaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  10338888 caaccttaagagtggtccaccatagatcctattaattattttaattttaactgtttgat 10338946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 351 - 416
Target Start/End: Complemental strand, 14745173 - 14745108
Alignment:
Q  351 ggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| ||||||||| |||||| |||||||||||||||||||||||||||||| ||| |||||||    
T  14745173 ggtggaccaaccttaagagtggttcaccatagatcctattaattattttaatttaaactgtttgat 14745108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 40244183 - 40244294
Alignment:
Q  203 taggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccg 302  Q
    |||||||||| ||||  |||||||||||  |||||||  ||||||||||||||| ||||||||||||||    | |||  ||||||||  ||||||||||    
T  40244183 taggcttatttgatccattggtcccttaaataatttcaagttttcattttggtctcacaattaataaaacgtacattttggtccctcaaattttcctccg 40244282  T
Q  303 tttgccaaataa 314  Q
    ||||||||||||    
T  40244283 tttgccaaataa 40244294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 233 - 416
Target Start/End: Original strand, 53420342 - 53420525
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaa--atgttaagt 330  Q
    ||||||| | ||||||||||||||| |||||||||||||    |||||  ||||||||| |||| ||||||||  |||||||||||  |   | ||||||    
T  53420342 taatttcatattttcattttggtcctacaattaataaaacgtacgttttggtccctcacttttttctccgtttatcaaataaatccctagtctattaagt 53420441  T
Q  331 ttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||| ||||||   ||| |||||| |||| ||||||||| ||||||||||| | ||||||   ||||||||| ||| |||||||    
T  53420442 ttaaccacaaatg--tctatggtggaccaactttaaaagtgatccaccatagaccttattaaactttttaatttaaactgtttgat 53420525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 358 - 416
Target Start/End: Original strand, 10301084 - 10301142
Alignment:
Q  358 caaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||    
T  10301084 caaccttaagagtgatccaccatagatcctattaattattttaatttaaactgtttgat 10301142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 243 - 383
Target Start/End: Complemental strand, 23443537 - 23443398
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    ||||||||||||||||| |||||||||||    | ||||||||| ||| |||||| || |||||||||||||||| |   |||||||||||||||| ||     
T  23443537 ttttcattttggtcccaaaattaataaaacgtacctttaagtccttcatcttttcttctgtttgccaaataaatcattggtgttaagtttaacccccaa- 23443439  T
Q  343 gatg-ctaaggtggatcaaccttaaaagtggtccaccataga 383  Q
     ||| |||  ||| ||||| ||||||||| ||||||||||||    
T  23443438 -atgtctattgtgaatcaatcttaaaagtagtccaccataga 23443398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 233 - 319
Target Start/End: Original strand, 40364345 - 40364431
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcct 319  Q
    |||||||  |||||||||||||||| | |||||||||||    |||||||||||||||  |||| ||||||||||||||||||||||    
T  40364345 taatttcaagttttcattttggtcctaaaattaataaaatgtacgtttaagtccctcatttttttctccgtttgccaaataaatcct 40364431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 220 - 318
Target Start/End: Original strand, 41544675 - 41544773
Alignment:
Q  220 ttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    ||||||| |||  |||||||  |||||||||||||||| | |||||||| ||    |||||||||||||||| |||||||| |||||||||||||||||    
T  41544675 ttggtccattaaataatttcaagttttcattttggtcctataattaatataacgtacgtttaagtccctcactttttcctctgtttgccaaataaatcc 41544773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 232 - 412
Target Start/End: Original strand, 34818111 - 34818289
Alignment:
Q  232 ttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtt 331  Q
    ||||||||  ||||||||||||||||||||||||||||||     | ||  ||||||||  ||||||||| |||||||||||||||| ||  ||||| ||    
T  34818111 ttaatttcaagttttcattttggtcccacaattaataaaacgtatgatttggtccctcagattttcctccatttgccaaataaatcccaatagttaactt 34818210  T
Q  332 taaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtt 412  Q
    ||||   |||||   ||| ||| |||||||||||||| || || | |||||| | |||||||| | ||||||| |||||||    
T  34818211 taactttaaatg--tctatggttgatcaaccttaaaaatgatctatcatagaccttattaattttgttaattttaaccgtt 34818289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 293 - 409
Target Start/End: Original strand, 36175349 - 36175463
Alignment:
Q  293 ttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaa 392  Q
    |||| |||||||||||||||||||||  | |||||||||||||||||||||   ||| | ||||||||| ||| |  | |||||||||| ||||||||||    
T  36175349 tttttctccgtttgccaaataaatccggactgttaagtttaaccccaaatg--tctatgatggatcaacattatatatagtccaccatatatcctattaa 36175446  T
Q  393 ttattttaatttcaacc 409  Q
    ||  |||||||| ||||    
T  36175447 tttctttaatttaaacc 36175463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 316 - 417
Target Start/End: Original strand, 49379811 - 49379911
Alignment:
Q  316 tcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttg 414  Q
    |||||| |||||| ||||||||| ||  ||| ||| |||||| | || |||||| |||||||||||||||||||||||||||| |||||| ||| |||||    
T  49379811 tcctaactgttaactttaacccccaa--atgtctatggtggaccgactttaaaaatggtccaccatagatcctattaattattctaatttaaactgtttg 49379908  T
Q  415 ata 417  Q
    |||    
T  49379909 ata 49379911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 3811525 - 3811639
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    ||||||||||||| |||||| || ||  ||||||| ||||||||||||||||||| | ||||||||| || ||  | ||||||||| ||||| |   |||    
T  3811525 ggcttattagatcgtttggtaccctaactaatttcatgttttcattttggtcccatatttaataaaagtgtcgaattagtccctcaacttttgccaagtt 3811624  T
Q  305 tgccaaataaatcct 319  Q
    ||||||| |||||||    
T  3811625 tgccaaaaaaatcct 3811639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 359 - 409
Target Start/End: Original strand, 48083378 - 48083428
Alignment:
Q  359 aaccttaaaagtggtccaccatagatcctattaattattttaatttcaacc 409  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  48083378 aaccttaagagtggtctaccatagatcctattaattattttaatttaaacc 48083428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 53194574 - 53194520
Alignment:
Q  362 cttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    |||||||||| |||||||||||| ||||||||||||||| ||| |||||||||||    
T  53194574 cttaaaagtgatccaccatagattctattaattattttattttaaaccgtttgat 53194520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 53194960 - 53194875
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    |||||||  |||||||||||||||||| |||||||||||    |||||  ||||||||| ||||||||  ||||||||||||||||    
T  53194960 taatttcaagttttcattttggtcccataattaataaaacgtacgttttggtccctcactttttcctctatttgccaaataaatcc 53194875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 365 - 413
Target Start/End: Original strand, 13621077 - 13621125
Alignment:
Q  365 aaaagtggtccaccatagatcctattaattattttaatttcaaccgttt 413  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||||||    
T  13621077 aaaaatggtccaccatagatcctattaattattctaatttaaaccgttt 13621125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 343
Target Start/End: Original strand, 18442278 - 18442385
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  ||||||||||||||||||||||||||||||    ||||| ||||| |||  ||||||||   ||||||||||||| |    ||||||||||    
T  18442278 taatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc---ttgccaaataaattcatgttgttaagttt 18442374  T
Q  333 aaccccaaatg 343  Q
    |||||||||||    
T  18442375 aaccccaaatg 18442385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 343
Target Start/End: Original strand, 19487352 - 19487459
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  ||||||||||||||||||||||||||||||    ||||| ||||| |||  ||||||||   ||||||||||||| |    ||||||||||    
T  19487352 taatttcaagttttcattttggtcccacaattaataaaacccacgttttagtccatcattttttcctc---ttgccaaataaattcatgttgttaagttt 19487448  T
Q  333 aaccccaaatg 343  Q
    |||||||||||    
T  19487449 aaccccaaatg 19487459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 232 - 271
Target Start/End: Complemental strand, 36176598 - 36176559
Alignment:
Q  232 ttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  36176598 ttaatttcatgttttcattttggtcccacaattaataaaa 36176559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 428 - 514
Target Start/End: Original strand, 50809567 - 50809653
Alignment:
Q  428 aaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttct-tttcttcatcttctt 514  Q
    |||||| ||||||| ||||| ||| |||||||||||||||| || || ||||||||  ||| |||||||||| |||||||||||||||    
T  50809567 aaaagagaaccattggattacgcatgtctattttatcttacggtgaatcaacaacatctaa-ttaattttctctttcttcatcttctt 50809653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 428 - 514
Target Start/End: Complemental strand, 50866295 - 50866209
Alignment:
Q  428 aaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttct-tttcttcatcttctt 514  Q
    |||||| ||||||| ||||| ||| |||||||||||||||| || || ||||||||  ||| |||||||||| |||||||||||||||    
T  50866295 aaaagagaaccattggattacgcatgtctattttatcttacggtgaatcaacaacatctaa-ttaattttctctttcttcatcttctt 50866209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 283 - 342
Target Start/End: Original strand, 53187634 - 53187693
Alignment:
Q  283 gtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    ||||||||| ||||| ||||||||||||||||||||  |  |||||||||||||||||||    
T  53187634 gtccctcactttttcttccgtttgccaaataaatccctaccgttaagtttaaccccaaat 53187693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 317
Target Start/End: Original strand, 37735299 - 37735416
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    ||||||||||||| ||||  ||||||| |||  ||||||   |||||||||||||||||| |||||||||||     |||| |||||||||  |||| ||    
T  37735299 ttttaggcttatttgatccattggtcctttaaataattttaagttttcattttggtcccataattaataaaacgtatgttttagtccctcatttttttct 37735398  T
Q  300 ccgtttgccaaataaatc 317  Q
     |||||| ||||||||||    
T  37735399 tcgtttgtcaaataaatc 37735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 227 - 316
Target Start/End: Original strand, 44182302 - 44182391
Alignment:
Q  227 cttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    |||||||||||   || ||| ||||||||| |||||||||||||| |  ||||| ||||| |||| |||||| | |||||||||||||||    
T  44182302 cttatttaattctttggttttattttggtctcacaattaataaaactcacgttttagtccttcactttttccacagtttgccaaataaat 44182391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 242 - 318
Target Start/End: Complemental strand, 53421842 - 53421766
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    ||||||||||| |||| |||||||||||||    |||||  ||||||||| |||| ||| |||||||||||||||||    
T  53421842 gttttcattttagtcctacaattaataaaacgtacgttttggtccctcacttttttctctgtttgccaaataaatcc 53421766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 514
Target Start/End: Complemental strand, 50810796 - 50810718
Alignment:
Q  436 accattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttct-tttcttcatcttctt 514  Q
    |||||| ||||| ||| |||||||||||||||| || || ||||||||  ||| |||||||||| |||||||||||||||    
T  50810796 accattggattacgcatgtctattttatcttacggtgaatcaacaacatctaa-ttaattttctctttcttcatcttctt 50810718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 514
Target Start/End: Original strand, 50865068 - 50865146
Alignment:
Q  436 accattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttct-tttcttcatcttctt 514  Q
    |||||| ||||| ||| |||||||||||||||| || || ||||||||  ||| |||||||||| |||||||||||||||    
T  50865068 accattggattacgcatgtctattttatcttacggtgaatcaacaacatctaa-ttaattttctctttcttcatcttctt 50865146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 370 - 404
Target Start/End: Complemental strand, 28909561 - 28909527
Alignment:
Q  370 tggtccaccatagatcctattaattattttaattt 404  Q
    ||||||||||||||||||||||||| |||||||||    
T  28909561 tggtccaccatagatcctattaatttttttaattt 28909527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 370 - 412
Target Start/End: Original strand, 37415157 - 37415199
Alignment:
Q  370 tggtccaccatagatcctattaattattttaatttcaaccgtt 412  Q
    |||||||||||||||| |||||||| ||||||||| |||||||    
T  37415157 tggtccaccatagatcttattaattcttttaattttaaccgtt 37415199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 44602997 - 44602952
Alignment:
Q  370 tggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||| ||||||||||||||||||| ||||||||| |||||||||||    
T  44602997 tggtctaccatagatcctattaatt-ttttaatttaaaccgtttgat 44602952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 355 - 401
Target Start/End: Complemental strand, 55328272 - 55328227
Alignment:
Q  355 gatcaaccttaaaagtggtccaccatagatcctattaattattttaa 401  Q
    |||||||||||||||||||||||| || || ||||||||||||||||    
T  55328272 gatcaaccttaaaagtggtccaccgtatat-ctattaattattttaa 55328227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 316
Target Start/End: Complemental strand, 3808069 - 3807980
Alignment:
Q  227 cttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    |||||||||||   || ||| ||||||||| |||||||||||||| |  ||||| ||||| |||| |||| | | |||||||||||||||    
T  3808069 cttatttaattctttggttttattttggtctcacaattaataaaactcacgttttagtccttcacttttttcacagtttgccaaataaat 3807980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 316
Target Start/End: Complemental strand, 37981751 - 37981662
Alignment:
Q  227 cttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    |||||||||||   || ||| ||||||||| |||||||||||||| |  ||||| ||||| |||| ||| || | |||||||||||||||    
T  37981751 cttatttaattctttggttttattttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 37981662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 316
Target Start/End: Original strand, 44175604 - 44175693
Alignment:
Q  227 cttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    |||||||||||   || ||| ||||||||| |||||||||||||| |  ||||| ||||| |||| ||| || | |||||||||||||||    
T  44175604 cttatttaattctttggttttattttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 44175693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 109; Significance: 2e-54; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 201 - 416
Target Start/End: Complemental strand, 54307 - 54091
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctc 300  Q
    |||||||||||| ||||  ||||||||| |  |||||||  ||||| ||||||||| ||||||||||||||   ||||||  ||||||||  ||||||||    
T  54307 tttaggcttatttgatccattggtccctcaaataatttcaagttttaattttggtcgcacaattaataaaacgtgcgttttggtccctcaaattttcctc 54208  T
Q  301 cgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttt 399  Q
    ||||||||||||||||| | | |||||||| ||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  54207 cgtttgccaaataaatcgtgactgttaagtataaccccaaatgatgtctatggtggaccaaccttaaaagtggtccaccatagatcctattaattatttt 54108  T
Q  400 aatttcaaccgtttgat 416  Q
    ||||| ||| |||||||    
T  54107 aatttaaactgtttgat 54091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 232 - 318
Target Start/End: Original strand, 52617 - 52703
Alignment:
Q  232 ttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    ||||||||  |||||||||||| |||||||||||||||||    |||||  ||||||||  |||| |||||||||||||||||||||    
T  52617 ttaatttcaagttttcattttgatcccacaattaataaaatgtacgttttggtccctcagatttttctccgtttgccaaataaatcc 52703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 242 - 513
Target Start/End: Complemental strand, 43656 - 43387
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaa 341  Q
    ||||| |||||||||||| |||||||||||     ||||||||||||||| |||||||||||||||||||||| |||| |  |||||||||||||||||     
T  43656 gtttttattttggtcccataattaataaaacgtatgtttaagtccctcactttttcctccgtttgccaaataagtcctgacggttaagtttaaccccaag 43557  T
Q  342 tgatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgatannnnnnnnnnaaaagataaccat 440  Q
    ||||| ||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||           |||||| ||||||    
T  43556 tgatgtctatggtggaccaatcttaagagtggtccaccatagatcctattaattattttaatttaaaccgtttgat---tttttttaaaaagagaaccat 43460  T
Q  441 tagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttct 513  Q
    | ||||| ||||||||||||||||| ||  || | || | |||| ||||||  ||| ||||||||||||||||    
T  43459 ttgattaggcaagtctattttatctaacgatatatcaccgacacctaattttttttccttttcttcatcttct 43387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 84; Significance: 2e-39; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 243 - 416
Target Start/End: Complemental strand, 125313 - 125138
Alignment:
Q  243 ttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaat 342  Q
    |||||||||||||||||||||||||||||    | |||  ||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  125313 ttttcattttggtcccacaattaataaaacgtaccttttggtccctcactttttcctccgtttgccaaataaatcctaacggttaagtttaaccccaaat 125214  T
Q  343 gatg-ctaaggtggatcaaccttaaaagtggtccaccatagatcctatt-aattattttaatttcaaccgtttgat 416  Q
    ||||  || | |||| |||||||||||||||||||||||||| | |||| |||| ||||||||| |||| ||||||    
T  125213 gatgtatatgatggaccaaccttaaaagtggtccaccatagaccttattaaatttttttaatttaaaccctttgat 125138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 233 - 392
Target Start/End: Original strand, 123995 - 124152
Alignment:
Q  233 taatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagttt 332  Q
    |||||||  ||||||||||||||||||||||||||||||    | |||  ||||||||| |||||||| |||||||||||||||||| |  |||||||||    
T  123995 taatttcaagttttcattttggtcccacaattaataaaacgtacattttggtccctcactttttcctctgtttgccaaataaatccttacggttaagttt 124094  T
Q  333 aaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaa 392  Q
    |||||||||| || ||| |||||| ||||||||| |||||||||||||||||| ||||||    
T  124095 aaccccaaat-at-ctatggtggaccaaccttaagagtggtccaccatagatcgtattaa 124152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 83; Significance: 7e-39; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 200 - 416
Target Start/End: Complemental strand, 63254 - 63039
Alignment:
Q  200 ttttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcct 299  Q
    ||||||| |||||||||| ||||||||   |  |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| ||    
T  63254 ttttaggtttattagatcgtttggtcctccaaataatttcgtgttttcattttggtcccacaattaataaagatggcgttttagtccctcacatttttct 63155  T
Q  300 ccgtttgccaaataaat-cctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattt 398  Q
    ||||||||||||||||| ||| | |||||||||||||  ||||||   ||| | |||||||| ||||| | |||||||||||| |    ||||||| |||    
T  63154 ccgtttgccaaataaatccctgactgttaagtttaacttcaaatg--tctatgatggatcaatcttaagaatggtccaccataaacttcattaatttttt 63057  T
Q  399 taatttcaaccgtttgat 416  Q
     ||||| |||||||||||    
T  63056 aaattttaaccgtttgat 63039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 202 - 317
Target Start/End: Original strand, 61846 - 61961
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    |||||||||||||| | ||||||||| ||  ||||||| |||||||||||||||| || |||||||||||||||||||| ||||||||| |||||| |||    
T  61846 ttaggcttattagaacgtttggtcccctaaataatttcatgttttcattttggtctcataattaataaaaatggcgttttagtccctcatcttttcttcc 61945  T
Q  302 gtttgccaaataaatc 317  Q
    ||||||||||||||||    
T  61946 gtttgccaaataaatc 61961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 70; Significance: 4e-31; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 247 - 416
Target Start/End: Original strand, 108553 - 108722
Alignment:
Q  247 cattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcctaaatgttaagtttaaccccaaatgatg 346  Q
    ||||||| ||||| |||||||||||    |||||   |||||||  ||||||||| |||||||||||||||||    ||||||||||||||||||| ||     
T  108553 cattttgatcccataattaataaaacgtacgttttgatccctcattttttcctccatttgccaaataaatccttgcagttaagtttaaccccaaataata 108652  T
Q  347 ctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
     || |||||| ||||||||||||||||||||||||||| |||||||||||| |||||| |||| ||||||    
T  108653 ttatggtggaccaaccttaaaagtggtccaccatagatgctattaattattataatttaaaccttttgat 108722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 221 - 416
Target Start/End: Complemental strand, 109847 - 109654
Alignment:
Q  221 tggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatccta 320  Q
    ||||||||||  |||||||  |||||||||||||||| |||||||||||||    | ||| |||||||||| |||| |||  |||||||||| ||||| |    
T  109847 tggtcccttaaataatttcaagttttcattttggtcctacaattaataaaacgtacattttagtccctcacttttttctcaatttgccaaatgaatccca 109748  T
Q  321 aatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    | | |||| ||||||  ||||||    || |||||| ||||||||||| | ||||| | |||| | |||||||| | ||||||| |||| ||||||    
T  109747 actattaactttaacttcaaatg--tatatggtggaccaaccttaaaaatagtccatcgtagaccttattaattttgttaattttaaccatttgat 109654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 68; Significance: 6e-30; HSPs: 2)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 208 - 342
Target Start/End: Complemental strand, 858 - 726
Alignment:
Q  208 ttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgc 307  Q
    |||||||||| |||||||| |||||||||||| |||||| ||||||||||| ||||||||||||||||||||  || |||  |  |||||||||||||||    
T  858 ttattagatcgtttggtcctttatttaatttcatgtttttattttggtccctcaattaataaaaatggcgttatagaccccaa--ttttcctccgtttgc 761  T
Q  308 caaataaatcctaaatgttaagtttaaccccaaat 342  Q
    || ||||||||| | |||||| |||||||||||||    
T  760 catataaatcctgactgttaactttaaccccaaat 726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 436 - 546
Target Start/End: Complemental strand, 653 - 543
Alignment:
Q  436 accattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttcttttcttcatcttcttcc-tccctcacttcataattc 534  Q
    |||||| ||||||||| ||||| ||||||||||||| || ||||||||| |||||| |||| ||||||||||||||||||| ||||   |||||||||||    
T  653 accattggattatgca-gtctactttatcttactgtgaatcaacaacacctaattttatttccttttcttcatcttcttccttccccttcttcataattc 555  T
Q  535 aacatcaccttc 546  Q
    |||| |||||||    
T  554 aacaacaccttc 543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 202 - 412
Target Start/End: Original strand, 127428 - 127637
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctcc 301  Q
    ||||||||| ||| |||||||||||| || ||||||||  |||||| ||||||||||| || |||||||| |   ||||  ||||||||  ||| |||||    
T  127428 ttaggcttaataggtcatttggtcccctaattaatttcaagttttcgttttggtcccataactaataaaactcatgttttggtccctcatgtttgcctcc 127527  T
Q  302 gtttgccaaataaatcc-taaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattatttta 400  Q
    ||  | ||||||||||| | |  ||||| ||||||| ||||||   ||| |||| | ||||||||| ||||||||||||||||||||||||||  |||||    
T  127528 gtcggtcaaataaatccctgacagttaactttaacctcaaatgt--ctatggtgaaacaaccttaagagtggtccaccatagatcctattaatgttttta 127625  T
Q  401 atttcaaccgtt 412  Q
    |||| |||||||    
T  127626 atttaaaccgtt 127637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 128712 - 128657
Alignment:
Q  202 ttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcc 257  Q
    ||||||||| ||| ||||||||||||||| |||||||   ||||||||||||||||    
T  128712 ttaggcttaataggtcatttggtcccttaattaattttaagttttcattttggtcc 128657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 51; Significance: 9e-20; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 204 - 374
Target Start/End: Complemental strand, 2594 - 2426
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||||||||| ||||||||| | ||||||||   ||||||||||||||||||||||||||||||   | |||  |||||| |  |||||||| ||    
T  2594 aggcttattagatcaattggtccctcaattaatttcca-ttttcattttggtcccacaattaataaaaagtaccttttggtcccttagtttttcctctgt 2496  T
Q  304 ttgccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtc 374  Q
    || |||||||||| |  | |||||| |||||| |||||| |||  | |||||| |||||||||||||||||    
T  2495 tttccaaataaattccgactgttaactttaactccaaat-atgtaatggtggaccaaccttaaaagtggtc 2426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 204 - 416
Target Start/End: Original strand, 21124 - 21335
Alignment:
Q  204 aggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgt 303  Q
    ||||||||||||||  |||| |||| | |||||||    |||||||||| |||||| ||||||||||||   | |||   ||||| |  |||||||||||    
T  21124 aggcttattagatccattggcccctcaattaattttcatttttcattttagtcccataattaataaaaagtaccttttgatcccttagtttttcctccgt 21223  T
Q  304 ttgccaaataaatcctaaat-gttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaat 402  Q
    |||||||||||||| |   | ||||||||||||| ||||||   ||| |||||| ||||||| | ||||||||||||||||    ||||||| ||| |||    
T  21224 ttgccaaataaatcattcgttgttaagtttaaccacaaatgt--ctatggtggaccaaccttcagagtggtccaccatagacttcattaattttttaaat 21321  T
Q  403 ttcaaccgtttgat 416  Q
    || |||||||||||    
T  21322 tttaaccgtttgat 21335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 416
Target Start/End: Complemental strand, 799 - 589
Alignment:
Q  205 ggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtt 304  Q
    |||||| ||| |||||||||||  || ||||||||  |||||||||||||||||| || |||||||| |   ||||  ||||||||  |||  ||| ||     
T  799 ggcttaataggtcatttggtcctctaattaatttccagttttcattttggtcccataactaataaaactcatgttttggtccctcaagtttgtctctgtc 700  T
Q  305 tgccaaataaatcc-taaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatt 403  Q
     | ||||||||||| | | ||| |||||||||| ||||||    |||  |||| ||||||||| |||||||||||||||| | |||||| | ||||||||    
T  699 ggtcaaataaatccctgattgtcaagtttaacctcaaatgtatataa--tggaccaaccttaagagtggtccaccatagaccttattaaattttttaatt 602  T
Q  404 tcaaccgtttgat 416  Q
    | |||||||||||    
T  601 taaaccgtttgat 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 324 - 416
Target Start/End: Complemental strand, 8188 - 8099
Alignment:
Q  324 gttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||| ||||||||||||||   ||| |||||||||||||||| || |||||| |||||||  |||||||||||||||||| |||||||||||    
T  8188 gttaattttaaccccaaatgt--ctatggtggatcaaccttaagag-ggtccatcatagattatattaattattttaatttaaaccgtttgat 8099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 18847 - 18923
Alignment:
Q  242 gttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaatcc 318  Q
    |||||||||||||||||| | ||||||||| |   |||| |||||||||| |||| |||||||||||||||||||||    
T  18847 gttttcattttggtcccatatttaataaaacttatgttttagtccctcactttttactccgtttgccaaataaatcc 18923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 306 - 522
Target Start/End: Original strand, 32670 - 32886
Alignment:
Q  306 gccaaataaatcctaaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctatta--attattttaatt 403  Q
    |||||||||||||||| |||||| |||||||  |||||   ||| |||||| ||||||||  ||||||||| ||||||||||||||   || ||||||||    
T  32670 gccaaataaatcctaactgttaactttaaccttaaatgt--ctatggtggaccaaccttaggagtggtccatcatagatcctattattttttttttaatt 32767  T
Q  404 tcaaccgtttgat-annnnnnnnnnaaaagataaccattagattatgcaagtctattttatcttactgtaaaccaacaacacgtaatttaattttctttt 502  Q
    | |||||||||||            ||||||  |||||||||| ||||| ||||| | |||||||| ||||||||||||||  ||| || | | ||| ||    
T  32768 taaaccgtttgatcttttttttattaaaagaggaccattagatcatgcatgtctactgtatcttacggtaaaccaacaacatctaacttta-tatctatt 32866  T
Q  503 cttcatcttcttcctccctc 522  Q
    ||||||||||||||| ||||    
T  32867 cttcatcttcttccttcctc 32886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 201 - 271
Target Start/End: Complemental strand, 1207 - 1137
Alignment:
Q  201 tttaggcttattagatcatttggtcccttatttaatttcgtgttttcattttggtcccacaattaataaaa 271  Q
    |||||||||| ||| ||||||||||||| |  |||||||  |||||||||||||||||| || ||||||||    
T  1207 tttaggcttaataggtcatttggtccctcaaataatttccagttttcattttggtcccataagtaataaaa 1137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 319 - 416
Target Start/End: Original strand, 22093 - 22188
Alignment:
Q  319 taaatgttaagtttaaccccaaatgatgctaaggtggatcaaccttaaaagtggtccaccatagatcctattaattattttaatttcaaccgtttgat 416  Q
    ||||| ||||||||||||| |||||   ||| |||||| |||| ||  | ||||||||||||||| ||||||||||  |||||||| |||| ||||||    
T  22093 taaatcttaagtttaacccaaaatgc--ctatggtggaccaacattgtaggtggtccaccatagaccctattaatttctttaatttaaaccatttgat 22188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 9871 - 9908
Alignment:
Q  219 tttggtcccttatttaatttcgtgttttcattttggtc 256  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  9871 tttgatcccctatttaatttcgtgttttcattttggtc 9908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 227 - 316
Target Start/End: Complemental strand, 83299 - 83210
Alignment:
Q  227 cttatttaatttcgtgttttcattttggtcccacaattaataaaaatggcgtttaagtccctcaccttttcctccgtttgccaaataaat 316  Q
    |||||||||||   || ||| ||||||||| |||||||||||||| |  ||||| ||||| |||| ||| || | |||||||||||||||    
T  83299 cttatttaattctttggttttattttggtctcacaattaataaaactcacgttttagtccttcacttttcccacagtttgccaaataaat 83210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University