View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17325_high_10 (Length: 294)

Name: NF17325_high_10
Description: NF17325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17325_high_10
NF17325_high_10
[»] chr3 (23 HSPs)
chr3 (8-278)||(21386966-21387236)
chr3 (6-95)||(4155378-4155467)
chr3 (19-95)||(16926903-16926979)
chr3 (9-95)||(54567946-54568032)
chr3 (6-95)||(20327790-20327879)
chr3 (10-71)||(34992684-34992745)
chr3 (6-95)||(35038369-35038458)
chr3 (5-95)||(45828073-45828163)
chr3 (13-114)||(8142595-8142696)
chr3 (6-95)||(20303326-20303415)
chr3 (6-95)||(49629659-49629748)
chr3 (6-95)||(1723017-1723106)
chr3 (5-93)||(16239647-16239736)
chr3 (6-67)||(46139344-46139405)
chr3 (6-69)||(21809081-21809145)
chr3 (12-95)||(11589839-11589922)
chr3 (50-93)||(39269387-39269430)
chr3 (40-106)||(40765910-40765977)
chr3 (28-95)||(54368570-54368637)
chr3 (6-95)||(13574861-13574951)
chr3 (49-95)||(27783112-27783158)
chr3 (6-42)||(20303240-20303276)
chr3 (34-90)||(34659206-34659261)
[»] chr4 (30 HSPs)
chr4 (6-95)||(35819069-35819158)
chr4 (6-96)||(30530103-30530193)
chr4 (6-95)||(22231249-22231338)
chr4 (6-93)||(4645698-4645785)
chr4 (6-95)||(34357971-34358060)
chr4 (6-95)||(40717382-40717471)
chr4 (7-94)||(6218259-6218346)
chr4 (6-76)||(28245702-28245772)
chr4 (7-95)||(11036688-11036776)
chr4 (20-76)||(21646456-21646512)
chr4 (6-68)||(9908772-9908834)
chr4 (30-95)||(17111617-17111682)
chr4 (7-95)||(35788713-35788802)
chr4 (8-92)||(7926385-7926469)
chr4 (11-95)||(21750223-21750307)
chr4 (7-102)||(24513301-24513397)
chr4 (6-95)||(12869204-12869293)
chr4 (5-114)||(32002358-32002466)
chr4 (6-95)||(35796918-35797007)
chr4 (6-90)||(4905677-4905761)
chr4 (7-67)||(6666761-6666821)
chr4 (5-106)||(4464338-4464440)
chr4 (6-112)||(9685435-9685541)
chr4 (10-64)||(13555422-13555476)
chr4 (57-95)||(41853428-41853466)
chr4 (24-105)||(51695974-51696056)
chr4 (37-94)||(50543539-50543596)
chr4 (14-69)||(26549503-26549559)
chr4 (6-74)||(36686082-36686150)
chr4 (6-106)||(53828464-53828564)
[»] chr5 (21 HSPs)
chr5 (6-95)||(17150409-17150498)
chr5 (4-106)||(24531642-24531744)
chr5 (6-112)||(25258242-25258348)
chr5 (6-112)||(25322032-25322138)
chr5 (10-95)||(6919374-6919459)
chr5 (6-90)||(95442-95526)
chr5 (8-95)||(15480376-15480463)
chr5 (14-112)||(2063683-2063781)
chr5 (6-95)||(24346677-24346767)
chr5 (6-95)||(43117701-43117790)
chr5 (6-76)||(24270046-24270117)
chr5 (6-95)||(41666933-41667023)
chr5 (6-95)||(18333640-18333729)
chr5 (8-95)||(9368649-9368736)
chr5 (7-45)||(13700767-13700805)
chr5 (8-74)||(20510819-20510885)
chr5 (21-67)||(30770226-30770272)
chr5 (6-95)||(8098371-8098460)
chr5 (34-95)||(24528594-24528655)
chr5 (6-95)||(32908893-32908982)
chr5 (19-67)||(411660-411708)
[»] scaffold0519 (1 HSPs)
scaffold0519 (5-95)||(1970-2060)
[»] chr8 (28 HSPs)
chr8 (5-95)||(11232369-11232459)
chr8 (5-95)||(41790712-41790802)
chr8 (6-95)||(20301315-20301404)
chr8 (6-95)||(21087947-21088036)
chr8 (30-94)||(27439512-27439576)
chr8 (6-103)||(31197661-31197757)
chr8 (6-68)||(18004270-18004332)
chr8 (6-95)||(24532362-24532451)
chr8 (7-95)||(39052871-39052959)
chr8 (8-94)||(8084182-8084268)
chr8 (6-95)||(3157500-3157589)
chr8 (34-95)||(5932153-5932214)
chr8 (8-93)||(37868526-37868611)
chr8 (6-73)||(7669495-7669562)
chr8 (6-73)||(10615470-10615537)
chr8 (6-93)||(12317102-12317189)
chr8 (33-95)||(11232162-11232224)
chr8 (6-92)||(31079516-31079602)
chr8 (6-95)||(19256761-19256850)
chr8 (6-95)||(34842732-34842821)
chr8 (34-106)||(10614908-10614980)
chr8 (7-95)||(15042826-15042916)
chr8 (6-95)||(4828122-4828211)
chr8 (6-95)||(16050083-16050172)
chr8 (7-76)||(20094737-20094806)
chr8 (14-90)||(12688131-12688207)
chr8 (6-70)||(35682957-35683021)
chr8 (35-95)||(36917409-36917469)
[»] chr1 (27 HSPs)
chr1 (6-104)||(38668170-38668268)
chr1 (7-93)||(38733207-38733293)
chr1 (6-95)||(26176962-26177051)
chr1 (6-95)||(30369889-30369978)
chr1 (6-95)||(31496312-31496401)
chr1 (6-106)||(16162976-16163076)
chr1 (6-106)||(27413390-27413490)
chr1 (4-73)||(4112714-4112783)
chr1 (6-95)||(33156787-33156877)
chr1 (6-95)||(35772083-35772172)
chr1 (6-95)||(4098344-4098433)
chr1 (6-95)||(51460383-51460472)
chr1 (41-93)||(5109306-5109358)
chr1 (6-70)||(52961426-52961490)
chr1 (8-95)||(4112949-4113036)
chr1 (20-95)||(8870865-8870940)
chr1 (6-95)||(39348293-39348382)
chr1 (34-95)||(17402636-17402697)
chr1 (7-76)||(32783223-32783292)
chr1 (6-65)||(369714-369774)
chr1 (27-95)||(17452790-17452858)
chr1 (19-95)||(51460004-51460080)
chr1 (6-76)||(35892129-35892199)
chr1 (6-95)||(25145661-25145750)
chr1 (6-59)||(25713248-25713301)
chr1 (7-60)||(47370641-47370694)
chr1 (6-106)||(51589849-51589949)
[»] chr6 (24 HSPs)
chr6 (6-95)||(13353255-13353344)
chr6 (6-95)||(33796380-33796469)
chr6 (6-95)||(12330120-12330209)
chr6 (6-112)||(3680049-3680155)
chr6 (4-95)||(11085635-11085726)
chr6 (6-95)||(6237648-6237737)
chr6 (6-95)||(6542884-6542973)
chr6 (7-64)||(17147837-17147894)
chr6 (6-95)||(33494593-33494682)
chr6 (12-107)||(8001496-8001592)
chr6 (6-70)||(30505581-30505645)
chr6 (6-74)||(33631746-33631814)
chr6 (7-77)||(27993583-27993654)
chr6 (6-95)||(4868753-4868843)
chr6 (6-104)||(32290773-32290871)
chr6 (7-95)||(7638790-7638878)
chr6 (6-106)||(21690765-21690865)
chr6 (8-103)||(3921604-3921699)
chr6 (9-80)||(30849346-30849417)
chr6 (6-76)||(6400796-6400865)
chr6 (6-60)||(31961032-31961086)
chr6 (50-103)||(10145735-10145788)
chr6 (12-92)||(19712773-19712853)
chr6 (52-104)||(20373615-20373667)
[»] chr2 (27 HSPs)
chr2 (6-95)||(93295-93384)
chr2 (5-95)||(16419321-16419411)
chr2 (6-95)||(14466351-14466440)
chr2 (6-125)||(15124724-15124843)
chr2 (6-93)||(40149177-40149264)
chr2 (6-95)||(2029823-2029912)
chr2 (6-95)||(36352100-36352189)
chr2 (6-92)||(2375104-2375190)
chr2 (6-95)||(93568-93657)
chr2 (6-95)||(40379385-40379474)
chr2 (6-80)||(42895316-42895391)
chr2 (11-93)||(5594083-5594166)
chr2 (7-95)||(17719454-17719542)
chr2 (6-93)||(38629897-38629985)
chr2 (7-90)||(33606231-33606314)
chr2 (6-68)||(34893506-34893568)
chr2 (6-95)||(2324294-2324383)
chr2 (52-95)||(10571024-10571067)
chr2 (6-68)||(13210607-13210670)
chr2 (27-70)||(26237151-26237194)
chr2 (32-95)||(29718382-29718445)
chr2 (26-76)||(43319751-43319802)
chr2 (34-112)||(24395900-24395978)
chr2 (6-64)||(37812444-37812502)
chr2 (6-95)||(5509133-5509222)
chr2 (6-95)||(16533366-16533455)
chr2 (8-92)||(13250200-13250284)
[»] chr7 (28 HSPs)
chr7 (6-93)||(21861350-21861437)
chr7 (8-95)||(25620190-25620277)
chr7 (6-95)||(29469659-29469748)
chr7 (6-112)||(36277167-36277273)
chr7 (6-95)||(1596647-1596736)
chr7 (7-95)||(4506986-4507074)
chr7 (20-95)||(4886383-4886458)
chr7 (6-95)||(33834245-33834334)
chr7 (8-92)||(2404351-2404435)
chr7 (6-89)||(22574661-22574744)
chr7 (13-68)||(44874526-44874581)
chr7 (8-74)||(36993251-36993317)
chr7 (6-95)||(10882180-10882269)
chr7 (6-94)||(33996255-33996340)
chr7 (6-95)||(3519980-3520069)
chr7 (6-76)||(20305363-20305437)
chr7 (6-94)||(10903140-10903228)
chr7 (7-95)||(26562015-26562103)
chr7 (6-76)||(5871896-5871967)
chr7 (41-76)||(35308452-35308487)
chr7 (10-64)||(9689045-9689099)
chr7 (8-106)||(21821849-21821947)
chr7 (7-48)||(1936289-1936330)
chr7 (7-95)||(26239857-26239946)
chr7 (7-76)||(28080737-28080806)
chr7 (5-112)||(2544389-2544494)
chr7 (7-78)||(17948305-17948377)
chr7 (5-105)||(18826428-18826528)
[»] scaffold0045 (1 HSPs)
scaffold0045 (4-106)||(41145-41247)
[»] scaffold0692 (1 HSPs)
scaffold0692 (6-95)||(5695-5784)
[»] scaffold0129 (1 HSPs)
scaffold0129 (6-95)||(14357-14446)
[»] scaffold0048 (1 HSPs)
scaffold0048 (13-114)||(81877-81978)
[»] scaffold0092 (1 HSPs)
scaffold0092 (3-95)||(5709-5801)
[»] scaffold0047 (1 HSPs)
scaffold0047 (6-112)||(12684-12790)
[»] scaffold0400 (1 HSPs)
scaffold0400 (6-95)||(3899-3988)
[»] scaffold0365 (1 HSPs)
scaffold0365 (6-95)||(4543-4632)
[»] scaffold0083 (1 HSPs)
scaffold0083 (14-67)||(51355-51408)
[»] scaffold0542 (1 HSPs)
scaffold0542 (5-45)||(5733-5773)
[»] scaffold0003 (1 HSPs)
scaffold0003 (6-73)||(87750-87818)


Alignment Details
Target: chr3 (Bit Score: 175; Significance: 3e-94; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 8 - 278
Target Start/End: Complemental strand, 21387236 - 21386966
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcga 107  Q
    |||||| ||| ||||||| ||||| || | ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||   | ||||||| ||     
T  21387236 atagcgaaaacctgataataggtggcctactggatcttagagagactctgataccatcttaaaaatcgtaattaagcctaatacggtcctacaaaaccgg 21387137  T
Q  108 attgtaaaatgcagattgttttcatttataaatacatgttcagaccatcttttattcgatatcaactatttaacaagaacgacatagttaaatatcattt 207  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  21387136 attgtaaagtgcagattgttctcatttataaacacatgttcagaccatcttttattcgatgtgaactatttaacaagaacggcatagttaaatatcattt 21387037  T
Q  208 gcataagtaaataggtgcagagaataacgcagaatcgtgaaattctaccatctatgactagataaactttt 278  Q
    |||| |||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  21387036 gcatgagtaaataggtgtagagaataacgcggtatcgtgaaattctaccatctatgactagataaactttt 21386966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 4155467 - 4155378
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||| ||||||| ||||| |||||||||||||||||||||| |||||||  ||| |||||||||||||    
T  4155467 cgatagcggaaacctgatagcaggtggcccaatgaatcttggagagactctgataccatcttagaaatcgtggttgggcctaacacaacc 4155378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 16926903 - 16926979
Alignment:
Q  19 ctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||  |||||| ||||||||||    
T  16926903 ctgataacaggtgacccaatggatcttgaagagactctgataccatcttagaaatcgtggttgagcttaacacaacc 16926979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 54568032 - 54567946
Alignment:
Q  9 tagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||| |||||| |||||| | ||||||||||| ||||| |||||||||||||||| |||||||  ||| |||||||||||||    
T  54568032 tagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 54567946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 20327790 - 20327879
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||| |||||||||| |||||||| | |||||||||| ||| ||||| |  ||| |||||||||||||    
T  20327790 cgatagcggaaacctgatagcaggtggcccaatggattttagagaggcactgataccatattagaaatcatggttgggcctaacacaacc 20327879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 34992745 - 34992684
Alignment:
Q  10 agcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaa 71  Q
    |||||||| |||||| |||||| ||||||||| ||| |||||||||||||||||||||||||    
T  34992745 agcggaaacctgatagcaggtggcccaatggaccttggagagactctgataccatcttaaaa 34992684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 35038369 - 35038458
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||  |||||| ||||||||||||| ||||| | |||||||||||||| || ||||  ||| |||||||||||||    
T  35038369 cgatagcggaaacctgattgcaggtggcccaatggatcttggagaggcactgataccatcttagaagtcgtggttgggcctaacacaacc 35038458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 45828163 - 45828073
Alignment:
Q  5 tcgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||||| ||| || |||||| | ||||||||||| ||||| |||||||||||||||| |||| ||  | | |||||||||||||    
T  45828163 tcgatagcggaaacctggtagcaggtggcgcaatggatcttggagaggctctgataccatcttagaaattgtggtagggcctaacacaacc 45828073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 8142595 - 8142696
Alignment:
Q  13 ggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcgaattgt 112  Q
    |||||||||||| ||| ||||| ||||||| ||| |||| |||||||||||||||| |||||||  ||   ||||||||||||  |||||| ||| ||||    
T  8142595 ggaaatctgatagcagatgacctaatggattttaaagaggctctgataccatcttagaaatcgtggttagacctaacacaaccccacaaaaccgatttgt 8142694  T
Q  113 aa 114  Q
    ||    
T  8142695 aa 8142696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 20303326 - 20303415
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||| ||||| |||||| |||||| |||||||||| |||||||| |||||||||||| ||| |||| ||  |||  ||||||||||||    
T  20303326 cgatagtggaaacctgatagcaggtggcccaatggattttagagaggctctgataccatattagaaattgtggttggacctaacacaacc 20303415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 49629748 - 49629659
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||| |||| |||||| ||||||  ||||||||||||  |||| |||| ||||||| |||||||| ||||||| | |||||||||||    
T  49629748 cgatagcagaaacctgatagcaggtggtccaatggatcttgaagaggctctaataccattttaaaaatggtaattgggtctaacacaacc 49629659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 1723017 - 1723106
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| ||||||||||||| |||||   ||| |  |||| |||||||||||||||| |||||||  ||| |||||||||||||    
T  1723017 cgataacggaaacctgataacaggtggcccaaacaatcgtgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 1723106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 16239736 - 16239647
Alignment:
Q  5 tcgatagcggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaa 93  Q
    |||||| |||||| |||||| |||||| || || ||||||| ||| || |||||||||||||||| |||||||  ||| |||||||||||    
T  16239736 tcgataacggaaacctgatagcaggtggccaaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaa 16239647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 46139405 - 46139344
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatctt 67  Q
    ||||||| |||| |||||| |||||||||||||||||||| |||||  ||| ||||||||||    
T  46139405 cgatagcagaaacctgatagcaggtgacccaatggatcttggagaggatctaataccatctt 46139344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 21809081 - 21809145
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatctt-agagagactctgataccatcttaa 69  Q
    |||||||||||| |||||| |||||||||||||||||||| |   || |||||||||||||||||    
T  21809081 cgatagcggaaacctgatagcaggtgacccaatggatcttgaaccaggctctgataccatcttaa 21809145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 95
Target Start/End: Complemental strand, 11589922 - 11589839
Alignment:
Q  12 cggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||| ||||||||||||| ||||| | ||| |  |||| |||||||||||| ||| |||||||  ||| |||||||||||||    
T  11589922 cggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaacc 11589839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 39269430 - 39269387
Alignment:
Q  50 agactctgataccatcttaaaaatcgtaattgagcctaacacaa 93  Q
    |||||||||||||||||||||||||||| ||  |||||||||||    
T  39269430 agactctgataccatcttaaaaatcgtagttaggcctaacacaa 39269387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 40765910 - 40765977
Alignment:
Q  40 gatcttaga-gagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcg 106  Q
    ||||||||| |||||||||||||||||||||||||  |  |||||||||||||||   ||||||||||    
T  40765910 gatcttagatgagactctgataccatcttaaaaattatgtttgagcctaacacaattctacaaaatcg 40765977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 54368637 - 54368570
Alignment:
Q  28 ggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||| |||||||||||||  |||| |||||||||||||||| |||||||  ||| | |||||||||||    
T  54368637 ggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggtctaacacaacc 54368570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 13574861 - 13574951
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatctt-agagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||| ||||||||||||| |  ||| || ||||||||| ||| |||| ||  ||| |||||||||||||    
T  13574861 cgatagcggaaacctgatagcaggtggcccaatggatcttaactgaggctttgataccatattagaaattgtggttgggcctaacacaacc 13574951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 27783158 - 27783112
Alignment:
Q  49 gagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||||||||||| ||||| | |||| |||||||||||||    
T  27783158 gagactctgataccatcttagaaatcatgattgggcctaacacaacc 27783112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 20303240 - 20303276
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggat 42  Q
    |||||||||||| |||||| |||||||||||||||||    
T  20303240 cgatagcggaaacctgatagcaggtgacccaatggat 20303276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 34659206 - 34659261
Alignment:
Q  34 ccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaaca 90  Q
    |||| |||||||  |||| ||||||||||||||| ||||||||| ||||||||||||    
T  34659206 ccaacggatcttgaagaggctctgataccatctt-aaaatcgtagttgagcctaaca 34659261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 8e-27; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 35819069 - 35819158
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||  ||| |||||||||||||    
T  35819069 cgatagcggaaacctgatagcaggtggcccaatggatcttagagagactctgatgccatcttaaaaatcgtggttgggcctaacacaacc 35819158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 30530103 - 30530193
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacca 96  Q
    ||||||||||||||||||| |||||| || |||||||||| ||||| |||||||||||||||| |||| ||  |||||||||||| |||||    
T  30530103 cgatagcggaaatctgatagcaggtggcctaatggatcttggagaggctctgataccatcttagaaattgtggttgagcctaacataacca 30530193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 22231249 - 22231338
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||| |||||||||| || ||||| |||||||||||||||| |||||||  ||| |||||||||||||    
T  22231249 cgatagcggaaacctgatagcaggtggcccaatggattttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 22231338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 4645785 - 4645698
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaa 93  Q
    |||||||||||| |||||| |||||||||||||||||||| ||||| ||||||||| |||||| ||||| |  ||||| |||||||||    
T  4645785 cgatagcggaaacctgatagcaggtgacccaatggatctttgagaggctctgatactatcttataaatcatggttgagtctaacacaa 4645698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 34357971 - 34358060
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| ||||||||| ||| |||||| ||||||  |||| |||||||| ||||||| |||||||  |||||||||||||||||    
T  34357971 cgatagcggaaacctgataacaagtggcccaatagatcttgtagaggctctgatatcatcttagaaatcgtgtttgagcctaacacaacc 34358060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 40717382 - 40717471
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||  |||||| |||||||||| || ||||| |||||||||||||||| |||||||  ||| |||||||||||||    
T  40717382 cgatagcggaaacctgatggcaggtggcccaatggatattggagaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 40717471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 6218346 - 6218259
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaac 94  Q
    ||||||||||| ||||||  |||||| |||||||||||| ||||| |||||||||||||||| |||||||  ||| | ||||||||||    
T  6218346 gatagcggaaacctgatagtaggtgatccaatggatcttggagaggctctgataccatcttagaaatcgtggttgtgtctaacacaac 6218259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 28245702 - 28245772
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgt 76  Q
    |||||||||||| |||||| |||||| ||||||||||||| ||||| |||||||||||| ||| |||||||    
T  28245702 cgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaatcgt 28245772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 11036688 - 11036776
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||| || |||  ||||| ||||||||||||||||| | ||||||||||||||||||||| ||  ||  |||||||||||||    
T  11036688 gatagcggaaacctaatagtaggtggcccaatggatcttagagtggctctgataccatcttaaaaattgtggttaggcctaacacaacc 11036776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 21646456 - 21646512
Alignment:
Q  20 tgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgt 76  Q
    ||||| |||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  21646456 tgatagcaggtgacccaatgaatcttggagagactctaataccatcttaaaaatcgt 21646512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 9908772 - 9908834
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatctta 68  Q
    ||||| ||||||||||||| ||||||  ||||| |||||| ||||||||||||||||||||||    
T  9908772 cgataacggaaatctgatagcaggtggtccaatagatcttggagagactctgataccatctta 9908834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 17111682 - 17111617
Alignment:
Q  30 tgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||||||| || ||||||||||||||||||| |||||||  ||| |||||||||||||    
T  17111682 tgacctaatggatcttggaaagactctgataccatcttagaaatcgtggttgggcctaacacaacc 17111617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 35788802 - 35788713
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||| |||||| |||||| |||||| ||||| ||||||| ||| || |||||||||||||||| |||||||  ||| |||||||||||||    
T  35788802 gataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 35788713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 7926469 - 7926385
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacaca 92  Q
    |||| ||||| |||||| |||||| ||||||||||||| ||||| |||||||||||||||  ||||| |  ||| ||||||||||    
T  7926469 atagtggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttcgaaatcttggttgggcctaacaca 7926385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 21750223 - 21750307
Alignment:
Q  11 gcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||| |||| || |||| |||||| || ||| |||| ||||||||||||||||||| |||| |||| | |||||||||||    
T  21750223 gcggaaatcagatagcatgtgatccaatgaattttaaagaggctctgataccatcttaaaattcgtgattgggtctaacacaacc 21750307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 24513301 - 24513397
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaa 102  Q
    |||||||||| ||||||| ||| ||  ||||| |||||||||| || |||||||| ||| ||| ||||||| |||| ||||||||||||| ||||||    
T  24513301 gatagcggaagtctgatagcagatggtccaatagatcttagaggaggctctgatatcatgttagaaatcgtgattgggcctaacacaaccctacaaa 24513397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 12869204 - 12869293
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| |||||||||||||  ||||   ||| |  ||||||||||||||||||||| |||||||  ||| |||||||||||||    
T  12869204 cgataacggaaacctgataacaggtgggccaaaaaatcgtgaagagactctgataccatcttagaaatcgtggttgggcctaacacaacc 12869293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 32002466 - 32002358
Alignment:
Q  5 tcgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaat 104  Q
    ||||||||||||| |||||| ||| ||||| ||| |||||| |||||  |||||||||||||||||||| ||  ||| | |||| ||||||  ||||||     
T  32002466 tcgatagcggaaacctgatagcagatgacc-aatagatcttggagaggttctgataccatcttaaaaattgtgtttgggtctaatacaacctcacaaaac 32002368  T
Q  105 cgaattgtaa 114  Q
    ||| ||||||    
T  32002367 cgatttgtaa 32002358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 35796918 - 35797007
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||   |||||||||||   |||| |||||||||||||||| |||| ||| ||| || ||||||||||    
T  35796918 cgatagcggaaacctgatagcaggtagtccaatggatctcgaagaggctctgataccatcttagaaatggtagttgggcttaacacaacc 35797007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 4905677 - 4905761
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaaca 90  Q
    ||||||| |||| || ||| |||||| ||||||||| ||| ||||| |||||||| ||||||| ||||| |  ||||||||||||    
T  4905677 cgatagcagaaacctaatagcaggtggcccaatggagcttggagaggctctgatatcatcttagaaatcatggttgagcctaaca 4905761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 6666761 - 6666821
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatctt 67  Q
    ||||||||||  ||||||| ||||| |||||||||| || |||| ||||||||||||||||    
T  6666761 gatagcggaatcctgataaaaggtgtcccaatggattttggagatactctgataccatctt 6666821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 4464440 - 4464338
Alignment:
Q  5 tcgatagcggaaatctgataacaggtgacccaatggatctt-agagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaa 103  Q
    |||||| |||||| |||||| || ||||||||||||||||| |  ||| |||||||||||||||| || ||||  ||| | |||||| ||||  ||||||    
T  4464440 tcgataacggaaacctgatagcatgtgacccaatggatcttgaaggaggctctgataccatcttagaattcgtggttgggtctaacaaaaccccacaaaa 4464341  T
Q  104 tcg 106  Q
    |||    
T  4464340 tcg 4464338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 112
Target Start/End: Complemental strand, 9685541 - 9685435
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 105  Q
    ||||| |||||| ||||||||||||| ||||| | ||  |  |||| |||||||||||| ||| |||||||  ||| |||||||||||||  |||||| |    
T  9685541 cgataacggaaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaacctcacaaaacc 9685442  T
Q  106 gaattgt 112  Q
    || ||||    
T  9685441 gacttgt 9685435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 13555422 - 13555476
Alignment:
Q  10 agcggaaatctgataacaggtgacccaatggatcttagagagactctgataccat 64  Q
    |||||||| |||||| ||||||  |||||||||||| ||||| ||||||||||||    
T  13555422 agcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccat 13555476  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 95
Target Start/End: Complemental strand, 41853466 - 41853428
Alignment:
Q  57 gataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||| ||||||||||| ||||||||||||||||||    
T  41853466 gataccattttaaaaatcgtgattgagcctaacacaacc 41853428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 51695974 - 51696056
Alignment:
Q  24 aacaggtgacccaatggatcttag-agagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 105  Q
    |||||||||||||||| ||||||  ||||  ||| ||||||||||  ||||||||  |||| ||||||||||| |||||||||    
T  51695974 aacaggtgacccaatgaatcttaacagaggttctaataccatcttcgaaatcgtaggtgagtctaacacaaccctacaaaatc 51696056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 50543539 - 50543596
Alignment:
Q  37 atggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaac 94  Q
    ||||||||| ||||| |||||||| ||||||| |||||||  ||| ||||||||||||    
T  50543539 atggatcttggagaggctctgatatcatcttagaaatcgtggttgggcctaacacaac 50543596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 26549559 - 26549503
Alignment:
Q  14 gaaatctgataacaggtgacccaatggatcttaga-gagactctgataccatcttaa 69  Q
    |||| |||||| ||||||||||||  ||||||||| |||||||||||| ||||||||    
T  26549559 gaaacctgatagcaggtgacccaacagatcttagaggagactctgatatcatcttaa 26549503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 36686082 - 36686150
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatc 74  Q
    |||||||||||| |||||| |||||| |||| || |||||  |||| |||| |||| ||||||||||||    
T  36686082 cgatagcggaaacctgatagcaggtggcccattgaatcttgaagaggctcttatactatcttaaaaatc 36686150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 53828464 - 53828564
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 105  Q
    ||||| |||||| ||||||| ||||| ||||| | ||| |  | || |||||||||||||||| |||| ||  ||| |||||||||||||  ||||||||    
T  53828464 cgataacggaaacctgataataggtggcccaaagaatcgttaaaaggctctgataccatcttagaaattgtggttgggcctaacacaaccccacaaaatc 53828563  T
Q  106 g 106  Q
    |    
T  53828564 g 53828564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 17150409 - 17150498
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| ||||||  ||||| |||||||||||||  |||| ||||||||||||||||||||||||| |||||||||||||||||    
T  17150409 cgatagcggaaacctgatagtaggtggcccaatggatcttgaagaggctctgataccatcttaaaaatcgtagttgagcctaacacaacc 17150498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 24531744 - 24531642
Alignment:
Q  4 ttcgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaa 103  Q
    ||||||| | |||| |||||| |||||| ||||||||||| ||||||| |||||||||||||||| |||||||  ||| || ||||||||||  ||||||    
T  24531744 ttcgataacagaaaactgatagcaggtggcccaatggatcatagagaggctctgataccatcttagaaatcgtggttgggcataacacaaccccacaaaa 24531645  T
Q  104 tcg 106  Q
    |||    
T  24531644 tcg 24531642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 25258242 - 25258348
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 105  Q
    |||||||||||| |||||| |||||| ||||||||||||| ||||  |||||||||||||||| |||||||  |||||  ||||||||||  |||||| |    
T  25258242 cgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaatcgtggttgagtttaacacaaccccacaaaacc 25258341  T
Q  106 gaattgt 112  Q
    || ||||    
T  25258342 gacttgt 25258348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 25322032 - 25322138
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 105  Q
    |||||||||||| |||||| |||||| ||||||||||||| ||||  |||||||||||||||| |||||||  |||||  ||||||||||  |||||| |    
T  25322032 cgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgataccatcttagaaatcgtggttgagtttaacacaaccccacaaaacc 25322131  T
Q  106 gaattgt 112  Q
    || ||||    
T  25322132 gacttgt 25322138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 6919374 - 6919459
Alignment:
Q  10 agcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||| |||||| ||| |||| |||||||||||  |||| || |||||||||||||||||||||  |||||||||||||||||    
T  6919374 agcggaaacctgatagcagatgactcaatggatcttgaagaggctttgataccatcttaaaaatcgtggttgagcctaacacaacc 6919459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 95442 - 95526
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaaca 90  Q
    |||| ||||||| |||||| |||||| ||||||||||||| ||||| |||||||||||||||| |||||||  ||| ||||||||    
T  95442 cgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaaca 95526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 15480463 - 15480376
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||| |||||| |||||| |||||||||||||  |||| |||||||||||||||| |||||||  ||| |||||||| ||||    
T  15480463 atagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacagaacc 15480376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 2063683 - 2063781
Alignment:
Q  14 gaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcgaattgt 112  Q
    |||| ||||||||| |||| ||||||||||||  |||| |||||||||||||||| |||||||  ||| |||||||||||||  |||||| ||| ||||    
T  2063683 gaaacctgataacatgtgatccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgt 2063781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 24346677 - 24346767
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| |||||| |||||| ||||||||||||| ||| || ||||||||||||||||||||||||  ||| | |||||||||||    
T  24346677 cgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaaatcgtggttgggtctaacacaacc 24346767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 43117790 - 43117701
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||| |||||| |||||| || || ||||||||| |||||| |||||||  ||| |||||||||||||    
T  43117790 cgatagcggaaacctgatagcaggtggcccaatagatcttggaaaggctctgatactatcttagaaatcgttgttgggcctaacacaacc 43117701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 24270046 - 24270117
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttaga-gagactctgataccatcttaaaaatcgt 76  Q
    ||||| |||||| |||||| |||||| ||||||||||||| || ||| ||||||||||||||||||||||||    
T  24270046 cgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgataccatcttaaaaatcgt 24270117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 41666933 - 41667023
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| |||||| |||||| ||||| ||||||| ||| || |||||||||||||||| |||||||  ||| |||||||||||||    
T  41666933 cgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 41667023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 18333640 - 18333729
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||| ||| |||||| |||||| ||| |||||||||  |||| |||||||||||||||| || ||||  ||| |||||||||||||    
T  18333640 cgatagcgaaaacctgatagcaggtggcccgatggatcttgaagaggctctgataccatcttagaattcgtggttgggcctaacacaacc 18333729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 9368736 - 9368649
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||| |||||| |||||| |||||||||||||  |||| ||||||||||| |||| ||||  |  ||| |||||||||||||    
T  9368736 atagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccaccttagaaattatggttgggcctaacacaacc 9368649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 13700767 - 13700805
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatctt 45  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  13700767 gatagcggaaacctgatagcaggtgacccaatggatctt 13700805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 20510819 - 20510885
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatc 74  Q
    ||||| |||| |||||| |||||  |||| |||||||| ||||  ||||||||||||||||||||||    
T  20510819 atagcagaaacctgatagcaggtagcccagtggatcttggagacgctctgataccatcttaaaaatc 20510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 30770226 - 30770272
Alignment:
Q  21 gataacaggtgacccaatggatcttagagagactctgataccatctt 67  Q
    |||| |||||| ||||||||||||| ||||| |||||||||||||||    
T  30770226 gatagcaggtggcccaatggatcttggagaggctctgataccatctt 30770272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 8098460 - 8098371
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| ||||||||||||| ||||| | ||| |  |||| |||||||||||| ||| |||||||  ||| || ||||||||||    
T  8098460 cgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcttaacacaacc 8098371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 24528655 - 24528594
Alignment:
Q  34 ccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||| | ||||| |||||||||||||||| ||||| |  ||| |||||||||||||    
T  24528655 ccaatggatcatggagaggctctgataccatcttagaaatcatggttgggcctaacacaacc 24528594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 32908893 - 32908982
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||| |||| |||||| ||| || |||||||||||||  |||| |||| ||| ||||||| |||| ||  ||||| |||||||||||    
T  32908893 cgatagcagaaacctgatagcagatggcccaatggatcttgaagaggctctaatatcatcttagaaattgtggttgagtctaacacaacc 32908982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 411708 - 411660
Alignment:
Q  19 ctgataacaggtgacccaatggatcttagagagactctgataccatctt 67  Q
    |||||| || ||| |||||||||||||||| || |||||||||||||||    
T  411708 ctgatagcatgtggcccaatggatcttagataggctctgataccatctt 411660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 2060 - 1970
Alignment:
Q  5 tcgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| ||  ||| |||||||||||||    
T  2060 tcgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaacc 1970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 11232369 - 11232459
Alignment:
Q  5 tcgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| ||  ||| |||||||||||||    
T  11232369 tcgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaacc 11232459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 41790802 - 41790712
Alignment:
Q  5 tcgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||||| |||||| |||||| |||||||||||||  |||| |||||||||||||||| |||||||  ||| |||||||||||||    
T  41790802 tcgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 41790712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 20301404 - 20301315
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||| |||||||||||||  |||| |||||||||||||||| |||||||  ||| |||||||||||||    
T  20301404 cgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 20301315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 21088036 - 21087947
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||| |||||||||||||  |||| |||||||||||||||| |||||||  ||| |||||||||||||    
T  21088036 cgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 21087947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 27439512 - 27439576
Alignment:
Q  30 tgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaac 94  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||    
T  27439512 tgacccaacggatcttagagagactctgataccatcttaaaactcgtagttgagcctgacacaac 27439576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 31197757 - 31197661
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaa 103  Q
    |||||||||||| |||||| |||||| ||||||||||||  ||||| |||||||||||||||| ||||| |  ||| ||||||||||||| |||||||    
T  31197757 cgatagcggaaacctgatagcaggtggcccaatggatctcggagaggctctgataccatcttagaaatc-tggttgggcctaacacaaccctacaaaa 31197661  T

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Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 18004270 - 18004332
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatctta 68  Q
    |||||||||||| |||||| |||||| ||||||||||||| ||||| ||||||||||||||||    
T  18004270 cgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatctta 18004332  T

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Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 24532362 - 24532451
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||| |||||||||||||  || | |||||||||||||||| ||||| |  ||| |||||||||||||    
T  24532362 cgatagcggaaacctgatagcaggtggcccaatggatcttgaaggggctctgataccatcttagaaatcatggttgggcctaacacaacc 24532451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 39052871 - 39052959
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||| |||||| |||| | || |||||||||| ||||| |||| ||||||||||| |||||||  ||| |||||||||||||    
T  39052871 gatagcggaaacctgatagcagggggccaaatggatcttggagaggctctaataccatcttagaaatcgttgttgggcctaacacaacc 39052959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 8084268 - 8084182
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaac 94  Q
    |||||| ||| |||||| || ||| ||||||||||||| ||||| |||||||||||||||| |||||||  ||| | ||||||||||    
T  8084268 atagcgaaaacctgatagcatgtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggtctaacacaac 8084182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 3157500 - 3157589
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||| ||| |||||| ||||||  ||||||||| || ||||| |||||||| ||||||| |||| ||  |||||||||||||||||    
T  3157500 cgatagcgaaaacctgatagcaggtggtccaatggattttggagaggctctgatatcatcttataaatggtggttgagcctaacacaacc 3157589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 95
Target Start/End: Original strand, 5932153 - 5932214
Alignment:
Q  34 ccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| ||||| ||||||||||||||||||||| ||  ||| |||||||||||||    
T  5932153 ccaatggatcttggagaggctctgataccatcttaaaaatggtggttgggcctaacacaacc 5932214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 37868526 - 37868611
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaa 93  Q
    ||||||||||  ||||| | |||| ||||||||||||| ||||| || |||||||||||||||||||||  ||  |||||||||||    
T  37868526 atagcggaaacttgatagcgggtggcccaatggatcttggagaggctatgataccatcttaaaaatcgtggttaggcctaacacaa 37868611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 7669562 - 7669495
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaat 73  Q
    |||||| ||||| |||||| |||||| | |||||||||||  ||||||| ||||||||||||||||||    
T  7669562 cgatagtggaaacctgatagcaggtggctcaatggatcttgaagagactttgataccatcttaaaaat 7669495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 10615537 - 10615470
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaat 73  Q
    |||||||||||| |||||| ||||||   ||||||||||| ||||| |||||||||||||||| ||||    
T  10615537 cgatagcggaaacctgatatcaggtggtacaatggatcttggagaggctctgataccatcttagaaat 10615470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 12317189 - 12317102
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaa 93  Q
    ||||| |||||| ||||||||||||| ||||| | ||| |  |||| |||||||||||||||| |||||||  ||| |||||||||||    
T  12317189 cgataacggaaacctgataacaggtggcccaaagaatcgtgaagagtctctgataccatcttagaaatcgtggttgggcctaacacaa 12317102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 11232162 - 11232224
Alignment:
Q  33 cccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||||| ||||| |||||||||||||||| |||| ||  ||| |||||||||||||    
T  11232162 cccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaacc 11232224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 31079516 - 31079602
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacaca 92  Q
    |||||| ||||||||||||||| |||  ||||||||||||  ||||  | ||||||||||||| ||||| | |||| ||||||||||    
T  31079516 cgatagtggaaatctgataacatgtggtccaatggatcttgtagaggttttgataccatcttagaaatctttattgggcctaacaca 31079602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 19256761 - 19256850
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| ||||||||||||| ||||| | ||| |  |||| |||||||||||| ||| |||||||  ||| |||||||||||||    
T  19256761 cgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaacc 19256850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 34842821 - 34842732
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| ||| ||||||| ||||||| | ||| |  |||| |||||||||||| ||| |||||||  |||||||||||||||||    
T  34842821 cgataacggaaacctggtaacaggcgacccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgagcctaacacaacc 34842732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 10614908 - 10614980
Alignment:
Q  34 ccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcg 106  Q
    |||||||||||| ||||| || ||||| ||||||| |||||||  |||||||||| ||||||  |||||||||    
T  10614908 ccaatggatcttggagaggctatgatatcatcttataaatcgtggttgagcctaatacaaccccacaaaatcg 10614980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 15042826 - 15042916
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatctt--agagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||| |||||| |||||| ||||||| |||||  |||||| || ||||| ||||||| |||||||  ||  |||||||||||||    
T  15042826 gatagcggaaacctgatagcaggtggcccaatgaatcttggagagaggctatgataacatcttagaaatcgtggttaggcctaacacaacc 15042916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 4828211 - 4828122
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| ||||||||||||| ||||| | ||| |  |||| |||||||||||| ||| | |||||  ||| |||||||||||||    
T  4828211 cgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagagatcgtggttgggcctaacacaacc 4828122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 16050172 - 16050083
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||||||||||||||||| ||||| | ||| |  |||| |||||||||||| ||| || ||||  ||| | |||||||||||    
T  16050172 cgataacggaaatctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaagtcgtggttgggtctaacacaacc 16050083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 20094737 - 20094806
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgt 76  Q
    ||||||| ||| ||||||  ||||| |||||||||||||  ||| |||||||||||| |||| |||||||    
T  20094737 gatagcgaaaacctgataggaggtggcccaatggatcttgaagaaactctgataccaacttataaatcgt 20094806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 90
Target Start/End: Complemental strand, 12688207 - 12688131
Alignment:
Q  14 gaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaaca 90  Q
    |||| |||||| |||||| |||||||||||||  |||| |||| ||| ||||||| |||||||  ||||| ||||||    
T  12688207 gaaacctgatagcaggtggcccaatggatcttgaagaggctctaatatcatcttagaaatcgtgtttgagtctaaca 12688131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 35682957 - 35683021
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaa 70  Q
    |||||||||||| || ||| |||||| ||||||||||||| ||||  || ||||||||| |||||    
T  35682957 cgatagcggaaacctaatagcaggtggcccaatggatcttggagatgctatgataccatattaaa 35683021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 36917409 - 36917469
Alignment:
Q  35 caatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||| ||||| |||||||||||||||| |||| ||  ||| || ||||||||||    
T  36917409 caatggatcttggagaggctctgataccatcttagaaatggtggttgtgcttaacacaacc 36917469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 38668268 - 38668170
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaat 104  Q
    ||||||| |||| ||||||||||||||||||||||||| | ||||| |||||||||||||||| |||| || |||| |||||||||||||  |||||||    
T  38668268 cgatagcagaaacctgataacaggtgacccaatggatcatggagaggctctgataccatcttagaaattgtgattgggcctaacacaaccccacaaaat 38668170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 38733293 - 38733207
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaa 93  Q
    ||||||||||| |||||| ||||||  |||||||||||| |||||||||||||||||||||| |||||||  |||| ||||||||||    
T  38733293 gatagcggaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaatcgtggttgaacctaacacaa 38733207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 26177051 - 26176962
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||||||||||| |||||| ||||||||||||| ||||| |||||||| ||||||| ||||||   ||| |||||||||||||    
T  26177051 cgatagcggaaatctgatagcaggtggcccaatggatcttggagaggctctgatatcatcttagaaatcgcggttgggcctaacacaacc 26176962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 30369978 - 30369889
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||| ||||| |||||| |||||||||||||||||||| ||||| ||||||||| |||||| |||||||  ||| |||||||||||||    
T  30369978 cgatagtggaaacctgatagcaggtgacccaatggatcttggagaggctctgatacaatcttagaaatcgtggttgggcctaacacaacc 30369889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 31496312 - 31496401
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||| || |||||| ||||||  ||||||||||||| ||||||||| |||| |||||| ||||||| |||||| |||||||||||    
T  31496312 cgatagcgggaacctgatagcaggtggtccaatggatcttaaagagactctaatactatcttagaaatcgtgattgagtctaacacaacc 31496401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 16163076 - 16162976
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 105  Q
    |||||||||||| |||||| |||||| |||| |||||||| ||||| || ||||| |||||||||||| ||  ||||| |||||||||||  ||||||||    
T  16163076 cgatagcggaaacctgatagcaggtggcccattggatcttggagaggctttgatatcatcttaaaaattgtggttgagtctaacacaaccccacaaaatc 16162977  T
Q  106 g 106  Q
    |    
T  16162976 g 16162976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 27413490 - 27413390
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 105  Q
    ||||||||||||||||||||||||||  | ||| |||||| ||||| |||||||| ||||||| |||||||  |||  ||||||||||||  ||||||||    
T  27413490 cgatagcggaaatctgataacaggtggtctaatagatcttggagaggctctgatatcatcttagaaatcgtggttggacctaacacaacctcacaaaatc 27413391  T
Q  106 g 106  Q
    |    
T  27413390 g 27413390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 4112714 - 4112783
Alignment:
Q  4 ttcgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaat 73  Q
    |||||||||||||| |||||| ||||||  |||||||||||| ||||| |||||||||||||||| ||||    
T  4112714 ttcgatagcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccatcttagaaat 4112783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 33156877 - 33156787
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| ||||||| |||| ||||||| ||| || |||| ||||||||||| |||||||  ||| |||||||||||||    
T  33156877 cgatagcggaaacctgatagcaggtgaaccaacggatcttggagtaggctctaataccatcttagaaatcgtggttgggcctaacacaacc 33156787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 35772172 - 35772083
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagaga-gactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| ||| || ||||||||||||| |||| | |||||||||||||||| |||||||  ||| |||||||||||||    
T  35772172 cgatagcggaaacctgatagcagatggcccaatggatctt-gagaaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 35772083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 4098344 - 4098433
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||| |||| |||||  |||||| |||||||||||||  |||| ||||||||||| |||| |||||||  ||| |||||||||||||    
T  4098344 cgatagcagaaacctgattgcaggtggcccaatggatcttgaagagtctctgataccaacttagaaatcgtggttgggcctaacacaacc 4098433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 51460383 - 51460472
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||| ||||||||||||| ||||| |||||||| ||| ||| ||||  |  ||| |||||||||||||    
T  51460383 cgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgatatcattttagaaattatggttgggcctaacacaacc 51460472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 5109358 - 5109306
Alignment:
Q  41 atcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaa 93  Q
    ||||| ||||||||||||||||||||||||||| |||||||  ||||||||||    
T  5109358 atcttggagagactctgataccatcttaaaaattgtaattggacctaacacaa 5109306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 52961490 - 52961426
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaa 70  Q
    |||||||||||| |||||| |||||| |||||||||||||  |||| ||||||||||| ||||||    
T  52961490 cgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgataccaacttaaa 52961426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 4112949 - 4113036
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||| ||||||   |||| | ||||||||||| ||||| ||| |||||||||||| |||||||  ||| |||||||||||||    
T  4112949 atagcggaaacctgatagatggtggctcaatggatcttggagaggctccgataccatcttagaaatcgtggttgggcctaacacaacc 4113036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 8870865 - 8870940
Alignment:
Q  20 tgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| |||||||||| || |||||||||||||||||||||| |||| ||  |||  ||||||||||||    
T  8870865 tgatagcaggtggcccaatggatattggagagactctgataccatcttagaaatggtggttggacctaacacaacc 8870940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 39348293 - 39348382
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||| ||||| |||||| |||||| ||||||||| ||| ||| || |||||||||||||||| |||||||  ||| |||||||||||||    
T  39348293 cgatagtggaaacctgatagcaggtggcccaatggaccttggaggaggctctgataccatcttagaaatcgt-gttgggcctaacacaacc 39348382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 17402697 - 17402636
Alignment:
Q  34 ccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| ||||  ||||||||||||||||||||||||  | | |||||||||||||    
T  17402697 ccaatggatcttggagatgctctgataccatcttaaaaatcgtggtcgggcctaacacaacc 17402636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 32783223 - 32783292
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgt 76  Q
    |||||| |||| |||||| ||||||   |||||||||||  ||||||||||||||||||||| |||||||    
T  32783223 gatagcagaaacctgatagcaggtggtacaatggatcttgaagagactctgataccatcttagaaatcgt 32783292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 369774 - 369714
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatc 65  Q
    |||||||||||| |||||| ||| ||| |||||||||||||||| || |||||||||||||    
T  369774 cgatagcggaaacctgatagcagctgatccaatggatcttagagtaggctctgataccatc 369714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 17452790 - 17452858
Alignment:
Q  27 aggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||||||| |||||||| |||| ||||||||||| |||||||  ||  |||||||||||||    
T  17452790 aggtggcccaatggattttagagaggctctaataccatcttagaaatcgtggttaggcctaacacaacc 17452858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 51460004 - 51460080
Alignment:
Q  19 ctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||| |||||| ||||||||||||| ||||| | || ||||||||||| |||| ||  ||| |||||||||||||    
T  51460004 ctgatagcaggtggcccaatggatcttggagaggcgctaataccatcttagaaattgtggttgggcctaacacaacc 51460080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 35892199 - 35892129
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgt 76  Q
    ||||||| ||||| ||||| || ||| ||||||| |||||  ||||||||||||||| ||||| |||||||    
T  35892199 cgatagcagaaatatgatagcaagtggcccaatgaatcttgaagagactctgataccttcttagaaatcgt 35892129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 25145661 - 25145750
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| |||||| ||||||   |||| |||||| ||||| |||||||| ||||||| ||||| |  ||| |||||||||||||    
T  25145661 cgataacggaaacctgatagcaggtgggtcaatagatcttggagaggctctgatatcatcttagaaatcatggttgggcctaacacaacc 25145750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 25713301 - 25713248
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgat 59  Q
    ||||||||||||  ||||| |||||| ||||||||||||| ||||| |||||||    
T  25713301 cgatagcggaaacttgatagcaggtggcccaatggatcttggagaggctctgat 25713248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 47370641 - 47370694
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgata 60  Q
    |||||| ||||||||||| ||| |||  |||||||||||||||||||| |||||    
T  47370641 gatagcagaaatctgatagcagatgattcaatggatcttagagagactgtgata 47370694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 51589949 - 51589849
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 105  Q
    ||||| |||||| || |||| ||||| ||||| | ||| |  |||| |||||||||||| ||| |||||||  ||| |||||||||||||  ||||||||    
T  51589949 cgataacggaaacctaataataggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaatc 51589850  T
Q  106 g 106  Q
    |    
T  51589849 g 51589849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 13353344 - 13353255
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| ||  ||| |||||||||||||    
T  13353344 cgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaacc 13353255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 33796469 - 33796380
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| ||  ||| |||||||||||||    
T  33796469 cgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaacc 33796380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 12330120 - 12330209
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||| ||||||| |||||| |||||| ||||||||||||| ||||| |||||||||||| ||| |||||||  ||| |||||||||||||    
T  12330120 cgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggttgggcctaacacaacc 12330209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 112
Target Start/End: Complemental strand, 3680155 - 3680049
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 105  Q
    |||||||||||| || ||| |||||||||| |||||| || |||||  ||||||||||||||| |||| ||  ||| |||||||||||||  ||||||||    
T  3680155 cgatagcggaaacctaatagcaggtgacccgatggattttggagagggtctgataccatcttagaaattgtggttgggcctaacacaaccccacaaaatc 3680056  T
Q  106 gaattgt 112  Q
    || ||||    
T  3680055 gacttgt 3680049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 11085726 - 11085635
Alignment:
Q  4 ttcgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||||| |||||| |||||| ||||| | ||||| ||||| |||| | ||||||||| ||||||| ||||  ||||||||||||    
T  11085726 ttcgatagcggaaacctgatagcaggtggcccaacgtatcttggagaggctctaaaaccatcttagaaatcgtgattggacctaacacaacc 11085635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 6237648 - 6237737
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| ||| || || |||  ||||||||||||  ||||||||| ||||||||||| || |||| |||||| |||||||||||    
T  6237648 cgatagcggaaacctggtagcaagtggtccaatggatcttgaagagactctaataccatcttagaagtcgtgattgagtctaacacaacc 6237737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 6542884 - 6542973
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| |||||| || |||||||||||||||||  |||| |||||||||||||||  |||||||  ||| | |||||||||||    
T  6542884 cgataacggaaacctgatagcaagtgacccaatggatcttgaagaggctctgataccatctttgaaatcgtggttgggtctaacacaacc 6542973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 17147837 - 17147894
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccat 64  Q
    ||||||||||| |||||| ||||||||||||||||| || ||||| ||||||||||||    
T  17147837 gatagcggaaacctgatagcaggtgacccaatggatgttggagaggctctgataccat 17147894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 33494682 - 33494593
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||| ||||| |||||| |||||||||||||||||||   ||||  ||||||||||||||| |||| ||  ||| |||||||||||||    
T  33494682 cgatagtggaaacctgatagcaggtgacccaatggatctcgaagaggttctgataccatcttagaaatggtggttgggcctaacacaacc 33494593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 8001496 - 8001592
Alignment:
Q  12 cggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcga 107  Q
    |||||| |||||| |||||| ||||| |||||||  || ||||||||||||||||||| |||| ||  ||| |||||||||||||  ||||||||||    
T  8001496 cggaaacctgatagcaggtggcccaacggatctttaaggagactctgataccatcttagaaattgtggttgggcctaacacaacccaacaaaatcga 8001592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 30505645 - 30505581
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaa 70  Q
    |||||| ||||| |||||| |||||||||||||| ||||| ||||| |||||||||||| |||||    
T  30505645 cgataggggaaacctgatagcaggtgacccaatgcatcttggagaggctctgataccatgttaaa 30505581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 33631746 - 33631814
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatc 74  Q
    ||||||| |||| |||||| ||||||||||||| |||||| ||||  |||||||| |||||||||||||    
T  33631746 cgatagcagaaacctgatatcaggtgacccaatagatcttggagatgctctgatatcatcttaaaaatc 33631814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 27993583 - 27993654
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagaga-gactctgataccatcttaaaaatcgta 77  Q
    ||||||||||| ||||| | | |||||| |||||||||| |||| |||||||||||||| ||||||||||||    
T  27993583 gatagcggaaacctgatgataagtgacctaatggatcttggagaagactctgataccattttaaaaatcgta 27993654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 4868753 - 4868843
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| |||||| |||||| ||||  ||||||| ||| || |||||||||||||||| |||||||  ||| |||||||||||||    
T  4868753 cgataacggaaacctgatagcaggtggcccagcggatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 4868843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 32290871 - 32290773
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaat 104  Q
    |||||||| ||||||||||  ||||| ||| |||||| || ||||  |||| ||||||||||| |||||||  ||  ||||||||||||| ||||||||    
T  32290871 cgatagcgaaaatctgatagtaggtggcccgatggatattggagatgctctaataccatcttagaaatcgttgtttggcctaacacaaccctacaaaat 32290773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 7638790 - 7638878
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||| |||||| ||||||| ||||| |||||| ||||  |||||||| | ||||| ||||| || |||  ||||||||||||    
T  7638790 gatagcggaaacctgatagcaggtgatccaatagatcttggagaagctctgatatcttcttagaaatcatagttggacctaacacaacc 7638878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 21690865 - 21690765
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 105  Q
    ||||| ||||||  |||||||||||| ||||| | ||| |  |||| || ||||||||| ||| |||||||  |||||||||||||||||  ||||||||    
T  21690865 cgataacggaaacatgataacaggtggcccaaagaatcgtgaagaggctttgataccatattagaaatcgtggttgagcctaacacaaccccacaaaatc 21690766  T
Q  106 g 106  Q
    |    
T  21690765 g 21690765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 103
Target Start/End: Complemental strand, 3921699 - 3921604
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaa 103  Q
    ||||||||||  ||||| ||||||| ||||||||||||  |||| |||||||||||| ||| ||||| |  || | |||||||| ||| |||||||    
T  3921699 atagcggaaacttgatagcaggtgatccaatggatcttgaagaggctctgataccatattagaaatcatggttaaacctaacacgaccctacaaaa 3921604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 30849346 - 30849417
Alignment:
Q  9 tagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaatt 80  Q
    ||||||||| || ||| ||||||  ||||||||||||| || |||| ||||| ||||||| |||||||||||    
T  30849346 tagcggaaacctaatagcaggtggtccaatggatcttaaagggactttgatatcatcttagaaatcgtaatt 30849417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 6400796 - 6400865
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgt 76  Q
    ||||||| |||| |||||| ||||||||||| | ||| || ||||| || |||||||||||||||||||||    
T  6400796 cgatagcagaaacctgatagcaggtgaccca-tagattttggagaggctttgataccatcttaaaaatcgt 6400865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 31961086 - 31961032
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgata 60  Q
    ||||||| |||| |||||| |||||| ||||||||||||| ||||| ||||||||    
T  31961086 cgatagcagaaacctgatagcaggtggcccaatggatcttggagaggctctgata 31961032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 10145735 - 10145788
Alignment:
Q  50 agactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaa 103  Q
    ||||||||||| ||||||| |||| ||  ||||||||||||||||| |||||||    
T  10145735 agactctgatatcatcttagaaattgtggttgagcctaacacaaccctacaaaa 10145788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 19712853 - 19712773
Alignment:
Q  12 cggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacaca 92  Q
    |||||| ||||||||||||| ||||| | ||| |  |||| |||||||||||||||| |||| ||  ||| ||||||||||    
T  19712853 cggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatcttagaaatggtggttgggcctaacaca 19712773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 104
Target Start/End: Complemental strand, 20373667 - 20373615
Alignment:
Q  52 actctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaat 104  Q
    ||||||||||||||||| |||||||  ||| |||||||||||||  |||||||    
T  20373667 actctgataccatcttataaatcgtggttgggcctaacacaaccccacaaaat 20373615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 5e-22; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 93295 - 93384
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| |||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||||||  ||| |||||||||||||    
T  93295 cgataacggaaagctgatagcaggtggcccaatggatcttggagaggctctgataccatcttaaaaatcgtggttgggcctaacacaacc 93384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 16419411 - 16419321
Alignment:
Q  5 tcgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||||| |||||| |||||| ||||||||||||| ||||| |||||||||||||||| |||||||  ||| |||||| ||||||    
T  16419411 tcgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaatacaacc 16419321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 14466351 - 14466440
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| ||||||||| ||| ||||||||||||| ||||| |||||||||||||||| |||| ||  ||| |||||||||||||    
T  14466351 cgatagcggaaacctgataacaagtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaacc 14466440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 15124724 - 15124843
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 105  Q
    ||||| || ||| |||||| ||||||  |||||||||||| |||||||||||||||||||||| |||||||  ||| | |||||||||||  |||||| |    
T  15124724 cgataacgaaaacctgatagcaggtggtccaatggatcttggagagactctgataccatcttagaaatcgtggttgggtctaacacaaccccacaaaacc 15124823  T
Q  106 gaattgtaaaatgcagattg 125  Q
    ||||||| || || ||||||    
T  15124824 gaattgtgaagtgaagattg 15124843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 93
Target Start/End: Original strand, 40149177 - 40149264
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaa 93  Q
    ||||||| ||||||||||| ||||||||||||||||||||  |||| |||||||||||||||| |||| ||  ||| |||||||||||    
T  40149177 cgatagctgaaatctgatagcaggtgacccaatggatcttgaagaggctctgataccatcttagaaattgtggttgggcctaacacaa 40149264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 2029912 - 2029823
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| || ||| |||||| ||||||||||||| ||||| |||||||||||||||| |||||||  ||| |||||| ||||||    
T  2029912 cgatagcggaaacctaatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaaaacaacc 2029823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 36352100 - 36352189
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| ||||||||||||| ||| |||||||||  ||||||||| |||||||||||||||| ||  |||| ||||||||||||    
T  36352100 cgataacggaaacctgataacaggtggcccgatggatcttgaagagactctaataccatcttaaaaattgtggttgaacctaacacaacc 36352189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 2375104 - 2375190
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacaca 92  Q
    ||||| || |||||||||| |||||||||||||| ||| |  | ||||||||||| ||||||||||||| | |||||||||||||||    
T  2375104 cgataacgaaaatctgatagcaggtgacccaatgaatcctgaaaagactctgatatcatcttaaaaatcttgattgagcctaacaca 2375190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 93568 - 93657
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| ||||||  ||||||||||||||||||| || ||  ||||||||||||||| |||||||  ||| |||||||||||||    
T  93568 cgataacggaaacctgatagtaggtgacccaatggatcttggaaaggttctgataccatcttagaaatcgtggttgggcctaacacaacc 93657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 40379385 - 40379474
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||| ||||| |||||| |||||| || |||||||||| || || |||||||||||||||| |||||||  ||| |||||||||||||    
T  40379385 cgatagaggaaacctgatagcaggtggcctaatggatcttggaaaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 40379474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 42895391 - 42895316
Alignment:
Q  6 cgatagcggaaatctgataacaggtgaccc-aatggatcttagagagactctgataccatcttaaaaatcgtaatt 80  Q
    ||||||||||||  ||||| |||||| ||| |||||||||||||||| ||||||||||||| || |||||||||||    
T  42895391 cgatagcggaaacttgatatcaggtggccctaatggatcttagagaggctctgataccatcatagaaatcgtaatt 42895316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 5594166 - 5594083
Alignment:
Q  11 gcggaaatctgataacaggtg--acccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaa 93  Q
    ||||||| |||||| ||||||  ||||||||||||||  |||| ||||||||| ||||| |||||||| ||||||||||||||||    
T  5594166 gcggaaacctgatagcaggtgtgacccaatggatcttgaagaggctctgatactatctt-aaaatcgtgattgagcctaacacaa 5594083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 17719542 - 17719454
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| ||||| |||||| |||||| || |||||||||| |||||||| ||||||||||||| |||| ||  ||| ||| |||||||||    
T  17719542 gataggggaaacctgatagcaggtggccaaatggatcttggagagactttgataccatcttagaaattgtggttgggccgaacacaacc 17719454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 38629985 - 38629897
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaa 93  Q
    |||||||||||| || |||  ||||||||||  ||||||| ||| || |||||||||||||||||||||||| ||||| | ||||||||    
T  38629985 cgatagcggaaacctaatagaaggtgacccatcggatcttggaggaggctctgataccatcttaaaaatcgtgattgaacataacacaa 38629897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 33606231 - 33606314
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaaca 90  Q
    ||||||||||| |||||| || |||||||||| ||||||  ||||||| ||||| ||||||| |||||||  ||| ||||||||    
T  33606231 gatagcggaaacctgatagcaagtgacccaatagatcttgaagagactttgatatcatcttagaaatcgtggttgtgcctaaca 33606314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 34893568 - 34893506
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatctta 68  Q
    |||||||| ||| ||||||  ||||| ||||||||||||| ||||| ||||||||||||||||    
T  34893568 cgatagcgaaaacctgatagtaggtggcccaatggatcttggagaggctctgataccatctta 34893506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 2324383 - 2324294
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| ||||||||||||| |||||   ||| |  |||| |||||||||||| |||||||||||  ||| |||||||||||||    
T  2324383 cgataacggaaacctgataacaggtggcccaaacaatcgtgaagaggctctgataccatattaaaaatcgtggttgggcctaacacaacc 2324294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 52 - 95
Target Start/End: Complemental strand, 10571067 - 10571024
Alignment:
Q  52 actctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||||||||| |||||||  |||||||||||||||||    
T  10571067 actctgataccatcttagaaatcgtggttgagcctaacacaacc 10571024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 13210670 - 13210607
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttaga-gagactctgataccatctta 68  Q
    |||||| |||||||||||| || ||| ||||||||||||| || ||| ||||||||||||||||    
T  13210670 cgatagaggaaatctgatagcatgtggcccaatggatcttggaggagtctctgataccatctta 13210607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 26237194 - 26237151
Alignment:
Q  27 aggtgacccaatggatcttagagagactctgataccatcttaaa 70  Q
    |||||| |||||||||||| || |||||||||||||||||||||    
T  26237194 aggtgaaccaatggatcttggatagactctgataccatcttaaa 26237151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 29718445 - 29718382
Alignment:
Q  32 acccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||||||||| |||||||| ||||||||||| |||| |||||||  ||  |||||||||||||    
T  29718445 acccaatggattttagagaggctctgataccaacttagaaatcgtggttaggcctaacacaacc 29718382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 43319802 - 43319751
Alignment:
Q  26 caggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgt 76  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||| |||||||    
T  43319802 caggtgacccaattgatctttgaggagactctgataccatcttataaatcgt 43319751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 112
Target Start/End: Complemental strand, 24395978 - 24395900
Alignment:
Q  34 ccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcgaattgt 112  Q
    ||||||||||||  |||| |||||||||| ||||| |||||||  ||  |||||||||||||  |||||||||| ||||    
T  24395978 ccaatggatcttgaagaggctctgataccctcttagaaatcgtggtttggcctaacacaaccccacaaaatcgatttgt 24395900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 37812444 - 37812502
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccat 64  Q
    ||||||| |||| |||||| |||||| ||||||||||||| ||||| ||| ||||||||    
T  37812444 cgatagcagaaacctgatagcaggtggcccaatggatcttggagaggctccgataccat 37812502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 5509222 - 5509133
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| ||||||||||||| ||||| | ||| |  |||| |||||||||||| ||| ||||| |  ||| |||||||||||||    
T  5509222 cgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcatggttgggcctaacacaacc 5509133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 16533455 - 16533366
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||| ||| |||||| |||||  |||||||||||||  |||| |||||||||||| ||| || ||||| ||| |  ||||||||||    
T  16533455 cgatagcgaaaacctgatagcaggtagcccaatggatcttgaagaggctctgataccattttagaagtcgtagttgggtgtaacacaacc 16533366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 13250200 - 13250284
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacaca 92  Q
    ||||| |||| || |||| ||||||||||||||||||| || |  |||| ||| ||||||| |||||||| |||  |||||||||    
T  13250200 atagcagaaaccttataaaaggtgacccaatggatcttggaaaagctctaatatcatcttagaaatcgtatttggacctaacaca 13250284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 6 - 93
Target Start/End: Complemental strand, 21861437 - 21861350
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaa 93  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| ||  ||| |||||||||||    
T  21861437 cgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaa 21861350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 25620277 - 25620190
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||| |||||| |||||| ||||||||||||| ||||| |||||||||||||||| |||||||  ||| |||||||||||||    
T  25620277 atagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 25620190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 29469748 - 29469659
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||  ||||||||||||| ||||||||||||| ||||| |||||||||||| ||| |||||||  ||| |||||||||||||    
T  29469748 cgatagcggaagcctgataacaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtggttgggcctaacacaacc 29469659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 36277167 - 36277273
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 105  Q
    |||||||||||| ||||||  ||||| ||||||||||||| ||||| |||||||| ||||||| |||||||  ||| | |||||||||||  ||||||||    
T  36277167 cgatagcggaaacctgatagtaggtggcccaatggatcttggagaggctctgataacatcttagaaatcgtggttgggactaacacaaccccacaaaatc 36277266  T
Q  106 gaattgt 112  Q
    || ||||    
T  36277267 gacttgt 36277273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 1596736 - 1596647
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| ||||||||| ||| ||||||||||||| ||||| |||||||||||||||| |||| ||  ||  |||||||||||||    
T  1596736 cgatagcggaaacctgataacatgtggcccaatggatcttggagaggctctgataccatcttagaaattgtggttaggcctaacacaacc 1596647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 4507074 - 4506986
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||| ||||||||||||| ||||||||||||||||||||  | || ||||||||| |||||| |||||||| ||| | |||||||||||    
T  4507074 gataacggaaatctgatagcaggtgacccaatggatcttgaaaaggctctgatacaatcttagaaatcgtagttgggtctaacacaacc 4506986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 4886458 - 4886383
Alignment:
Q  20 tgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| ||||||||||||| ||||||| |||||||||||||| |||||||  ||| |||||||||||||    
T  4886458 tgatagcaggtggcccaatggatcttggagagaccctgataccatcttagaaatcgtggttgggcctaacacaacc 4886383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 33834334 - 33834245
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||| | ||| |||||| |||||| ||||||||||||| ||||| |||||||||||||||| |||| ||  ||| |||||||||||||    
T  33834334 cgatagggaaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaacc 33834245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 2404351 - 2404435
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacaca 92  Q
    |||||||||| |||||| ||||||||||||||||| |   |||| |||||||||||||||| |||||||  |||||| |||||||    
T  2404351 atagcggaaacctgatagcaggtgacccaatggatttcgaagaggctctgataccatcttagaaatcgtggttgagcttaacaca 2404435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 22574744 - 22574661
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaac 89  Q
    ||||||| |||| |||||| |||||| ||||||||||||| |||||||||| |||||||| || |||| ||  |||||||||||    
T  22574744 cgatagctgaaacctgatagcaggtggcccaatggatcttggagagactcttataccatcatagaaattgtggttgagcctaac 22574661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 44874526 - 44874581
Alignment:
Q  13 ggaaatctgataacaggtgacccaatggatcttagagagactctgataccatctta 68  Q
    ||||| |||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  44874526 ggaaacctgatagcaggtgacccaatggatcttgaagagactctgataccatctta 44874581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 36993251 - 36993317
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatc 74  Q
    ||||||||||||||||| || ||| |||||||||||||  |||| |||||||||||||||| |||||    
T  36993251 atagcggaaatctgatagcacgtggcccaatggatcttgaagaggctctgataccatcttagaaatc 36993317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 10882180 - 10882269
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    ||||| |||||| ||||||||||||| ||||| | ||| |  |||| |||||||||||||||| |||||||  ||| |||||||||||||    
T  10882180 cgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 10882269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 33996255 - 33996340
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaac 94  Q
    |||| ||||||| |||||| |||||| ||||||||||    ||||| |||||||||||||||| |||||||  ||| ||||||||||||    
T  33996255 cgattgcggaaacctgatagcaggtggcccaatggatg---gagaggctctgataccatcttagaaatcgtggttgggcctaacacaac 33996340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 3519980 - 3520069
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||| ||| | |||| |||||| ||||||||||| | ||||| ||||||||||| || | |||||||  |||| ||||||||||||    
T  3519980 cgatagcgaaaaccagatagcaggtggcccaatggatcatggagaggctctgataccaactaagaaatcgtggttgaacctaacacaacc 3520069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 76
Target Start/End: Complemental strand, 20305437 - 20305363
Alignment:
Q  6 cgatagcggaaatctgataacaggtgaccca----atggatcttagagagactctgataccatcttaaaaatcgt 76  Q
    |||||||||||| |||||| ||| |||||||    |||||||||  |||| ||||||||||||||||||||||||    
T  20305437 cgatagcggaaacctgatagcagatgacccatccaatggatcttgaagaggctctgataccatcttaaaaatcgt 20305363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 10903228 - 10903140
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaac 94  Q
    ||||||||||||  |||||||||||| ||||||||||||| ||||  |||||||| ||| |||  ||||||  ||| | ||||||||||    
T  10903228 cgatagcggaaacatgataacaggtggcccaatggatcttggagaagctctgatatcattttagtaatcgtggttggggctaacacaac 10903140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 26562015 - 26562103
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||| |||||| ||||||||||||| ||||| | ||| |  ||||||||||||||||| ||| |||| ||  |||||||||||| ||||    
T  26562015 gataacggaaacctgataacaggtggcccaaagaatcgtgaagagactctgataccatattagaaatggtggttgagcctaacataacc 26562103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 5871896 - 5871967
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgt 76  Q
    ||||||||||||| ||||| |||||||| ||||||||||||  | || |||||||| ||||||| |||||||    
T  5871896 cgatagcggaaatatgatagcaggtgactcaatggatcttaacgcaggctctgatatcatcttagaaatcgt 5871967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 76
Target Start/End: Original strand, 35308452 - 35308487
Alignment:
Q  41 atcttagagagactctgataccatcttaaaaatcgt 76  Q
    |||||| |||||||||||||||||||||||||||||    
T  35308452 atcttaaagagactctgataccatcttaaaaatcgt 35308487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 9689045 - 9689099
Alignment:
Q  10 agcggaaatctgataacaggtgacccaatggatcttagagagactctgataccat 64  Q
    |||||||| |||||| ||||||  |||||||||||| ||||| ||||||||||||    
T  9689045 agcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccat 9689099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 21821947 - 21821849
Alignment:
Q  8 atagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcg 106  Q
    |||||||||| ||| || ||| || ||||| | |||||  |||| |||||||||||||||| |||||||  ||| ||||||||||| |  |||||||||    
T  21821947 atagcggaaacctgctagcagttggcccaacgtatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaatcg 21821849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 1936289 - 1936330
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttaga 48  Q
    ||||||||||| ||||||||||||||  ||||||||||||||    
T  1936289 gatagcggaaacctgataacaggtgattcaatggatcttaga 1936330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 26239857 - 26239946
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||| |||||| |||||| |||||| ||||| ||||||| ||| || |||||||||||||||| |||| ||  ||| | |||||||||||    
T  26239857 gataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaattgtggttgggtctaacacaacc 26239946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 28080806 - 28080737
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgt 76  Q
    |||||||||||  ||||| |||||| |||||| ||||||  |||| |||||||| ||||||| |||||||    
T  28080806 gatagcggaaacttgatagcaggtggcccaatagatcttgaagaggctctgatatcatcttagaaatcgt 28080737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 2544389 - 2544494
Alignment:
Q  5 tcgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaat 104  Q
    |||||| |||||| || |||||||||| ||||| | ||| |  |||||||  |||||||| |||||||||||  ||| |||||||||||||  ||||||     
T  2544389 tcgataacggaaacctaataacaggtggcccaaagaatcgtgaagagact--gataccatattaaaaatcgtggttgggcctaacacaaccccacaaaac 2544486  T
Q  105 cgaattgt 112  Q
    ||| ||||    
T  2544487 cgacttgt 2544494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 78
Target Start/End: Complemental strand, 17948377 - 17948305
Alignment:
Q  7 gatagcggaaatctgataacaggtgacccaatggatcttagag-agactctgataccatcttaaaaatcgtaa 78  Q
    ||||||||||||||||||| | |||||||||   ||||| ||| || |||||||||||||||| |||| ||||    
T  17948377 gatagcggaaatctgataataagtgacccaacaaatcttggagtaggctctgataccatcttagaaattgtaa 17948305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 18826428 - 18826528
Alignment:
Q  5 tcgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaat 104  Q
    |||||||||||||| ||||| ||| || | || ||||||||  |||| |||||||| ||||||| ||||  |  |||| ||||||||||||  |||||||    
T  18826428 tcgatagcggaaatttgatagcagatggctcagtggatcttgaagaggctctgatatcatcttagaaattatggttgaacctaacacaaccccacaaaat 18826527  T
Q  105 c 105  Q
    |    
T  18826528 c 18826528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 41145 - 41247
Alignment:
Q  4 ttcgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaa 103  Q
    |||||||||| |||  ||||| |||||| ||||||| ||||| ||||| |||||||||||||||| |||||||| |||||||||| ||||||  ||||||    
T  41145 ttcgatagcgcaaacttgatagcaggtggcccaatgaatcttggagaggctctgataccatcttagaaatcgtagttgagcctaatacaaccccacaaaa 41244  T
Q  104 tcg 106  Q
    |||    
T  41245 tcg 41247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 5695 - 5784
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||| | ||||||||||| ||||| |||||||||||||||| |||||||  ||| |||||||||||||    
T  5695 cgatagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaacc 5784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 14446 - 14357
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||||||  || ||||||||||||| ||||| |||||||||||||||| ||| |||  ||| |||||||||||||    
T  14446 cgatagcggaaacctgataacatatggcccaatggatcttggagaggctctgataccatcttagaaaacgtggttgggcctaacacaacc 14357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 81978 - 81877
Alignment:
Q  13 ggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatcgaattgt 112  Q
    ||||| ||||||||||||   |||||||||||| ||||| |||||||||||||||| |||||||  ||| |||||||||||||  |||||| ||| ||||    
T  81978 ggaaacctgataacaggtagtccaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaaccgacttgt 81879  T
Q  113 aa 114  Q
    ||    
T  81878 aa 81877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 5801 - 5709
Alignment:
Q  3 attcgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||| |||||| |||||| |||||| |||||||||| ||  |||| |||||||||||||||| |||||||  ||| | |||||||||||    
T  5801 attcgataacggaaacctgatagcaggtggcccaatggattttgaagaggctctgataccatcttagaaatcgtggttgggtctaacacaacc 5709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 112
Target Start/End: Complemental strand, 12790 - 12684
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaaccatacaaaatc 105  Q
    |||||||| ||  ||||||  ||||| ||||||  ||||| ||||||| || |||||||||||||||| ||  ||| |||||||||||||| ||||||||    
T  12790 cgatagcgaaatcctgatagtaggtggcccaatttatcttggagagacgctaataccatcttaaaaattgtggttgggcctaacacaaccacacaaaatc 12691  T
Q  106 gaattgt 112  Q
    || ||||    
T  12690 gacttgt 12684  T

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Target: scaffold0400 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 3988 - 3899
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||| |||| |||||||| |||||  ||||||||||| ||| |||| ||  ||| |||||||||||||    
T  3988 cgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgtgcctaacacaacc 3899  T

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Target: scaffold0365 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 4632 - 4543
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagagagactctgataccatcttaaaaatcgtaattgagcctaacacaacc 95  Q
    |||||||||||| |||||| |||||| |||| |||||||| |||||  ||||||||||| ||| |||| ||  ||| |||||||||||||    
T  4632 cgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgtgcctaacacaacc 4543  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 51408 - 51355
Alignment:
Q  14 gaaatctgataacaggtgacccaatggatcttagagagactctgataccatctt 67  Q
    |||| |||||| |||| ||||||||||||||| ||||  |||||||||||||||    
T  51408 gaaacctgatagcaggagacccaatggatcttggagaagctctgataccatctt 51355  T

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Target: scaffold0542 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 5773 - 5733
Alignment:
Q  5 tcgatagcggaaatctgataacaggtgacccaatggatctt 45  Q
    ||||||||| |||||||||| ||||||||||||| ||||||    
T  5773 tcgatagcgaaaatctgatagcaggtgacccaatagatctt 5733  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 73
Target Start/End: Original strand, 87750 - 87818
Alignment:
Q  6 cgatagcggaaatctgataacaggtgacccaatggatcttagaga-gactctgataccatcttaaaaat 73  Q
    |||||| ||||| |||||| |||||| ||||||| || ||||||| |||| ||||| ||||||||||||    
T  87750 cgatagtggaaacctgatagcaggtggcccaatgaattttagagaagactttgatatcatcttaaaaat 87818  T

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