View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17326_low_34 (Length: 306)
Name: NF17326_low_34
Description: NF17326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17326_low_34 |
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Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 10 - 286
Target Start/End: Complemental strand, 45768709 - 45768433
Alignment:
| Q |
10 |
tcgaagaatatacaccctgatgaacataaaagtgataagattctcgaagtagatacttggaagccacagttgaataaaaatgagaataatgtgaattcta |
109 |
Q |
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| T |
45768709 |
tcgaagaatagacaccctgatgaacataaaagtgataagattctcgaagtagatacttggaagccacagttgaataaaaatgagaataatgtgaattcta |
45768610 |
T |
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| Q |
110 |
tgtcaaatgagtctccatcaaaacattcaacaaaagctcaaaatcaaagtctctcattgaagtttcacaaagcaaaagaagaagtagcagcatcgcgcac |
209 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45768609 |
tgtcaaatgaatctccatcaaaacattcaacaaaagctcaaaatcaaagtctctcagtgaagtttcacaaagcaaaagaagaagtagcagcatcgcgcac |
45768510 |
T |
|
| Q |
210 |
tgctgataatagtccacaaacattttctgtttcttcaagaaatggaagtggtgtaagaagaaataccccctttacac |
286 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45768509 |
tgctgataatagtccacaaacattttctgcttcttcaagaaatggaagtggtgtaagaagaaataccccctttacac |
45768433 |
T |
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