View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17325_high_5 (Length: 370)
Name: NF17325_high_5
Description: NF17325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17325_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 40 - 362
Target Start/End: Complemental strand, 45955535 - 45955206
Alignment:
| Q |
40 |
ttattttataggtctacaatctgaagcatgaattttcctcacattagatggatggtgcattttgtttatcttataattaataaatgattttattattat- |
138 |
Q |
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| T |
45955535 |
ttattttataggtctacaatctgaagcatgaattttcctcacattagatggatggtgcattttctttatcttataattaataaatgattttattattatt |
45955436 |
T |
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| Q |
139 |
------attctaaaaaaggtgttaaaagatggagggaaatgaaaggctgtgaattgaagggaagtgaggtggaggtaagtcctagtcttatcgcaacata |
232 |
Q |
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| T |
45955435 |
attattattctaaaaaaggtgttaaaagatggagggaaatgaaaggctgtgaattgaagggaagtgaggtggaggtaagtcctagtcttatcgcaacata |
45955336 |
T |
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| Q |
233 |
ataagaggaaatgaaacacacttcaaacttcataattaatttcatcctatacacacctcacaaccaaacatggcaagattggtggcactccaacagaatc |
332 |
Q |
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| T |
45955335 |
ataagaggaaatgaaacacacttcaaacttcataattaatttcatcctatacacacctcacaaccaaacatggcaagattggtggcactccaacagaatc |
45955236 |
T |
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| Q |
333 |
aactatctttccctcctttagcttcatctc |
362 |
Q |
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||||||||||||||||||||||||| |||| |
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| T |
45955235 |
aactatctttccctcctttagcttcttctc |
45955206 |
T |
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