View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17322_high_5 (Length: 215)
Name: NF17322_high_5
Description: NF17322
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17322_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 194
Target Start/End: Original strand, 37937398 - 37937581
Alignment:
| Q |
19 |
gagtatgtgtcagtaattttaatttggatacactaaaa-aactataatgacaagacatcacacacgttgagagaccaaaatagttgttcagaaaccaatt |
117 |
Q |
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| T |
37937398 |
gagtatatgttagtaattttaatttggatacactaaaaaaactataatgacaacacatcacacacgttgagagaccaaaatagttgttcagaaaccaatt |
37937497 |
T |
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| Q |
118 |
aacgac-gnnnnnnngagta------aaatagaaatgaagacctgtaaaaaggtggatgagatggcaacgaggaacgtagcggc |
194 |
Q |
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| T |
37937498 |
aacgacggaaaaaaagagtaaaacagaaatagaaatgaagacctgtaaaaaggtagatgagatggcaacgaggaacgtagcggc |
37937581 |
T |
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