View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17326_high_41 (Length: 255)
Name: NF17326_high_41
Description: NF17326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17326_high_41 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 21 - 240
Target Start/End: Complemental strand, 27418812 - 27418593
Alignment:
| Q |
21 |
ccagatctcaagaaattctaatatatagaacagtattaaagtatcacaatccgttcaattatatgaattaattccaaaattaaaaagataagtttattgc |
120 |
Q |
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| T |
27418812 |
ccagatctcaagaaattctaatatatagaacagtattaaagtatcacaatccgttcaattatatgaattaattccaaaattaaaaagataagtttattgc |
27418713 |
T |
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| Q |
121 |
gtaaatttattgataaaacactaagagaaaacactcaagtatgagtgaaaaatcgggccaagtctgctgtgccatcccgttgaatccgcaatttccagcg |
220 |
Q |
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| T |
27418712 |
gtaaatttattgataaaacactaagagaaaacactcaagtatgagtgaaaaatcgggccaagtctgctgtgccatcccgttgaatccgcaatttccagcg |
27418613 |
T |
|
| Q |
221 |
agacgagttgaagttctgtg |
240 |
Q |
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|||||||||||||||||||| |
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| T |
27418612 |
agacgagttgaagttctgtg |
27418593 |
T |
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