View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17326_low_42 (Length: 280)
Name: NF17326_low_42
Description: NF17326
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17326_low_42 |
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Alignment Details
Target: chr6 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 4 - 264
Target Start/End: Original strand, 32346630 - 32346890
Alignment:
| Q |
4 |
atgaaatatcaaatacatgaagaaaagtgtgtgatagataaagcatctatatatcaagctcatcctttggtcaaaaccatagaagtcaaccatccattta |
103 |
Q |
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| T |
32346630 |
atgaaatatcaaatacatgaaaaaaagtgtgtgatagataaagcatctatatatcaagctcatcctttagtcaaaaccatagaagtcaaccatccattta |
32346729 |
T |
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| Q |
104 |
cctctaatcatgtaagggtatttcaataccttcaaagatagtattgggtaaatcatcattttaaaaattcactaaataatcctctaatcaaagatcttat |
203 |
Q |
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| T |
32346730 |
cctctaatcatgtaagggtatttcaataccttcaaagatagtattgggtaaatcatcattttaaaaattcactaaataatcctctaatcaaagatcttat |
32346829 |
T |
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| Q |
204 |
tctttgatggtactcttcttaattattctttatggggttattgtgtgtagaacaatggtat |
264 |
Q |
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| T |
32346830 |
tctttgatggtactcttcttaattattctttatggggttattgtgtgtagaacaatggtat |
32346890 |
T |
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